Pregenerated sensors for LINC02003 (Homo sapiens)
Ensembl gene IDs: ENSG00000264026Ensembl transcript IDs: ENST00000577573.1, ENST00000656431.1, ENST00000663290.1, ENST00000664653.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGGCTCGCACTCTGGAGATCCTTGAGCGGTTCCTCCATCCCCGGTaGCTGCTGAGAGCAGCACAAATCGGCTCAGCTGGTGCTGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: QARTLEILERFLHPR*LLRAAQIGSAGAVC Trigger: GCACACAGCACCAGCTGAGCCGATTTGTGCTGCTCTCAGCAGCCACCGGGGATGGAGGAACCGCTCAAGGATCTCCAGAGTGCGAGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS TCA 90 bp | GCACTCTGGAGATCCTTGAGCGGTTCCTCCATCCCCGGTGGCTGCTaGGAGCAGCACAAATCGGCTCAGCTGGTGCTGTGTGCACGTGTG | + |
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Preference number: 5 (lower is better) Translates to: ALWRSLSGSSIPGGC*EQHKSAQLVLCARV Trigger: CACACGTGCACACAGCACCAGCTGAGCCGATTTGTGCTGCTCTCAGCAGCCACCGGGGATGGAGGAACCGCTCAAGGATCTCCAGAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS GCA 90 bp | CGGTGGCTGCTGAGAGCAGCACAAATCGGCTCAGCTGGTGCTGTGTaGACGTGTGCGCCTTTCCGTCTGGAAAGTTCTCAGGCTGGGCGA | + |
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Preference number: 5 (lower is better) Translates to: RWLLRAAQIGSAGAV*TCAPFRLESSQAGR Trigger: TCGCCCAGCCTGAGAACTTTCCAGACGGAAAGGCGCACACGTGCACACAGCACCAGCTGAGCCGATTTGTGCTGCTCTCAGCAGCCACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS GCA 90 bp | GCCATCAGCTCCAGGAGCCTGCCCAGCTGTCTCGATTGGGTCACCTaGTGGAATTCCCCACTAGTGACGACTTCTCCTCGCAGGTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: AISSRSLPSCLDWVT*WNSPLVTTSPRRCL Trigger: CAAGCACCTGCGAGGAGAAGTCGTCACTAGTGGGGAATTCCAGCAGGTGACCCAATCGAGACAGCTGGGCAGGCTCCTGGAGCTGATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577573.1 ENST00000664653.1 |
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| CDS CCA 90 bp | CCTCCATCCCCGGTGGCTGCTGAGAGCAGCACAAATCGGCTCAGCTaGTGCTGTGTGCACGTGTGCGCCTTTCCGTCTGGAAAGTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: PPSPVAAESSTNRLS*CCVHVCAFPSGKFS Trigger: TGAGAACTTTCCAGACGGAAAGGCGCACACGTGCACACAGCACCAGCTGAGCCGATTTGTGCTGCTCTCAGCAGCCACCGGGGATGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CCA 90 bp | CCTTCCCAAGCCATCAGCTCCAGGAGCCTGCCCAGCTGTCTCGATTaGGTCACCTGCTGGAATTCCCCACTAGTGACGACTTCTCCTCGC | + |
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Preference number: 5 (lower is better) Translates to: PSQAISSRSLPSCLD*VTCWNSPLVTTSPR Trigger: GCGAGGAGAAGTCGTCACTAGTGGGGAATTCCAGCAGGTGACCCAATCGAGACAGCTGGGCAGGCTCCTGGAGCTGATGGCTTGGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577573.1 ENST00000664653.1 |
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| CDS TCA 90 bp | GTTGGGCAACTTTGTCCCGAACCAGGCTCGCACTCTGGAGATCCTTaGGCGGTTCCTCCATCCCCGGTGGCTGCTGAGAGCAGCACAAAT | + |
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Preference number: 5 (lower is better) Translates to: VGQLCPEPGSHSGDP*AVPPSPVAAESSTN Trigger: ATTTGTGCTGCTCTCAGCAGCCACCGGGGATGGAGGAACCGCTCAAGGATCTCCAGAGTGCGAGCCTGGTTCGGGACAAAGTTGCCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS GCA 90 bp | GCGGGGGCGGGGGAGATGACATCATATCCTCACCAGCGGATTGGCTaGTTGCAGGCTTCAGGAATGATATCATCTCGGCTTGTGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: AGAGEMTSYPHQRIG*LQASGMISSRLVPP Trigger: GGGAGGCACAAGCCGAGATGATATCATTCCTGAAGCCTGCAAGCAGCCAATCCGCTGGTGAGGATATGATGTCATCTCCCCCGCCCCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000656431.1 |
