Pregenerated sensors for LINC01964 (Homo sapiens)
Ensembl gene IDs: ENSG00000260840Ensembl transcript IDs: ENST00000567718.1, ENST00000650835.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGTGCCCAGCAACCCTGCACATCTCCACCGGGCTCGACGGCAACCTaGCCTGCGTCTTGGTGGAACACCCTGCAACTCCTCATGGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: GAQQPCTSPPGSTAT*PASWWNTLQLLMEQ Trigger: TTGCTCCATGAGGAGTTGCAGGGTGTTCCACCAAGACGCAGGTCAGGTTGCCGTCGAGCCCGGTGGAGATGTGCAGGGTTGCTGGGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CCA 90 bp | AGAGCTGGCTGCTGCACAGCAGGGCAACCCACTGTCCATGCCATCTaGTGTCCCAACCTTCCAGCCTTGTGTCCTCCTGTGGGACGAGGG | + |
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Preference number: 5 (lower is better) Translates to: RAGCCTAGQPTVHAI*CPNLPALCPPVGRG Trigger: CCCTCGTCCCACAGGAGGACACAAGGCTGGAAGGTTGGGACACCAGATGGCATGGACAGTGGGTTGCCCTGCTGTGCAGCAGCCAGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS TCA 90 bp | CTCCAGATCTGGGACAAGCTCCAGATCAGGCCCAGGCTAGCCGTGTaGCGTTGGAGCAGCTGCTTAACTCTGAGCCTGCCCCTCCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LQIWDKLQIRPRLAV*RWSSCLTLSLPLLL Trigger: CAGCAGGAGGGGCAGGCTCAGAGTTAAGCAGCTGCTCCAACGTCACACGGCTAGCCTGGGCCTGATCTGGAGCTTGTCCCAGATCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CCA 90 bp | GCCAGCAGGGCTGTGTTTCCCAGCACCGTGAGGGTCTTTACAGTTTaGGACCAAACAAGGGTGAAGTTCAGGACGGGGCCACGTGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: ASRAVFPSTVRVFTV*DQTRVKFRTGPREG Trigger: GCCCTCACGTGGCCCCGTCCTGAACTTCACCCTTGTTTGGTCCCAAACTGTAAAGACCCTCACGGTGCTGGGAAACACAGCCCTGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS TCA 90 bp | GGCAGGGCTGCCCCCTTAGTCTGTGAGGCTGGTGATCGGCCACAGTaGATTGGCTCCATATCCACGAAGAGGCAAGGAGGCTCTGCTCTA | + |
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Preference number: 5 (lower is better) Translates to: GRAAPLVCEAGDRPQ*IGSISTKRQGGSAL Trigger: TAGAGCAGAGCCTCCTTGCCTCTTCGTGGATATGGAGCCAATTCACTGTGGCCGATCACCAGCCTCACAGACTAAGGGGGCAGCCCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CCA 90 bp | ACGAAGAGGCAAGGAGGCTCTGCTCTAGTGACCCAGGTCCAAACCTaGGAAGCTCCAGATCTGGGACAAGCTCCAGATCAGGCCCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: TKRQGGSALVTQVQT*EAPDLGQAPDQAQA Trigger: AGCCTGGGCCTGATCTGGAGCTTGTCCCAGATCTGGAGCTTCCCAGGTTTGGACCTGGGTCACTAGAGCAGAGCCTCCTTGCCTCTTCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS TCA 90 bp | AGGGTGAAGTTCAGGACGGGGCCACGTGAGGGCGGTGGACTAACATaGAACAGAAAAGCAATCCGTTGCCCAAACGCCGGACAACTCCCA | + |
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Preference number: 5 (lower is better) Translates to: RVKFRTGPREGGGLT*NRKAIRCPNAGQLP Trigger: TGGGAGTTGTCCGGCGTTTGGGCAACGGATTGCTTTTCTGTTTCATGTTAGTCCACCGCCCTCACGTGGCCCCGTCCTGAACTTCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS GCA 90 bp | GCCACAGTGAATTGGCTCCATATCCACGAAGAGGCAAGGAGGCTCTaGTCTAGTGACCCAGGTCCAAACCTGGGAAGCTCCAGATCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ATVNWLHIHEEARRL*SSDPGPNLGSSRSG Trigger: CCCAGATCTGGAGCTTCCCAGGTTTGGACCTGGGTCACTAGAGCAGAGCCTCCTTGCCTCTTCGTGGATATGGAGCCAATTCACTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS GCA 90 bp | TCCCAGAACAGGCAAATCCATGGACACAGAAAGTGGATTAGTGGTTaGCAGGGGTTGGGCAAGGAGAGAGTGGGGAGTGGCAGCTCGTGT | + |
