Pregenerated sensors for LINC01987 (Homo sapiens)
Ensembl gene IDs: ENSG00000267790Ensembl transcript IDs: ENST00000593118.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCTCCCGGCTCAGGCGCTGTCCCACACAGGCCTGACAAACTGGGGTaGCTGGACTCTGGGGTGCCTGATGCAGAGCCCAGCCTGAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: PPGSGAVPHRPDKLG*LDSGVPDAEPSLSQ Trigger: CTGACTCAGGCTGGGCTCTGCATCAGGCACCCCAGAGTCCAGGCACCCCAGTTTGTCAGGCCTGTGTGGGACAGCGCCTGAGCCGGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 90 bp | TGGTGTGGGAGCCCTGGGGAAACCGCAATGAGAACGAAGGGACCCTaGCCATCGCTGGTACTGAGAGCCATGTGGGGCAGAGGCTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: WCGSPGETAMRTKGP*PSLVLRAMWGRGCP Trigger: GGGGCAGCCTCTGCCCCACATGGCTCTCAGTACCAGCGATGGGCAGGGTCCCTTCGTTCTCATTGCGGTTTCCCCAGGGCTCCCACACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 90 bp | CACCAACTGGCCTGGCCTAACCACCCTGGGTTCCCAAGGGCTTCCTaGGGCCCTCATCCTAGACAAGGTCGCCGTCACCTCTCACCTGCC | + |
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Preference number: 5 (lower is better) Translates to: HQLAWPNHPGFPRAS*GPHPRQGRRHLSPA Trigger: GGCAGGTGAGAGGTGACGGCGACCTTGTCTAGGATGAGGGCCCCAGGAAGCCCTTGGGAACCCAGGGTGGTTAGGCCAGGCCAGTTGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 90 bp | CCACCGCGCCCAGCCAGGGTCATCGCAGCCACATTGTTGCAGATCTaGGATCTGAGCCCCTGCAGTGTGATCCCAGGCCTGTGCTTTAAT | + |
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Preference number: 5 (lower is better) Translates to: PPRPARVIAATLLQI*DLSPCSVIPGLCFN Trigger: ATTAAAGCACAGGCCTGGGATCACACTGCAGGGGCTCAGATCCCAGATCTGCAACAATGTGGCTGCGATGACCCTGGCTGGGCGCGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 90 bp | GGCTGGTCTTGGCGTCACTATCTGGGCTCTGTGAGTCAGTTGGTTTaGAGGCTGCTGAACACCCTTCAGTGCTGGGGAGCCCCTATGCCA | + |
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Preference number: 5 (lower is better) Translates to: GWSWRHYLGSVSQLV*RLLNTLQCWGAPMP Trigger: TGGCATAGGGGCTCCCCAGCACTGAAGGGTGTTCAGCAGCCTGCAAACCAACTGACTCACAGAGCCCAGATAGTGACGCCAAGACCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 90 bp | AGGGTCATCGCAGCCACATTGTTGCAGATCTGGGATCTGAGCCCCTaGAGTGTGATCCCAGGCCTGTGCTTTAATCACGACACCACCCGC | + |
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Preference number: 5 (lower is better) Translates to: RVIAATLLQIWDLSP*SVIPGLCFNHDTTR Trigger: GCGGGTGGTGTCGTGATTAAAGCACAGGCCTGGGATCACACTGCAGGGGCTCAGATCCCAGATCTGCAACAATGTGGCTGCGATGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 90 bp | TGGGACCATGGGTGGGTGCCGTATCGGCCAAGGGTTTCTTCAAGGTaGGATGGAGACAGGAGCATGTTTGTAGGAAGAGGAGGACAGGAG | + |
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Preference number: 5 (lower is better) Translates to: WDHGWVPYRPRVSSR*DGDRSMFVGRGGQE Trigger: CTCCTGTCCTCCTCTTCCTACAAACATGCTCCTGTCTCCATCCCACCTTGAAGAAACCCTTGGCCGATACGGCACCCACCCATGGTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 90 bp | GACATAGCTCCGTTCCAGTTTGTCAAACATGGCAGCTGCTGCCTTTaGCACGTGCGGTCCCAGCTGCTGGTCACTTGCCAAGGAAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: DIAPFQFVKHGSCCL*HVRSQLLVTCQGSS Trigger: ACTGCTTCCTTGGCAAGTGACCAGCAGCTGGGACCGCACGTGCCAAAGGCAGCAGCTGCCATGTTTGACAAACTGGAACGGAGCTATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 90 bp | CTGTCACCCTGGGTCCCACCTCTATTGGCCAGCAGCCCCATTTCCTaGGACTCTAGGTGCTGTTGGAATTTTGCAAGCGTAACGACCGAC | + |