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| CDS TCA 90 bp | CCATCTGCAGGTGCTGCTACTGTGTTGTGGGCTTGTCCTTGGGAATaGACAGTAGACTGGAGACAGAGTCCTAGGCATAGCCCCAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: PSAGAATVLWACPWE*TVDWRQSPRHSPRV Trigger: GACTCTGGGGCTATGCCTAGGACTCTGTCTCCAGTCTACTGTTCATTCCCAAGGACAAGCCCACAACACAGTAGCAGCACCTGCAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CCA 90 bp | CTCCTTTTTATGCATAGTTTAAGGGGAGGGAGAACAGCTCTGGCCTaGTCCAAGCCATTGCACACACTGTCCTTGTGGCCTGGACTCCCG | + |
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Preference number: 5 (lower is better) Translates to: LLFMHSLRGGRTALA*SKPLHTLSLWPGLP Trigger: CGGGAGTCCAGGCCACAAGGACAGTGTGTGCAATGGCTTGGACCAGGCCAGAGCTGTTCTCCCTCCCCTTAAACTATGCATAAAAAGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS GCA 90 bp | AAACATCCTTCTTCATTTACGGTCTTTGTTCTTGCTCAGTCAGTGTaGTGTGCAGCAGGGTGGCCTTCCAGGCGCATGCTCCCATCTGCG | + |
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Preference number: 5 (lower is better) Translates to: KHPSSFTVFVLAQSV*CAAGWPSRRMLPSA Trigger: CGCAGATGGGAGCATGCGCCTGGAAGGCCACCCTGCTGCACAGCACACTGACTGAGCAAGAACAAAGACCGTAAATGAAGAAGGATGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000577573.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS GCA 90 bp | GTCACCTGCTGGAATTCCCCACTAGTGACGACTTCTCCTCGCAGGTaGTTGAGGAAGGCAAGACCTGCACAGGTTGCATTTCGGGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: VTCWNSPLVTTSPRR*LRKARPAQVAFREN Trigger: ATTTTCCCGAAATGCAACCTGTGCAGGTCTTGCCTTCCTCAAGCACCTGCGAGGAGAAGTCGTCACTAGTGGGGAATTCCAGCAGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577573.1 |
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| CDS CCA 90 bp | GTGCCGGGTTCATACAGCCTCCATACAACCAAGCCCCTGCCTTCCTaGGGCTTCCATAGGGAAGATTTAAGTTTACAGCCTCAGTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: VPGSYSLHTTKPLPS*GFHREDLSLQPQSP Trigger: AGGAGACTGAGGCTGTAAACTTAAATCTTCCCTATGGAAGCCCCAGGAAGGCAGGGGCTTGGTTGTATGGAGGCTGTATGAACCCGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656431.1 |
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| CDS GCA 90 bp | AGGAGCAGAATGCAAACATCCTTCTTCATTTACGGTCTTTGTTCTTaGTCAGTCAGTGTGCTGTGCAGCAGGGTGGCCTTCCAGGCGCAT | + |
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Preference number: 5 (lower is better) Translates to: RSRMQTSFFIYGLCS*SVSVLCSRVAFQAH Trigger: ATGCGCCTGGAAGGCCACCCTGCTGCACAGCACACTGACTGAGCAAGAACAAAGACCGTAAATGAAGAAGGATGTTTGCATTCTGCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000577573.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS GCA 90 bp | GACTTCTCCTCGCAGGTGCTTGAGGAAGGCAAGACCTGCACAGGTTaGATTTCGGGAAAATCACTCATGATCGATCCTCATTTCCCCATT | + |
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Preference number: 5 (lower is better) Translates to: DFSSQVLEEGKTCTG*ISGKSLMIDPHFPI Trigger: AATGGGGAAATGAGGATCGATCATGAGTGATTTTCCCGAAATGCAACCTGTGCAGGTCTTGCCTTCCTCAAGCACCTGCGAGGAGAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577573.1 |