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Preference number: 5 (lower is better) Translates to: SQNRQIHGHRKWISG*QGLGKERVGSGSSC Trigger: ACACGAGCTGCCACTCCCCACTCTCTCCTTGCCCAACCCCTGGCAACCACTAATCCACTTTCTGTGTCCATGGATTTGCCTGTTCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CCA 90 bp | AGGAGAGAGTGGGGAGTGGCAGCTCGTGTGCACTGGGTTTCTTTCTaGAGTGTTGAAGAGGTTCTCGAATTAGATAATGGCGACGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: RREWGVAARVHWVSF*SVEEVLELDNGDGC Trigger: GCAACCGTCGCCATTATCTAATTCGAGAACCTCTTCAACACTCCAGAAAGAAACCCAGTGCACACGAGCTGCCACTCCCCACTCTCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CCA 90 bp | ACCAAAACCCACCATGTCCACTCGCAGGCGCTTGTCCAGTGGTCCTaGGCAACACATTCTTTTCACACAGCTGTCTTTCAAACTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: TKTHHVHSQALVQWS*ATHSFHTAVFQTAF Trigger: GAAGGCAGTTTGAAAGACAGCTGTGTGAAAAGAATGTGTTGCCCAGGACCACTGGACAAGCGCCTGCGAGTGGACATGGTGGGTTTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650835.1 |
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| CDS TCA 90 bp | AATATTTGCAGTTGGCTTTGCAGAGCTCTCATTACAGCGAAGGTGTaGGGGTGTCTGTTGCCACCCGCTTTTGAGAGAGAGGCACTGAGC | + |
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Preference number: 5 (lower is better) Translates to: NICSWLCRALITAKV*GCLLPPAFEREALS Trigger: GCTCAGTGCCTCTCTCTCAAAAGCGGGTGGCAACAGACACCCTCACACCTTCGCTGTAATGAGAGCTCTGCAAAGCCAACTGCAAATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CCA 90 bp | AGGGGTTGGGCAAGGAGAGAGTGGGGAGTGGCAGCTCGTGTGCACTaGGTTTCTTTCTGGAGTGTTGAAGAGGTTCTCGAATTAGATAAT | + |
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Preference number: 5 (lower is better) Translates to: RGWARREWGVAARVH*VSFWSVEEVLELDN Trigger: ATTATCTAATTCGAGAACCTCTTCAACACTCCAGAAAGAAACCCAGTGCACACGAGCTGCCACTCCCCACTCTCTCCTTGCCCAACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS TCA 90 bp | AAGACAGAAGCTCGCCTAATCCTTGGAACAAGAGGCAGCAGATCCTaGGAAGTTTCTGCTTGTGTTTGTCGGCAAGGAGATGGCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: KTEARLILGTRGSRS*EVSACVCRQGDGFS Trigger: GCTGAAGCCATCTCCTTGCCGACAAACACAAGCAGAAACTTCTCAGGATCTGCTGCCTCTTGTTCCAAGGATTAGGCGAGCTTCTGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CCA 90 bp | TCCAGCTGCCTCTTCTGTCCTCAAGACAGAAGCTCGCCTAATCCTTaGAACAAGAGGCAGCAGATCCTGAGAAGTTTCTGCTTGTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: SSCLFCPQDRSSPNP*NKRQQILRSFCLCL Trigger: CAAACACAAGCAGAAACTTCTCAGGATCTGCTGCCTCTTGTTCCAAGGATTAGGCGAGCTTCTGTCTTGAGGACAGAAGAGGCAGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CCA 90 bp | TTTCACACAGCTGTCTTTCAAACTGCCTTCAGCTCTGGTAGAGTCTaGCCACCAAGGATTGGGGTGGGTTGGTTGATTACTCCACGAATC | + |
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Preference number: 5 (lower is better) Translates to: FHTAVFQTAFSSGRV*PPRIGVGWLITPRI Trigger: GATTCGTGGAGTAATCAACCAACCCACCCCAATCCTTGGTGGCCAGACTCTACCAGAGCTGAAGGCAGTTTGAAAGACAGCTGTGTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650835.1 |
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| CDS TCA 90 bp | TCTCATTACAGCGAAGGTGTGAGGGTGTCTGTTGCCACCCGCTTTTaGGAGAGAGGCACTGAGCACTACAACAGCACAGCTAATGTTTAT | + |