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Preference number: 5 (lower is better) Translates to: LSPWVPPLLASSPIS*DSRCCWNFASVTTD Trigger: GTCGGTCGTTACGCTTGCAAAATTCCAACAGCACCTAGAGTCCCAGGAAATGGGGCTGCTGGCCAATAGAGGTGGGACCCAGGGTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 90 bp | CTCCCATGGAATTCAGGAAACACTGTTGGCTCTCTAAGGAGCATGTaGCCTGTCACCCTGGGTCCCACCTCTATTGGCCAGCAGCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: LPWNSGNTVGSLRSM*PVTLGPTSIGQQPH Trigger: ATGGGGCTGCTGGCCAATAGAGGTGGGACCCAGGGTGACAGGCCACATGCTCCTTAGAGAGCCAACAGTGTTTCCTGAATTCCATGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 90 bp | TCCATGTCCCCTCGGCAAACTCCCATGGAATTCAGGAAACACTGTTaGCTCTCTAAGGAGCATGTGGCCTGTCACCCTGGGTCCCACCTC | + |
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Preference number: 5 (lower is better) Translates to: SMSPRQTPMEFRKHC*LSKEHVACHPGSHL Trigger: GAGGTGGGACCCAGGGTGACAGGCCACATGCTCCTTAGAGAGCCAACAGTGTTTCCTGAATTCCATGGGAGTTTGCCGAGGGGACATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 90 bp | TGTTTACATTCATGGGGTGGGAGAAGACCTGGTCAGGTTTCAAGGTaGGGGCAGAGTGGGCCTACCCATCAAGAGTGGTACACAGCGTGC | + |
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Preference number: 5 (lower is better) Translates to: CLHSWGGRRPGQVSR*GQSGPTHQEWYTAC Trigger: GCACGCTGTGTACCACTCTTGATGGGTAGGCCCACTCTGCCCGCACCTTGAAACCTGACCAGGTCTTCTCCCACCCCATGAATGTAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 90 bp | GAGCCCAGCCTGAGTCAGGAGGATGGGATTACAAGGCAGCTACGATaGAGGAGGGATGGTCTCGTCCACACTACAGCCTGTTCTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: EPSLSQEDGITRQLR*RRDGLVHTTACSFL Trigger: AAGGAAAGAACAGGCTGTAGTGTGGACGAGACCATCCCTCCTGCATCGTAGCTGCCTTGTAATCCCATCCTCCTGACTCAGGCTGGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 90 bp | AATTTGGACATAGCTCCGTTCCAGTTTGTCAAACATGGCAGCTGCTaGCTTTGGCACGTGCGGTCCCAGCTGCTGGTCACTTGCCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: NLDIAPFQFVKHGSC*LWHVRSQLLVTCQG Trigger: TCCTTGGCAAGTGACCAGCAGCTGGGACCGCACGTGCCAAAGGCAGCAGCTGCCATGTTTGACAAACTGGAACGGAGCTATGTCCAAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 90 bp | GAGTCAGGAGGATGGGATTACAAGGCAGCTACGATGCAGGAGGGATaGTCTCGTCCACACTACAGCCTGTTCTTTCCTTCCAGAGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: ESGGWDYKAATMQEG*SRPHYSLFFPSRVQ Trigger: CTGAACTCTGGAAGGAAAGAACAGGCTGTAGTGTGGACGAGACCATCCCTCCTGCATCGTAGCTGCCTTGTAATCCCATCCTCCTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 90 bp | AGGCTAGTTGTTAAAATGTTTACATTCATGGGGTGGGAGAAGACCTaGTCAGGTTTCAAGGTGCGGGCAGAGTGGGCCTACCCATCAAGA | + |
