Pregenerated sensors for LINC01967 (Homo sapiens)
Ensembl gene IDs: ENSG00000235493Ensembl transcript IDs: ENST00000356047.4, ENST00000437506.2, ENST00000643609.1, ENST00000645043.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCCAAGCTTGGGCTGGGAGGGAAGCAGGCTTTATCAGTATGCAGATaGGGCGCTTGGGGCAGGCTGCTAAACCAAACACCCTGTGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: AKLGLGGKQALSVCR*GAWGRLLNQTPCVS Trigger: GCTGACACAGGGTGTTTGGTTTAGCAGCCTGCCCCAAGCGCCTCATCTGCATACTGATAAAGCCTGCTTCCCTCCCAGCCCAAGCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CCA 90 bp | TTTGTTCCCCAAACAGCTTGCATTAGCAATGGCCACTGCCAAGCTTaGGCTGGGAGGGAAGCAGGCTTTATCAGTATGCAGATGAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: FVPQTACISNGHCQA*AGREAGFISMQMRR Trigger: GCGCCTCATCTGCATACTGATAAAGCCTGCTTCCCTCCCAGCCCAAGCTTGGCAGTGGCCATTGCTAATGCAAGCTGTTTGGGGAACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS TCA 90 bp | AGAGTGGCTGTGAGACATGGGAAAAAGCATGGTCTTGGCTCCACGTaGGACATGGACTTGCCTTTAGGTTCTGCCACACAAACTCACTTG | + |
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Preference number: 5 (lower is better) Translates to: RVAVRHGKKHGLGST*DMDLPLGSATQTHL Trigger: CAAGTGAGTTTGTGTGGCAGAACCTAAAGGCAAGTCCATGTCTCACGTGGAGCCAAGACCATGCTTTTTCCCATGTCTCACAGCCACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643609.1 |
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| CDS TCA 90 bp | GGGCTCCTACGCTCCAGAATCATGAGAAAACAAGTTTCTGTTGTTTaGGCCACCCAGTCTGTGGTACCTCATCTTGGCAGCACTAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: GLLRSRIMRKQVSVV*ATQSVVPHLGSTSK Trigger: TTTGCTAGTGCTGCCAAGATGAGGTACCACAGACTGGGTGGCTCAAACAACAGAAACTTGTTTTCTCATGATTCTGGAGCGTAGGAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS GCA 90 bp | CTAAAGGAATCTCAAATCATCCCTTGCTTTCTTTCCTACTGCTACTaGCTTTCTCACGGTTCTTCCTGCTGGTCTTCTTTCCCGTACATC | + |
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Preference number: 5 (lower is better) Translates to: LKESQIIPCFLSYCY*LSHGSSCWSSFPYI Trigger: GATGTACGGGAAAGAAGACCAGCAGGAAGAACCGTGAGAAAGGCAGTAGCAGTAGGAAAGAAAGCAAGGGATGATTTGAGATTCCTTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356047.4 ENST00000437506.2 |
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| CDS CCA 90 bp | TTAAGGTCAAATGAGGCCATATGGTTGGGCCTAATCCAATATGACTaGTGTCCTTATAAGAGTAGGAGATTAGGGCAGGCACACAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: LRSNEAIWLGLIQYD*CPYKSRRLGQAHRE Trigger: CTCTCTGTGTGCCTGCCCTAATCTCCTACTCTTATAAGGACACCAGTCATATTGGATTAGGCCCAACCATATGGCCTCATTTGACCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CCA 90 bp | CTTCATTCATATATCTGGTGCTCCAGTGCCTCTCCTTGTGACTACTaGTCAAATTCAAGGCAATGGAAGAATAGACACAATCTTCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LHSYIWCSSASPCDY*SNSRQWKNRHNLRW Trigger: CCACCGAAGATTGTGTCTATTCTTCCATTGCCTTGAATTTGACCAGTAGTCACAAGGAGAGGCACTGGAGCACCAGATATATGAATGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643609.1 |
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| CDS TCA 90 bp | CTCATTTCTGGCCAGCAAATCAATTCATCCCAGAGAGAAACCAAATaGAATACCACATCTTGCAGTTCACATCCTGGTTCACTTGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LISGQQINSSQRETK*NTTSCSSHPGSLVL Trigger: GAGAACAAGTGAACCAGGATGTGAACTGCAAGATGTGGTATTTCATTTGGTTTCTCTCTGGGATGAATTGATTTGCTGGCCAGAAATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CCA 90 bp | CCAGAGAGAAACCAAATGAAATACCACATCTTGCAGTTCACATCCTaGTTCACTTGTTCTCAAACCAAGTCAATTGATCCCCCATCAGTT | + |