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Preference number: 5 (lower is better) Translates to: SHYSEGVRVSVATRF*ERGTEHYNSTANVY Trigger: ATAAACATTAGCTGTGCTGTTGTAGTGCTCAGTGCCTCTCTCTCAAAAGCGGGTGGCAACAGACACCCTCACACCTTCGCTGTAATGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS GCA 90 bp | GGGACACAAGGAGCGACATGTCATGCTGATTTAGCTTTTGCTGTCTaGGTATGTAACAACCTGTCCAAATCCATGTGGCTCAATGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: GTQGATCHADLAFAV*VCNNLSKSMWLNVS Trigger: GGAGACATTGAGCCACATGGATTTGGACAGGTTGTTACATACGCAGACAGCAAAAGCTAAATCAGCATGACATGTCGCTCCTTGTGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CCA 90 bp | TTAGCTTTTGCTGTCTGCGTATGTAACAACCTGTCCAAATCCATGTaGCTCAATGTCTCCCTACAGACAAATCTATGGAAGTGTGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LAFAVCVCNNLSKSM*LNVSLQTNLWKCGW Trigger: CCAGCCACACTTCCATAGATTTGTCTGTAGGGAGACATTGAGCCACATGGATTTGGACAGGTTGTTACATACGCAGACAGCAAAAGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS TCA 90 bp | AAAAGTCAGTCGCAAAACGCCACAGAGTATATGATTCCATTTAAATaGAATTCCCAGAACAGGCAAATCCATGGACACAGAAAGTGGATT | + |
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Preference number: 5 (lower is better) Translates to: KSQSQNATEYMIPFK*NSQNRQIHGHRKWI Trigger: AATCCACTTTCTGTGTCCATGGATTTGCCTGTTCTGGGAATTTCATTTAAATGGAATCATATACTCTGTGGCGTTTTGCGACTGACTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CCA 72 bp | CCGGCAGGCCAGGACTCCAGAGCTACGGAGGACAAGTaGTGGCGCGATTATCGTAGCGAGCAGCACGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: PAGQDSRATEDK*WRDYRSEQHGG Trigger: CCCACCGTGCTGCTCGCTACGATAATCGCGCCACCACTTGTCCTCCGTAGCTCTGGAGTCCTGGCCTGCCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS GCA 72 bp | GTGGCCCTGTGCATCGCTGCCGTGAGTGGTCTCACCTaGCTCCCCACCCTTTTGGAACTGCTGCAAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: VALCIAAVSGLT*LPTLLELLQGH Trigger: ATGGCCTTGCAGCAGTTCCAAAAGGGTGGGGAGGCAGGTGAGACCACTCACGGCAGCGATGCACAGGGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CCA 72 bp | GCAGGCCAGGACTCCAGAGCTACGGAGGACAAGTGGTaGCGCGATTATCGTAGCGAGCAGCACGGTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: AGQDSRATEDKW*RDYRSEQHGGS Trigger: ACTCCCACCGTGCTGCTCGCTACGATAATCGCGCCACCACTTGTCCTCCGTAGCTCTGGAGTCCTGGCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS TCA 72 bp | TGGGACAAGCTCCAGATCAGGCCCAGGCTAGCCGTGTaGCGTTGGAGCAGCTGCTTAACTCTGAGCCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: WDKLQIRPRLAV*RWSSCLTLSLP Trigger: GGGCAGGCTCAGAGTTAAGCAGCTGCTCCAACGTCACACGGCTAGCCTGGGCCTGATCTGGAGCTTGTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS GCA 72 bp | AGCTGGCTGCTGCACAGCAGGGCAACCCACTGTCCATaGCATCTGGTGTCCCAACCTTCCAGCCTTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SWLLHSRATHCP*HLVSQPSSLVS Trigger: GGACACAAGGCTGGAAGGTTGGGACACCAGATGGCATGGACAGTGGGTTGCCCTGCTGTGCAGCAGCCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CAA 72 bp | CAAGCTCCAGATCAGGCCCAGGCTAGCCGTGTGACGTaGGAGCAGCTGCTTAACTCTGAGCCTGCCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: QAPDQAQASRVT*EQLLNSEPAPP Trigger: AGGAGGGGCAGGCTCAGAGTTAAGCAGCTGCTCCAACGTCACACGGCTAGCCTGGGCCTGATCTGGAGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CAA 90 bp | GATCTGGGACAAGCTCCAGATCAGGCCCAGGCTAGCCGTGTGACGTaGGAGCAGCTGCTTAACTCTGAGCCTGCCCCTCCTGCTGCACAA | + |