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Preference number: 5 (lower is better) Translates to: RLVVKMFTFMGWEKT*SGFKVRAEWAYPSR Trigger: TCTTGATGGGTAGGCCCACTCTGCCCGCACCTTGAAACCTGACCAGGTCTTCTCCCACCCCATGAATGTAAACATTTTAACAACTAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 90 bp | CGTGGCCACCGGGTTAGTTTTGTCTCCTTCTCTGTTAGGCGAAACTaGAACAGTAGTTGTGAGGATGAAATGATAAATGCAGCCCCTAGC | + |
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Preference number: 5 (lower is better) Translates to: RGHRVSFVSFSVRRN*NSSCEDEMINAAPS Trigger: GCTAGGGGCTGCATTTATCATTTCATCCTCACAACTACTGTTGCAGTTTCGCCTAACAGAGAAGGAGACAAAACTAACCCGGTGGCCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 90 bp | TCTTGGATGTCAGCCTGTGACTCCATTCTGCAAATGGCTTTGGTCTaGAGTGCCCGATGCACTTACTTTCTCTGTTTTATTAGCCTAGGG | + |
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Preference number: 5 (lower is better) Translates to: SWMSACDSILQMALV*SARCTYFLCFISLG Trigger: CCCTAGGCTAATAAAACAGAGAAAGTAAGTGCATCGGGCACTCCAGACCAAAGCCATTTGCAGAATGGAGTCACAGGCTGACATCCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 72 bp | CCGGCTCAGGCGCTGTCCCACACAGGCCTGACAAACTaGGGTGCCTGGACTCTGGGGTGCCTGATGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PAQALSHTGLTN*GAWTLGCLMQS Trigger: GCTCTGCATCAGGCACCCCAGAGTCCAGGCACCCCAGTTTGTCAGGCCTGTGTGGGACAGCGCCTGAGCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 72 bp | TCAGGCGCTGTCCCACACAGGCCTGACAAACTGGGGTaGCTGGACTCTGGGGTGCCTGATGCAGAGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SGAVPHRPDKLG*LDSGVPDAEPS Trigger: GCTGGGCTCTGCATCAGGCACCCCAGAGTCCAGGCACCCCAGTTTGTCAGGCCTGTGTGGGACAGCGCCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CAA 90 bp | GGGCTTGAGCCACCGCGCCCAGCCAGGGTCATCGCAGCCACATTGTaGCAGATCTGGGATCTGAGCCCCTGCAGTGTGATCCCAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GLEPPRPARVIAATL*QIWDLSPCSVIPGL Trigger: CAGGCCTGGGATCACACTGCAGGGGCTCAGATCCCAGATCTGCAACAATGTGGCTGCGATGACCCTGGCTGGGCGCGGTGGCTCAAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 72 bp | ATGGCAGCTGCTGCCTTTGGCACGTGCGGTCCCAGCTaGTGGTCACTTGCCAAGGAAGCAGTGCCCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: MAAAAFGTCGPS*WSLAKEAVPWA Trigger: TGCCCAGGGCACTGCTTCCTTGGCAAGTGACCAGCAGCTGGGACCGCACGTGCCAAAGGCAGCAGCTGCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 72 bp | GCAGCTGCTGCCTTTGGCACGTGCGGTCCCAGCTGCTaGTCACTTGCCAAGGAAGCAGTGCCCTGGGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: AAAAFGTCGPSC*SLAKEAVPWAE Trigger: TTCTGCCCAGGGCACTGCTTCCTTGGCAAGTGACCAGCAGCTGGGACCGCACGTGCCAAAGGCAGCAGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CAA 72 bp | GAGCCACCGCGCCCAGCCAGGGTCATCGCAGCCACATaGTTGCAGATCTGGGATCTGAGCCCCTGCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: EPPRPARVIAAT*LQIWDLSPCSV Trigger: CACACTGCAGGGGCTCAGATCCCAGATCTGCAACAATGTGGCTGCGATGACCCTGGCTGGGCGCGGTGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CAA 90 bp | CGGAGCGGCTGGTCTTGGCGTCACTATCTGGGCTCTGTGAGTCAGTaGGTTTGCAGGCTGCTGAACACCCTTCAGTGCTGGGGAGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: RSGWSWRHYLGSVSQ*VCRLLNTLQCWGAP Trigger: AGGGGCTCCCCAGCACTGAAGGGTGTTCAGCAGCCTGCAAACCAACTGACTCACAGAGCCCAGATAGTGACGCCAAGACCAGCCGCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 72 bp | AGCCCTGGGGAAACCGCAATGAGAACGAAGGGACCCTaGCCATCGCTGGTACTGAGAGCCATGTGGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SPGETAMRTKGP*PSLVLRAMWGR Trigger: TCTGCCCCACATGGCTCTCAGTACCAGCGATGGGCAGGGTCCCTTCGTTCTCATTGCGGTTTCCCCAGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 72 bp | CCAGCCAGGGTCATCGCAGCCACATTGTTGCAGATCTaGGATCTGAGCCCCTGCAGTGTGATCCCAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PARVIAATLLQI*DLSPCSVIPGL Trigger: CAGGCCTGGGATCACACTGCAGGGGCTCAGATCCCAGATCTGCAACAATGTGGCTGCGATGACCCTGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CAA 90 bp | CGGCTGGTCTTGGCGTCACTATCTGGGCTCTGTGAGTCAGTTGGTTaGCAGGCTGCTGAACACCCTTCAGTGCTGGGGAGCCCCTATGCC | + |
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Preference number: 6 (lower is better) Translates to: RLVLASLSGLCESVG*QAAEHPSVLGSPYA Trigger: GGCATAGGGGCTCCCCAGCACTGAAGGGTGTTCAGCAGCCTGCAAACCAACTGACTCACAGAGCCCAGATAGTGACGCCAAGACCAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CAA 72 bp | TCTCCAGCTCTGATGTTGGCCCCGGAGCGGCTGGTCTaGGCGTCACTATCTGGGCTCTGTGAGTCAGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: SPALMLAPERLV*ASLSGLCESVG Trigger: ACCAACTGACTCACAGAGCCCAGATAGTGACGCCAAGACCAGCCGCTCCGGGGCCAACATCAGAGCTGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CAA 90 bp | GGACATAGCTCCGTTCCAGTTTGTCAAACATGGCAGCTGCTGCCTTaGGCACGTGCGGTCCCAGCTGCTGGTCACTTGCCAAGGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GHSSVPVCQTWQLLP*ARAVPAAGHLPRKQ Trigger: CTGCTTCCTTGGCAAGTGACCAGCAGCTGGGACCGCACGTGCCAAAGGCAGCAGCTGCCATGTTTGACAAACTGGAACGGAGCTATGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 72 bp | TCATGGGGTGGGAGAAGACCTGGTCAGGTTTCAAGGTaGGGGCAGAGTGGGCCTACCCATCAAGAGTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: SWGGRRPGQVSR*GQSGPTHQEWY Trigger: GTACCACTCTTGATGGGTAGGCCCACTCTGCCCGCACCTTGAAACCTGACCAGGTCTTCTCCCACCCCATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 72 bp | TGGCGTCACTATCTGGGCTCTGTGAGTCAGTTGGTTTaGAGGCTGCTGAACACCCTTCAGTGCTGGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: WRHYLGSVSQLV*RLLNTLQCWGA Trigger: GGCTCCCCAGCACTGAAGGGTGTTCAGCAGCCTGCAAACCAACTGACTCACAGAGCCCAGATAGTGACGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 72 bp | GACATAGCTCCGTTCCAGTTTGTCAAACATGGCAGCTaGTGCCTTTGGCACGTGCGGTCCCAGCTGCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: DIAPFQFVKHGS*CLWHVRSQLLV Trigger: GACCAGCAGCTGGGACCGCACGTGCCAAAGGCAGCAGCTGCCATGTTTGACAAACTGGAACGGAGCTATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 72 bp | GAGAAGACCTGGTCAGGTTTCAAGGTGCGGGCAGAGTaGGCCTACCCATCAAGAGTGGTACACAGCGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: EKTWSGFKVRAE*AYPSRVVHSVL Trigger: CAGCACGCTGTGTACCACTCTTGATGGGTAGGCCCACTCTGCCCGCACCTTGAAACCTGACCAGGTCTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 