Pregenerated sensors for LINC01993 (Homo sapiens)
Ensembl gene IDs: ENSG00000204277Ensembl transcript IDs: ENST00000374945.1
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTCCCCGTGGCCCTGCTGCCAGCACCTGGCGGCCCCCAAGGGCACTaGGTACCTGGAGCCCGGCTTTGCATCCACAGGTCTGCCCTAGGG | + |
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Preference number: 5 (lower is better) Translates to: VPVALLPAPGGPQGH*VPGARLCIHRSALG Trigger: CCCTAGGGCAGACCTGTGGATGCAAAGCCGGGCTCCAGGTACGCAGTGCCCTTGGGGGCCGCCAGGTGCTGGCAGCAGGGCCACGGGGAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 90 bp | GGAGTGCTGGCATCTCGGGGCCACCAGGGCATGGGCAAGAGTGGCTaGCCAGCCCCTGCCAAGGGCCTGAAGCCAGCGCCAGGCAGACCC | + |
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Preference number: 5 (lower is better) Translates to: GVLASRGHQGMGKSG*PAPAKGLKPAPGRP Trigger: GGGTCTGCCTGGCGCTGGCTTCAGGCCCTTGGCAGGGGCTGGGCAGCCACTCTTGCCCATGCCCTGGTGGCCCCGAGATGCCAGCACTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 90 bp | GGAGGTGGGGGCCCTGAGAGCGGGCCCAGGGTTCAGCCCTGCCTCTaGAGCTGCTGGAGCACCAGTGAAGAGAGGGCAGGTGCCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GGGGPESGPRVQPCL*SCWSTSEERAGASR Trigger: CCTGCTGGCACCTGCCCTCTCTTCACTGGTGCTCCAGCAGCTGCAGAGGCAGGGCTGAACCCTGGGCCCGCTCTCAGGGCCCCCACCTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 90 bp | CAGAGGAGTGCTGGCATCTCGGGGCCACCAGGGCATGGGCAAGAGTaGCTGCCCAGCCCCTGCCAAGGGCCTGAAGCCAGCGCCAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: QRSAGISGPPGHGQE*LPSPCQGPEASARQ Trigger: CTGCCTGGCGCTGGCTTCAGGCCCTTGGCAGGGGCTGGGCAGCCACTCTTGCCCATGCCCTGGTGGCCCCGAGATGCCAGCACTCCTCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 90 bp | TCAGCTCCGTGCACTGCGCCTTGCCTGTTGCCGGGGCCTCTGTTCTaGCCCCTCGGCAGGGAGGACAGAGGGTCAGATGCCGGGCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: SAPCTAPCLLPGPLF*PLGREDRGSDAGPQ Trigger: CTGAGGCCCGGCATCTGACCCTCTGTCCTCCCTGCCGAGGGGCCAGAACAGAGGCCCCGGCAACAGGCAAGGCGCAGTGCACGGAGCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 90 bp | ACCTCCTCCACCCTGGGTGGGTTCCCCAACCACCCAGAGGAGTGCTaGCATCTCGGGGCCACCAGGGCATGGGCAAGAGTGGCTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: TSSTLGGFPNHPEEC*HLGATRAWARVAAQ Trigger: CTGGGCAGCCACTCTTGCCCATGCCCTGGTGGCCCCGAGATGCCAGCACTCCTCTGGGTGGTTGGGGAACCCACCCAGGGTGGAGGAGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 90 bp | GAGACCGTGGGGTCTGCTGCCCTGGAGATGTGGAATCCCAGGCCTTaGCCACCTCCTCCACCCTGGGTGGGTTCCCCAACCACCCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: ETVGSAALEMWNPRP*PPPPPWVGSPTTQR Trigger: CCTCTGGGTGGTTGGGGAACCCACCCAGGGTGGAGGAGGTGGGCAAGGCCTGGGATTCCACATCTCCAGGGCAGCAGACCCCACGGTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 90 bp | TGGAGATGTGGAATCCCAGGCCTTGCCCACCTCCTCCACCCTGGGTaGGTTCCCCAACCACCCAGAGGAGTGCTGGCATCTCGGGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: WRCGIPGLAHLLHPG*VPQPPRGVLASRGH Trigger: GTGGCCCCGAGATGCCAGCACTCCTCTGGGTGGTTGGGGAACCCACCCAGGGTGGAGGAGGTGGGCAAGGCCTGGGATTCCACATCTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 90 bp | AGAGGCAGGGGACCCAAGGCTGAGCCGGCTGTGGGCTCTGCTTCCTaGAGTCCAGGGTCCAGCACGGGGACCAGGTTATTCCTTCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: RGRGPKAEPAVGSAS*SPGSSTGTRLFLRS Trigger: GGAGCGAAGGAATAACCTGGTCCCCGTGCTGGACCCTGGACTCCAGGAAGCAGAGCCCACAGCCGGCTCAGCCTTGGGTCCCCTGCCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 