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Preference number: 6 (lower is better) Translates to: DLGQAPDQAQASRVT*EQLLNSEPAPPAAQ Trigger: TTGTGCAGCAGGAGGGGCAGGCTCAGAGTTAAGCAGCTGCTCCAACGTCACACGGCTAGCCTGGGCCTGATCTGGAGCTTGTCCCAGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CCA 72 bp | TGCTGCACAGCAGGGCAACCCACTGTCCATGCCATCTaGTGTCCCAACCTTCCAGCCTTGTGTCCTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: CCTAGQPTVHAI*CPNLPALCPPV Trigger: CACAGGAGGACACAAGGCTGGAAGGTTGGGACACCAGATGGCATGGACAGTGGGTTGCCCTGCTGTGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CAA 72 bp | ACTGTCCATGCCATCTGGTGTCCCAACCTTCCAGCCTaGTGTCCTCCTGTGGGACGAGGGACACAAGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: TVHAIWCPNLPA*CPPVGRGTQGA Trigger: CGCTCCTTGTGTCCCTCGTCCCACAGGAGGACACAAGGCTGGAAGGTTGGGACACCAGATGGCATGGACAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS TCA 72 bp | GCCCCCTTAGTCTGTGAGGCTGGTGATCGGCCACAGTaGATTGGCTCCATATCCACGAAGAGGCAAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: APLVCEAGDRPQ*IGSISTKRQGG Trigger: GCCTCCTTGCCTCTTCGTGGATATGGAGCCAATTCACTGTGGCCGATCACCAGCCTCACAGACTAAGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CCA 72 bp | TCTGGTGTCCCAACCTTCCAGCCTTGTGTCCTCCTGTaGGACGAGGGACACAAGGAGCGACATGTCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: SGVPTFQPCVLL*DEGHKERHVML Trigger: CAGCATGACATGTCGCTCCTTGTGTCCCTCGTCCCACAGGAGGACACAAGGCTGGAAGGTTGGGACACCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CCA 72 bp | GCTAAGTCTGTAGAGTGCTCGGTTGCAGTTGAGAGCTaGCTGCTGCACAGCAGGGCAACCCACTGTCCATGC | + |
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Preference number: 6 (lower is better) Translates to: AKSVECSVAVES*LLHSRATHCPC Trigger: GCATGGACAGTGGGTTGCCCTGCTGTGCAGCAGCCAGCTCTCAACTGCAACCGAGCACTCTACAGACTTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CAA 90 bp | AGGCAAATCCATGGACACAGAAAGTGGATTAGTGGTTGCCAGGGGTaGGGCAAGGAGAGAGTGGGGAGTGGCAGCTCGTGTGCACTGGGT | + |
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Preference number: 6 (lower is better) Translates to: RQIHGHRKWISGCQG*GKERVGSGSSCALG Trigger: ACCCAGTGCACACGAGCTGCCACTCCCCACTCTCTCCTTGCCCAACCCCTGGCAACCACTAATCCACTTTCTGTGTCCATGGATTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS TCA 72 bp | TTCAGGACGGGGCCACGTGAGGGCGGTGGACTAACATaGAACAGAAAAGCAATCCGTTGCCCAAACGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: FRTGPREGGGLT*NRKAIRCPNAG Trigger: TCCGGCGTTTGGGCAACGGATTGCTTTTCTGTTTCATGTTAGTCCACCGCCCTCACGTGGCCCCGTCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS GCA 72 bp | TTACTGATGATAAAAGTGCGTGTCAGGGACCAGCTCTaGCAGGTGCCCAGCAACCCTGCACATCTCCACCGG | + |
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Preference number: 6 (lower is better) Translates to: LLMIKVRVRDQL*QVPSNPAHLHR Trigger: CCGGTGGAGATGTGCAGGGTTGCTGGGCACCTGGCAGAGCTGGTCCCTGACACGCACTTTTATCATCAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CCA 72 bp | CAAGGAGGCTCTGCTCTAGTGACCCAGGTCCAAACCTaGGAAGCTCCAGATCTGGGACAAGCTCCAGATCAG | + |
