Pregenerated sensors for LINC02009 (Homo sapiens)
Ensembl gene IDs: ENSG00000283646Ensembl transcript IDs: ENST00000635852.1, ENST00000661642.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACGGAGAGCAACAGCTCACGACTAGGATTCCAGCTATGCTACTTATaGCTATCAGGGCCCAGCGTAGGCCAGAGCCCAGGGATGTCTACC | + |
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Preference number: 5 (lower is better) Translates to: TESNSSRLGFQLCYL*LSGPSVGQSPGMST Trigger: GGTAGACATCCCTGGGCTCTGGCCTACGCTGGGCCCTGATAGTCATAAGTAGCATAGCTGGAATCCTAGTCGTGAGCTGTTGCTCTCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS GCA 90 bp | ATCAGGGCCCAGCGTAGGCCAGAGCCCAGGGATGTCTACCATCTCTaGAGGGGGTCATCAGTAAGGCTCTTGACTACCTTAATCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: IRAQRRPEPRDVYHL*RGSSVRLLTTLISC Trigger: ACAGGAGATTAAGGTAGTCAAGAGCCTTACTGATGACCCCCTGCAGAGATGGTAGACATCCCTGGGCTCTGGCCTACGCTGGGCCCTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CCA 90 bp | GTCCATCGAGGCCCCTTGGTGGGGCCGCGTCTTCCACCATACCTTTaGTGTGGTGACATGTATTATGCTTACACACACTGTGACGGGTAC | + |
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Preference number: 5 (lower is better) Translates to: VHRGPLVGPRLPPYL*CGDMYYAYTHCDGY Trigger: GTACCCGTCACAGTGTGTGTAAGCATAATACATGTCACCACACCAAAGGTATGGTGGAAGACGCGGCCCCACCAAGGGGCCTCGATGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS GCA 90 bp | ATAGGGGTGGTGGCCCATGTAACAAAGCCTCCACCTGGGCTGGGCTaGTTTTCCATGGCCATTCATTCAAGGTTTGGAGCATCAGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: IGVVAHVTKPPPGLG*FSMAIHSRFGASGP Trigger: TGGACCTGATGCTCCAAACCTTGAATGAATGGCCATGGAAAAGCAGCCCAGCCCAGGTGGAGGCTTTGTTACATGGGCCACCACCCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CCA 90 bp | CTGCAGCTGCTAGAAGGGCGGTGCAGATCCAACAGTTGGAAACATTaGTCACTTCAGTGTAGGTGTGGGCCCAGTCCACAATGCAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: LQLLEGRCRSNSWKH*SLQCRCGPSPQCSW Trigger: CCAACTGCATTGTGGACTGGGCCCACACCTACACTGAAGTGACCAATGTTTCCAACTGTTGGATCTGCACCGCCCTTCTAGCAGCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CCA 90 bp | ATCCTTTGTCCAAAACTTGCCACGTTGCGTTCCAGGCATCAGCCATaGGACCCCAAGTCTCCAGCCATGTCTGGTTCTCTGCAGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: ILCPKLATLRSRHQP*DPKSPAMSGSLQML Trigger: CAGCATCTGCAGAGAACCAGACATGGCTGGAGACTTGGGGTCCCATGGCTGATGCCTGGAACGCAACGTGGCAAGTTTTGGACAAAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS TCA 90 bp | TTTGGAGCATCAGGTCCAGCCTGGAACTTCAGCCCTTGGATTTGTTaGTGGCCCAACTGCATGCTGCCAAATGTTGCCACAAGAGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: FGASGPAWNFSPWIC*WPNCMLPNVATRGV Trigger: CACCCCTCTTGTGGCAACATTTGGCAGCATGCAGTTGGGCCATCAACAAATCCAAGGGCTGAAGTTCCAGGCTGGACCTGATGCTCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661642.1 |
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| CDS CCA 90 bp | TCCACCTGGGCTGGGCTGCTTTTCCATGGCCATTCATTCAAGGTTTaGAGCATCAGGTCCAGCCTGGAACTTCAGCCCTTGGATTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: STWAGLLFHGHSFKV*SIRSSLELQPLDLL Trigger: CAACAAATCCAAGGGCTGAAGTTCCAGGCTGGACCTGATGCTCCAAACCTTGAATGAATGGCCATGGAAAAGCAGCCCAGCCCAGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661642.1 |
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| CDS CCA 90 bp | TTTACAGACAATAGAGGCTCTGAAGCAATCACGAGCTCACGTGAGTaGTCACCTAATGCACCTCAAGTGGCATGGTTCATAATGTGCGGA | + |
