Pregenerated sensors for LINC01973 (Homo sapiens)
Ensembl gene IDs: ENSG00000204283Ensembl transcript IDs: ENST00000374983.3, ENST00000664715.1
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGGTGGGGGTCGCCCACCCAACCCAGGCTCACCCCCAATCCCATGTaGAACTGCGCCCACCCGCCATGGCTGCACCCATGGGTGTCACCA | + |
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Preference number: 5 (lower is better) Translates to: GWGSPTQPRLTPNPM*NCAHPPWLHPWVSP Trigger: TGGTGACACCCATGGGTGCAGCCATGGCGGGTGGGCGCAGTTTCACATGGGATTGGGGGTGAGCCTGGGTTGGGTGGGCGACCCCCACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | TCTGGGAGTCTCGGCACAGGGGAGTCTGCCATCGAACCAGCCACCTaGATCAGAGCCGGGTCCACCTCCTCCGTCCCGCTGTGGCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: SGSLGTGESAIEPAT*IRAGSTSSVPLWLF Trigger: AAAGAGCCACAGCGGGACGGAGGAGGTGGACCCGGCTCTGATGCAGGTGGCTGGTTCGATGGCAGACTCCCCTGTGCCGAGACTCCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | CCAGGACCTCCGGATTTGGTCTGGGAGTCTCGGCACAGGGGAGTCTaGCATCGAACCAGCCACCTGCATCAGAGCCGGGTCCACCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: PGPPDLVWESRHRGV*HRTSHLHQSRVHLL Trigger: GAGGAGGTGGACCCGGCTCTGATGCAGGTGGCTGGTTCGATGGCAGACTCCCCTGTGCCGAGACTCCCAGACCAAATCCGGAGGTCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | GTCAGCAGGCCCCGCCCCATCCATGAGCGAGCCAAGGGTAGTATCTaGTCAATGCCGTCACTCCGTGTGGGCCAGCTTCTCCTCGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: VSRPRPIHERAKGSI*SMPSLRVGQLLLAQ Trigger: CTGGGCGAGGAGAAGCTGGCCCACACGGAGTGACGGCATTGAGCAGATACTACCCTTGGCTCGCTCATGGATGGGGCGGGGCCTGCTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | CCTGGCGGACCCACCCACTCTACTCCAGGACCTCCGGATTTGGTCTaGGAGTCTCGGCACAGGGGAGTCTGCCATCGAACCAGCCACCTG | + |
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Preference number: 5 (lower is better) Translates to: PGGPTHSTPGPPDLV*ESRHRGVCHRTSHL Trigger: CAGGTGGCTGGTTCGATGGCAGACTCCCCTGTGCCGAGACTCCCAGACCAAATCCGGAGGTCCTGGAGTAGAGTGGGTGGGTCCGCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | CATGCCCTGGCGGACCCACCCACTCTACTCCAGGACCTCCGGATTTaGTCTGGGAGTCTCGGCACAGGGGAGTCTGCCATCGAACCAGCC | + |
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Preference number: 5 (lower is better) Translates to: HALADPPTLLQDLRI*SGSLGTGESAIEPA Trigger: GGCTGGTTCGATGGCAGACTCCCCTGTGCCGAGACTCCCAGACCAAATCCGGAGGTCCTGGAGTAGAGTGGGTGGGTCCGCCAGGGCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS TCA 90 bp | AGCTGCGGCCAGGCCAGCTCGAGGCGAGACATCAGCCAGTCCTTGTaGAACCTCCCTGCACGGTGGAGACAGACAGAGACAGGGCACCAG | + |
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Preference number: 5 (lower is better) Translates to: SCGQASSRRDISQSL*NLPARWRQTETGHQ Trigger: CTGGTGCCCTGTCTCTGTCTGTCTCCACCGTGCAGGGAGGTTTCACAAGGACTGGCTGATGTCTCGCCTCGAGCTGGCCTGGCCGCAGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | AGGCAGGCGGGGACCTGCTTTTCCCAGGGCTCTCCAGGGAGTCCCTaGACAGCCCTCAAGAGCCTGCCCTGCGTTATCATCCTCAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: RQAGTCFSQGSPGSP*TALKSLPCVIILKV Trigger: GACCTTGAGGATGATAACGCAGGGCAGGCTCTTGAGGGCTGTGCAGGGACTCCCTGGAGAGCCCTGGGAAAAGCAGGTCCCCGCCTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | GGCCCCGCCCCATCCATGAGCGAGCCAAGGGTAGTATCTGCTCAATaGCGTCACTCCGTGTGGGCCAGCTTCTCCTCGCCCAGGAACAAG | + |
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Preference number: 5 (lower is better) Translates to: GPAPSMSEPRVVSAQ*RHSVWASFSSPRNK Trigger: CTTGTTCCTGGGCGAGGAGAAGCTGGCCCACACGGAGTGACGGCATTGAGCAGATACTACCCTTGGCTCGCTCATGGATGGGGCGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | GTCCACGTGGCCGACCAATGGCAGCAGACAGCCCCTCCTGACAGCTaGAGCTTTAGGGGGCCTTCAGAGTGGTTTCCATGGCACCCGTGC | + |
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Preference number: 5 (lower is better) Translates to: VHVADQWQQTAPPDS*SFRGPSEWFPWHPC Trigger: GCACGGGTGCCATGGAAACCACTCTGAAGGCCCCCTAAAGCTGCAGCTGTCAGGAGGGGCTGTCTGCTGCCATTGGTCGGCCACGTGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664715.1 |