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Preference number: 6 (lower is better) Translates to: QGGSALVTQVQT*EAPDLGQAPDQ Trigger: CTGATCTGGAGCTTGTCCCAGATCTGGAGCTTCCCAGGTTTGGACCTGGGTCACTAGAGCAGAGCCTCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CCA 72 bp | TCCATGTGGCTCAATGTCTCCCTACAGACAAATCTATaGAAGTGTGGCTGGCCAGCCCCACAGCTGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SMWLNVSLQTNL*KCGWPAPQLQG Trigger: CCCCTGCAGCTGTGGGGCTGGCCAGCCACACTTCCATAGATTTGTCTGTAGGGAGACATTGAGCCACATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CAA 72 bp | GGCTGTGTTTCCCAGCACCGTGAGGGTCTTTACAGTTaGGGACCAAACAAGGGTGAAGTTCAGGACGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GCVSQHREGLYS*GPNKGEVQDGA Trigger: GGCCCCGTCCTGAACTTCACCCTTGTTTGGTCCCAAACTGTAAAGACCCTCACGGTGCTGGGAAACACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CAA 72 bp | GCTGCCGTGAGTGGTCTCACCTGCCTCCCCACCCTTTaGGAACTGCTGCAAGGCCATTTCTCATCGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: AAVSGLTCLPTL*ELLQGHFSSIF Trigger: GAAGATCGATGAGAAATGGCCTTGCAGCAGTTCCAAAAGGGTGGGGAGGCAGGTGAGACCACTCACGGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS TCA 72 bp | AGCGAAGGTGTGAGGGTGTCTGTTGCCACCCGCTTTTaGGAGAGAGGCACTGAGCACTACAACAGCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: SEGVRVSVATRF*ERGTEHYNSTA Trigger: AGCTGTGCTGTTGTAGTGCTCAGTGCCTCTCTCTCAAAAGCGGGTGGCAACAGACACCCTCACACCTTCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS GCA 72 bp | AATTGGCTCCATATCCACGAAGAGGCAAGGAGGCTCTaGTCTAGTGACCCAGGTCCAAACCTGGGAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: NWLHIHEEARRL*SSDPGPNLGSS Trigger: GGAGCTTCCCAGGTTTGGACCTGGGTCACTAGAGCAGAGCCTCCTTGCCTCTTCGTGGATATGGAGCCAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS GCA 72 bp | AAGTTACGTCTGCAGGTGCCTGCTAAGTCTGTAGAGTaGTCGGTTGCAGTTGAGAGCTGGCTGCTGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: KLRLQVPAKSVE*SVAVESWLLHS Trigger: GCTGTGCAGCAGCCAGCTCTCAACTGCAACCGAGCACTCTACAGACTTAGCAGGCACCTGCAGACGTAACTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS GCA 72 bp | GTTGGGCAAGGAGAGAGTGGGGAGTGGCAGCTCGTGTaGACTGGGTTTCTTTCTGGAGTGTTGAAGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: VGQGESGEWQLV*TGFLSGVLKRF Trigger: GAACCTCTTCAACACTCCAGAAAGAAACCCAGTGCACACGAGCTGCCACTCCCCACTCTCTCCTTGCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CCA 72 bp | GCTGTGTTTCCCAGCACCGTGAGGGTCTTTACAGTTTaGGACCAAACAAGGGTGAAGTTCAGGACGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: AVFPSTVRVFTV*DQTRVKFRTGP Trigger: TGGCCCCGTCCTGAACTTCACCCTTGTTTGGTCCCAAACTGTAAAGACCCTCACGGTGCTGGGAAACACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CAA 90 bp | CTGTGCATCGCTGCCGTGAGTGGTCTCACCTGCCTCCCCACCCTTTaGGAACTGCTGCAAGGCCATTTCTCATCGATCTTCCTAGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LCIAAVSGLTCLPTL*ELLQGHFSSIFLVS Trigger: AGAAACTAGGAAGATCGATGAGAAATGGCCTTGCAGCAGTTCCAAAAGGGTGGGGAGGCAGGTGAGACCACTCACGGCAGCGATGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS TCA 72 bp | GCAAGGCCATTTCTCATCGATCTTCCTAGTTTCTGTTaGGCGCAGCGCTTTCCTCCTCTCTCCCCACTCCCA | + |