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| CDS GCA 90 bp | ACTAGTGACGACTTCTCCTCGCAGGTGCTTGAGGAAGGCAAGACCTaGACAGGTTGCATTTCGGGAAAATCACTCATGATCGATCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: TSDDFSSQVLEEGKT*TGCISGKSLMIDPH Trigger: ATGAGGATCGATCATGAGTGATTTTCCCGAAATGCAACCTGTGCAGGTCTTGCCTTCCTCAAGCACCTGCGAGGAGAAGTCGTCACTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577573.1 |
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| CDS TCA 90 bp | AGGAAGGCAAGACCTGCACAGGTTGCATTTCGGGAAAATCACTCATaGTCGATCCTCATTTCCCCATTGAACCATCAGAACACACACAGT | + |
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Preference number: 5 (lower is better) Translates to: RKARPAQVAFRENHS*SILISPLNHQNTHS Trigger: ACTGTGTGTGTTCTGATGGTTCAATGGGGAAATGAGGATCGATCATGAGTGATTTTCCCGAAATGCAACCTGTGCAGGTCTTGCCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577573.1 |
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| CDS TCA 90 bp | CTCATAGAAATGGGGATGGAGACCATCATAAACTCATTCCAACAATaGCATTACTTATGCAGAAAGCGGCAAACAGGTGACATTGAGATC | + |
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Preference number: 5 (lower is better) Translates to: LIEMGMETIINSFQQ*HYLCRKRQTGDIEI Trigger: GATCTCAATGTCACCTGTTTGCCGCTTTCTGCATAAGTAATGTCATTGTTGGAATGAGTTTATGATGGTCTCCATCCCCATTTCTATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CCA 90 bp | GAAATACAGCTGTGCTTTCAAAATATCGAGGCTTCTTCTGGTCACTaGGCTAAGCACAAGTGGAAAATACATTGTCTAAGTTCAATCAAT | + |
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Preference number: 5 (lower is better) Translates to: EIQLCFQNIEASSGH*AKHKWKIHCLSSIN Trigger: ATTGATTGAACTTAGACAATGTATTTTCCACTTGTGCTTAGCCCAGTGACCAGAAGAAGCCTCGATATTTTGAAAGCACAGCTGTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664653.1 |
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| CDS TCA 72 bp | CTTTGTCCCGAACCAGGCTCGCACTCTGGAGATCCTTaGGCGGTTCCTCCATCCCCGGTGGCTGCTGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LCPEPGSHSGDP*AVPPSPVAAES Trigger: GCTCTCAGCAGCCACCGGGGATGGAGGAACCGCTCAAGGATCTCCAGAGTGCGAGCCTGGTTCGGGACAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CCA 72 bp | CCGGTGGCTGCTGAGAGCAGCACAAATCGGCTCAGCTaGTGCTGTGTGCACGTGTGCGCCTTTCCGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PVAAESSTNRLS*CCVHVCAFPSG Trigger: TCCAGACGGAAAGGCGCACACGTGCACACAGCACCAGCTGAGCCGATTTGTGCTGCTCTCAGCAGCCACCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CCA 72 bp | GGTTGGGCAACTTTGTCCCGAACCAGGCTCGCACTCTaGAGATCCTTGAGCGGTTCCTCCATCCCCGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GWATLSRTRLAL*RSLSGSSIPGG Trigger: GCCACCGGGGATGGAGGAACCGCTCAAGGATCTCCAGAGTGCGAGCCTGGTTCGGGACAAAGTTGCCCAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS TCA 72 bp | AGATCCTTGAGCGGTTCCTCCATCCCCGGTGGCTGCTaGGAGCAGCACAAATCGGCTCAGCTGGTGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: RSLSGSSIPGGC*EQHKSAQLVLC Trigger: ACACAGCACCAGCTGAGCCGATTTGTGCTGCTCTCAGCAGCCACCGGGGATGGAGGAACCGCTCAAGGATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS GCA 72 bp | TCCAGGAGCCTGCCCAGCTGTCTCGATTGGGTCACCTaGTGGAATTCCCCACTAGTGACGACTTCTCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: SRSLPSCLDWVT*WNSPLVTTSPR Trigger: GCGAGGAGAAGTCGTCACTAGTGGGGAATTCCAGCAGGTGACCCAATCGAGACAGCTGGGCAGGCTCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577573.1 ENST00000664653.1 |