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| CDS GCA 90 bp | GCACCCATGGGTGTCACCAGTGGGACAACAGTGCAGGCGTGGCCTTaGTGTAGCATGCCTGGTCCACCTAATGCTTTCCCAGCCCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: APMGVTSGTTVQAWP*CSMPGPPNAFPAPA Trigger: GGCAGGGGCTGGGAAAGCATTAGGTGGACCAGGCATGCTACAGCAAGGCCACGCCTGCACTGTTGTCCCACTGGTGACACCCATGGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | CCCCGAGGATCCCAGCTGGGCTTAGGGTTTCAAGAAAGCCTCAACTaGCCTCCATCCACTCTGCGCTGGACTGAACCAGCTGCCCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: PRGSQLGLGFQESLN*PPSTLRWTEPAAPS Trigger: GGAGGGGGCAGCTGGTTCAGTCCAGCGCAGAGTGGATGGAGGCCAGTTGAGGCTTTCTTGAAACCCTAAGCCCAGCTGGGATCCTCGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS TCA 90 bp | TCGAGCTCCTTTCCTGCAAAGGAGACCATTCTTTGGCTCCTATCATaGGAGGCAGGGAGGCAGGGAGGCAGGGAGGCAGGGAGGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SSSFPAKETILWLLS*EAGRQGGREAGRQG Trigger: GCCCTGCCTCCCTGCCTCCCTGCCTCCCTGCCTCCCTGCCTCTCATGATAGGAGCCAAAGAATGGTCTCCTTTGCAGGAAAGGAGCTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | AAGAAACTTCCTTGGGGGAGTCTCCAGAGACAGGCAGCCTGGCCATaGCCTGGCGGACCCACCCACTCTACTCCAGGACCTCCGGATTTG | + |
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Preference number: 5 (lower is better) Translates to: KKLPWGSLQRQAAWP*PGGPTHSTPGPPDL Trigger: CAAATCCGGAGGTCCTGGAGTAGAGTGGGTGGGTCCGCCAGGGCATGGCCAGGCTGCCTGTCTCTGGAGACTCCCCCAAGGAAGTTTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | AAAGTCACGCATCGTGTTAGGGAGAGGGTCCACGTGGCCGACCAATaGCAGCAGACAGCCCCTCCTGACAGCTGCAGCTTTAGGGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: KVTHRVRERVHVADQ*QQTAPPDSCSFRGP Trigger: AGGCCCCCTAAAGCTGCAGCTGTCAGGAGGGGCTGTCTGCTGCCATTGGTCGGCCACGTGGACCCTCTCCCTAACACGATGCGTGACTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664715.1 |
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| CDS GCA 90 bp | GTGTCACCAGTGGGACAACAGTGCAGGCGTGGCCTTGCTGTAGCATaGCTGGTCCACCTAATGCTTTCCCAGCCCCTGCCTGACCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: VSPVGQQCRRGLAVA*LVHLMLSQPLPDLC Trigger: GCAAAGGTCAGGCAGGGGCTGGGAAAGCATTAGGTGGACCAGGCATGCTACAGCAAGGCCACGCCTGCACTGTTGTCCCACTGGTGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | GCCACTGACTGGGAAGTGCCCAGCCTTGGCCCTAGAGTGGGAAAATaGCCTGGACATGAAATGTGTGGGGACCTGACACCTGTGCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: ATDWEVPSLGPRVGK*PGHEMCGDLTPVLA Trigger: GGCCAGCACAGGTGTCAGGTCCCCACACATTTCATGTCCAGGCCATTTTCCCACTCTAGGGCCAAGGCTGGGCACTTCCCAGTCAGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | CCTTTGCAGAGCGAGAGACCCCACAGTACCAGCTGTGCCACTGACTaGGAAGTGCCCAGCCTTGGCCCTAGAGTGGGAAAATGGCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PLQSERPHSTSCATD*EVPSLGPRVGKWPG Trigger: TCCAGGCCATTTTCCCACTCTAGGGCCAAGGCTGGGCACTTCCCAGTCAGTGGCACAGCTGGTACTGTGGGGTCTCTCGCTCTGCAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | TTCAAAGCCCCAAAGAATAAGCCTGACAAGGCAGAGACAGAAGCATaGGCTGAGAAGGGCCTGGGAGCCCGATTTGCCGGTGGGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: FKAPKNKPDKAETEA*AEKGLGARFAGGPS Trigger: GCTGGGCCCACCGGCAAATCGGGCTCCCAGGCCCTTCTCAGCCCATGCTTCTGTCTCTGCCTTGTCAGGCTTATTCTTTGGGGCTTTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | AGAGCGAGAGACCCCACAGTACCAGCTGTGCCACTGACTGGGAAGTaGCCAGCCTTGGCCCTAGAGTGGGAAAATGGCCTGGACATGAAA | + |
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Preference number: 5 (lower is better) Translates to: RARDPTVPAVPLTGK*PALALEWENGLDMK Trigger: TTTCATGTCCAGGCCATTTTCCCACTCTAGGGCCAAGGCTGGGCACTTCCCAGTCAGTGGCACAGCTGGTACTGTGGGGTCTCTCGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | CCTGGCAGATCACACAGGTCACAGATGCCTCCTCGTCACAGGATGTaGTCGCTGCACCCTGTCCTAACTCCAGTCCTTTCCCTCACCTTC | + |
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Preference number: 5 (lower is better) Translates to: PGRSHRSQMPPRHRM*SLHPVLTPVLSLTF Trigger: GAAGGTGAGGGAAAGGACTGGAGTTAGGACAGGGTGCAGCGACCACATCCTGTGACGAGGAGGCATCTGTGACCTGTGTGATCTGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | CTTGTTTCCCTGGGAAATGACAGAGGGGTACGACGCCAGCGAGCCTaGAGTCTTGACAGGCTGGACGGCCCAATGATTAGACAGTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: LVSLGNDRGVRRQRA*SLDRLDGPMIRQWA Trigger: AGCCCACTGTCTAATCATTGGGCCGTCCAGCCTGTCAAGACTCCAGGCTCGCTGGCGTCGTACCCCTCTGTCATTTCCCAGGGAAACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | CCTCCTGACAGCTGCAGCTTTAGGGGGCCTTCAGAGTGGTTTCCATaGCACCCGTGCCTTCATAATCCTCACCCAAGCGGCTCTCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PPDSCSFRGPSEWFP*HPCLHNPHPSGSPS Trigger: TGAAGGAGAGCCGCTTGGGTGAGGATTATGAAGGCACGGGTGCCATGGAAACCACTCTGAAGGCCCCCTAAAGCTGCAGCTGTCAGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664715.1 |
