Pregenerated sensors for LINC01966 (Homo sapiens)

Ensembl gene IDs: ENSG00000268580

Ensembl transcript IDs: ENST00000595809.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GGTCTACCCGGTGTCAGAGGCATCCAAATGTATGGCGAGTTACTGTaGTTCTCCGACAGCCTCTGCATCCTGAAAGACTCAACGCTGAAT	+
Preference number: 5 (lower is better) Translates to: GLPGVRGIQMYGELL*FSDSLCILKDSTLN Trigger: ATTCAGCGTTGAGTCTTTCAGGATGCAGAGGCTGTCGGAGAATCACAGTAACTCGCCATACATTTGGATGCCTCTGACACCGGGTAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595809.1
CDS CCA 90 bp	ACTTTTCTTTGCACAAATATAGCCAAACTGCCAGGCAGCAGAGGCTaGAAGTCCAAAATCAAGCTGTCCGAAGGATTGCTTCTTCTGAGG	+
Preference number: 5 (lower is better) Translates to: TFLCTNIAKLPGSRG*KSKIKLSEGLLLLR Trigger: CCTCAGAAGAAGCAATCCTTCGGACAGCTTGATTTTGGACTTCCAGCCTCTGCTGCCTGGCAGTTTGGCTATATTTGTGCAAAGAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000595809.1
CDS TCA 90 bp	AGTTTTCAAGAGTATAATTATTTAGGAAGAAACCTGAATACTTCCTaGGCACTAGGTTATCATATGGTCTACCCGGTGTCAGAGGCATCC	+
Preference number: 5 (lower is better) Translates to: SFQEYNYLGRNLNTS*ALGYHMVYPVSEAS Trigger: GGATGCCTCTGACACCGGGTAGACCATATGATAACCTAGTGCTCAGGAAGTATTCAGGTTTCTTCCTAAATAATTATACTCTTGAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595809.1
CDS TCA 72 bp	GGTGTCAGAGGCATCCAAATGTATGGCGAGTTACTGTaGTTCTCCGACAGCCTCTGCATCCTGAAAGACTCA	+
Preference number: 6 (lower is better) Translates to: GVRGIQMYGELL*FSDSLCILKDS Trigger: TGAGTCTTTCAGGATGCAGAGGCTGTCGGAGAATCACAGTAACTCGCCATACATTTGGATGCCTCTGACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595809.1
CDS CCA 72 bp	ATATGGTCTACCCGGTGTCAGAGGCATCCAAATGTATaGCGAGTTACTGTGATTCTCCGACAGCCTCTGCAT	+
Preference number: 6 (lower is better) Translates to: IWSTRCQRHPNV*RVTVILRQPLH Trigger: ATGCAGAGGCTGTCGGAGAATCACAGTAACTCGCCATACATTTGGATGCCTCTGACACCGGGTAGACCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595809.1
CDS CAA 72 bp	AGAGGCTGGAAGTCCAAAATCAAGCTGTCCGAAGGATaGCTTCTTCTGAGGCCTGTCTCCTTGACCTGTAAA	+
Preference number: 6 (lower is better) Translates to: RGWKSKIKLSEG*LLLRPVSLTCK Trigger: TTTACAGGTCAAGGAGACAGGCCTCAGAAGAAGCAATCCTTCGGACAGCTTGATTTTGGACTTCCAGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595809.1

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