90 bp | CAGACAAGATCCCTGGAGACCGTGGGGTCTGCTGCCCTGGAGATGTaGAATCCCAGGCCTTGCCCACCTCCTCCACCCTGGGTGGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: QTRSLETVGSAALEM*NPRPCPPPPPWVGS Trigger: GGAACCCACCCAGGGTGGAGGAGGTGGGCAAGGCCTGGGATTCCACATCTCCAGGGCAGCAGACCCCACGGTCTCCAGGGATCTTGTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 90 bp | AGGGAGGCTGCCTTACAGGGAGGTATCAGTGGCTCCCTCATCCTCTaGCTCTGTGGAGCCCACAGTGGGAGGCACCAGCAGCAGCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: REAALQGGISGSLIL*LCGAHSGRHQQQLC Trigger: GCAGAGCTGCTGCTGGTGCCTCCCACTGTGGGCTCCACAGAGGCAGAGGATGAGGGAGCCACTGATACCTCCCTGTAAGGCAGCCTCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 90 bp | TTTGGGCACAGACAAGATCCCTGGAGACCGTGGGGTCTGCTGCCCTaGAGATGTGGAATCCCAGGCCTTGCCCACCTCCTCCACCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: FGHRQDPWRPWGLLP*RCGIPGLAHLLHPG Trigger: CCCAGGGTGGAGGAGGTGGGCAAGGCCTGGGATTCCACATCTCCAGGGCAGCAGACCCCACGGTCTCCAGGGATCTTGTCTGTGCCCAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 90 bp | AGGAGTTTGGGCACAGACAAGATCCCTGGAGACCGTGGGGTCTGCTaGCCTGGAGATGTGGAATCCCAGGCCTTGCCCACCTCCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: RSLGTDKIPGDRGVC*PGDVESQALPTSST Trigger: GGTGGAGGAGGTGGGCAAGGCCTGGGATTCCACATCTCCAGGGCAGCAGACCCCACGGTCTCCAGGGATCTTGTCTGTGCCCAAACTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 90 bp | CCCTGCCAAGGGCCTGAAGCCAGCGCCAGGCAGACCCTGCCTTGTTaGGCAGTATCTTCAGTAAGGGCTCTGTGTGCCGAACACCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: PCQGPEASARQTLPC*AVSSVRALCAEHLL Trigger: CAGCAGGTGTTCGGCACACAGAGCCCTTACTGAAGATACTGCTCAACAAGGCAGGGTCTGCCTGGCGCTGGCTTCAGGCCCTTGGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 90 bp | ATGCCCTGGGCTGTCATCATTCCACACTCACCCCTGACCTGCTCCTaGTCGCTCAGGGAGGCTGCCTTACAGGGAGGTATCAGTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: MPWAVIIPHSPLTCS*SLREAALQGGISGS Trigger: GGAGCCACTGATACCTCCCTGTAAGGCAGCCTCCCTGAGCGAGCAGGAGCAGGTCAGGGGTGAGTGTGGAATGATGACAGCCCAGGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 90 bp | GGGAAGTCTCAGGAGTTTGGGCACAGACAAGATCCCTGGAGACCGTaGGGTCTGCTGCCCTGGAGATGTGGAATCCCAGGCCTTGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: GKSQEFGHRQDPWRP*GLLPWRCGIPGLAH Trigger: GTGGGCAAGGCCTGGGATTCCACATCTCCAGGGCAGCAGACCCCACGGTCTCCAGGGATCTTGTCTGTGCCCAAACTCCTGAGACTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 90 bp | GAAAGGACAGGGAAGTCTCAGGAGTTTGGGCACAGACAAGATCCCTaGAGACCGTGGGGTCTGCTGCCCTGGAGATGTGGAATCCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: ERTGKSQEFGHRQDP*RPWGLLPWRCGIPG Trigger: GCCTGGGATTCCACATCTCCAGGGCAGCAGACCCCACGGTCTCCAGGGATCTTGTCTGTGCCCAAACTCCTGAGACTTCCCTGTCCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 90 bp | CGTGCCCGGCCTCACACACCGTTTTTAAGCTGGCTCAAGGATCCGTaGTCTGATGCATCCTCCAGTCCCAGGCGACGTCAACATGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: RARPHTPFLSWLKDP*SDASSSPRRRQHGR Trigger: TCTTCCATGTTGACGTCGCCTGGGACTGGAGGATGCATCAGAGCACGGATCCTTGAGCCAGCTTAAAAACGGTGTGTGAGGCCGGGCACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 90 bp | AGCCCTTCTGTTACCTTGTCCTCAGCCGGCCTGCTTCTGTCCCTGTaGCATAAGCCAGATGAATTTCTCTCCCAGGCTGGCCAAGACGCC | + |