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| CDS TCA 90 bp | CCACTCTGCGCTGGACTGAACCAGCTGCCCCCTCCCCTTACTCAATaGGAAAGCTCAGGACCCACATGCAAGACAGAGCCTGCAAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: PLCAGLNQLPPPLTQ*ESSGPTCKTEPARE Trigger: TTCTCTTGCAGGCTCTGTCTTGCATGTGGGTCCTGAGCTTTCTCATTGAGTAAGGGGAGGGGGCAGCTGGTTCAGTCCAGCGCAGAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | AGCTGCAGCTTTAGGGGGCCTTCAGAGTGGTTTCCATGGCACCCGTaGCTTCATAATCCTCACCCAAGCGGCTCTCCTTCAGCTCACCTT | + |
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Preference number: 5 (lower is better) Translates to: SCSFRGPSEWFPWHP*LHNPHPSGSPSAHL Trigger: AAGGTGAGCTGAAGGAGAGCCGCTTGGGTGAGGATTATGAAGGCACGGGTGCCATGGAAACCACTCTGAAGGCCCCCTAAAGCTGCAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664715.1 |
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| CDS TCA 90 bp | ACATGTCCCGGGGTGGCCAGTGTTTCCAGCAGTGACACTTGGGATTaGAACCAACCTTTGCAGAGCGAGAGACCCCACAGTACCAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: TCPGVASVSSSDTWD*NQPLQSERPHSTSC Trigger: ACAGCTGGTACTGTGGGGTCTCTCGCTCTGCAAAGGTTGGTTTCAATCCCAAGTGTCACTGCTGGAAACACTGGCCACCCCGGGACATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS TCA 90 bp | GTTTCAAGAAAGCCTCAACTGGCCTCCATCCACTCTGCGCTGGACTaGACCAGCTGCCCCCTCCCCTTACTCAATGAGAAAGCTCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: VSRKPQLASIHSALD*TSCPLPLLNEKAQD Trigger: GTCCTGAGCTTTCTCATTGAGTAAGGGGAGGGGGCAGCTGGTTCAGTCCAGCGCAGAGTGGATGGAGGCCAGTTGAGGCTTTCTTGAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | TGGCCAGTGTTTCCAGCAGTGACACTTGGGATTGAAACCAACCTTTaGAGAGCGAGAGACCCCACAGTACCAGCTGTGCCACTGACTGGG | + |
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Preference number: 5 (lower is better) Translates to: WPVFPAVTLGIETNL*RARDPTVPAVPLTG Trigger: CCCAGTCAGTGGCACAGCTGGTACTGTGGGGTCTCTCGCTCTGCAAAGGTTGGTTTCAATCCCAAGTGTCACTGCTGGAAACACTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | TGTCTCAGTAGCGGGCATAGTAGCAGTACAATGACTTGTGCTGCCTaGCTGGCAGATCACACAGGTCACAGATGCCTCCTCGTCACAGGA | + |
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Preference number: 5 (lower is better) Translates to: CLSSGHSSSTMTCAA*LADHTGHRCLLVTG Trigger: TCCTGTGACGAGGAGGCATCTGTGACCTGTGTGATCTGCCAGGCAGGCAGCACAAGTCATTGTACTGCTACTATGCCCGCTACTGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | AAACAGAGCCCTGCAGAAGGACTGGCAAGACCACATGTCCCGGGGTaGCCAGTGTTTCCAGCAGTGACACTTGGGATTGAAACCAACCTT | + |
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Preference number: 5 (lower is better) Translates to: KQSPAEGLARPHVPG*PVFPAVTLGIETNL Trigger: AAGGTTGGTTTCAATCCCAAGTGTCACTGCTGGAAACACTGGCCACCCCGGGACATGTGGTCTTGCCAGTCCTTCTGCAGGGCTCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | CCCAGCATCTTGGAAGATCTCGGACTAGTGCTCCCTGCAGATGATTaGGACCTAAGAAACAGAGCCCTGCAGAAGGACTGGCAAGACCAC | + |
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Preference number: 5 (lower is better) Translates to: PSILEDLGLVLPADD*DLRNRALQKDWQDH Trigger: GTGGTCTTGCCAGTCCTTCTGCAGGGCTCTGTTTCTTAGGTCCCAATCATCTGCAGGGAGCACTAGTCCGAGATCTTCCAAGATGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | TTAGGGTTTCAAGAAAGCCTCAACTGGCCTCCATCCACTCTGCGCTaGACTGAACCAGCTGCCCCCTCCCCTTACTCAATGAGAAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: LGFQESLNWPPSTLR*TEPAAPSPYSMRKL Trigger: GAGCTTTCTCATTGAGTAAGGGGAGGGGGCAGCTGGTTCAGTCCAGCGCAGAGTGGATGGAGGCCAGTTGAGGCTTTCTTGAAACCCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS TCA 90 bp | CCTCTCTTTGTTCCTGTCTCAGTAGCGGGCATAGTAGCAGTACAATaGCTTGTGCTGCCTGCCTGGCAGATCACACAGGTCACAGATGCC | + |
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Preference number: 5 (lower is better) Translates to: PLFVPVSVAGIVAVQ*LVLPAWQITQVTDA Trigger: GGCATCTGTGACCTGTGTGATCTGCCAGGCAGGCAGCACAAGTCATTGTACTGCTACTATGCCCGCTACTGAGACAGGAACAAAGAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS TCA 90 bp | ACCTTTATCCTACTGACCTGCAGGCAGCATCCTGCACCAGGACTGTaGGGAAGCCAAGAGAAGCCGAGAGCAGGCATAAGATGCAAAACA | + |
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Preference number: 5 (lower is better) Translates to: TFILLTCRQHPAPGL*GSQEKPRAGIRCKT Trigger: TGTTTTGCATCTTATGCCTGCTCTCGGCTTCTCTTGGCTTCCTCACAGTCCTGGTGCAGGATGCTGCCTGCAGGTCAGTAGGATAAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664715.1 |
