Pregenerated sensors for LINC01962 (Homo sapiens)
Ensembl gene IDs: ENSG00000248473Ensembl transcript IDs: ENST00000513771.1, ENST00000655600.1, ENST00000658296.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGTCCACGAGTCCGAGGAGCCCCGGGAGCGCTAGTGCCCGAACGTaGTGGCAGGCTCCTGGCCTCTCCCGAGCGAATCCATCCCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: GSTSPRSPGSASART*WQAPGLSRANPSRS Trigger: AGACCGGGATGGATTCGCTCGGGAGAGGCCAGGAGCCTGCCAGCACGTTCGGGCACTAGCGCTCCCGGGGCTCCTCGGACTCGTGGACCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CCA 90 bp | CCCGGTCTTGACCCACGGTCTCGGCTCTTTGGACCGGAGCAGGCATaGGTGAGAGAGGGAAGCGCATACCTCCCGGCCGGAGCCGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: PGLDPRSRLFGPEQA*VREGSAYLPAGAAD Trigger: GTCTGCGGCTCCGGCCGGGAGGTATGCGCTTCCCTCTCTCACCCATGCCTGCTCCGGTCCAAAGAGCCGAGACCGTGGGTCAAGACCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS TCA 90 bp | TGCTGGCAGGCTCCTGGCCTCTCCCGAGCGAATCCATCCCGGTCTTaGCCCACGGTCTCGGCTCTTTGGACCGGAGCAGGCATGGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: CWQAPGLSRANPSRS*PTVSALWTGAGMGE Trigger: CTCACCCATGCCTGCTCCGGTCCAAAGAGCCGAGACCGTGGGTCAAGACCGGGATGGATTCGCTCGGGAGAGGCCAGGAGCCTGCCAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS GCA 90 bp | CCTGCTCGATCCACTCGAGTAGCAGGCAGGAGCGTCCATCCGTTCTaGAGCCTGGGCGCCCCTTCCCAAGCGAGTCCAAGAAAGGCGCAA | + |
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Preference number: 5 (lower is better) Translates to: PARSTRVAGRSVHPF*SLGAPSQASPRKAQ Trigger: TTGCGCCTTTCTTGGACTCGCTTGGGAAGGGGCGCCCAGGCTGCAGAACGGATGGACGCTCCTGCCTGCTACTCGAGTGGATCGAGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS TCA 90 bp | AAACGCTCCCTATGTCCTGTGTCCTCTGGTCTCCTGGAATCCGAATaGGCGCCTCCCTGCTCGATCCACTCGAGTAGCAGGCAGGAGCGT | + |
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Preference number: 5 (lower is better) Translates to: KRSLCPVSSGLLESE*APPCSIHSSSRQER Trigger: ACGCTCCTGCCTGCTACTCGAGTGGATCGAGCAGGGAGGCGCTCATTCGGATTCCAGGAGACCAGAGGACACAGGACATAGGGAGCGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS TCA 90 bp | TTTCTCTTCTCTGGTTCACCGGACAGGGATTCCGTTTTCGAACCTTaGGCTACCCTGGAGTGGTCCCGGTATAAGCCGCGGCCCCACCTG | + |
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Preference number: 5 (lower is better) Translates to: FLFSGSPDRDSVFEP*ATLEWSRYKPRPHL Trigger: CAGGTGGGGCCGCGGCTTATACCGGGACCACTCCAGGGTAGCTCAAGGTTCGAAAACGGAATCCCTGTCCGGTGAACCAGAGAAGAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS GCA 90 bp | AGAGCCCCCACAACCCTCAAGAGCATACTCTCACGTGCAGGTCTGTaGCCAAAGTCTTCACAGCAACTGTTGCTTCCGGGACGGCTCGCT | + |
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Preference number: 5 (lower is better) Translates to: RAPTTLKSILSRAGL*PKSSQQLLLPGRLA Trigger: AGCGAGCCGTCCCGGAAGCAACAGTTGCTGTGAAGACTTTGGGCACAGACCTGCACGTGAGAGTATGCTCTTGAGGGTTGTGGGGGCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655600.1 ENST00000658296.1 |
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| CDS CCA 90 bp | CCACACAGGGTAAACGCTCCCTATGTCCTGTGTCCTCTGGTCTCCTaGAATCCGAATGAGCGCCTCCCTGCTCGATCCACTCGAGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: PHRVNAPYVLCPLVS*NPNERLPARSTRVA Trigger: TGCTACTCGAGTGGATCGAGCAGGGAGGCGCTCATTCGGATTCCAGGAGACCAGAGGACACAGGACATAGGGAGCGTTTACCCTGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS CCA 90 bp | CATCATAGTCATGGGACCACTGTCATGCACGTGTCCCTCCTTGCCTaGAAGGTTGCTGTGCAGCGCATGACGGCACTTCCATGTCAGCGG | + |
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Preference number: 5 (lower is better) Translates to: HHSHGTTVMHVSLLA*KVAVQRMTALPCQR Trigger: CCGCTGACATGGAAGTGCCGTCATGCGCTGCACAGCAACCTTCCAGGCAAGGAGGGACACGTGCATGACAGTGGTCCCATGACTATGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CCA 90 bp | AGCGGTCTAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGGCGTaGGTTCGAATCCCACCGCTGCCAGTTTGTGGTAGTTTTGTCACT | + |