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Preference number: 5 (lower is better) Translates to: PERNQMKYHILQFTS*FTCSQTKSIDPPSV Trigger: AACTGATGGGGGATCAATTGACTTGGTTTGAGAACAAGTGAACCAGGATGTGAACTGCAAGATGTGGTATTTCATTTGGTTTCTCTCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CAA 90 bp | TGGGCTGGGAGGGAAGCAGGCTTTATCAGTATGCAGATGAGGCGCTaGGGGCAGGCTGCTAAACCAAACACCCTGTGTCAGCAGCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: WAGREAGFISMQMRR*GQAAKPNTLCQQPL Trigger: TAAAGGCTGCTGACACAGGGTGTTTGGTTTAGCAGCCTGCCCCAAGCGCCTCATCTGCATACTGATAAAGCCTGCTTCCCTCCCAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CAA 72 bp | AGGGAAGCAGGCTTTATCAGTATGCAGATGAGGCGCTaGGGGCAGGCTGCTAAACCAAACACCCTGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: REAGFISMQMRR*GQAAKPNTLCQ Trigger: CTGACACAGGGTGTTTGGTTTAGCAGCCTGCCCCAAGCGCCTCATCTGCATACTGATAAAGCCTGCTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CCA 72 bp | CAAACAGCTTGCATTAGCAATGGCCACTGCCAAGCTTaGGCTGGGAGGGAAGCAGGCTTTATCAGTATGCAG | + |
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Preference number: 6 (lower is better) Translates to: QTACISNGHCQA*AGREAGFISMQ Trigger: CTGCATACTGATAAAGCCTGCTTCCCTCCCAGCCCAAGCTTGGCAGTGGCCATTGCTAATGCAAGCTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS TCA 72 bp | GTGAGACATGGGAAAAAGCATGGTCTTGGCTCCACGTaGGACATGGACTTGCCTTTAGGTTCTGCCACACAA | + |
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Preference number: 6 (lower is better) Translates to: VRHGKKHGLGST*DMDLPLGSATQ Trigger: TTGTGTGGCAGAACCTAAAGGCAAGTCCATGTCTCACGTGGAGCCAAGACCATGCTTTTTCCCATGTCTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643609.1 |
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| CDS CAA 72 bp | AATACATCATTTGGGACCAGAAGTGTCATGCCCAGGTaGAAGTTGCACCTGAAAGATCCTGTCTGCTATAGG | + |
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Preference number: 6 (lower is better) Translates to: NTSFGTRSVMPR*KLHLKDPVCYR Trigger: CCTATAGCAGACAGGATCTTTCAGGTGCAACTTCAACCTGGGCATGACACTTCTGGTCCCAAATGATGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CAA 90 bp | GCTAATACATCATTTGGGACCAGAAGTGTCATGCCCAGGTTGAAGTaGCACCTGAAAGATCCTGTCTGCTATAGGCTGAATTTTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ANTSFGTRSVMPRLK*HLKDPVCYRLNFAF Trigger: AAAGGCAAAATTCAGCCTATAGCAGACAGGATCTTTCAGGTGCAACTTCAACCTGGGCATGACACTTCTGGTCCCAAATGATGTATTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CAA 90 bp | AAGACGGCTAATACATCATTTGGGACCAGAAGTGTCATGCCCAGGTaGAAGTTGCACCTGAAAGATCCTGTCTGCTATAGGCTGAATTTT | + |
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Preference number: 6 (lower is better) Translates to: KTANTSFGTRSVMPR*KLHLKDPVCYRLNF Trigger: AAAATTCAGCCTATAGCAGACAGGATCTTTCAGGTGCAACTTCAACCTGGGCATGACACTTCTGGTCCCAAATGATGTATTAGCCGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CCA 72 bp | GAAATACCACATCTTGCAGTTCACATCCTGGTTCACTaGCTCTGTGCTGGGTTCTCTCCATTATTTGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: EIPHLAVHILVH*LCAGFSPLFGF Trigger: AAAACCAAATAATGGAGAGAACCCAGCACAGAGCCAGTGAACCAGGATGTGAACTGCAAGATGTGGTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643609.1 |