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| CDS CCA 72 bp | ACTCTGGAGATCCTTGAGCGGTTCCTCCATCCCCGGTaGCTGCTGAGAGCAGCACAAATCGGCTCAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: TLEILERFLHPR*LLRAAQIGSAG Trigger: ACCAGCTGAGCCGATTTGTGCTGCTCTCAGCAGCCACCGGGGATGGAGGAACCGCTCAAGGATCTCCAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CCA 72 bp | GCCATCAGCTCCAGGAGCCTGCCCAGCTGTCTCGATTaGGTCACCTGCTGGAATTCCCCACTAGTGACGACT | + |
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Preference number: 6 (lower is better) Translates to: AISSRSLPSCLD*VTCWNSPLVTT Trigger: AGTCGTCACTAGTGGGGAATTCCAGCAGGTGACCCAATCGAGACAGCTGGGCAGGCTCCTGGAGCTGATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577573.1 ENST00000664653.1 |
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| CDS CAA 72 bp | GTCCTAGGCATAGCCCCAGAGTCACTGGTGACTCTGTaGGTCATTGGGCTGGTCCTGTCCCTTCTCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: VLGIAPESLVTL*VIGLVLSLLWA Trigger: GGCCCAGAGAAGGGACAGGACCAGCCCAATGACCAACAGAGTCACCAGTGACTCTGGGGCTATGCCTAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CAA 72 bp | AGCCATCAGCTCCAGGAGCCTGCCCAGCTGTCTCGATaGGGTCACCTGCTGGAATTCCCCACTAGTGACGAC | + |
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Preference number: 6 (lower is better) Translates to: SHQLQEPAQLSR*GHLLEFPTSDD Trigger: GTCGTCACTAGTGGGGAATTCCAGCAGGTGACCCAATCGAGACAGCTGGGCAGGCTCCTGGAGCTGATGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577573.1 ENST00000664653.1 |
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| CDS CAA 90 bp | TCCTTCCCAAGCCATCAGCTCCAGGAGCCTGCCCAGCTGTCTCGATaGGGTCACCTGCTGGAATTCCCCACTAGTGACGACTTCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: SFPSHQLQEPAQLSR*GHLLEFPTSDDFSS Trigger: CGAGGAGAAGTCGTCACTAGTGGGGAATTCCAGCAGGTGACCCAATCGAGACAGCTGGGCAGGCTCCTGGAGCTGATGGCTTGGGAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577573.1 ENST00000664653.1 |
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| CDS CAA 90 bp | GGAGACAGAGTCCTAGGCATAGCCCCAGAGTCACTGGTGACTCTGTaGGTCATTGGGCTGGTCCTGTCCCTTCTCTGGGCCTTGATGTCC | + |
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Preference number: 6 (lower is better) Translates to: GDRVLGIAPESLVTL*VIGLVLSLLWALMS Trigger: GGACATCAAGGCCCAGAGAAGGGACAGGACCAGCCCAATGACCAACAGAGTCACCAGTGACTCTGGGGCTATGCCTAGGACTCTGTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS TCA 72 bp | GCCATGGCTTGTTTGCTTCTCCCGGGAGCCTGGCACTaGGCCCTAGATGCTGTCATTGTCTTGGGGACAGAC | + |
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Preference number: 6 (lower is better) Translates to: AMACLLLPGAWH*ALDAVIVLGTD Trigger: GTCTGTCCCCAAGACAATGACAGCATCTAGGGCTCAGTGCCAGGCTCCCGGGAGAAGCAAACAAGCCATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS GCA 72 bp | CTGAGAGCAGCACAAATCGGCTCAGCTGGTGCTGTGTaGACGTGTGCGCCTTTCCGTCTGGAAAGTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LRAAQIGSAGAV*TCAPFRLESSQ Trigger: CTGAGAACTTTCCAGACGGAAAGGCGCACACGTGCACACAGCACCAGCTGAGCCGATTTGTGCTGCTCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS GCA 72 bp | CAGTGTGCTGTGCAGCAGGGTGGCCTTCCAGGCGCATaGTCCCATCTGCGTTATCTCTTTGAAGGCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: QCAVQQGGLPGA*SHLRYLFEGLF Trigger: GAAAAGGCCTTCAAAGAGATAACGCAGATGGGAGCATGCGCCTGGAAGGCCACCCTGCTGCACAGCACACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664653.1 |