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Preference number: 5 (lower is better) Translates to: SPSVTLSSAGLLLSL*HKPDEFLSQAGQDA Trigger: GGCGTCTTGGCCAGCCTGGGAGAGAAATTCATCTGGCTTATGGCACAGGGACAGAAGCAGGCCGGCTGAGGACAAGGTAACAGAAGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 90 bp | CCGGCCTCACACACCGTTTTTAAGCTGGCTCAAGGATCCGTGCTCTaGTGCATCCTCCAGTCCCAGGCGACGTCAACATGGAAGATGTGG | + |
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Preference number: 5 (lower is better) Translates to: PASHTVFKLAQGSVL*CILQSQATSTWKMW Trigger: CCACATCTTCCATGTTGACGTCGCCTGGGACTGGAGGATGCATCAGAGCACGGATCCTTGAGCCAGCTTAAAAACGGTGTGTGAGGCCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 90 bp | GCAGACCCTGCCTTGTTGAGCAGTATCTTCAGTAAGGGCTCTGTGTaGCGAACACCTGCTGTGCGCCCTGCACACTTATCCCAGAGATGG | + |
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Preference number: 5 (lower is better) Translates to: ADPALLSSIFSKGSV*RTPAVRPAHLSQRW Trigger: CCATCTCTGGGATAAGTGTGCAGGGCGCACAGCAGGTGTTCGGCACACAGAGCCCTTACTGAAGATACTGCTCAACAAGGCAGGGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 90 bp | GTGTGCCGAACACCTGCTGTGCGCCCTGCACACTTATCCCAGAGATaGGATTCAAACCCAGGTTGCCCAGCGCAGAGAAACAGCATTCTC | + |
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Preference number: 5 (lower is better) Translates to: VCRTPAVRPAHLSQR*DSNPGCPAQRNSIL Trigger: GAGAATGCTGTTTCTCTGCGCTGGGCAACCTGGGTTTGAATCCCATCTCTGGGATAAGTGTGCAGGGCGCACAGCAGGTGTTCGGCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 90 bp | GTCCTGAGAGTCAGGTGCCTTCCTGGACCCCTTGGTGAGCGGAGGTaGGTTGCCATCAAGGAGGGAAGATTCAGGAAGATAACTCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: VLRVRCLPGPLGERR*VAIKEGRFRKITPR Trigger: CCTTGGAGTTATCTTCCTGAATCTTCCCTCCTTGATGGCAACTCACCTCCGCTCACCAAGGGGTCCAGGAAGGCACCTGACTCTCAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 90 bp | AATCCGTCCACCAGTCAGTGGATGGCAAACATAATCCATGGGCACTaGTTAGGTTTGCCAGCCCATGCTGAGTGCTGGGTTCAGTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: NPSTSQWMANIIHGH*LGLPAHAECWVQCP Trigger: AGGACACTGAACCCAGCACTCAGCATGGGCTGGCAAACCTAATCAGTGCCCATGGATTATGTTTGCCATCCACTGACTGGTGGACGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 90 bp | AGGAGGGCCGGTTCTCATGGAATGGACAAGGCGCTAGGCAGGAAATaGTGGATCACTAGCCCCGGGTACCAGTCATTAATAGTAGTAGTA | + |
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Preference number: 5 (lower is better) Translates to: RRAGSHGMDKALGRK*WITSPGYQSLIVVV Trigger: TACTACTACTATTAATGACTGGTACCCGGGGCTAGTGATCCAGCATTTCCTGCCTAGCGCCTTGTCCATTCCATGAGAACCGGCCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 90 bp | CCAGGTTGCCCAGCGCAGAGAAACAGCATTCTCCTTCTGCATCCGTaGAGGAAGCTTTGTCTTCTAAAAGCCCTAGCCCTTCTGTTACCT | + |
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Preference number: 5 (lower is better) Translates to: PGCPAQRNSILLLHP*RKLCLLKALALLLP Trigger: AGGTAACAGAAGGGCTAGGGCTTTTAGAAGACAAAGCTTCCTTCACGGATGCAGAAGGAGAATGCTGTTTCTCTGCGCTGGGCAACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 90 bp | CTTTTCTCATTGACTGGTCAGGCTGGTTGGTATGTGCAAGCATACTaGTCCTTGCGGGTTCTGTGCGTTGCAAAGATTTCACCCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: LFSLTGQAGWYVQAY*SLRVLCVAKISPQG Trigger: GCCCTGGGGTGAAATCTTTGCAACGCACAGAACCCGCAAGGATCAGTATGCTTGCACATACCAACCAGCCTGACCAGTCAATGAGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 90 bp | AGGGCCGGTTCTCATGGAATGGACAAGGCGCTAGGCAGGAAATGCTaGATCACTAGCCCCGGGTACCAGTCATTAATAGTAGTAGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: RAGSHGMDKALGRKC*ITSPGYQSLIVVVN Trigger: GTTTACTACTACTATTAATGACTGGTACCCGGGGCTAGTGATCCAGCATTTCCTGCCTAGCGCCTTGTCCATTCCATGAGAACCGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | GCATCTCGGGGCCACCAGGGCATGGGCAAGAGTGGCTaGCCAGCCCCTGCCAAGGGCCTGAAGCCAGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: ASRGHQGMGKSG*PAPAKGLKPAP Trigger: TGGCGCTGGCTTCAGGCCCTTGGCAGGGGCTGGGCAGCCACTCTTGCCCATGCCCTGGTGGCCCCGAGATGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | AGGCCTGGACCGAGGCACGGGGTCAGCTCCGTGCACTaGGCCTTGCCTGTTGCCGGGGCCTCTGTTCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RPGPRHGVSSVH*ALPVAGASVLA Trigger: GGCCAGAACAGAGGCCCCGGCAACAGGCAAGGCGCAGTGCACGGAGCTGACCCCGTGCCTCGGTCCAGGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | GCCAGCACCTGGCGGCCCCCAAGGGCACTGCGTACCTaGAGCCCGGCTTTGCATCCACAGGTCTGCCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: ASTWRPPRALRT*SPALHPQVCPR Trigger: CCTAGGGCAGACCTGTGGATGCAAAGCCGGGCTCCAGGTACGCAGTGCCCTTGGGGGCCGCCAGGTGCTGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | TTGCTAGGCCTGGACCGAGGCACGGGGTCAGCTCCGTaGACTGCGCCTTGCCTGTTGCCGGGGCCTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LLGLDRGTGSAP*TAPCLLPGPLF Trigger: GAACAGAGGCCCCGGCAACAGGCAAGGCGCAGTGCACGGAGCTGACCCCGTGCCTCGGTCCAGGCCTAGCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | ACCCTGGGTGGGTTCCCCAACCACCCAGAGGAGTGCTaGCATCTCGGGGCCACCAGGGCATGGGCAAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: TLGGFPNHPEEC*HLGATRAWARV Trigger: CACTCTTGCCCATGCCCTGGTGGCCCCGAGATGCCAGCACTCCTCTGGGTGGTTGGGGAACCCACCCAGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | GAGGACAGAGGGTCAGATGCCGGGCCTCAGGCACAGTaGCCATCTGGGGTAGGGCCAGCTCCACAGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: EDRGSDAGPQAQ*PSGVGPAPQRQ Trigger: CTGCCTCTGTGGAGCTGGCCCTACCCCAGATGGCCACTGTGCCTGAGGCCCGGCATCTGACCCTCTGTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CAA 72 bp | CGGCCCCCAAGGGCACTGCGTACCTGGAGCCCGGCTTaGCATCCACAGGTCTGCCCTAGGGGGCTGTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: RPPRALRTWSPA*HPQVCPRGLLN Trigger: GTTCAACAGCCCCCTAGGGCAGACCTGTGGATGCAAAGCCGGGCTCCAGGTACGCAGTGCCCTTGGGGGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | GTCTGCCCTAGGGGGCTGTTGAACTCCAGAAGTCGCTaGCTGCTCAGGGTCTCCGTGTCCTCCCCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VCPRGLLNSRSR*LLRVSVSSPCR Trigger: CCTGCAGGGGGAGGACACGGAGACCCTGAGCAGGCAGCGACTTCTGGAGTTCAACAGCCCCCTAGGGCAGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | GGACCCAAGGCTGAGCCGGCTGTGGGCTCTGCTTCCTaGAGTCCAGGGTCCAGCACGGGGACCAGGTTATTC | + |
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Preference number: 6 (lower is better) Translates to: GPKAEPAVGSAS*SPGSSTGTRLF Trigger: GAATAACCTGGTCCCCGTGCTGGACCCTGGACTCCAGGAAGCAGAGCCCACAGCCGGCTCAGCCTTGGGTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CAA 90 bp | AGCACCTGGCGGCCCCCAAGGGCACTGCGTACCTGGAGCCCGGCTTaGCATCCACAGGTCTGCCCTAGGGGGCTGTTGAACTCCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: STWRPPRALRTWSPA*HPQVCPRGLLNSRS Trigger: ACTTCTGGAGTTCAACAGCCCCCTAGGGCAGACCTGTGGATGCAAAGCCGGGCTCCAGGTACGCAGTGCCCTTGGGGGCCGCCAGGTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | GGCACAGACAAGATCCCTGGAGACCGTGGGGTCTGCTaGCCTGGAGATGTGGAATCCCAGGCCTTGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: GTDKIPGDRGVC*PGDVESQALPT Trigger: GGTGGGCAAGGCCTGGGATTCCACATCTCCAGGGCAGCAGACCCCACGGTCTCCAGGGATCTTGTCTGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 72 bp | GGATGCCCTGGGCTGTCATCATTCCACACTCACCCCTaGCCTGCTCCTGCTCGCTCAGGGAGGCTGCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: GCPGLSSFHTHP*PAPARSGRLPY Trigger: GTAAGGCAGCCTCCCTGAGCGAGCAGGAGCAGGTCAGGGGTGAGTGTGGAATGATGACAGCCCAGGGCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | GCCTTACAGGGAGGTATCAGTGGCTCCCTCATCCTCTaGCTCTGTGGAGCCCACAGTGGGAGGCACCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ALQGGISGSLIL*LCGAHSGRHQQ Trigger: CTGCTGGTGCCTCCCACTGTGGGCTCCACAGAGGCAGAGGATGAGGGAGCCACTGATACCTCCCTGTAAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | CTCGCTCAGGGAGGCTGCCTTACAGGGAGGTATCAGTaGCTCCCTCATCCTCTGCCTCTGTGGAGCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: LAQGGCLTGRYQ*LPHPLPLWSPQ Trigger: CTGTGGGCTCCACAGAGGCAGAGGATGAGGGAGCCACTGATACCTCCCTGTAAGGCAGCCTCCCTGAGCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | TCCAGCACGGGGACCAGGTTATTCCTTCGCTCCTCCTaGCTTGGCAGAGCGTCATGGAAGGTGGCCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SSTGTRLFLRSS*LGRASWKVAFP Trigger: GGGGAAGGCCACCTTCCATGACGCTCTGCCAAGCCAGGAGGAGCGAAGGAATAACCTGGTCCCCGTGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | CAGGAGTTTGGGCACAGACAAGATCCCTGGAGACCGTaGGGTCTGCTGCCCTGGAGATGTGGAATCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: QEFGHRQDPWRP*GLLPWRCGIPG Trigger: GCCTGGGATTCCACATCTCCAGGGCAGCAGACCCCACGGTCTCCAGGGATCTTGTCTGTGCCCAAACTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | TTATTCCTTCGCTCCTCCTGGCTTGGCAGAGCGTCATaGAAGGTGGCCTTCCCCAGACTCCCCCACATCCCC | + |
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Preference number: 6 (lower is better) Translates to: LFLRSSWLGRAS*KVAFPRLPHIP Trigger: GGGGATGTGGGGGAGTCTGGGGAAGGCCACCTTCCATGACGCTCTGCCAAGCCAGGAGGAGCGAAGGAATAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | AACATAGTGAAACCCCATATCAGCCTGCGGCCGCACTaGCTGCTGACAGCTGGGACGCTGGGGTCTGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: NIVKPHISLRPH*LLTAGTLGSGV Trigger: AACGCCAGACCCCAGCGTCCCAGCTGTCAGCAGCCAGTGCGGCCGCAGGCTGATATGGGGTTTCACTATGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CAA 90 bp | CCACATCCCCTCCTCCCACTTCTGCAGCCACCAGAGCCAGGGCCCTaGTGGGAAAGGACAGGGAAGTCTCAGGAGTTTGGGCACAGACAA | + |
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Preference number: 6 (lower is better) Translates to: PHPLLPLLQPPEPGP*WERTGKSQEFGHRQ Trigger: TTGTCTGTGCCCAAACTCCTGAGACTTCCCTGTCCTTTCCCACAAGGGCCCTGGCTCTGGTGGCTGCAGAAGTGGGAGGAGGGGATGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 72 bp | GGGCCTGAAGCCAGCGCCAGGCAGACCCTGCCTTGTTaGGCAGTATCTTCAGTAAGGGCTCTGTGTGCCGAA | + |