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Preference number: 5 (lower is better) Translates to: FTDNRGSEAITSSRE*SPNAPQVAWFIMCG Trigger: TCCGCACATTATGAACCATGCCACTTGAGGTGCATTAGGTGACCACTCACGTGAGCTCGTGATTGCTTCAGAGCCTCTATTGTCTGTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS GCA 90 bp | ACCTTAATCTCCTGTGAGACCCCTTGCAGGGCTGCTGTTATGTTCTaGCAATTGTCAGGGATAAAGGTACAACATTGTGTTCCTAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: TLISCETPCRAAVMF*QLSGIKVQHCVPKR Trigger: CCTTTTAGGAACACAATGTTGTACCTTTATCCCTGACAATTGGCAGAACATAACAGCAGCCCTGCAAGGGGTCTCACAGGAGATTAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS GCA 90 bp | TCTGGTTTCTTATTATGTCTCTACTGGGCATTCTTACATACATCTTaGACGCCATGGAAAGTTTCTCTAGGGCAGTGGTTCACAAACTTT | + |
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Preference number: 5 (lower is better) Translates to: SGFLLCLYWAFLHTS*TPWKVSLGQWFTNF Trigger: AAAGTTTGTGAACCACTGCCCTAGAGAAACTTTCCATGGCGTGCAAGATGTATGTAAGAATGCCCAGTAGAGACATAATAAGAAACCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CCA 90 bp | TTCTTACATACATCTTGCACGCCATGGAAAGTTTCTCTAGGGCAGTaGTTCACAAACTTTTTGGATACAGAATACTTTTATGTGCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: FLHTSCTPWKVSLGQ*FTNFLDTEYFYVLE Trigger: TTCAAGCACATAAAAGTATTCTGTATCCAAAAAGTTTGTGAACCACTGCCCTAGAGAAACTTTCCATGGCGTGCAAGATGTATGTAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CCA 72 bp | CTCCCAGGGGGCACACAGTCCATCGAGGCCCCTTGGTaGGGCCGCGTCTTCCACCATACCTTTGGTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LPGGTQSIEAPW*GRVFHHTFGVV Trigger: CACCACACCAAAGGTATGGTGGAAGACGCGGCCCCACCAAGGGGCCTCGATGGACTGTGTGCCCCCTGGGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS GCA 72 bp | GCTGCCTGTAGCCACTCAGTCAGGGTGTGGTCTCCTTaGGCTGCCACTAACCACCTGCTCACTTGCAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: AACSHSVRVWSP*AATNHLLTCSR Trigger: GCGGCTGCAAGTGAGCAGGTGGTTAGTGGCAGCGCAAGGAGACCACACCCTGACTGAGTGGCTACAGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635852.1 |
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| CDS CCA 72 bp | TCTTGCGTTATTTCTCCCCTGGTTCTTCCCTTGGGGTaGGCTGTCCCATGTGCCTGCCTGAGCCCACTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SCVISPLVLPLG*AVPCACLSPLA Trigger: AGCCAGTGGGCTCAGGCAGGCACATGGGACAGCCCACCCCAAGGGAAGAACCAGGGGAGAAATAACGCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS TCA 72 bp | TGGGGTATGGGGAGCCCTCTCCTGCCCTGCTCTTTCTaGCTAGCTACCCACTATAACACTCCCAGAGGGACC | + |
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Preference number: 6 (lower is better) Translates to: WGMGSPLLPCSF*LATHYNTPRGT Trigger: GGTCCCTCTGGGAGTGTTATAGTGGGTAGCTAGTCAGAAAGAGCAGGGCAGGAGAGGGCTCCCCATACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS TCA 72 bp | AGTCAACAACCGCCAGACCATCACCTGATGGTCACCTaGCACTCCTGGTGTGTGGGGTATGGGGAGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SQQPPDHHLMVT*HSWCVGYGEPS Trigger: AGAGGGCTCCCCATACCCCACACACCAGGAGTGTCAGGTGACCATCAGGTGATGGTCTGGCGGTTGTTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CCA 72 bp | GGAGTCGTGTGCCTACGCTCCAAACCCACTGAGTCATaGTGCACCAAAAAGTGGCCTCAGCCTGCTCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: GVVCLRSKPTES*CTKKWPQPAPD Trigger: GTCAGGAGCAGGCTGAGGCCACTTTTTGGTGCACCATGACTCAGTGGGTTTGGAGCGTAGGCACACGACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS TCA 72 bp | GTAGCACCTCCCAGTTATGCAGGCATCTGGGCAATGTaGGAACAGTGGCAGGTACATGAGGCCACCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VAPPSYAGIWAM*EQWQVHEATLR Trigger: CCTGAGGGTGGCCTCATGTACCTGCCACTGTTCTCACATTGCCCAGATGCCTGCATAACTGGGAGGTGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS GCA 72 bp | ACGGGTACCCATCCCACAGTGCTATTACCCCAGTGTTaGTATATGCACCACAGTGCCTGGGCCAGGGGTACT | + |
