Pregenerated sensors for LINC02004 (Homo sapiens)

Ensembl gene IDs: ENSG00000240006

Ensembl transcript IDs: ENST00000482019.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CTCTCGCTGGCACTGGCTGTGGCAGGCTGCCTGGGAATGCGGACCTaGGAAGCAGGGCTCGAGGGTTGGGGCAGGTGGGACAAGAGCTTC	+
Preference number: 5 (lower is better) Translates to: LSLALAVAGCLGMRT*EAGLEGWGRWDKSF Trigger: GAAGCTCTTGTCCCACCTGCCCCAACCCTCGAGCCCTGCTTCCCAGGTCCGCATTCCCAGGCAGCCTGCCACAGCCAGTGCCAGCGAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482019.1
CDS GCA 90 bp	GAGGGTTGGGGCAGGTGGGACAAGAGCTTCATCTCTGACTCACTGTaGTGCTCTGGGCATGGTGGCGAGGCCTCCTCCCGGGGGCTTGGG	+
Preference number: 5 (lower is better) Translates to: EGWGRWDKSFISDSL*CSGHGGEASSRGLG Trigger: CCCAAGCCCCCGGGAGGAGGCCTCGCCACCATGCCCAGAGCAGCACAGTGAGTCAGAGATGAAGCTCTTGTCCCACCTGCCCCAACCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482019.1
CDS CCA 90 bp	CAGTGCTGGGCTATCCTGAAGCCTGATCCACTCTCTCGCTGGCACTaGCTGTGGCAGGCTGCCTGGGAATGCGGACCTGGGAAGCAGGGC	+
Preference number: 5 (lower is better) Translates to: QCWAILKPDPLSRWH*LWQAAWECGPGKQG Trigger: GCCCTGCTTCCCAGGTCCGCATTCCCAGGCAGCCTGCCACAGCCAGTGCCAGCGAGAGAGTGGATCAGGCTTCAGGATAGCCCAGCACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482019.1
CDS CCA 90 bp	GCAGGCTGCCTGGGAATGCGGACCTGGGAAGCAGGGCTCGAGGGTTaGGGCAGGTGGGACAAGAGCTTCATCTCTGACTCACTGTGCTGC	+
Preference number: 5 (lower is better) Translates to: AGCLGMRTWEAGLEG*GRWDKSFISDSLCC Trigger: GCAGCACAGTGAGTCAGAGATGAAGCTCTTGTCCCACCTGCCCCAACCCTCGAGCCCTGCTTCCCAGGTCCGCATTCCCAGGCAGCCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482019.1
CDS CCA 90 bp	TGTCCTCAGTGCTGGGCTATCCTGAAGCCTGATCCACTCTCTCGCTaGCACTGGCTGTGGCAGGCTGCCTGGGAATGCGGACCTGGGAAG	+
Preference number: 5 (lower is better) Translates to: CPQCWAILKPDPLSR*HWLWQAAWECGPGK Trigger: CTTCCCAGGTCCGCATTCCCAGGCAGCCTGCCACAGCCAGTGCCAGCGAGAGAGTGGATCAGGCTTCAGGATAGCCCAGCACTGAGGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482019.1
CDS CCA 72 bp	CCACTCTCTCGCTGGCACTGGCTGTGGCAGGCTGCCTaGGAATGCGGACCTGGGAAGCAGGGCTCGAGGGTT	+
Preference number: 6 (lower is better) Translates to: PLSRWHWLWQAA*ECGPGKQGSRV Trigger: AACCCTCGAGCCCTGCTTCCCAGGTCCGCATTCCCAGGCAGCCTGCCACAGCCAGTGCCAGCGAGAGAGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482019.1
CDS GCA 72 bp	AGGTGGGACAAGAGCTTCATCTCTGACTCACTGTGCTaGTCTGGGCATGGTGGCGAGGCCTCCTCCCGGGGG	+
Preference number: 6 (lower is better) Translates to: RWDKSFISDSLC*SGHGGEASSRG Trigger: CCCCCGGGAGGAGGCCTCGCCACCATGCCCAGAGCAGCACAGTGAGTCAGAGATGAAGCTCTTGTCCCACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482019.1
CDS CCA 72 bp	CTGGGAATGCGGACCTGGGAAGCAGGGCTCGAGGGTTaGGGCAGGTGGGACAAGAGCTTCATCTCTGACTCA	+
Preference number: 6 (lower is better) Translates to: LGMRTWEAGLEG*GRWDKSFISDS Trigger: TGAGTCAGAGATGAAGCTCTTGTCCCACCTGCCCCAACCCTCGAGCCCTGCTTCCCAGGTCCGCATTCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482019.1

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