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| CDS GCA 90 bp | AAGGGTGCATTTCTGCAAATGCACATGTGTGCAAGTGTGTGGACATaGGTGCAAATGGGTGCTAGTGCACAGGTGTGTGGGTGTGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: KGAFLQMHMCASVWT*VQMGASAQVCGCAS Trigger: ACTTGCACACCCACACACCTGTGCACTAGCACCCATTTGCACGCATGTCCACACACTTGCACACATGTGCATTTGCAGAAATGCACCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | TTCTGCAAATGCACATGTGTGCAAGTGTGTGGACATGCGTGCAAATaGGTGCTAGTGCACAGGTGTGTGGGTGTGCAAGTGGATGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: FCKCTCVQVCGHACK*VLVHRCVGVQVDAN Trigger: GTTTGCATCCACTTGCACACCCACACACCTGTGCACTAGCACCCATTTGCACGCATGTCCACACACTTGCACACATGTGCATTTGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | CTCTCTGAGTCATTGTATAAGTTACCACCCATAATGCTCTTGGGATaGTACTTGGCACACAGTAGGTGCACGGAGAAGGCTGGTGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: LSESLYKLPPIMLLG*YLAHSRCTEKAGVP Trigger: CGGGACACCAGCCTTCTCCGTGCACCTACTGTGTGCCAAGTACCATCCCAAGAGCATTATGGGTGGTAACTTATACAATGACTCAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | ATGAAATATACATGGACCAGTGACCGACTGAGATTGAGACTTGACTaGAAGCATCTTCCAAATGGCTGCTGGGAGAGCAGCCCATCCGGC | + |
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Preference number: 5 (lower is better) Translates to: MKYTWTSDRLRLRLD*KHLPNGCWESSPSG Trigger: GCCGGATGGGCTGCTCTCCCAGCAGCCATTTGGAAGATGCTTCCAGTCAAGTCTCAATCTCAGTCGGTCACTGGTCCATGTATATTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664715.1 |
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| CDS GCA 90 bp | GGAGGGAAGGAAGAGCAGAAAAATACCTATGGTAAAAGCCAGCACTaGCCAGCAGACATGTCCAATGGAGAGCACCAAGAGGCAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: GGKEEQKNTYGKSQH*PADMSNGEHQEAET Trigger: TGTTTCTGCCTCTTGGTGCTCTCCATTGGACATGTCTGCTGGGCAGTGCTGGCTTTTACCATAGGTATTTTTCTGCTCTTCCTTCCCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 90 bp | CTGGACGGCCCAATGATTAGACAGTGGGCTCTGGGCCAGCCTGCCTaGGTTCAGATAAAATCAGATCAAATCCATTTGCTGCTTATTAGC | + |
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Preference number: 5 (lower is better) Translates to: LDGPMIRQWALGQPA*VQIKSDQIHLLLIS Trigger: GCTAATAAGCAGCAAATGGATTTGATCTGATTTTATCTGAACCCAGGCAGGCTGGCCCAGAGCCCACTGTCTAATCATTGGGCCGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | TGGATGCAAACGCATATATGTGCACATGTGTTCAATGCATGTGTGTaGAACTGTGCACATGTGTGCAAGTGTGTGTGTGTGAGTGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: WMQTHICAHVFNACV*NCAHVCKCVCVSAL Trigger: CAGGGCACTCACACACACACACTTGCACACATGTGCACAGTTGCACACACATGCATTGAACACATGTGCACATATATGCGTTTGCATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | AACGCATATATGTGCACATGTGTTCAATGCATGTGTGTGCAACTGTaGACATGTGTGCAAGTGTGTGTGTGTGAGTGCCCTGGAAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: NAYMCTCVQCMCVQL*TCVQVCVCECPGKE Trigger: CTCTTTTCCAGGGCACTCACACACACACACTTGCACACATGTGCACAGTTGCACACACATGCATTGAACACATGTGCACATATATGCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 90 bp | GGTGTGCAAGTGGATGCAAACGCATATATGTGCACATGTGTTCAATaGATGTGTGTGCAACTGTGCACATGTGTGCAAGTGTGTGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: GVQVDANAYMCTCVQ*MCVQLCTCVQVCVC Trigger: ACACACACACACTTGCACACATGTGCACAGTTGCACACACATGCATTGAACACATGTGCACATATATGCGTTTGCATCCACTTGCACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 72 bp | CTCGGCACAGGGGAGTCTGCCATCGAACCAGCCACCTaGATCAGAGCCGGGTCCACCTCCTCCGTCCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LGTGESAIEPAT*IRAGSTSSVPL Trigger: CAGCGGGACGGAGGAGGTGGACCCGGCTCTGATGCAGGTGGCTGGTTCGATGGCAGACTCCCCTGTGCCGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 72 bp | AGCCTCGCCCCTCAGAGACTTCCGCTCAGCAGCAGCTaGGGCCAGGCCAGCTCGAGGCGAGACATCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SLAPQRLPLSSS*GQASSRRDISQ Trigger: CTGGCTGATGTCTCGCCTCGAGCTGGCCTGGCCGCAGCTGCTGCTGAGCGGAAGTCTCTGAGGGGCGAGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 72 bp | CCTTGGGGGAGTCTCCAGAGACAGGCAGCCTGGCCATaGCCTGGCGGACCCACCCACTCTACTCCAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: PWGSLQRQAAWP*PGGPTHSTPGP Trigger: AGGTCCTGGAGTAGAGTGGGTGGGTCCGCCAGGGCATGGCCAGGCTGCCTGTCTCTGGAGACTCCCCCAAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CAA 90 bp | CCATGCCCTGGCGGACCCACCCACTCTACTCCAGGACCTCCGGATTaGGTCTGGGAGTCTCGGCACAGGGGAGTCTGCCATCGAACCAGC | + |