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Preference number: 6 (lower is better) Translates to: TGTHPTVLLPQC*YMHHSAWARGT Trigger: AGTACCCCTGGCCCAGGCACTGTGGTGCATATAGCAACACTGGGGTAATAGCACTGTGGGATGGGTACCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CCA 72 bp | TGGGCCAGCCAGGGAATGGCTGTGCTGTGGGTCTTGTaGCATCCTTTGTCCAAAACTTGCCACGTTGCGTTC | + |
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Preference number: 6 (lower is better) Translates to: WASQGMAVLWVL*HPLSKTCHVAF Trigger: GAACGCAACGTGGCAAGTTTTGGACAAAGGATGCCACAAGACCCACAGCACAGCCATTCCCTGGCTGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CAA 72 bp | GGCTGGGCTGCTTTTCCATGGCCATTCATTCAAGGTTaGGAGCATCAGGTCCAGCCTGGAACTTCAGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: GWAAFPWPFIQG*EHQVQPGTSAP Trigger: CGGGGCTGAAGTTCCAGGCTGGACCTGATGCTCCAAACCTTGAATGAATGGCCATGGAAAAGCAGCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635852.1 |
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| CDS TCA 72 bp | AACAGCTCACGACTAGGATTCCAGCTATGCTACTTATaGCTATCAGGGCCCAGCGTAGGCCAGAGCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: NSSRLGFQLCYL*LSGPSVGQSPG Trigger: CCCTGGGCTCTGGCCTACGCTGGGCCCTGATAGTCATAAGTAGCATAGCTGGAATCCTAGTCGTGAGCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS TCA 72 bp | GTCATGGTGCACCAAAAAGTGGCCTCAGCCTGCTCCTaGCTAAAGCGCAGCCATCTTCCTTACACTCCACCC | + |
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Preference number: 6 (lower is better) Translates to: VMVHQKVASACS*LKRSHLPYTPP Trigger: GGGTGGAGTGTAAGGAAGATGGCTGCGCTTTAGTCAGGAGCAGGCTGAGGCCACTTTTTGGTGCACCATGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS GCA 72 bp | GGTCTTGTGGCATCCTTTGTCCAAAACTTGCCACGTTaGGTTCCAGGCATCAGCCATGGGACCCCAAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GLVASFVQNLPR*VPGISHGTPSL Trigger: GAGACTTGGGGTCCCATGGCTGATGCCTGGAACGCAACGTGGCAAGTTTTGGACAAAGGATGCCACAAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS GCA 72 bp | CAGCGTAGGCCAGAGCCCAGGGATGTCTACCATCTCTaGAGGGGGTCATCAGTAAGGCTCTTGACTACCTTA | + |
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Preference number: 6 (lower is better) Translates to: QRRPEPRDVYHL*RGSSVRLLTTL Trigger: TAAGGTAGTCAAGAGCCTTACTGATGACCCCCTGCAGAGATGGTAGACATCCCTGGGCTCTGGCCTACGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS GCA 72 bp | CCTCAAGTGGCATGGTTCATAATGTGCGGAGTCGTGTaGCTACGCTCCAAACCCACTGAGTCATGGTGCACC | + |
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Preference number: 6 (lower is better) Translates to: PQVAWFIMCGVV*LRSKPTESWCT Trigger: GGTGCACCATGACTCAGTGGGTTTGGAGCGTAGGCACACGACTCCGCACATTATGAACCATGCCACTTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CCA 72 bp | GCTGGGCTGCTTTTCCATGGCCATTCATTCAAGGTTTaGAGCATCAGGTCCAGCCTGGAACTTCAGCCCCGA | + |
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Preference number: 6 (lower is better) Translates to: AGLLFHGHSFKV*SIRSSLELQPR Trigger: TCGGGGCTGAAGTTCCAGGCTGGACCTGATGCTCCAAACCTTGAATGAATGGCCATGGAAAAGCAGCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635852.1 |