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| CDS CCA 72 bp | CATAGCCCCAGAGTCACTGGTGACTCTGTTGGTCATTaGGCTGGTCCTGTCCCTTCTCTGGGCCTTGATGTC | + |
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Preference number: 6 (lower is better) Translates to: HSPRVTGDSVGH*AGPVPSLGLDV Trigger: GACATCAAGGCCCAGAGAAGGGACAGGACCAGCCCAATGACCAACAGAGTCACCAGTGACTCTGGGGCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CAA 72 bp | CTCCTTACGTGGCTCACACCACTAGGTTGGGCAACTTaGTCCCGAACCAGGCTCGCACTCTGGAGATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LLTWLTPLGWAT*SRTRLALWRSL Trigger: CAAGGATCTCCAGAGTGCGAGCCTGGTTCGGGACAAAGTTGCCCAACCTAGTGGTGTGAGCCACGTAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CAA 72 bp | GCTCTGGCCTGGTCCAAGCCATTGCACACACTGTCCTaGTGGCCTGGACTCCCGGGAACATTTCTGGCATTT | + |
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Preference number: 6 (lower is better) Translates to: ALAWSKPLHTLS*WPGLPGTFLAF Trigger: AAATGCCAGAAATGTTCCCGGGAGTCCAGGCCACAAGGACAGTGTGTGCAATGGCTTGGACCAGGCCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CCA 72 bp | GGCGGGGGAGATGACATCATATCCTCACCAGCGGATTaGCTGCTTGCAGGCTTCAGGAATGATATCATCTCG | + |
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Preference number: 6 (lower is better) Translates to: GGGDDIISSPAD*LLAGFRNDIIS Trigger: CGAGATGATATCATTCCTGAAGCCTGCAAGCAGCCAATCCGCTGGTGAGGATATGATGTCATCTCCCCCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656431.1 |
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| CDS CAA 90 bp | ACCTGCTGGAATTCCCCACTAGTGACGACTTCTCCTCGCAGGTGCTaGAGGAAGGCAAGACCTGCACAGGTTGCATTTCGGGAAAATCAC | + |
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Preference number: 6 (lower is better) Translates to: TCWNSPLVTTSPRRC*RKARPAQVAFRENH Trigger: GTGATTTTCCCGAAATGCAACCTGTGCAGGTCTTGCCTTCCTCAAGCACCTGCGAGGAGAAGTCGTCACTAGTGGGGAATTCCAGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577573.1 |
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| CDS TCA 72 bp | GGTGCTGCTACTGTGTTGTGGGCTTGTCCTTGGGAATaGACAGTAGACTGGAGACAGAGTCCTAGGCATAGC | + |
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Preference number: 6 (lower is better) Translates to: GAATVLWACPWE*TVDWRQSPRHS Trigger: GCTATGCCTAGGACTCTGTCTCCAGTCTACTGTTCATTCCCAAGGACAAGCCCACAACACAGTAGCAGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CAA 90 bp | GAGGAGCAGAATGCAAACATCCTTCTTCATTTACGGTCTTTGTTCTaGCTCAGTCAGTGTGCTGTGCAGCAGGGTGGCCTTCCAGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: EEQNANILLHLRSLF*LSQCAVQQGGLPGA Trigger: TGCGCCTGGAAGGCCACCCTGCTGCACAGCACACTGACTGAGCAAGAACAAAGACCGTAAATGAAGAAGGATGTTTGCATTCTGCTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000577573.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CAA 90 bp | GCAAGCGAGGAGCAGAATGCAAACATCCTTCTTCATTTACGGTCTTaGTTCTTGCTCAGTCAGTGTGCTGTGCAGCAGGGTGGCCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ASEEQNANILLHLRS*FLLSQCAVQQGGLP Trigger: TGGAAGGCCACCCTGCTGCACAGCACACTGACTGAGCAAGAACAAAGACCGTAAATGAAGAAGGATGTTTGCATTCTGCTCCTCGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000577573.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS GCA 72 bp | GACTTCTCCTCGCAGGTGCTTGAGGAAGGCAAGACCTaGACAGGTTGCATTTCGGGAAAATCACTCATGATC | + |
