Pregenerated sensors for LINC01975 (Homo sapiens)
Ensembl gene IDs: ENSG00000263312Ensembl transcript IDs: ENST00000571890.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCCTGGAGCGACGCGTTTTTCACCAACAGGCCCTGGGCTCAGTGCTaGGCGCCTCGGCCCGCGAAGCCACACAGCACCAGGGGAGGCGGA | + |
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Preference number: 5 (lower is better) Translates to: AWSDAFFTNRPWAQC*APRPAKPHSTRGGG Trigger: TCCGCCTCCCCTGGTGCTGTGTGGCTTCGCGGGCCGAGGCGCTCAGCACTGAGCCCAGGGCCTGTTGGTGAAAAACGCGTCGCTCCAGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS GCA 90 bp | GCGAGACGGCTCAAGGCCCTCCCATTCCTCGTCCGCGCTCTCAGGTaGCTTTCCGTGCATGAGCGCAGAGCTACATCACTGGCGCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: ARRLKALPFLVRALR*LSVHERRATSLALR Trigger: CCTAAGCGCCAGTGATGTAGCTCTGCGCTCATGCACGGAAAGGCACCTGAGAGCGCGGACGAGGAATGGGAGGGCCTTGAGCCGTCTCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS GCA 90 bp | TCAAGGCCCTCCCATTCCTCGTCCGCGCTCTCAGGTGCCTTTCCGTaGATGAGCGCAGAGCTACATCACTGGCGCTTAGGACGCCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SRPSHSSSALSGAFP*MSAELHHWRLGRLE Trigger: CTCCAGGCGTCCTAAGCGCCAGTGATGTAGCTCTGCGCTCATGCACGGAAAGGCACCTGAGAGCGCGGACGAGGAATGGGAGGGCCTTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS CCA 90 bp | GCGCTCTCAGGTGCCTTTCCGTGCATGAGCGCAGAGCTACATCACTaGCGCTTAGGACGCCTGGAGCGACGCGTTTTTCACCAACAGGCC | + |
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Preference number: 5 (lower is better) Translates to: ALSGAFPCMSAELHH*RLGRLERRVFHQQA Trigger: GGCCTGTTGGTGAAAAACGCGTCGCTCCAGGCGTCCTAAGCGCCAGTGATGTAGCTCTGCGCTCATGCACGGAAAGGCACCTGAGAGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS GCA 90 bp | GGGGAGGCGGAGTCCGGCTTTATTCCCGTTGCTCAGGTAGGCAAATaGAGAGCAGGGCCTGTGCTCCTCACTTCCGCCTCTAAACAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GEAESGFIPVAQVGK*RAGPVLLTSASKQL Trigger: GAGCTGTTTAGAGGCGGAAGTGAGGAGCACAGGCCCTGCTCTGCATTTGCCTACCTGAGCAACGGGAATAAAGCCGGACTCCGCCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS GCA 90 bp | GGATTGGGCGATTCCTCTCTCTGTCTCCCGAGATGTCTGATGCATTaGACACTGGGTCCATTAGCACCTCACAGACAGGGCGAGACGGCT | + |
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Preference number: 5 (lower is better) Translates to: GLGDSSLCLPRCLMH*TLGPLAPHRQGETA Trigger: AGCCGTCTCGCCCTGTCTGTGAGGTGCTAATGGACCCAGTGTGCAATGCATCAGACATCTCGGGAGACAGAGAGAGGAATCGCCCAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS TCA 72 bp | GACGCGTTTTTCACCAACAGGCCCTGGGCTCAGTGCTaGGCGCCTCGGCCCGCGAAGCCACACAGCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: DAFFTNRPWAQC*APRPAKPHSTR Trigger: CCTGGTGCTGTGTGGCTTCGCGGGCCGAGGCGCTCAGCACTGAGCCCAGGGCCTGTTGGTGAAAAACGCGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS CCA 72 bp | TGCCCTGCAGATCCCCTGGGTCCACTGGGCCTGCGCTaGGTGTGCCGTAAGTTATGGCTTCAGGGAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: CPADPLGPLGLR*VCRKLWLQGVS Trigger: GCTGACTCCCTGAAGCCATAACTTACGGCACACCCAGCGCAGGCCCAGTGGACCCAGGGGATCTGCAGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS GCA 72 bp | GCAGATCCCCTGGGTCCACTGGGCCTGCGCTGGGTGTaGCGTAAGTTATGGCTTCAGGGAGTCAGCGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: ADPLGPLGLRWV*RKLWLQGVSVE Trigger: CTCTACGCTGACTCCCTGAAGCCATAACTTACGGCACACCCAGCGCAGGCCCAGTGGACCCAGGGGATCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS GCA 72 bp | CTCAAGGCCCTCCCATTCCTCGTCCGCGCTCTCAGGTaGCTTTCCGTGCATGAGCGCAGAGCTACATCACTG | + |