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| CDS CCA 72 bp | CCCACCCATCATAAATGCTATGGGCCAGCCAGGGAATaGCTGTGCTGTGGGTCTTGTGGCATCCTTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PTHHKCYGPARE*LCCGSCGILCP Trigger: TGGACAAAGGATGCCACAAGACCCACAGCACAGCCATTCCCTGGCTGGCCCATAGCATTTATGATGGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CCA 72 bp | CTATTACCCCAGTGTTGCTATATGCACCACAGTGCCTaGGCCAGGGGTACTGCACGTTACCTCACTAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LLPQCCYMHHSA*ARGTARYLTSQ Trigger: CTGGCTAGTGAGGTAACGTGCAGTACCCCTGGCCCAGGCACTGTGGTGCATATAGCAACACTGGGGTAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS GCA 72 bp | GTGGCCCATGTAACAAAGCCTCCACCTGGGCTGGGCTaGTTTTCCATGGCCATTCATTCAAGGTTTGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: VAHVTKPPPGLG*FSMAIHSRFGA Trigger: TGCTCCAAACCTTGAATGAATGGCCATGGAAAAGCAGCCCAGCCCAGGTGGAGGCTTTGTTACATGGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CCA 72 bp | AATAGGGGTGGTGGCCCATGTAACAAAGCCTCCACCTaGGCTGGGCTGCTTTTCCATGGCCATTCATTCAAG | + |
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Preference number: 6 (lower is better) Translates to: NRGGGPCNKAST*AGLLFHGHSFK Trigger: CTTGAATGAATGGCCATGGAAAAGCAGCCCAGCCCAGGTGGAGGCTTTGTTACATGGGCCACCACCCCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CCA 72 bp | GGCCCCTTGGTGGGGCCGCGTCTTCCACCATACCTTTaGTGTGGTGACATGTATTATGCTTACACACACTGT | + |
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Preference number: 6 (lower is better) Translates to: GPLVGPRLPPYL*CGDMYYAYTHC Trigger: ACAGTGTGTGTAAGCATAATACATGTCACCACACCAAAGGTATGGTGGAAGACGCGGCCCCACCAAGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CCA 72 bp | GCTGGGCTGCTTTTCCATGGCCATTCATTCAAGGTTTaGAGCATCAGGTCCAGCCTGGAACTTCAGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: AGLLFHGHSFKV*SIRSSLELQPL Trigger: CAAGGGCTGAAGTTCCAGGCTGGACCTGATGCTCCAAACCTTGAATGAATGGCCATGGAAAAGCAGCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661642.1 |
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| CDS CAA 72 bp | GGCTGGGCTGCTTTTCCATGGCCATTCATTCAAGGTTaGGAGCATCAGGTCCAGCCTGGAACTTCAGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: GWAAFPWPFIQG*EHQVQPGTSAL Trigger: AAGGGCTGAAGTTCCAGGCTGGACCTGATGCTCCAAACCTTGAATGAATGGCCATGGAAAAGCAGCCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661642.1 |
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| CDS CAA 90 bp | GTTTGGAGCATCAGGTCCAGCCTGGAACTTCAGCCCTTGGATTTGTaGATGGCCCAACTGCATGCTGCCAAATGTTGCCACAAGAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: VWSIRSSLELQPLDL*MAQLHAAKCCHKRG Trigger: ACCCCTCTTGTGGCAACATTTGGCAGCATGCAGTTGGGCCATCAACAAATCCAAGGGCTGAAGTTCCAGGCTGGACCTGATGCTCCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661642.1 |
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| CDS CAA 90 bp | CTCCACCTGGGCTGGGCTGCTTTTCCATGGCCATTCATTCAAGGTTaGGAGCATCAGGTCCAGCCTGGAACTTCAGCCCTTGGATTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LHLGWAAFPWPFIQG*EHQVQPGTSALGFV Trigger: AACAAATCCAAGGGCTGAAGTTCCAGGCTGGACCTGATGCTCCAAACCTTGAATGAATGGCCATGGAAAAGCAGCCCAGCCCAGGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661642.1 |
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| CDS TCA 72 bp | CCAAGTCTCCAGCCATGTCTGGTTCTCTGCAGATGCTaGATGTATGTGCTAAGGCAAGCCATCTGCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PSLQPCLVLCRC*MYVLRQAICSC Trigger: GCAGCTGCAGATGGCTTGCCTTAGCACATACATTCAGCATCTGCAGAGAACCAGACATGGCTGGAGACTTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS TCA 72 bp | TCAGGTCCAGCCTGGAACTTCAGCCCTTGGATTTGTTaGTGGCCCAACTGCATGCTGCCAAATGTTGCCACA | + |