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Preference number: 6 (lower is better) Translates to: GPEASARQTLPC*AVSSVRALCAE Trigger: TTCGGCACACAGAGCCCTTACTGAAGATACTGCTCAACAAGGCAGGGTCTGCCTGGCGCTGGCTTCAGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | GGGAAGTCTCAGGAGTTTGGGCACAGACAAGATCCCTaGAGACCGTGGGGTCTGCTGCCCTGGAGATGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GKSQEFGHRQDP*RPWGLLPWRCG Trigger: TCCACATCTCCAGGGCAGCAGACCCCACGGTCTCCAGGGATCTTGTCTGTGCCCAAACTCCTGAGACTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CAA 72 bp | GGGTACCTGGGTGGAGCTGGTTGGGGACCATTGCTCTaGGTCCAGATAAGGCATGACAAGGCCTGGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: GYLGGAGWGPLL*VQIRHDKAWAK Trigger: CTTGGCCCAGGCCTTGTCATGCCTTATCTGGACCAAGAGCAATGGTCCCCAACCAGCTCCACCCAGGTACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | AGCCACCGTGCCCGGCCTCACACACCGTTTTTAAGCTaGCTCAAGGATCCGTGCTCTGATGCATCCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SHRARPHTPFLS*LKDPCSDASSS Trigger: ACTGGAGGATGCATCAGAGCACGGATCCTTGAGCCAGCTTAAAAACGGTGTGTGAGGCCGGGCACGGTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | GATGTCCCTGGTGAGGCTGAGGAGGGCCGGTTCTCATaGAATGGACAAGGCGCTAGGCAGGAAATGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: DVPGEAEEGRFS*NGQGARQEMLD Trigger: ATCCAGCATTTCCTGCCTAGCGCCTTGTCCATTCCATGAGAACCGGCCCTCCTCAGCCTCACCAGGGACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | CATTCCTCCAGCAGGCCCTGTCCTAAGCACACTGCATaGACTAACTCCTGTAGACCCTCGGCCTCCCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: HSSSRPCPKHTA*TNSCRPSASQS Trigger: ACTTTGGGAGGCCGAGGGTCTACAGGAGTTAGTGCATGCAGTGTGCTTAGGACAGGGCCTGCTGGAGGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | GACCTCGAATGGACGCCTGGGACCATGATCCCATTTTaGTTTTTCCTGGAGGCAGAGAGGGCTCAGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: DLEWTPGTMIPF*FFLEAERAQSQ Trigger: CTGGGACTGAGCCCTCTCTGCCTCCAGGAAAAAGCAAAATGGGATCATGGTCCCAGGCGTCCATTCGAGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | GGGGAATGGAACCTGGTGACTTGTGGACCTGCGGAATaGGGGACAGGAGTTGAGATGACTCCAGGTATCTCC | + |
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Preference number: 6 (lower is better) Translates to: GEWNLVTCGPAE*GTGVEMTPGIS Trigger: GGAGATACCTGGAGTCATCTCAACTCCTGTCCCCCATTCCGCAGGTCCACAAGTCACCAGGTTCCATTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CAA 72 bp | GGACCTCGAATGGACGCCTGGGACCATGATCCCATTTaGCTTTTTCCTGGAGGCAGAGAGGGCTCAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GPRMDAWDHDPI*LFPGGREGSVP Trigger: TGGGACTGAGCCCTCTCTGCCTCCAGGAAAAAGCAAAATGGGATCATGGTCCCAGGCGTCCATTCGAGGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 72 bp | CAGGTATCTCCCGACATGAGCACATGTATCTGCAAATaGGGCGGGGGTCAGGAAGCACAGGGAGCTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: QVSPDMSTCICK*GGGQEAQGACS Trigger: AGAGCAAGCTCCCTGTGCTTCCTGACCCCCGCCTCATTTGCAGATACATGTGCTCATGTCGGGAGATACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 72 bp | CACACCGTTTTTAAGCTGGCTCAAGGATCCGTGCTCTaGTGCATCCTCCAGTCCCAGGCGACGTCAACATGG | + |
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Preference number: 6 (lower is better) Translates to: HTVFKLAQGSVL*CILQSQATSTW Trigger: CCATGTTGACGTCGCCTGGGACTGGAGGATGCATCAGAGCACGGATCCTTGAGCCAGCTTAAAAACGGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 72 bp | GTCAGGTGCCTTCCTGGACCCCTTGGTGAGCGGAGGTaGGTTGCCATCAAGGAGGGAAGATTCAGGAAGATA | + |
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Preference number: 6 (lower is better) Translates to: VRCLPGPLGERR*VAIKEGRFRKI Trigger: TATCTTCCTGAATCTTCCCTCCTTGATGGCAACTCACCTCCGCTCACCAAGGGGTCCAGGAAGGCACCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | CCTCACACACCGTTTTTAAGCTGGCTCAAGGATCCGTaGTCTGATGCATCCTCCAGTCCCAGGCGACGTCAA | + |