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Preference number: 6 (lower is better) Translates to: PCPGGPTHSTPGPPD*VWESRHRGVCHRTS Trigger: GCTGGTTCGATGGCAGACTCCCCTGTGCCGAGACTCCCAGACCAAATCCGGAGGTCCTGGAGTAGAGTGGGTGGGTCCGCCAGGGCATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 72 bp | CCGGATTTGGTCTGGGAGTCTCGGCACAGGGGAGTCTaGCATCGAACCAGCCACCTGCATCAGAGCCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PDLVWESRHRGV*HRTSHLHQSRV Trigger: GACCCGGCTCTGATGCAGGTGGCTGGTTCGATGGCAGACTCCCCTGTGCCGAGACTCCCAGACCAAATCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | CCAGAGGCCAGAGCTGCGGGAACCCCAGTGAGAGTGTaGTTTCCTCTCAGCCTCGCCCCTCAGAGACTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PEARAAGTPVRV*FPLSLAPQRLP Trigger: CGGAAGTCTCTGAGGGGCGAGGCTGAGAGGAAACCACACTCTCACTGGGGTTCCCGCAGCTCTGGCCTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CAA 72 bp | GGCGGACCCACCCACTCTACTCCAGGACCTCCGGATTaGGTCTGGGAGTCTCGGCACAGGGGAGTCTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GGPTHSTPGPPD*VWESRHRGVCH Trigger: ATGGCAGACTCCCCTGTGCCGAGACTCCCAGACCAAATCCGGAGGTCCTGGAGTAGAGTGGGTGGGTCCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS GCA 72 bp | CCCCGCCCCATCCATGAGCGAGCCAAGGGTAGTATCTaGTCAATGCCGTCACTCCGTGTGGGCCAGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PRPIHERAKGSI*SMPSLRVGQLL Trigger: GAGAAGCTGGCCCACACGGAGTGACGGCATTGAGCAGATACTACCCTTGGCTCGCTCATGGATGGGGCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS GCA 72 bp | GACCCCACAGTACCAGCTGTGCCACTGACTGGGAAGTaGCCAGCCTTGGCCCTAGAGTGGGAAAATGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DPTVPAVPLTGK*PALALEWENGL Trigger: CAGGCCATTTTCCCACTCTAGGGCCAAGGCTGGGCACTTCCCAGTCAGTGGCACAGCTGGTACTGTGGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS GCA 72 bp | CCATCCATGAGCGAGCCAAGGGTAGTATCTGCTCAATaGCGTCACTCCGTGTGGGCCAGCTTCTCCTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSMSEPRVVSAQ*RHSVWASFSSP Trigger: GGGCGAGGAGAAGCTGGCCCACACGGAGTGACGGCATTGAGCAGATACTACCCTTGGCTCGCTCATGGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS GCA 72 bp | TGTGCTGCCTGCCTGGCAGATCACACAGGTCACAGATaGCTCCTCGTCACAGGATGTGGTCGCTGCACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CAACLADHTGHR*LLVTGCGRCTL Trigger: CAGGGTGCAGCGACCACATCCTGTGACGAGGAGGCATCTGTGACCTGTGTGATCTGCCAGGCAGGCAGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS GCA 72 bp | GAGGCGAGACATCAGCCAGTCCTTGTGAAACCTCCCTaGACGGTGGAGACAGACAGAGACAGGGCACCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EARHQPVLVKPP*TVETDRDRAPG Trigger: GCCTGGTGCCCTGTCTCTGTCTGTCTCCACCGTGCAGGGAGGTTTCACAAGGACTGGCTGATGTCTCGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS GCA 72 bp | GTGGGACAACAGTGCAGGCGTGGCCTTGCTGTAGCATaGCTGGTCCACCTAATGCTTTCCCAGCCCCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VGQQCRRGLAVA*LVHLMLSQPLP Trigger: AGGCAGGGGCTGGGAAAGCATTAGGTGGACCAGGCATGCTACAGCAAGGCCACGCCTGCACTGTTGTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS GCA 72 bp | GCCGACCAATGGCAGCAGACAGCCCCTCCTGACAGCTaGAGCTTTAGGGGGCCTTCAGAGTGGTTTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: ADQWQQTAPPDS*SFRGPSEWFPW Trigger: CCATGGAAACCACTCTGAAGGCCCCCTAAAGCTGCAGCTGTCAGGAGGGGCTGTCTGCTGCCATTGGTCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664715.1 |
||
| CDS TCA 72 bp | CAGGCCAGCTCGAGGCGAGACATCAGCCAGTCCTTGTaGAACCTCCCTGCACGGTGGAGACAGACAGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: QASSRRDISQSL*NLPARWRQTET Trigger: TGTCTCTGTCTGTCTCCACCGTGCAGGGAGGTTTCACAAGGACTGGCTGATGTCTCGCCTCGAGCTGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | AGCGAGAGACCCCACAGTACCAGCTGTGCCACTGACTaGGAAGTGCCCAGCCTTGGCCCTAGAGTGGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SERPHSTSCATD*EVPSLGPRVGK Trigger: TTTTCCCACTCTAGGGCCAAGGCTGGGCACTTCCCAGTCAGTGGCACAGCTGGTACTGTGGGGTCTCTCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS TCA 72 bp | TTTCCTGCAAAGGAGACCATTCTTTGGCTCCTATCATaGGAGGCAGGGAGGCAGGGAGGCAGGGAGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: FPAKETILWLLS*EAGRQGGREAG Trigger: CCCTGCCTCCCTGCCTCCCTGCCTCCCTGCCTCTCATGATAGGAGCCAAAGAATGGTCTCCTTTGCAGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS GCA 72 bp | GGTGTCACCAGTGGGACAACAGTGCAGGCGTGGCCTTaGTGTAGCATGCCTGGTCCACCTAATGCTTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GVTSGTTVQAWP*CSMPGPPNAFP Trigger: TGGGAAAGCATTAGGTGGACCAGGCATGCTACAGCAAGGCCACGCCTGCACTGTTGTCCCACTGGTGACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | CCACTGACTGGGAAGTGCCCAGCCTTGGCCCTAGAGTaGGAAAATGGCCTGGACATGAAATGTGTGGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: PLTGKCPALALE*ENGLDMKCVGT Trigger: GGTCCCCACACATTTCATGTCCAGGCCATTTTCCCACTCTAGGGCCAAGGCTGGGCACTTCCCAGTCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | CCAAGGGTAGTATCTGCTCAATGCCGTCACTCCGTGTaGGCCAGCTTCTCCTCGCCCAGGAACAAGGGGATT | + |