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Preference number: 6 (lower is better) Translates to: ARPFLIDLPSFC*AQRFPPLSPLP Trigger: TGGGAGTGGGGAGAGAGGAGGAAAGCGCTGCGCTCAACAGAAACTAGGAAGATCGATGAGAAATGGCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CCA 72 bp | GCTCAATGTCTCCCTACAGACAAATCTATGGAAGTGTaGCTGGCCAGCCCCACAGCTGCAGGGGTAATCTCT | + |
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Preference number: 6 (lower is better) Translates to: AQCLPTDKSMEV*LASPTAAGVIS Trigger: AGAGATTACCCCTGCAGCTGTGGGGCTGGCCAGCCACACTTCCATAGATTTGTCTGTAGGGAGACATTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CCA 72 bp | GCAAGGAGAGAGTGGGGAGTGGCAGCTCGTGTGCACTaGGTTTCTTTCTGGAGTGTTGAAGAGGTTCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: ARREWGVAARVH*VSFWSVEEVLE Trigger: TTCGAGAACCTCTTCAACACTCCAGAAAGAAACCCAGTGCACACGAGCTGCCACTCCCCACTCTCTCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CCA 72 bp | AAAACCCACCATGTCCACTCGCAGGCGCTTGTCCAGTaGTCCTGGGCAACACATTCTTTTCACACAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: KTHHVHSQALVQ*SWATHSFHTAV Trigger: GACAGCTGTGTGAAAAGAATGTGTTGCCCAGGACCACTGGACAAGCGCCTGCGAGTGGACATGGTGGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650835.1 |
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| CDS TCA 72 bp | AGTTGGCTTTGCAGAGCTCTCATTACAGCGAAGGTGTaGGGGTGTCTGTTGCCACCCGCTTTTGAGAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: SWLCRALITAKV*GCLLPPAFERE Trigger: CTCTCTCTCAAAAGCGGGTGGCAACAGACACCCTCACACCTTCGCTGTAATGAGAGCTCTGCAAAGCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS TCA 72 bp | CCCTCCTGCTGCACAAGTCCCTGCTGGCTGTGTGGATaGGCAGAAATAATGTCCATGAAGGCATCACAAGGT | + |
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Preference number: 6 (lower is better) Translates to: PSCCTSPCWLCG*AEIMSMKASQG Trigger: ACCTTGTGATGCCTTCATGGACATTATTTCTGCTCATCCACACAGCCAGCAGGGACTTGTGCAGCAGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CAA 72 bp | GGGCGGTGGACTAACATGAAACAGAAAAGCAATCCGTaGCCCAAACGCCGGACAACTCCCAAAGGTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: GRWTNMKQKSNP*PKRRTTPKGPC Trigger: ACAAGGACCTTTGGGAGTTGTCCGGCGTTTGGGCAACGGATTGCTTTTCTGTTTCATGTTAGTCCACCGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CAA 72 bp | GGTAGAGTCTGGCCACCAAGGATTGGGGTGGGTTGGTaGATTACTCCACGAATCCTAGGCCTTCTTCAACCA | + |
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Preference number: 6 (lower is better) Translates to: GRVWPPRIGVGW*ITPRILGLLQP Trigger: TGGTTGAAGAAGGCCTAGGATTCGTGGAGTAATCAACCAACCCACCCCAATCCTTGGTGGCCAGACTCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650835.1 |
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| CDS CCA 72 bp | TCTGGTAGAGTCTGGCCACCAAGGATTGGGGTGGGTTaGTTGATTACTCCACGAATCCTAGGCCTTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: SGRVWPPRIGVG*LITPRILGLLQ Trigger: TTGAAGAAGGCCTAGGATTCGTGGAGTAATCAACCAACCCACCCCAATCCTTGGTGGCCAGACTCTACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650835.1 |
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| CDS CCA 72 bp | GCTGTCTTTCAAACTGCCTTCAGCTCTGGTAGAGTCTaGCCACCAAGGATTGGGGTGGGTTGGTTGATTACT | + |
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Preference number: 6 (lower is better) Translates to: AVFQTAFSSGRV*PPRIGVGWLIT Trigger: AGTAATCAACCAACCCACCCCAATCCTTGGTGGCCAGACTCTACCAGAGCTGAAGGCAGTTTGAAAGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650835.1 |