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Preference number: 6 (lower is better) Translates to: LKALPFLVRALR*LSVHERRATSL Trigger: CAGTGATGTAGCTCTGCGCTCATGCACGGAAAGGCACCTGAGAGCGCGGACGAGGAATGGGAGGGCCTTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS GCA 72 bp | TCCCATTCCTCGTCCGCGCTCTCAGGTGCCTTTCCGTaGATGAGCGCAGAGCTACATCACTGGCGCTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: SHSSSALSGAFP*MSAELHHWRLG Trigger: TCCTAAGCGCCAGTGATGTAGCTCTGCGCTCATGCACGGAAAGGCACCTGAGAGCGCGGACGAGGAATGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS CCA 72 bp | GGTGCCTTTCCGTGCATGAGCGCAGAGCTACATCACTaGCGCTTAGGACGCCTGGAGCGACGCGTTTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: GAFPCMSAELHH*RLGRLERRVFH Trigger: GTGAAAAACGCGTCGCTCCAGGCGTCCTAAGCGCCAGTGATGTAGCTCTGCGCTCATGCACGGAAAGGCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS CAA 90 bp | CGGATTGGGCGATTCCTCTCTCTGTCTCCCGAGATGTCTGATGCATaGCACACTGGGTCCATTAGCACCTCACAGACAGGGCGAGACGGC | + |
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Preference number: 6 (lower is better) Translates to: RIGRFLSLSPEMSDA*HTGSISTSQTGRDG Trigger: GCCGTCTCGCCCTGTCTGTGAGGTGCTAATGGACCCAGTGTGCAATGCATCAGACATCTCGGGAGACAGAGAGAGGAATCGCCCAATCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS TCA 72 bp | CAGAGCCACACTCTCTTTCCTGACAGCTCTCCAGGGTaGCGGATTGGGCGATTCCTCTCTCTGTCTCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: QSHTLFPDSSPG*RIGRFLSLSPE Trigger: CTCGGGAGACAGAGAGAGGAATCGCCCAATCCGTCACCCTGGAGAGCTGTCAGGAAAGAGAGTGTGGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS GCA 72 bp | GAGTCCGGCTTTATTCCCGTTGCTCAGGTAGGCAAATaGAGAGCAGGGCCTGTGCTCCTCACTTCCGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ESGFIPVAQVGK*RAGPVLLTSAS Trigger: AGAGGCGGAAGTGAGGAGCACAGGCCCTGCTCTGCATTTGCCTACCTGAGCAACGGGAATAAAGCCGGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS CAA 72 bp | ACACTCTCTTTCCTGACAGCTCTCCAGGGTGACGGATaGGGCGATTCCTCTCTCTGTCTCCCGAGATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: TLSFLTALQGDG*GDSSLCLPRCL Trigger: CAGACATCTCGGGAGACAGAGAGAGGAATCGCCCAATCCGTCACCCTGGAGAGCTGTCAGGAAAGAGAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS GCA 72 bp | GATTCCTCTCTCTGTCTCCCGAGATGTCTGATGCATTaGACACTGGGTCCATTAGCACCTCACAGACAGGGC | + |
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Preference number: 6 (lower is better) Translates to: DSSLCLPRCLMH*TLGPLAPHRQG Trigger: GCCCTGTCTGTGAGGTGCTAATGGACCCAGTGTGCAATGCATCAGACATCTCGGGAGACAGAGAGAGGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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| CDS CAA 72 bp | CGATTCCTCTCTCTGTCTCCCGAGATGTCTGATGCATaGCACACTGGGTCCATTAGCACCTCACAGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: RFLSLSPEMSDA*HTGSISTSQTG Trigger: CCCTGTCTGTGAGGTGCTAATGGACCCAGTGTGCAATGCATCAGACATCTCGGGAGACAGAGAGAGGAATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571890.1 |
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