Pregenerated sensors for LINC01991 (Homo sapiens)
Ensembl gene IDs: ENSG00000224187Ensembl transcript IDs: ENST00000423643.1, ENST00000446091.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTTGAGCCCTCTGCTCGCACGTTTCCACTTCCTCTCACTTTCCTGTaGGTGGCTGTGGCCTCCGAGTGTGCTGCTCAGAGCAGGCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: FEPSARTFPLPLTFL*VAVASECAAQSRPG Trigger: ACCCGGCCTGCTCTGAGCAGCACACTCGGAGGCCACAGCCACGCACAGGAAAGTGAGAGGAAGTGGAAACGTGCGAGCAGAGGGCTCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423643.1 |
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| CDS CCA 90 bp | CCGAGTGTGCTGCTCAGAGCAGGCCGGGTGATTCTCATGGGCCTGTaGCCTTTGATGGAGCCAGGGGAGGCAGGTTCTTCTACCACTGGT | + |
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Preference number: 5 (lower is better) Translates to: PSVLLRAGRVILMGL*PLMEPGEAGSSTTG Trigger: ACCAGTGGTAGAAGAACCTGCCTCCCCTGGCTCCATCAAAGGCCACAGGCCCATGAGAATCACCCGGCCTGCTCTGAGCAGCACACTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423643.1 |
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| CDS CCA 90 bp | AGCCCTCTGCTCGCACGTTTCCACTTCCTCTCACTTTCCTGTGCGTaGCTGTGGCCTCCGAGTGTGCTGCTCAGAGCAGGCCGGGTGATT | + |
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Preference number: 5 (lower is better) Translates to: SPLLARFHFLSLSCA*LWPPSVLLRAGRVI Trigger: AATCACCCGGCCTGCTCTGAGCAGCACACTCGGAGGCCACAGCCACGCACAGGAAAGTGAGAGGAAGTGGAAACGTGCGAGCAGAGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423643.1 |
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| CDS CCA 90 bp | CTGCTCGCACGTTTCCACTTCCTCTCACTTTCCTGTGCGTGGCTGTaGCCTCCGAGTGTGCTGCTCAGAGCAGGCCGGGTGATTCTCATG | + |
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Preference number: 5 (lower is better) Translates to: LLARFHFLSLSCAWL*PPSVLLRAGRVILM Trigger: CATGAGAATCACCCGGCCTGCTCTGAGCAGCACACTCGGAGGCCACAGCCACGCACAGGAAAGTGAGAGGAAGTGGAAACGTGCGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423643.1 |
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| CDS TCA 90 bp | GTTCTATCGACGTCTGGTGCAATGGAGAAGTCAGGAGATGGTACTTaGATCCTGACTCTGTCACAAGCTGGCTGTGTGACCCTGGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: VLSTSGAMEKSGDGT*ILTLSQAGCVTLGK Trigger: CTTTCCCAGGGTCACACAGCCAGCTTGTGACAGAGTCAGGATTCAAGTACCATCTCCTGACTTCTCCATTGCACCAGACGTCGATAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS CCA 90 bp | CCTGTGGCCTTTGATGGAGCCAGGGGAGGCAGGTTCTTCTACCACTaGTGCTCCCTTGCTCCTGACATCTCTAAATTTTCTAGTATAAAC | + |
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Preference number: 5 (lower is better) Translates to: PVAFDGARGGRFFYH*CSLAPDISKFSSIN Trigger: GTTTATACTAGAAAATTTAGAGATGTCAGGAGCAAGGGAGCACCAGTGGTAGAAGAACCTGCCTCCCCTGGCTCCATCAAAGGCCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423643.1 |
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| CDS CCA 90 bp | TCTCTGTGTTCTATCGACGTCTGGTGCAATGGAGAAGTCAGGAGATaGTACTTGAATCCTGACTCTGTCACAAGCTGGCTGTGTGACCCT | + |
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Preference number: 5 (lower is better) Translates to: SLCSIDVWCNGEVRR*YLNPDSVTSWLCDP Trigger: AGGGTCACACAGCCAGCTTGTGACAGAGTCAGGATTCAAGTACCATCTCCTGACTTCTCCATTGCACCAGACGTCGATAGAACACAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS CCA 90 bp | GCACATTGTTGGGCACAGAAGAGTAGCAACACTCCTTCACATTCATaGCAGGCTTTAGCGTTTACAAAGCACCTCCACCTGCCATTCATG | + |