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Preference number: 6 (lower is better) Translates to: DFSSQVLEEGKT*TGCISGKSLMI Trigger: GATCATGAGTGATTTTCCCGAAATGCAACCTGTGCAGGTCTTGCCTTCCTCAAGCACCTGCGAGGAGAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577573.1 |
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| CDS GCA 72 bp | GGGGAGATGACATCATATCCTCACCAGCGGATTGGCTaGTTGCAGGCTTCAGGAATGATATCATCTCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GEMTSYPHQRIG*LQASGMISSRL Trigger: AAGCCGAGATGATATCATTCCTGAAGCCTGCAAGCAGCCAATCCGCTGGTGAGGATATGATGTCATCTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656431.1 |
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| CDS CAA 72 bp | CTTTCCATCTGCAGGTGCTGCTACTGTGTTGTGGGCTaGTCCTTGGGAATGAACAGTAGACTGGAGACAGAG | + |
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Preference number: 6 (lower is better) Translates to: LSICRCCYCVVG*SLGMNSRLETE Trigger: CTCTGTCTCCAGTCTACTGTTCATTCCCAAGGACAAGCCCACAACACAGTAGCAGCACCTGCAGATGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS GCA 72 bp | TCGCAGGTGCTTGAGGAAGGCAAGACCTGCACAGGTTaGATTTCGGGAAAATCACTCATGATCGATCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SQVLEEGKTCTG*ISGKSLMIDPH Trigger: ATGAGGATCGATCATGAGTGATTTTCCCGAAATGCAACCTGTGCAGGTCTTGCCTTCCTCAAGCACCTGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577573.1 |
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| CDS CAA 72 bp | GGGCCGATCTGCAGACATTTCATTCACAACTTGTTGTaGGTCAGTATTTCTCTTCCAAGGGAGGCGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GPICRHFIHNLL*VSISLPREAEV Trigger: CACCTCCGCCTCCCTTGGAAGAGAAATACTGACCAACAACAAGTTGTGAATGAAATGTCTGCAGATCGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CAA 72 bp | CACAGTTCCCTTTGGGGTGAGGAAGAGGTGGAAACCTaGCCAGAACAGGTCTCCAAAGTTTCCTGTTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: HSSLWGEEEVET*PEQVSKVSCFQ Trigger: CTGAAAACAGGAAACTTTGGAGACCTGTTCTGGCAAGGTTTCCACCTCTTCCTCACCCCAAAGGGAACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577573.1 |
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| CDS CAA 72 bp | GAGATGACATCATATCCTCACCAGCGGATTGGCTGCTaGCAGGCTTCAGGAATGATATCATCTCGGCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: EMTSYPHQRIGC*QASGMISSRLV Trigger: CACAAGCCGAGATGATATCATTCCTGAAGCCTGCAAGCAGCCAATCCGCTGGTGAGGATATGATGTCATCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656431.1 |
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| CDS GCA 72 bp | ATGCAAACATCCTTCTTCATTTACGGTCTTTGTTCTTaGTCAGTCAGTGTGCTGTGCAGCAGGGTGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: MQTSFFIYGLCS*SVSVLCSRVAF Trigger: GAAGGCCACCCTGCTGCACAGCACACTGACTGAGCAAGAACAAAGACCGTAAATGAAGAAGGATGTTTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000577573.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CCA 72 bp | GGCCGATCTGCAGACATTTCATTCACAACTTGTTGTTaGTCAGTATTTCTCTTCCAAGGGAGGCGGAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GRSADISFTTCC*SVFLFQGRRRC Trigger: ACACCTCCGCCTCCCTTGGAAGAGAAATACTGACCAACAACAAGTTGTGAATGAAATGTCTGCAGATCGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CAA 72 bp | GCTATTCACCTTTGGGGTGAGGAAGAGGTGGAAACCTaGCCAGAACAGGTCTCCAAAGTTTCCTGTTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: AIHLWGEEEVET*PEQVSKVSCFQ Trigger: CTGAAAACAGGAAACTTTGGAGACCTGTTCTGGCAAGGTTTCCACCTCTTCCTCACCCCAAAGGTGAATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663290.1 |