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| CDS CAA 72 bp | TGGAACAAGAGGCAGCAGATCCTGAGAAGTTTCTGCTaGTGTTTGTCGGCAAGGAGATGGCTTCAGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: WNKRQQILRSFC*CLSARRWLQQW Trigger: CCACTGCTGAAGCCATCTCCTTGCCGACAAACACAAGCAGAAACTTCTCAGGATCTGCTGCCTCTTGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CCA 72 bp | TGGGGAGTGGCAGCTCGTGTGCACTGGGTTTCTTTCTaGAGTGTTGAAGAGGTTCTCGAATTAGATAATGGC | + |
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Preference number: 6 (lower is better) Translates to: WGVAARVHWVSF*SVEEVLELDNG Trigger: GCCATTATCTAATTCGAGAACCTCTTCAACACTCCAGAAAGAAACCCAGTGCACACGAGCTGCCACTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS TCA 72 bp | CCAGGAAAATTAGTTACCCTTCCTGTTTACCCTCCCTaGGCTTGCTTCTGCCTCTGTAAAGTGGCCCAGTTA | + |
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Preference number: 6 (lower is better) Translates to: PGKLVTLPVYPP*ACFCLCKVAQL Trigger: TAACTGGGCCACTTTACAGAGGCAGAAGCAAGCTCAGGGAGGGTAAACAGGAAGGGTAACTAATTTTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS GCA 72 bp | GGAGCGACATGTCATGCTGATTTAGCTTTTGCTGTCTaGGTATGTAACAACCTGTCCAAATCCATGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GATCHADLAFAV*VCNNLSKSMWL Trigger: GAGCCACATGGATTTGGACAGGTTGTTACATACGCAGACAGCAAAAGCTAAATCAGCATGACATGTCGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS CCA 72 bp | GGCACTGAGCACTACAACAGCACAGCTAATGTTTATTaGACCCTTCGTTCGATCCAGGAATTTAGATGGACT | + |
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Preference number: 6 (lower is better) Translates to: GTEHYNSTANVY*TLRSIQEFRWT Trigger: AGTCCATCTAAATTCCTGGATCGAACGAAGGGTCCAATAAACATTAGCTGTGCTGTTGTAGTGCTCAGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567718.1 ENST00000650835.1 |
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| CDS CCA 72 bp | GCTGTCTGCGTATGTAACAACCTGTCCAAATCCATGTaGCTCAATGTCTCCCTACAGACAAATCTATGGAAG | + |
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Preference number: 6 (lower is better) Translates to: AVCVCNNLSKSM*LNVSLQTNLWK Trigger: CTTCCATAGATTTGTCTGTAGGGAGACATTGAGCCACATGGATTTGGACAGGTTGTTACATACGCAGACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS TCA 72 bp | GGGAAATATGGGGCTAGGACACGTAAAGTCACTCGATaGCTTTTAGAAATATTAGCCTGTGACCACATATAC | + |
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Preference number: 6 (lower is better) Translates to: GKYGARTRKVTR*LLEILACDHIY Trigger: GTATATGTGGTCACAGGCTAATATTTCTAAAAGTCATCGAGTGACTTTACGTGTCCTAGCCCCATATTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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| CDS TCA 72 bp | TCGCAAAACGCCACAGAGTATATGATTCCATTTAAATaGAATTCCCAGAACAGGCAAATCCATGGACACAGA | + |
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Preference number: 6 (lower is better) Translates to: SQNATEYMIPFK*NSQNRQIHGHR Trigger: TCTGTGTCCATGGATTTGCCTGTTCTGGGAATTTCATTTAAATGGAATCATATACTCTGTGGCGTTTTGCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567718.1 |
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