72 bp | CCGTTCCAGTTTGTCAAACATGGCAGCTGCTGCCTTTaGCACGTGCGGTCCCAGCTGCTGGTCACTTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: PFQFVKHGSCCL*HVRSQLLVTCQ Trigger: TTGGCAAGTGACCAGCAGCTGGGACCGCACGTGCCAAAGGCAGCAGCTGCCATGTTTGACAAACTGGAACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS TCA 72 bp | CATGCCCTGTCTTTATCAACAAGAGGCCTTCCTCAGTaGCTGGCGTGCCACTGGCTCAGCTCTCCAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: HALSLSTRGLPQ*LACHWLSSPAL Trigger: CAGAGCTGGAGAGCTGAGCCAGTGGCACGCCAGTCACTGAGGAAGGCCTCTTGTTGATAAAGACAGGGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 72 bp | ATAGCTCCGTTCCAGTTTGTCAAACATGGCAGCTGCTaGCTTTGGCACGTGCGGTCCCAGCTGCTGGTCACT | + |
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Preference number: 6 (lower is better) Translates to: IAPFQFVKHGSC*LWHVRSQLLVT Trigger: AGTGACCAGCAGCTGGGACCGCACGTGCCAAAGGCAGCAGCTGCCATGTTTGACAAACTGGAACGGAGCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CAA 72 bp | CAGGCCTGTGCTTTAATCACGACACCACCCGCCTCCTaGTCCCACGCAGTTAGGATACCTGTTCCTCGTGAG | + |
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Preference number: 6 (lower is better) Translates to: QACALITTPPAS*SHAVRIPVPRE Trigger: CTCACGAGGAACAGGTATCCTAACTGCGTGGGACAAGGAGGCGGGTGGTGTCGTGATTAAAGCACAGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CAA 72 bp | TTGGCGTCACTATCTGGGCTCTGTGAGTCAGTTGGTTaGCAGGCTGCTGAACACCCTTCAGTGCTGGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LASLSGLCESVG*QAAEHPSVLGS Trigger: GCTCCCCAGCACTGAAGGGTGTTCAGCAGCCTGCAAACCAACTGACTCACAGAGCCCAGATAGTGACGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 72 bp | GCAGCCACATTGTTGCAGATCTGGGATCTGAGCCCCTaGAGTGTGATCCCAGGCCTGTGCTTTAATCACGAC | + |
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Preference number: 6 (lower is better) Translates to: AATLLQIWDLSP*SVIPGLCFNHD Trigger: GTCGTGATTAAAGCACAGGCCTGGGATCACACTGCAGGGGCTCAGATCCCAGATCTGCAACAATGTGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 72 bp | GGGTGGGTGCCGTATCGGCCAAGGGTTTCTTCAAGGTaGGATGGAGACAGGAGCATGTTTGTAGGAAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GWVPYRPRVSSR*DGDRSMFVGRG Trigger: TCCTCTTCCTACAAACATGCTCCTGTCTCCATCCCACCTTGAAGAAACCCTTGGCCGATACGGCACCCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CAA 72 bp | TGGTCTTGGCGTCACTATCTGGGCTCTGTGAGTCAGTaGGTTTGCAGGCTGCTGAACACCCTTCAGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: WSWRHYLGSVSQ*VCRLLNTLQCW Trigger: CCAGCACTGAAGGGTGTTCAGCAGCCTGCAAACCAACTGACTCACAGAGCCCAGATAGTGACGCCAAGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CAA 90 bp | ACTCAACGGCTCTGTGCCTTCGGCCACGTGGCCACCGGGTTAGTTTaGTCTCCTTCTCTGTTAGGCGAAACTGCAACAGTAGTTGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: TQRLCAFGHVATGLV*SPSLLGETATVVVR Trigger: CCTCACAACTACTGTTGCAGTTTCGCCTAACAGAGAAGGAGACAAAACTAACCCGGTGGCCACGTGGCCGAAGGCACAGAGCCGTTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 72 bp | GGATGGGATTACAAGGCAGCTACGATGCAGGAGGGATaGTCTCGTCCACACTACAGCCTGTTCTTTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GWDYKAATMQEG*SRPHYSLFFPS Trigger: GGAAGGAAAGAACAGGCTGTAGTGTGGACGAGACCATCCCTCCTGCATCGTAGCTGCCTTGTAATCCCATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 72 bp | TGGGTCCCACCTCTATTGGCCAGCAGCCCCATTTCCTaGGACTCTAGGTGCTGTTGGAATTTTGCAAGCGTA | + |