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| CDS CAA 72 bp | GACATTACTTATGCAGAAAGCGGCAAACAGGTGACATaGAGATCGAAGGCTTTCCATCTGCAGGTGCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: DITYAESGKQVT*RSKAFHLQVLL Trigger: TAGCAGCACCTGCAGATGGAAAGCCTTCGATCTCAATGTCACCTGTTTGCCGCTTTCTGCATAAGTAATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CAA 72 bp | AATGCAAACATCCTTCTTCATTTACGGTCTTTGTTCTaGCTCAGTCAGTGTGCTGTGCAGCAGGGTGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: NANILLHLRSLF*LSQCAVQQGGL Trigger: AAGGCCACCCTGCTGCACAGCACACTGACTGAGCAAGAACAAAGACCGTAAATGAAGAAGGATGTTTGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000577573.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CAA 90 bp | TCCAACAATGACATTACTTATGCAGAAAGCGGCAAACAGGTGACATaGAGATCGAAGGCTTTCCATCTGCAGGTGCTGCTACTGTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SNNDITYAESGKQVT*RSKAFHLQVLLLCC Trigger: ACAACACAGTAGCAGCACCTGCAGATGGAAAGCCTTCGATCTCAATGTCACCTGTTTGCCGCTTTCTGCATAAGTAATGTCATTGTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS TCA 72 bp | AGACCTGCACAGGTTGCATTTCGGGAAAATCACTCATaGTCGATCCTCATTTCCCCATTGAACCATCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: RPAQVAFRENHS*SILISPLNHQN Trigger: GTTCTGATGGTTCAATGGGGAAATGAGGATCGATCATGAGTGATTTTCCCGAAATGCAACCTGTGCAGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577573.1 |
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| CDS TCA 72 bp | ATGGGGATGGAGACCATCATAAACTCATTCCAACAATaGCATTACTTATGCAGAAAGCGGCAAACAGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: MGMETIINSFQQ*HYLCRKRQTGD Trigger: GTCACCTGTTTGCCGCTTTCTGCATAAGTAATGTCATTGTTGGAATGAGTTTATGATGGTCTCCATCCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577573.1 ENST00000656431.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS GCA 72 bp | CAAAGTTTCCTGTTTTCAGGCAAGCGAGGAGCAGAATaGAAACATCCTTCTTCATTTACGGTCTTTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: QSFLFSGKRGAE*KHPSSFTVFVL Trigger: AAGAACAAAGACCGTAAATGAAGAAGGATGTTTGCATTCTGCTCCTCGCTTGCCTGAAAACAGGAAACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000577573.1 ENST00000663290.1 ENST00000664653.1 |
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| CDS CCA 72 bp | CTGTGCTTTCAAAATATCGAGGCTTCTTCTGGTCACTaGGCTAAGCACAAGTGGAAAATACATTGTCTAAGT | + |
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Preference number: 6 (lower is better) Translates to: LCFQNIEASSGH*AKHKWKIHCLS Trigger: ACTTAGACAATGTATTTTCCACTTGTGCTTAGCCCAGTGACCAGAAGAAGCCTCGATATTTTGAAAGCACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664653.1 |
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| CDS TCA 72 bp | AATGGTATTAAGAAAATCATAAGGATAATTACCATTTaGCCCAGCAATCCCATTACTGTGAAGCAATCCCGT | + |
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Preference number: 6 (lower is better) Translates to: NGIKKIIRIITI*PSNPITVKQSR Trigger: ACGGGATTGCTTCACAGTAATGGGATTGCTGGGTCAAATGGTAATTATCCTTATGATTTTCTTAATACCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577573.1 ENST00000664653.1 |
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