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Preference number: 6 (lower is better) Translates to: PHTPFLSWLKDP*SDASSSPRRRQ Trigger: TTGACGTCGCCTGGGACTGGAGGATGCATCAGAGCACGGATCCTTGAGCCAGCTTAAAAACGGTGTGTGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | GCCTTGTTGAGCAGTATCTTCAGTAAGGGCTCTGTGTaGCGAACACCTGCTGTGCGCCCTGCACACTTATCC | + |
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Preference number: 6 (lower is better) Translates to: ALLSSIFSKGSV*RTPAVRPAHLS Trigger: GGATAAGTGTGCAGGGCGCACAGCAGGTGTTCGGCACACAGAGCCCTTACTGAAGATACTGCTCAACAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | TGTGCAAGCATACTGATCCTTGCGGGTTCTGTGCGTTaGAAAGATTTCACCCCAGGGCTGGGTGCAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: CASILILAGSVR*KDFTPGLGAVA Trigger: AGCCACTGCACCCAGCCCTGGGGTGAAATCTTTGCAACGCACAGAACCCGCAAGGATCAGTATGCTTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | CCATTGCTCTTGGTCCAGATAAGGCATGACAAGGCCTaGGCCAAGACCCCTGAAATGGGGCATGGAGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: PLLLVQIRHDKA*AKTPEMGHGES Trigger: AGACTCTCCATGCCCCATTTCAGGGGTCTTGGCCCAGGCCTTGTCATGCCTTATCTGGACCAAGAGCAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | AGCTTCCTCCTCCTTCCAGGAACTTGTCCTCTAACTTaGGGCGGCAGCGAGGCCTCTAATCTTTCGGATCTC | + |
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Preference number: 6 (lower is better) Translates to: SFLLLPGTCPLT*GGSEASNLSDL Trigger: GAGATCCGAAAGATTAGAGGCCTCGCTGCCGCCCCAAGTTAGAGGACAAGTTCCTGGAAGGAGGAGGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CAA 72 bp | ATGTGCAAGCATACTGATCCTTGCGGGTTCTGTGCGTaGCAAAGATTTCACCCCAGGGCTGGGTGCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: MCKHTDPCGFCA*QRFHPRAGCSG Trigger: GCCACTGCACCCAGCCCTGGGGTGAAATCTTTGCAACGCACAGAACCCGCAAGGATCAGTATGCTTGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CAA 90 bp | TGTGCGCCCTGCACACTTATCCCAGAGATGGGATTCAAACCCAGGTaGCCCAGCGCAGAGAAACAGCATTCTCCTTCTGCATCCGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: CAPCTLIPEMGFKPR*PSAEKQHSPSASVK Trigger: CTTCACGGATGCAGAAGGAGAATGCTGTTTCTCTGCGCTGGGCAACCTGGGTTTGAATCCCATCTCTGGGATAAGTGTGCAGGGCGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 72 bp | CTTGTGGACCTGCGGAATGGGGGACAGGAGTTGAGATaGCTCCAGGTATCTCCCGACATGAGCACATGTATC | + |
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Preference number: 6 (lower is better) Translates to: LVDLRNGGQELR*LQVSPDMSTCI Trigger: GATACATGTGCTCATGTCGGGAGATACCTGGAGTCATCTCAACTCCTGTCCCCCATTCCGCAGGTCCACAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | TCTTCAGTAAGGGCTCTGTGTGCCGAACACCTGCTGTaGGCCCTGCACACTTATCCCAGAGATGGGATTCAA | + |
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Preference number: 6 (lower is better) Translates to: SSVRALCAEHLL*ALHTYPRDGIQ Trigger: TTGAATCCCATCTCTGGGATAAGTGTGCAGGGCGCACAGCAGGTGTTCGGCACACAGAGCCCTTACTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | GTCAGGCTGGTTGGTATGTGCAAGCATACTGATCCTTaGGGGTTCTGTGCGTTGCAAAGATTTCACCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VRLVGMCKHTDP*GFCALQRFHPR Trigger: CCTGGGGTGAAATCTTTGCAACGCACAGAACCCGCAAGGATCAGTATGCTTGCACATACCAACCAGCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | GGTTCTCATGGAATGGACAAGGCGCTAGGCAGGAAATaGTGGATCACTAGCCCCGGGTACCAGTCATTAATA | + |