|
Preference number: 6 (lower is better) Translates to: PRVVSAQCRHSV*ASFSSPRNKGI Trigger: AATCCCCTTGTTCCTGGGCGAGGAGAAGCTGGCCCACACGGAGTGACGGCATTGAGCAGATACTACCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | CTGGGAAATGACAGAGGGGTACGACGCCAGCGAGCCTaGAGTCTTGACAGGCTGGACGGCCCAATGATTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LGNDRGVRRQRA*SLDRLDGPMIR Trigger: TCTAATCATTGGGCCGTCCAGCCTGTCAAGACTCCAGGCTCGCTGGCGTCGTACCCCTCTGTCATTTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | CAAGAAAGCCTCAACTGGCCTCCATCCACTCTGCGCTaGACTGAACCAGCTGCCCCCTCCCCTTACTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: QESLNWPPSTLR*TEPAAPSPYSM Trigger: CATTGAGTAAGGGGAGGGGGCAGCTGGTTCAGTCCAGCGCAGAGTGGATGGAGGCCAGTTGAGGCTTTCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | AGCTGCAGCTTTAGGGGGCCTTCAGAGTGGTTTCCATaGCACCCGTGCCTTCATAATCCTCACCCAAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SCSFRGPSEWFP*HPCLHNPHPSG Trigger: GCCGCTTGGGTGAGGATTATGAAGGCACGGGTGCCATGGAAACCACTCTGAAGGCCCCCTAAAGCTGCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664715.1 |
||
| CDS CAA 72 bp | CCCGTCGAGCTCCTTTCCTGCAAAGGAGACCATTCTTaGGCTCCTATCATGAGAGGCAGGGAGGCAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PVELLSCKGDHS*APIMRGREAGR Trigger: CCTCCCTGCCTCCCTGCCTCTCATGATAGGAGCCAAAGAATGGTCTCCTTTGCAGGAAAGGAGCTCGACGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CAA 72 bp | ATAATCCTCACCCAAGCGGCTCTCCTTCAGCTCACCTaGCGTCACCAAGCTGCATCAGAGCCGGGTCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: IILTQAALLQLT*RHQAASEPGPP Trigger: AGGTGGACCCGGCTCTGATGCAGCTTGGTGACGCAAGGTGAGCTGAAGGAGAGCCGCTTGGGTGAGGATTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664715.1 |
||
| CDS TCA 72 bp | GCTGGACTGAACCAGCTGCCCCCTCCCCTTACTCAATaGGAAAGCTCAGGACCCACATGCAAGACAGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGLNQLPPPLTQ*ESSGPTCKTEP Trigger: AGGCTCTGTCTTGCATGTGGGTCCTGAGCTTTCTCATTGAGTAAGGGGAGGGGGCAGCTGGTTCAGTCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS TCA 72 bp | AAGCCTCAACTGGCCTCCATCCACTCTGCGCTGGACTaGACCAGCTGCCCCCTCCCCTTACTCAATGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: KPQLASIHSALD*TSCPLPLLNEK Trigger: TTTCTCATTGAGTAAGGGGAGGGGGCAGCTGGTTCAGTCCAGCGCAGAGTGGATGGAGGCCAGTTGAGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS GCA 72 bp | CCAGGGAGTCCCTGCACAGCCCTCAAGAGCCTGCCCTaGGTTATCATCCTCAAGGTCAAGAAACTTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGSPCTALKSLP*VIILKVKKLPW Trigger: CCAAGGAAGTTTCTTGACCTTGAGGATGATAACGCAGGGCAGGCTCTTGAGGGCTGTGCAGGGACTCCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | CCCTGCGTTATCATCCTCAAGGTCAAGAAACTTCCTTaGGGGAGTCTCCAGAGACAGGCAGCCTGGCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: PCVIILKVKKLP*GSLQRQAAWPC Trigger: GCATGGCCAGGCTGCCTGTCTCTGGAGACTCCCCCAAGGAAGTTTCTTGACCTTGAGGATGATAACGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | CCTGCAGAAGGACTGGCAAGACCACATGTCCCGGGGTaGCCAGTGTTTCCAGCAGTGACACTTGGGATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PAEGLARPHVPG*PVFPAVTLGIE Trigger: TTCAATCCCAAGTGTCACTGCTGGAAACACTGGCCACCCCGGGACATGTGGTCTTGCCAGTCCTTCTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | GATTGGGACCTAAGAAACAGAGCCCTGCAGAAGGACTaGCAAGACCACATGTCCCGGGGTGGCCAGTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: DWDLRNRALQKD*QDHMSRGGQCF Trigger: GAAACACTGGCCACCCCGGGACATGTGGTCTTGCCAGTCCTTCTGCAGGGCTCTGTTTCTTAGGTCCCAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 72 bp | TCACACAGGTCACAGATGCCTCCTCGTCACAGGATGTaGTCGCTGCACCCTGTCCTAACTCCAGTCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SHRSQMPPRHRM*SLHPVLTPVLS Trigger: GGAAAGGACTGGAGTTAGGACAGGGTGCAGCGACCACATCCTGTGACGAGGAGGCATCTGTGACCTGTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 72 bp | CTGATACCTCAGGGTTGCCCCCACACTGCACAACTCTaGGGATGCCATTTACATCAACAGCCCATGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LIPQGCPHTAQL*GCHLHQQPMVA Trigger: GGCCACCATGGGCTGTTGATGTAAATGGCATCCCCAGAGTTGTGCAGTGTGGGGGCAACCCTGAGGTATCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 72 bp | TCCCAGCTGGGCTTAGGGTTTCAAGAAAGCCTCAACTaGCCTCCATCCACTCTGCGCTGGACTGAACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SQLGLGFQESLN*PPSTLRWTEPA Trigger: AGCTGGTTCAGTCCAGCGCAGAGTGGATGGAGGCCAGTTGAGGCTTTCTTGAAACCCTAAGCCCAGCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 72 bp | CCTCCTGACAGCTGCAGCTTTAGGGGGCCTTCAGAGTaGTTTCCATGGCACCCGTGCCTTCATAATCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PPDSCSFRGPSE*FPWHPCLHNPH Trigger: GTGAGGATTATGAAGGCACGGGTGCCATGGAAACCACTCTGAAGGCCCCCTAAAGCTGCAGCTGTCAGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664715.1 |
