Pregenerated sensors for LINC01999 (Homo sapiens)

Ensembl gene IDs: ENSG00000267772

Ensembl transcript IDs: ENST00000592917.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GTGCCCCTCAGCTGTACAAAAAGAGTTGCTTCTGAGATTCCAGGTTaGGGCCTGGGAACTGGCAGTCATTGTGACAATGGTGAGATGCCA	+
Preference number: 5 (lower is better) Translates to: VPLSCTKRVASEIPG*GLGTGSHCDNGEMP Trigger: TGGCATCTCACCATTGTCACAATGACTGCCAGTTCCCAGGCCTCAACCTGGAATCTCAGAAGCAACTCTTTTTGTACAGCTGAGGGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592917.1
CDS GCA 90 bp	CAGGTTGAGGCCTGGGAACTGGCAGTCATTGTGACAATGGTGAGATaGCAGGAGAGAGATGGGAATGAAGAAGTTTCCAGTCACTCGCTT	+
Preference number: 5 (lower is better) Translates to: QVEAWELAVIVTMVR*QERDGNEEVSSHSL Trigger: AAGCGAGTGACTGGAAACTTCTTCATTCCCATCTCTCTCCTGGCATCTCACCATTGTCACAATGACTGCCAGTTCCCAGGCCTCAACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592917.1
CDS GCA 90 bp	TCTATTCCAATTCTTCAAAGTGAGAAAGCAGAGGTCTTAAAACCCTaGTCCAAGTTTCCAGTTGGAGCTGTCCAGCCTCCTGACCTAGTG	+
Preference number: 5 (lower is better) Translates to: SIPILQSEKAEVLKP*SKFPVGAVQPPDLV Trigger: CACTAGGTCAGGAGGCTGGACAGCTCCAACTGGAAACTTGGAGCAGGGTTTTAAGACCTCTGCTTTCTCACTTTGAAGAATTGGAATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592917.1
CDS TCA 72 bp	CCAGGTGCCCCTCAGCTGTACAAAAAGAGTTGCTTCTaGGATTCCAGGTTGAGGCCTGGGAACTGGCAGTCA	+
Preference number: 6 (lower is better) Translates to: PGAPQLYKKSCF*DSRLRPGNWQS Trigger: TGACTGCCAGTTCCCAGGCCTCAACCTGGAATCTCAGAAGCAACTCTTTTTGTACAGCTGAGGGGCACCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592917.1
CDS CAA 72 bp	CTATGTTCCAGGTGCCCCTCAGCTGTACAAAAAGAGTaGCTTCTGAGATTCCAGGTTGAGGCCTGGGAACTG	+
Preference number: 6 (lower is better) Translates to: LCSRCPSAVQKE*LLRFQVEAWEL Trigger: CAGTTCCCAGGCCTCAACCTGGAATCTCAGAAGCAACTCTTTTTGTACAGCTGAGGGGCACCTGGAACATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592917.1
CDS GCA 72 bp	GCCTGGGAACTGGCAGTCATTGTGACAATGGTGAGATaGCAGGAGAGAGATGGGAATGAAGAAGTTTCCAGT	+
Preference number: 6 (lower is better) Translates to: AWELAVIVTMVR*QERDGNEEVSS Trigger: ACTGGAAACTTCTTCATTCCCATCTCTCTCCTGGCATCTCACCATTGTCACAATGACTGCCAGTTCCCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592917.1
CDS CCA 72 bp	GAGATGGGAATGAAGAAGTTTCCAGTCACTCGCTTCTaGCTGACCTTAAGGCTCTGTAGCAAGCAGAAAACG	+
Preference number: 6 (lower is better) Translates to: EMGMKKFPVTRF*LTLRLCSKQKT Trigger: CGTTTTCTGCTTGCTACAGAGCCTTAAGGTCAGCCAGAAGCGAGTGACTGGAAACTTCTTCATTCCCATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592917.1

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