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Preference number: 6 (lower is better) Translates to: WVPPLLASSPIS*DSRCCWNFASV Trigger: TACGCTTGCAAAATTCCAACAGCACCTAGAGTCCCAGGAAATGGGGCTGCTGGCCAATAGAGGTGGGACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS TCA 72 bp | TTGTGCTCCTGTCTCCAGAGACAGCTGTGCGGTGACTaGACAAGGGGTTTCTTTCTCCCTTTGGGAAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: LCSCLQRQLCGD*TRGFFLPLGRY Trigger: GTACCTTCCCAAAGGGAGAAAGAAACCCCTTGTTCAGTCACCGCACAGCTGTCTCTGGAGACAGGAGCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CAA 90 bp | AGCCAAACGTTTTCACAGCCACTGTGCCCTCTCCTGCCTCCTTTATaGACCGTGGTTGCAATAAATGGCCATGACAGAGACAAGGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SQTFSQPLCPLLPPL*TVVAINGHDRDKAR Trigger: TCTGGCCTTGTCTCTGTCATGGCCATTTATTGCAACCACGGTCAATAAAGGAGGCAGGAGAGGGCACAGTGGCTGTGAAAACGTTTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 72 bp | GTTAAAATGTTTACATTCATGGGGTGGGAGAAGACCTaGTCAGGTTTCAAGGTGCGGGCAGAGTGGGCCTAC | + |
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Preference number: 6 (lower is better) Translates to: VKMFTFMGWEKT*SGFKVRAEWAY Trigger: GTAGGCCCACTCTGCCCGCACCTTGAAACCTGACCAGGTCTTCTCCCACCCCATGAATGTAAACATTTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 72 bp | TTGCATCTGCTGCCTGAAGCCAGCTGGCTAAAGTCTTaGATGTCAGCCTGTGACTCCATTCTGCAAATGGCT | + |
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Preference number: 6 (lower is better) Translates to: LHLLPEASWLKS*MSACDSILQMA Trigger: AGCCATTTGCAGAATGGAGTCACAGGCTGACATCCAAGACTTTAGCCAGCTGGCTTCAGGCAGCAGATGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS CCA 72 bp | GGATGTCAGCCTGTGACTCCATTCTGCAAATGGCTTTaGTCTGGAGTGCCCGATGCACTTACTTTCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: GCQPVTPFCKWL*SGVPDALTFSV Trigger: AACAGAGAAAGTAAGTGCATCGGGCACTCCAGACCAAAGCCATTTGCAGAATGGAGTCACAGGCTGACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 72 bp | TCCATTCTGCAAATGGCTTTGGTCTGGAGTGCCCGATaGACTTACTTTCTCTGTTTTATTAGCCTAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SILQMALVWSAR*TYFLCFISLGK Trigger: CTTCCCTAGGCTAATAAAACAGAGAAAGTAAGTGCATCGGGCACTCCAGACCAAAGCCATTTGCAGAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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| CDS GCA 72 bp | CGGGTTAGTTTTGTCTCCTTCTCTGTTAGGCGAAACTaGAACAGTAGTTGTGAGGATGAAATGATAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: RVSFVSFSVRRN*NSSCEDEMINA Trigger: TGCATTTATCATTTCATCCTCACAACTACTGTTGCAGTTTCGCCTAACAGAGAAGGAGACAAAACTAACCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593118.1 |
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