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Preference number: 6 (lower is better) Translates to: SGPAWNFSPWIC*WPNCMLPNVAT Trigger: TGTGGCAACATTTGGCAGCATGCAGTTGGGCCATCAACAAATCCAAGGGCTGAAGTTCCAGGCTGGACCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661642.1 |
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| CDS GCA 72 bp | GCTAAGGCAAGCCATCTGCAGCTGCTAGAAGGGCGGTaGAGATCCAACAGTTGGAAACATTGGTCACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: AKASHLQLLEGR*RSNSWKHWSLQ Trigger: CTGAAGTGACCAATGTTTCCAACTGTTGGATCTGCACCGCCCTTCTAGCAGCTGCAGATGGCTTGCCTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CCA 72 bp | CTAGAAGGGCGGTGCAGATCCAACAGTTGGAAACATTaGTCACTTCAGTGTAGGTGTGGGCCCAGTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: LEGRCRSNSWKH*SLQCRCGPSPQ Trigger: TTGTGGACTGGGCCCACACCTACACTGAAGTGACCAATGTTTCCAACTGTTGGATCTGCACCGCCCTTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CAA 72 bp | CAGAGCCTGAGCAGCATGCTCTGCAAGAGCAGTAACTaGGCTTCTACAGTTGTGACACACACTCCAGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: QSLSSMLCKSSN*ASTVVTHTPGL Trigger: TAGCCCTGGAGTGTGTGTCACAACTGTAGAAGCCAAGTTACTGCTCTTGCAGAGCATGCTGCTCAGGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CAA 72 bp | GTCTACCATCTCTGCAGGGGGTCATCAGTAAGGCTCTaGACTACCTTAATCTCCTGTGAGACCCCTTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VYHLCRGSSVRL*TTLISCETPCR Trigger: CCTGCAAGGGGTCTCACAGGAGATTAAGGTAGTCAAGAGCCTTACTGATGACCCCCTGCAGAGATGGTAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CAA 72 bp | ATCAGGTCCAGCCTGGAACTTCAGCCCTTGGATTTGTaGATGGCCCAACTGCATGCTGCCAAATGTTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: IRSSLELQPLDL*MAQLHAAKCCH Trigger: GTGGCAACATTTGGCAGCATGCAGTTGGGCCATCAACAAATCCAAGGGCTGAAGTTCCAGGCTGGACCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661642.1 |
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| CDS CAA 72 bp | AGCATCAGGTCCAGCCTGGAACTTCAGCCCTTGGATTaGTTGATGGCCCAACTGCATGCTGCCAAATGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SIRSSLELQPLD*LMAQLHAAKCC Trigger: GCAACATTTGGCAGCATGCAGTTGGGCCATCAACAAATCCAAGGGCTGAAGTTCCAGGCTGGACCTGATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661642.1 |
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| CDS CAA 90 bp | TGGCAGGTACATGAGGCCACCCTCAGGTATAATGTCCAGTCCAGTTaGCTTATAGGTAAGGCCACCCTGTGTCCCCACAGACCCATAAAC | + |
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Preference number: 6 (lower is better) Translates to: WQVHEATLRYNVQSS*LIGKATLCPHRPIN Trigger: GTTTATGGGTCTGTGGGGACACAGGGTGGCCTTACCTATAAGCAAACTGGACTGGACATTATACCTGAGGGTGGCCTCATGTACCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CAA 90 bp | AAGGTTTGGAGCATCAGGTCCAGCCTGGAACTTCAGCCCTTGGATTaGTTGATGGCCCAACTGCATGCTGCCAAATGTTGCCACAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: KVWSIRSSLELQPLD*LMAQLHAAKCCHKR Trigger: CCTCTTGTGGCAACATTTGGCAGCATGCAGTTGGGCCATCAACAAATCCAAGGGCTGAAGTTCCAGGCTGGACCTGATGCTCCAAACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661642.1 |
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| CDS CAA 90 bp | TCATTCAAGGTTTGGAGCATCAGGTCCAGCCTGGAACTTCAGCCCTaGGATTTGTTGATGGCCCAACTGCATGCTGCCAAATGTTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SFKVWSIRSSLELQP*DLLMAQLHAAKCCH Trigger: GTGGCAACATTTGGCAGCATGCAGTTGGGCCATCAACAAATCCAAGGGCTGAAGTTCCAGGCTGGACCTGATGCTCCAAACCTTGAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661642.1 |