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| CDS CAA 72 bp | AGTCCCCTTGAGAGTGAGACTGGGTCCAGTAGACTGTaGTCTGCCCAGTGCCCAGCACAGGGTAGATGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPLESETGSSRL*SAQCPAQGRCP Trigger: TGGACATCTACCCTGTGCTGGGCACTGGGCAGACAACAGTCTACTGGACCCAGTCTCACTCTCAAGGGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374983.3 ENST00000664715.1 |
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| CDS CAA 72 bp | GCCCTGCGTTATCATCCTCAAGGTCAAGAAACTTCCTaGGGGGAGTCTCCAGAGACAGGCAGCCTGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ALRYHPQGQETS*GESPETGSLAM Trigger: CATGGCCAGGCTGCCTGTCTCTGGAGACTCCCCCAAGGAAGTTTCTTGACCTTGAGGATGATAACGCAGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS TCA 72 bp | GGGGTGGCCAGTGTTTCCAGCAGTGACACTTGGGATTaGAACCAACCTTTGCAGAGCGAGAGACCCCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: GVASVSSSDTWD*NQPLQSERPHS Trigger: ACTGTGGGGTCTCTCGCTCTGCAAAGGTTGGTTTCAATCCCAAGTGTCACTGCTGGAAACACTGGCCACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 72 bp | AGCGGGCATAGTAGCAGTACAATGACTTGTGCTGCCTaGCTGGCAGATCACACAGGTCACAGATGCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGHSSSTMTCAA*LADHTGHRCLL Trigger: GAGGAGGCATCTGTGACCTGTGTGATCTGCCAGGCAGGCAGCACAAGTCATTGTACTGCTACTATGCCCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 72 bp | TTTAGGGGGCCTTCAGAGTGGTTTCCATGGCACCCGTaGCTTCATAATCCTCACCCAAGCGGCTCTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FRGPSEWFPWHP*LHNPHPSGSPS Trigger: TGAAGGAGAGCCGCTTGGGTGAGGATTATGAAGGCACGGGTGCCATGGAAACCACTCTGAAGGCCCCCTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664715.1 |
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| CDS CCA 72 bp | GACCAGGGTCACCTGCCATGTCCCTCTGGCATCTGTTaGAGCCACAATAGGGACCTGGAGAATTGTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: DQGHLPCPSGIC*SHNRDLENCSP Trigger: TGGTGAACAATTCTCCAGGTCCCTATTGTGGCTCCAACAGATGCCAGAGGGACATGGCAGGTGACCCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CCA 72 bp | CCGCTCTTCTGCCCTTCTGAAAGCAGAGGCAGGAGGTaGGTCAAGGTAAGAGATTGGCCTCATGACAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLFCPSESRGRR*VKVRDWPHDSK Trigger: CTTGCTGTCATGAGGCCAATCTCTTACCTTGACCCACCTCCTGCCTCTGCTTTCAGAAGGGCAGAAGAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS TCA 72 bp | GTTCCTGTCTCAGTAGCGGGCATAGTAGCAGTACAATaGCTTGTGCTGCCTGCCTGGCAGATCACACAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VPVSVAGIVAVQ*LVLPAWQITQV Trigger: GACCTGTGTGATCTGCCAGGCAGGCAGCACAAGTCATTGTACTGCTACTATGCCCGCTACTGAGACAGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS TCA 72 bp | ATGCCTGGTCCACCTAATGCTTTCCCAGCCCCTGCCTaGCCTTTGCCAAATCTGTCCTTTCTTTCTCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: MPGPPNAFPAPA*PLPNLSFLSQP Trigger: GGGCTGAGAAAGAAAGGACAGATTTGGCAAAGGTCAGGCAGGGGCTGGGAAAGCATTAGGTGGACCAGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS GCA 72 bp | TTTCCAGCAGTGACACTTGGGATTGAAACCAACCTTTaGAGAGCGAGAGACCCCACAGTACCAGCTGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FPAVTLGIETNL*RARDPTVPAVP Trigger: TGGCACAGCTGGTACTGTGGGGTCTCTCGCTCTGCAAAGGTTGGTTTCAATCCCAAGTGTCACTGCTGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | TTGGAAGATCTCGGACTAGTGCTCCCTGCAGATGATTaGGACCTAAGAAACAGAGCCCTGCAGAAGGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LEDLGLVLPADD*DLRNRALQKDW Trigger: CCAGTCCTTCTGCAGGGCTCTGTTTCTTAGGTCCCAATCATCTGCAGGGAGCACTAGTCCGAGATCTTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | ACATGGACCAGTGACCGACTGAGATTGAGACTTGACTaGAAGCATCTTCCAAATGGCTGCTGGGAGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TWTSDRLRLRLD*KHLPNGCWESS Trigger: GCTGCTCTCCCAGCAGCCATTTGGAAGATGCTTCCAGTCAAGTCTCAATCTCAGTCGGTCACTGGTCCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664715.1 |
||