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Preference number: 6 (lower is better) Translates to: GSHGMDKALGRK*WITSPGYQSLI Trigger: TATTAATGACTGGTACCCGGGGCTAGTGATCCAGCATTTCCTGCCTAGCGCCTTGTCCATTCCATGAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS GCA 72 bp | GCACACTTATCCCAGAGATGGGATTCAAACCCAGGTTaGCCAGCGCAGAGAAACAGCATTCTCCTTCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: AHLSQRWDSNPG*PAQRNSILLLH Trigger: ATGCAGAAGGAGAATGCTGTTTCTCTGCGCTGGGCAACCTGGGTTTGAATCCCATCTCTGGGATAAGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CAA 72 bp | TGCACACTTATCCCAGAGATGGGATTCAAACCCAGGTaGCCCAGCGCAGAGAAACAGCATTCTCCTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: CTLIPEMGFKPR*PSAEKQHSPSA Trigger: TGCAGAAGGAGAATGCTGTTTCTCTGCGCTGGGCAACCTGGGTTTGAATCCCATCTCTGGGATAAGTGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CAA 90 bp | AGCGCAGAGAAACAGCATTCTCCTTCTGCATCCGTGAAGGAAGCTTaGTCTTCTAAAAGCCCTAGCCCTTCTGTTACCTTGTCCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SAEKQHSPSASVKEA*SSKSPSPSVTLSSA Trigger: GGCTGAGGACAAGGTAACAGAAGGGCTAGGGCTTTTAGAAGACAAAGCTTCCTTCACGGATGCAGAAGGAGAATGCTGTTTCTCTGCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 72 bp | CCAGCGCAGAGAAACAGCATTCTCCTTCTGCATCCGTaGAGGAAGCTTTGTCTTCTAAAAGCCCTAGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: PAQRNSILLLHP*RKLCLLKALAL Trigger: AAGGGCTAGGGCTTTTAGAAGACAAAGCTTCCTTCACGGATGCAGAAGGAGAATGCTGTTTCTCTGCGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | TCTCATGGAATGGACAAGGCGCTAGGCAGGAAATGCTaGATCACTAGCCCCGGGTACCAGTCATTAATAGTA | + |
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Preference number: 6 (lower is better) Translates to: SHGMDKALGRKC*ITSPGYQSLIV Trigger: TACTATTAATGACTGGTACCCGGGGCTAGTGATCCAGCATTTCCTGCCTAGCGCCTTGTCCATTCCATGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS TCA 72 bp | TTGACTGGTCAGGCTGGTTGGTATGTGCAAGCATACTaGTCCTTGCGGGTTCTGTGCGTTGCAAAGATTTCA | + |
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Preference number: 6 (lower is better) Translates to: LTGQAGWYVQAY*SLRVLCVAKIS Trigger: TGAAATCTTTGCAACGCACAGAACCCGCAAGGATCAGTATGCTTGCACATACCAACCAGCCTGACCAGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CCA 72 bp | AGCATGTTCTGGTCTTTTCTCATTGACTGGTCAGGCTaGTTGGTATGTGCAAGCATACTGATCCTTGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: SMFWSFLIDWSG*LVCASILILAG Trigger: ACCCGCAAGGATCAGTATGCTTGCACATACCAACCAGCCTGACCAGTCAATGAGAAAAGACCAGAACATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CAA 72 bp | ATGTTCTGGTCTTTTCTCATTGACTGGTCAGGCTGGTaGGTATGTGCAAGCATACTGATCCTTGCGGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: MFWSFLIDWSGW*VCASILILAGS Trigger: AGAACCCGCAAGGATCAGTATGCTTGCACATACCAACCAGCCTGACCAGTCAATGAGAAAAGACCAGAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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| CDS CAA 72 bp | AAACAGCATTCTCCTTCTGCATCCGTGAAGGAAGCTTaGTCTTCTAAAAGCCCTAGCCCTTCTGTTACCTTG | + |
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Preference number: 6 (lower is better) Translates to: KQHSPSASVKEA*SSKSPSPSVTL Trigger: CAAGGTAACAGAAGGGCTAGGGCTTTTAGAAGACAAAGCTTCCTTCACGGATGCAGAAGGAGAATGCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374945.1 |
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