Pregenerated sensors for LINC01982 (Homo sapiens)

Ensembl gene IDs: ENSG00000263317

Ensembl transcript IDs: ENST00000572848.1, ENST00000640197.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TCTTCCCATAAGCTCTTCCTCCCACTGGTCCAGTGGCCACTAATGTaGGTCTCTCCTCTACTCCCTGGCTGTTGGTCTGGAGGCCTCCGT	+
Preference number: 5 (lower is better) Translates to: SSHKLFLPLVQWPLM*VSPLLPGCWSGGLR Trigger: ACGGAGGCCTCCAGACCAACAGCCAGGGAGTAGAGGAGAGACTCACATTAGTGGCCACTGGACCAGTGGGAGGAAGAGCTTATGGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000572848.1 ENST00000640197.1
CDS CCA 90 bp	CCCACTGGTCCAGTGGCCACTAATGTGAGTCTCTCCTCTACTCCCTaGCTGTTGGTCTGGAGGCCTCCGTTTTTACAGCAGCTCGTATCA	+
Preference number: 5 (lower is better) Translates to: PTGPVATNVSLSSTP*LLVWRPPFLQQLVS Trigger: TGATACGAGCTGCTGTAAAAACGGAGGCCTCCAGACCAACAGCCAGGGAGTAGAGGAGAGACTCACATTAGTGGCCACTGGACCAGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000572848.1 ENST00000640197.1
CDS CCA 90 bp	GTGGCCACTAATGTGAGTCTCTCCTCTACTCCCTGGCTGTTGGTCTaGAGGCCTCCGTTTTTACAGCAGCTCGTATCACAGCAGCTTGCA	+
Preference number: 5 (lower is better) Translates to: VATNVSLSSTPWLLV*RPPFLQQLVSQQLA Trigger: TGCAAGCTGCTGTGATACGAGCTGCTGTAAAAACGGAGGCCTCCAGACCAACAGCCAGGGAGTAGAGGAGAGACTCACATTAGTGGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000572848.1 ENST00000640197.1
CDS TCA 90 bp	GTGCCTTCTGGGATGGGGCCTTTGAGGTCACTCCAAGATGTAACATaGGATGAGCCAAAGAAGTCTCTTCCCATAAGCTCTTCCTCCCAC	+
Preference number: 5 (lower is better) Translates to: VPSGMGPLRSLQDVT*DEPKKSLPISSSSH Trigger: GTGGGAGGAAGAGCTTATGGGAAGAGACTTCTTTGGCTCATCTCATGTTACATCTTGGAGTGACCTCAAAGGCCCCATCCCAGAAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000572848.1 ENST00000640197.1
CDS TCA 90 bp	TTCTGGGATGGGGCCTTTGAGGTCACTCCAAGATGTAACATGAGATaGGCCAAAGAAGTCTCTTCCCATAAGCTCTTCCTCCCACTGGTC	+
Preference number: 5 (lower is better) Translates to: FWDGAFEVTPRCNMR*AKEVSSHKLFLPLV Trigger: GACCAGTGGGAGGAAGAGCTTATGGGAAGAGACTTCTTTGGCTCATCTCATGTTACATCTTGGAGTGACCTCAAAGGCCCCATCCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000572848.1 ENST00000640197.1
CDS CAA 90 bp	GGTCCAGTGGCCACTAATGTGAGTCTCTCCTCTACTCCCTGGCTGTaGGTCTGGAGGCCTCCGTTTTTACAGCAGCTCGTATCACAGCAG	+
Preference number: 6 (lower is better) Translates to: GPVATNVSLSSTPWL*VWRPPFLQQLVSQQ Trigger: CTGCTGTGATACGAGCTGCTGTAAAAACGGAGGCCTCCAGACCAACAGCCAGGGAGTAGAGGAGAGACTCACATTAGTGGCCACTGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000572848.1 ENST00000640197.1
CDS CAA 72 bp	GCCACTAATGTGAGTCTCTCCTCTACTCCCTGGCTGTaGGTCTGGAGGCCTCCGTTTTTACAGCAGCTCGTA	+
Preference number: 6 (lower is better) Translates to: ATNVSLSSTPWL*VWRPPFLQQLV Trigger: TACGAGCTGCTGTAAAAACGGAGGCCTCCAGACCAACAGCCAGGGAGTAGAGGAGAGACTCACATTAGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000572848.1 ENST00000640197.1
CDS CCA 72 bp	AATGTGAGTCTCTCCTCTACTCCCTGGCTGTTGGTCTaGAGGCCTCCGTTTTTACAGCAGCTCGTATCACAG	+
Preference number: 6 (lower is better) Translates to: NVSLSSTPWLLV*RPPFLQQLVSQ Trigger: CTGTGATACGAGCTGCTGTAAAAACGGAGGCCTCCAGACCAACAGCCAGGGAGTAGAGGAGAGACTCACATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000572848.1 ENST00000640197.1
CDS TCA 72 bp	GGGGCCTTTGAGGTCACTCCAAGATGTAACATGAGATaGGCCAAAGAAGTCTCTTCCCATAAGCTCTTCCTC	+
Preference number: 6 (lower is better) Translates to: GAFEVTPRCNMR*AKEVSSHKLFL Trigger: GAGGAAGAGCTTATGGGAAGAGACTTCTTTGGCTCATCTCATGTTACATCTTGGAGTGACCTCAAAGGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000572848.1 ENST00000640197.1