| CDS CAA 72 bp | GGAATGAGCATAGCAGGCTTGTTCCTGCCCAGCATCTaGGAAGATCTCGGACTAGTGCTCCCTGCAGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: GMSIAGLFLPSI*EDLGLVLPADD Trigger: ATCATCTGCAGGGAGCACTAGTCCGAGATCTTCCAAGATGCTGGGCAGGAACAAGCCTGCTATGCTCATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CAA 90 bp | CGGTGCCTCTCTGAGTCATTGTATAAGTTACCACCCATAATGCTCTaGGGATGGTACTTGGCACACAGTAGGTGCACGGAGAAGGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RCLSESLYKLPPIML*GWYLAHSRCTEKAG Trigger: ACCAGCCTTCTCCGTGCACCTACTGTGTGCCAAGTACCATCCCAAGAGCATTATGGGTGGTAACTTATACAATGACTCAGAGAGGCACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | GTCCCTCTGGCATCTGTTGGAGCCACAATAGGGACCTaGAGAATTGTTCACCATAAGGCATTTCCTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VPLASVGATIGT*RIVHHKAFPFL Trigger: CAGGAAAGGAAATGCCTTATGGTGAACAATTCTCCAGGTCCCTATTGTGGCTCCAACAGATGCCAGAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CAA 72 bp | TTGCTCTTAGTTCAGACCCTGCACAGCAGCAGGCAATaGAAAAGGACTTCCGGATACCCGCTCACACTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLVQTLHSSRQ*KRTSGYPLTLS Trigger: TGAAAGTGTGAGCGGGTATCCGGAAGTCCTTTTCAATTGCCTGCTGCTGTGCAGGGTCTGAACTAAGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS GCA 72 bp | GAAGAGCAGAAAAATACCTATGGTAAAAGCCAGCACTaGCCAGCAGACATGTCCAATGGAGAGCACCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EEQKNTYGKSQH*PADMSNGEHQE Trigger: CTCTTGGTGCTCTCCATTGGACATGTCTGCTGGGCAGTGCTGGCTTTTACCATAGGTATTTTTCTGCTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS GCA 72 bp | GTGTTCAATGCATGTGTGTGCAACTGTGCACATGTGTaGAAGTGTGTGTGTGTGAGTGCCCTGGAAAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VFNACVCNCAHV*KCVCVSALEKR Trigger: TCTCTTTTCCAGGGCACTCACACACACACACTTGCACACATGTGCACAGTTGCACACACATGCATTGAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CCA 72 bp | CAGTTTCTTCATCTGATAATCTACCTGCCTCTCTCTTaGACTACAGTCCCCTTGAGAGTGAGACTGGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QFLHLIIYLPLS*TTVPLRVRLGP Trigger: TGGACCCAGTCTCACTCTCAAGGGGACTGTAGTCCAAGAGAGAGGCAGGTAGATTATCAGATGAAGAAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374983.3 ENST00000664715.1 |
||
| CDS CAA 72 bp | TCAGTTTCTTCATCTGATAATCTACCTGCCTCTCTCTaGGACTACAGTCCCCTTGAGAGTGAGACTGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVSSSDNLPASL*DYSPLESETGS Trigger: GGACCCAGTCTCACTCTCAAGGGGACTGTAGTCCAAGAGAGAGGCAGGTAGATTATCAGATGAAGAAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374983.3 ENST00000664715.1 |
||
| CDS CAA 90 bp | TCCAATTTCTTGCTCTTAGTTCAGACCCTGCACAGCAGCAGGCAATaGAAAAGGACTTCCGGATACCCGCTCACACTTTCATCCTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SNFLLLVQTLHSSRQ*KRTSGYPLTLSSFF Trigger: AAAGAAGGATGAAAGTGTGAGCGGGTATCCGGAAGTCCTTTTCAATTGCCTGCTGCTGTGCAGGGTCTGAACTAAGAGCAAGAAATTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
||
| CDS CAA 72 bp | TCTGAGTCATTGTATAAGTTACCACCCATAATGCTCTaGGGATGGTACTTGGCACACAGTAGGTGCACGGAG | + |
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Preference number: 6 (lower is better) Translates to: SESLYKLPPIML*GWYLAHSRCTE Trigger: CTCCGTGCACCTACTGTGTGCCAAGTACCATCCCAAGAGCATTATGGGTGGTAACTTATACAATGACTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CAA 72 bp | CCTGCCTGGGTTCAGATAAAATCAGATCAAATCCATTaGCTGCTTATTAGCTGTGTGGCCAGGACTGGAACC | + |
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Preference number: 6 (lower is better) Translates to: PAWVQIKSDQIH*LLISCVARTGT Trigger: GGTTCCAGTCCTGGCCACACAGCTAATAAGCAGCAAATGGATTTGATCTGATTTTATCTGAACCCAGGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374983.3 |
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| CDS CAA 72 bp | TCCATGAAATATACATGGACCAGTGACCGACTGAGATaGAGACTTGACTGGAAGCATCTTCCAAATGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SMKYTWTSDRLR*RLDWKHLPNGC Trigger: GCAGCCATTTGGAAGATGCTTCCAGTCAAGTCTCAATCTCAGTCGGTCACTGGTCCATGTATATTTCATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664715.1 |
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| CDS CAA 72 bp | AACATAATCCCATTTTCTGCCTCCAACATCTATGGCTaGAAATCTGTGCTGCCTTATGGCATGGAGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: NIIPFSASNIYG*KSVLPYGMEER Trigger: TCTCTCCTCCATGCCATAAGGCAGCACAGATTTCAAGCCATAGATGTTGGAGGCAGAAAATGGGATTATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664715.1 |
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