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| CDS CAA 72 bp | CCCAAGAATTTAGCAGGTAATCCAGGCCCTCGGACCTaGGATTTGTTGATGGCCCAACTGCATGCTGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: PKNLAGNPGPRT*DLLMAQLHAAK Trigger: TTTGGCAGCATGCAGTTGGGCCATCAACAAATCCAAGGTCCGAGGGCCTGGATTACCTGCTAAATTCTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635852.1 |
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| CDS GCA 72 bp | CATCATAAATGCTATGGGCCAGCCAGGGAATGGCTGTaGTGTGGGTCTTGTGGCATCCTTTGTCCAAAACTT | + |
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Preference number: 6 (lower is better) Translates to: HHKCYGPAREWL*CGSCGILCPKL Trigger: AAGTTTTGGACAAAGGATGCCACAAGACCCACAGCACAGCCATTCCCTGGCTGGCCCATAGCATTTATGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CAA 90 bp | ATCTCCTGTGAGACCCCTTGCAGGGCTGCTGTTATGTTCTGCCAATaGTCAGGGATAAAGGTACAACATTGTGTTCCTAAAAGGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: ISCETPCRAAVMFCQ*SGIKVQHCVPKRAQ Trigger: CTGTGCCCTTTTAGGAACACAATGTTGTACCTTTATCCCTGACAATTGGCAGAACATAACAGCAGCCCTGCAAGGGGTCTCACAGGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CAA 72 bp | GAGACCCCTTGCAGGGCTGCTGTTATGTTCTGCCAATaGTCAGGGATAAAGGTACAACATTGTGTTCCTAAA | + |
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Preference number: 6 (lower is better) Translates to: ETPCRAAVMFCQ*SGIKVQHCVPK Trigger: TTTAGGAACACAATGTTGTACCTTTATCCCTGACAATTGGCAGAACATAACAGCAGCCCTGCAAGGGGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS TCA 72 bp | ATGCTCCATTCACTCCTTTATGACACTTGCAAAAACTaGGAACATAACGCCTCCCAGTTAAGCAGGCATCTG | + |
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Preference number: 6 (lower is better) Translates to: MLHSLLYDTCKN*EHNASQLSRHL Trigger: CAGATGCCTGCTTAACTGGGAGGCGTTATGTTCTCAGTTTTTGCAAGTGTCATAAAGGAGTGAATGGAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS GCA 72 bp | TTATTATGTCTCTACTGGGCATTCTTACATACATCTTaGACGCCATGGAAAGTTTCTCTAGGGCAGTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LLCLYWAFLHTS*TPWKVSLGQWF Trigger: GAACCACTGCCCTAGAGAAACTTTCCATGGCGTGCAAGATGTATGTAAGAATGCCCAGTAGAGACATAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CAA 72 bp | CTTATTATGTCTCTACTGGGCATTCTTACATACATCTaGCACGCCATGGAAAGTTTCTCTAGGGCAGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LIMSLLGILTYI*HAMESFSRAVV Trigger: AACCACTGCCCTAGAGAAACTTTCCATGGCGTGCAAGATGTATGTAAGAATGCCCAGTAGAGACATAATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CAA 72 bp | AGTGTTTTCTATCTATTAGGAGCCGGCTTTTCCCTGTaGCCGGGTGTGACCAATTATTACTTTAGAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: SVFYLLGAGFSL*PGVTNYYFRKT Trigger: TGTCTTTCTAAAGTAATAATTGGTCACACCCGGCAACAGGGAAAAGCCGGCTCCTAATAGATAGAAAACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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| CDS CAA 90 bp | TTCTGGTTTCTTATTATGTCTCTACTGGGCATTCTTACATACATCTaGCACGCCATGGAAAGTTTCTCTAGGGCAGTGGTTCACAAACTT | + |
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Preference number: 6 (lower is better) Translates to: FWFLIMSLLGILTYI*HAMESFSRAVVHKL Trigger: AAGTTTGTGAACCACTGCCCTAGAGAAACTTTCCATGGCGTGCAAGATGTATGTAAGAATGCCCAGTAGAGACATAATAAGAAACCAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635852.1 ENST00000661642.1 |
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