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Preference number: 5 (lower is better) Translates to: AHCWAQKSSNTPSHS*QALAFTKHLHLPFM Trigger: CATGAATGGCAGGTGGAGGTGCTTTGTAAACGCTAAAGCCTGCCATGAATGTGAAGGAGTGTTGCTACTCTTCTGTGCCCAACAATGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS CCA 90 bp | GCAGACAGAAAAGACTGGGTCCTGGAAGAAGCCTCAGGCACCAATTaGACCTCAGTGTTCTTCACTTCTTTAACTGCTAAATTCACCCAA | + |
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Preference number: 5 (lower is better) Translates to: ADRKDWVLEEASGTN*TSVFFTSLTAKFTQ Trigger: TTGGGTGAATTTAGCAGTTAAAGAAGTGAAGAACACTGAGGTCCAATTGGTGCCTGAGGCTTCTTCCAGGACCCAGTCTTTTCTGTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS TCA 90 bp | AGTGGCCACGTATTCGGCTACATGCCCTGTCATGCTGATGTAGATTaGCTTCCAATACAGGCTAGAGAATTCTCTTTGTATGGATGGACT | + |
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Preference number: 5 (lower is better) Translates to: SGHVFGYMPCHADVD*LPIQAREFSLYGWT Trigger: AGTCCATCCATACAAAGAGAATTCTCTAGCCTGTATTGGAAGTCAATCTACATCAGCATGACAGGGCATGTAGCCGAATACGTGGCCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS TCA 90 bp | ATACAGGCTAGAGAATTCTCTTTGTATGGATGGACTCAGTCTGAGTaGCACATGGTCCATGTCTCTTTGACTCTGGCCATGTTCTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: IQAREFSLYGWTQSE*HMVHVSLTLAMFCK Trigger: TTTGCAGAACATGGCCAGAGTCAAAGAGACATGGACCATGTGTCACTCAGACTGAGTCCATCCATACAAAGAGAATTCTCTAGCCTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS CCA 72 bp | CGTTTCCACTTCCTCTCACTTTCCTGTGCGTGGCTGTaGCCTCCGAGTGTGCTGCTCAGAGCAGGCCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RFHFLSLSCAWL*PPSVLLRAGRV Trigger: CACCCGGCCTGCTCTGAGCAGCACACTCGGAGGCCACAGCCACGCACAGGAAAGTGAGAGGAAGTGGAAACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423643.1 |
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| CDS CCA 72 bp | CTCGCACGTTTCCACTTCCTCTCACTTTCCTGTGCGTaGCTGTGGCCTCCGAGTGTGCTGCTCAGAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LARFHFLSLSCA*LWPPSVLLRAG Trigger: GCCTGCTCTGAGCAGCACACTCGGAGGCCACAGCCACGCACAGGAAAGTGAGAGGAAGTGGAAACGTGCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423643.1 |
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| CDS CAA 90 bp | CGTCTGCCAGCTTTGTTCAGCCAAGTTCCTTTCCCCCTCTTTTCTTaGACAATGAAAGCAGCTTTGGTGCCAACGCTCAGAACTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RLPALFSQVPFPLFS*TMKAALVPTLRTGR Trigger: CCTGCCAGTTCTGAGCGTTGGCACCAAAGCTGCTTTCATTGTCAAAGAAAAGAGGGGGAAAGGAACTTGGCTGAACAAAGCTGGCAGACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000423643.1 ENST00000446091.1 |
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| CDS CAA 72 bp | GACGTCTGGTGCAATGGAGAAGTCAGGAGATGGTACTaGAATCCTGACTCTGTCACAAGCTGGCTGTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: DVWCNGEVRRWY*NPDSVTSWLCD Trigger: GTCACACAGCCAGCTTGTGACAGAGTCAGGATTCAAGTACCATCTCCTGACTTCTCCATTGCACCAGACGTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS CAA 90 bp | TGTTCTATCGACGTCTGGTGCAATGGAGAAGTCAGGAGATGGTACTaGAATCCTGACTCTGTCACAAGCTGGCTGTGTGACCCTGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: CSIDVWCNGEVRRWY*NPDSVTSWLCDPGK Trigger: TTTCCCAGGGTCACACAGCCAGCTTGTGACAGAGTCAGGATTCAAGTACCATCTCCTGACTTCTCCATTGCACCAGACGTCGATAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS CCA 72 bp | TTTGATGGAGCCAGGGGAGGCAGGTTCTTCTACCACTaGTGCTCCCTTGCTCCTGACATCTCTAAATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: FDGARGGRFFYH*CSLAPDISKFS Trigger: AGAAAATTTAGAGATGTCAGGAGCAAGGGAGCACCAGTGGTAGAAGAACCTGCCTCCCCTGGCTCCATCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423643.1 |