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| CDS CCA 72 bp | TCACAAATGAAATACCACATCTTGCAGTTCACATCCTaGTTCACTGGCTCTGTGCTGGGTTCTCTCCATTAT | + |
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Preference number: 6 (lower is better) Translates to: SQMKYHILQFTS*FTGSVLGSLHY Trigger: ATAATGGAGAGAACCCAGCACAGAGCCAGTGAACCAGGATGTGAACTGCAAGATGTGGTATTTCATTTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643609.1 |
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| CDS CCA 72 bp | CAGACATTCAGAATGTGTGTCTCCAACAAAGGAACATaGCTGCTGCTTATGGATATCCAGGATGTGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: QTFRMCVSNKGT*LLLMDIQDVSF Trigger: AAAGGACACATCCTGGATATCCATAAGCAGCAGCCATGTTCCTTTGTTGGAGACACACATTCTGAATGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643609.1 |
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| CDS CAA 90 bp | TTCCAGTCTTTCCCATTGATCTCTAAAGGAATCTCAAATCATCCCTaGCTTTCTTTCCTACTGCTACTGCCTTTCTCACGGTTCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: FQSFPLISKGISNHP*LSFLLLLPFSRFFL Trigger: CAGGAAGAACCGTGAGAAAGGCAGTAGCAGTAGGAAAGAAAGCAAGGGATGATTTGAGATTCCTTTAGAGATCAATGGGAAAGACTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356047.4 ENST00000437506.2 |
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| CDS TCA 72 bp | GGCCAGCAAATCAATTCATCCCAGAGAGAAACCAAATaGAATACCACATCTTGCAGTTCACATCCTGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: GQQINSSQRETK*NTTSCSSHPGS Trigger: TGAACCAGGATGTGAACTGCAAGATGTGGTATTTCATTTGGTTTCTCTCTGGGATGAATTGATTTGCTGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS GCA 72 bp | ACATCTTGCAGTTCACATCCTGGTTCACTGGCTCTGTaGTGGGTTCTCTCCATTATTTGGTTTTCTCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: TSCSSHPGSLAL*WVLSIIWFSLL Trigger: TAAAAGAGAAAACCAAATAATGGAGAGAACCCAGCACAGAGCCAGTGAACCAGGATGTGAACTGCAAGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643609.1 |
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| CDS GCA 72 bp | CATTCAGAATGTGTGTCTCCAACAAAGGAACATGGCTaGTGCTTATGGATATCCAGGATGTGTCCTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: HSECVSPTKEHG*CLWISRMCPFL Trigger: AAGAAAAGGACACATCCTGGATATCCATAAGCAGCAGCCATGTTCCTTTGTTGGAGACACACATTCTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643609.1 |
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| CDS CAA 72 bp | TTCCCATTGATCTCTAAAGGAATCTCAAATCATCCCTaGCTTTCTTTCCTACTGCTACTGCCTTTCTCACGG | + |
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Preference number: 6 (lower is better) Translates to: FPLISKGISNHP*LSFLLLLPFSR Trigger: CCGTGAGAAAGGCAGTAGCAGTAGGAAAGAAAGCAAGGGATGATTTGAGATTCCTTTAGAGATCAATGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356047.4 ENST00000437506.2 |
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| CDS CAA 72 bp | TCACATCCTGGTTCACTTGTTCTCAAACCAAGTCAATaGATCCCCCATCAGTTTCTAGACTCCCCTAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SHPGSLVLKPSQ*IPHQFLDSPKV Trigger: AACTTTAGGGGAGTCTAGAAACTGATGGGGGATCAATTGACTTGGTTTGAGAACAAGTGAACCAGGATGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CAA 90 bp | GATGAGTCCTTACAGAGGTATTTAAGGTCAAATGAGGCCATATGGTaGGGCCTAATCCAATATGACTGGTGTCCTTATAAGAGTAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: DESLQRYLRSNEAIW*GLIQYDWCPYKSRR Trigger: TCTCCTACTCTTATAAGGACACCAGTCATATTGGATTAGGCCCAACCATATGGCCTCATTTGACCTTAAATACCTCTGTAAGGACTCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS GCA 72 bp | TCAGAATGTGTGTCTCCAACAAAGGAACATGGCTGCTaGTTATGGATATCCAGGATGTGTCCTTTTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SECVSPTKEHGC*LWISRMCPFLF Trigger: AAAAAGAAAAGGACACATCCTGGATATCCATAAGCAGCAGCCATGTTCCTTTGTTGGAGACACACATTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643609.1 |
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| CDS CAA 72 bp | TTCATCCCAGAGAGAAACCAAATGAAATACCACATCTaGCAGTTCACATCCTGGTTCACTTGTTCTCAAACC | + |
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Preference number: 6 (lower is better) Translates to: FIPERNQMKYHI*QFTSWFTCSQT Trigger: GGTTTGAGAACAAGTGAACCAGGATGTGAACTGCAAGATGTGGTATTTCATTTGGTTTCTCTCTGGGATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CCA 72 bp | AACCAAATGAAATACCACATCTTGCAGTTCACATCCTaGTTCACTTGTTCTCAAACCAAGTCAATTGATCCC | + |
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Preference number: 6 (lower is better) Translates to: NQMKYHILQFTS*FTCSQTKSIDP Trigger: GGGATCAATTGACTTGGTTTGAGAACAAGTGAACCAGGATGTGAACTGCAAGATGTGGTATTTCATTTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CAA 72 bp | TTACAGAGGTATTTAAGGTCAAATGAGGCCATATGGTaGGGCCTAATCCAATATGACTGGTGTCCTTATAAG | + |
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Preference number: 6 (lower is better) Translates to: LQRYLRSNEAIW*GLIQYDWCPYK Trigger: CTTATAAGGACACCAGTCATATTGGATTAGGCCCAACCATATGGCCTCATTTGACCTTAAATACCTCTGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CAA 90 bp | GCAAATCAATTCATCCCAGAGAGAAACCAAATGAAATACCACATCTaGCAGTTCACATCCTGGTTCACTTGTTCTCAAACCAAGTCAATT | + |
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Preference number: 6 (lower is better) Translates to: ANQFIPERNQMKYHI*QFTSWFTCSQTKSI Trigger: AATTGACTTGGTTTGAGAACAAGTGAACCAGGATGTGAACTGCAAGATGTGGTATTTCATTTGGTTTCTCTCTGGGATGAATTGATTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645043.1 |
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| CDS CAA 72 bp | TTTATATGCTGGATTACATTTATTGATTTGCGTATATaGAACAAGCCTTGCATCCCAGGGATGAAGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: FICWITFIDLRI*NKPCIPGMKPT Trigger: AGTGGGCTTCATCCCTGGGATGCAAGGCTTGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356047.4 |
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| CDS CAA 90 bp | ATCACAGCAGGTAAATTCCATGGTGGTTGGATAGGAGATTTCCTCTaGAATGTTCTATTAATAATGATTCGAACTAATTTCCTTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: ITAGKFHGGWIGDFL*NVLLIMIRTNFLSS Trigger: ACTGGAAAGGAAATTAGTTCGAATCATTATTAATAGAACATTCAAGAGGAAATCTCCTATCCAACCACCATGGAATTTACCTGCTGTGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643609.1 |
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| CDS CAA 72 bp | ACTTTCTATATGAAAGCAGTTTTCCAGTCTTTCCCATaGATCTCTAAAGGAATCTCAAATCATCCCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: TFYMKAVFQSFP*ISKGISNHPLL Trigger: AAGCAAGGGATGATTTGAGATTCCTTTAGAGATCAATGGGAAAGACTGGAAAACTGCTTTCATATAGAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356047.4 ENST00000437506.2 |
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