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| CDS CCA 72 bp | TCTATCGACGTCTGGTGCAATGGAGAAGTCAGGAGATaGTACTTGAATCCTGACTCTGTCACAAGCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SIDVWCNGEVRR*YLNPDSVTSWL Trigger: CAGCCAGCTTGTGACAGAGTCAGGATTCAAGTACCATCTCCTGACTTCTCCATTGCACCAGACGTCGATAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS CAA 72 bp | GCTTTGTTCAGCCAAGTTCCTTTCCCCCTCTTTTCTTaGACAATGAAAGCAGCTTTGGTGCCAACGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: ALFSQVPFPLFS*TMKAALVPTLR Trigger: TCTGAGCGTTGGCACCAAAGCTGCTTTCATTGTCAAAGAAAAGAGGGGGAAAGGAACTTGGCTGAACAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000423643.1 ENST00000446091.1 |
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| CDS TCA 72 bp | GGTGGAAGCTGTGATTGCCAGGGTCTCTCTAATTTCTaGCGTATCCCGATAAGAGGACAAACTTCTGATAAG | + |
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Preference number: 6 (lower is better) Translates to: GGSCDCQGLSNF*RIPIRGQTSDK Trigger: CTTATCAGAAGTTTGTCCTCTTATCGGGATACGTCAGAAATTAGAGAGACCCTGGCAATCACAGCTTCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS TCA 72 bp | AGAGAATTCTCTTTGTATGGATGGACTCAGTCTGAGTaGCACATGGTCCATGTCTCTTTGACTCTGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: REFSLYGWTQSE*HMVHVSLTLAM Trigger: CATGGCCAGAGTCAAAGAGACATGGACCATGTGTCACTCAGACTGAGTCCATCCATACAAAGAGAATTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS CCA 72 bp | AAAGACTGGGTCCTGGAAGAAGCCTCAGGCACCAATTaGACCTCAGTGTTCTTCACTTCTTTAACTGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: KDWVLEEASGTN*TSVFFTSLTAK Trigger: TTTAGCAGTTAAAGAAGTGAAGAACACTGAGGTCCAATTGGTGCCTGAGGCTTCTTCCAGGACCCAGTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS GCA 72 bp | CTTCTTTTAGGTTCTCTGTGTTCTATCGACGTCTGGTaGAATGGAGAAGTCAGGAGATGGTACTTGAATCCT | + |
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Preference number: 6 (lower is better) Translates to: LLLGSLCSIDVW*NGEVRRWYLNP Trigger: AGGATTCAAGTACCATCTCCTGACTTCTCCATTGCACCAGACGTCGATAGAACACAGAGAACCTAAAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS TCA 72 bp | GTCCATGTCTCTTTGACTCTGGCCATGTTCTGCAAATaGGATGAGATTCCAATAAGAACCAAGAACGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: VHVSLTLAMFCK*DEIPIRTKNVL Trigger: CAAAACGTTCTTGGTTCTTATTGGAATCTCATCTCATTTGCAGAACATGGCCAGAGTCAAAGAGACATGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS CCA 72 bp | TTTCTTCTTTTAGGTTCTCTGTGTTCTATCGACGTCTaGTGCAATGGAGAAGTCAGGAGATGGTACTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: FLLLGSLCSIDV*CNGEVRRWYLN Trigger: ATTCAAGTACCATCTCCTGACTTCTCCATTGCACCAGACGTCGATAGAACACAGAGAACCTAAAAGAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446091.1 |
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| CDS TCA 72 bp | TTACATAAGTTCATTCAAGCTAGCTACCAGAGCTTTTaGGGCATCATTGCTACTTATCATAAAATTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LHKFIQASYQSF*GIIATYHKIVL Trigger: AAGGACAATTTTATGATAAGTAGCAATGATGCCTCAAAAGCTCTGGTAGCTAGCTTGAATGAACTTATGTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423643.1 ENST00000446091.1 |
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