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Preference number: 5 (lower is better) Translates to: SGLRRWIKAPVSSGA*VRIPPLPVCGSFVT Trigger: AGTGACAAAACTACCACAAACTGGCAGCGGTGGGATTCGAACCCACGCCCCCGAAGAGACTGGAGCCTTAATCCAGCGCCTTAGACCGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS GCA 90 bp | GTGCAGCACACTGCAGTTCTTGGTAAGGATCCTCTTCCTGATTTCTaGCCAGCTGCCTTCTCACTGTATCCCCACGAGAGAGGGAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: VQHTAVLGKDPLPDF*PAAFSLYPHERGRG Trigger: TCCTCTCCCTCTCTCGTGGGGATACAGTGAGAAGGCAGCTGGGCAGAAATCAGGAAGAGGATCCTTACCAAGAACTGCAGTGTGCTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS TCA 90 bp | AGGCTGAAAGCGAATGTGACAGGTAGAGCCGTTACTCCCGGGTCATaGATGTGGCCGTCTGCGCTTTTCCGTGTTAACTCCACAGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: RLKANVTGRAVTPGS*MWPSALFRVNSTGR Trigger: TCTTCCTGTGGAGTTAACACGGAAAAGCGCAGACGGCCACATTCATGACCCGGGAGTAACGGCTCTACCTGTCACATTCGCTTTCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000513771.1 ENST00000658296.1 |
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| CDS TCA 90 bp | CTATCCACGATTCTTTCCAATCCCCAGCACTCCCGGAAATCTTGGTaGTGCCTCCGCTGGACATCTTTCGGGATCAAAACCTGGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: LSTILSNPQHSRKSW*CLRWTSFGIKTWES Trigger: GGACTCCCAGGTTTTGATCCCGAAAGATGTCCAGCGGAGGCATCACCAAGATTTCCGGGAGTGCTGGGGATTGGAAAGAATCGTGGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CCA 90 bp | ATGTTGGTGTCTGTGAGTCAAGTCCCATTGGCACACATGTCCCATTaGCACACGGCGCCTCCCTCTCATTATGTGTCACCTTTACTGGCT | + |
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Preference number: 5 (lower is better) Translates to: MLVSVSQVPLAHMSH*HTAPPSHYVSPLLA Trigger: AGCCAGTAAAGGTGACACATAATGAGAGGGAGGCGCCGTGTGCCAATGGGACATGTGTGCCAATGGGACTTGACTCACAGACACCAACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS TCA 90 bp | CTATCCACGATTCTTTCCAATCCCCAGCACTCCCGGAAATCTTGGTaGTGCCTCCGCTGGACATCTTTCGGGATCAAAACCCTAGACCAA | + |
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Preference number: 5 (lower is better) Translates to: LSTILSNPQHSRKSW*CLRWTSFGIKTLDQ Trigger: TTGGTCTAGGGTTTTGATCCCGAAAGATGTCCAGCGGAGGCATCACCAAGATTTCCGGGAGTGCTGGGGATTGGAAAGAATCGTGGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS GCA 90 bp | TGGTTGGGAATGGAAAGCAAAAGCGTAGATGCCCTCTTCTCTTTGTaGCGCTGTGACCACCAGGTGGACATACTAGTGGGATCTTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: WLGMESKSVDALFSL*RCDHQVDILVGSSR Trigger: CCTAGAAGATCCCACTAGTATGTCCACCTGGTGGTCACAGCGGCACAAAGAGAAGAGGGCATCTACGCTTTTGCTTTCCATTCCCAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS TCA 90 bp | TTCATGGCTCGATTCACCGAAAAGGCGGATTTCCGTCTGGCAGCTTaGACCCATTCTCAAGGTCTTATAGTCTCCCAAGCCCAACTTGTC | + |
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Preference number: 5 (lower is better) Translates to: FMARFTEKADFRLAA*THSQGLIVSQAQLV Trigger: GACAAGTTGGGCTTGGGAGACTATAAGACCTTGAGAATGGGTTCAAGCTGCCAGACGGAAATCCGCCTTTTCGGTGAATCGAGCCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS TCA 90 bp | ATAATATTGTCTGCTAGCAGCTACTCTCCGGGTACGTTCGACAAGTaGTCCCTAGCTGTAAAAGGAGAGCCCCCACAACCCTCAAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: IILSASSYSPGTFDK*SLAVKGEPPQPSRA Trigger: TGCTCTTGAGGGTTGTGGGGGCTCTCCTTTTACAGCTAGGGATCACTTGTCGAACGTACCCGGAGAGTAGCTGCTAGCAGACAATATTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655600.1 ENST00000658296.1 |
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| CDS GCA 90 bp | ACATTGATTTCTCACAGTTTCGCAGGCTGGAAGTCTAGATCAGGGTaGAGCACACTGCAGTTCTTGGTAAGGATCCTCTTCCTGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: TLISHSFAGWKSRSG*STLQFLVRILFLIS Trigger: AGAAATCAGGAAGAGGATCCTTACCAAGAACTGCAGTGTGCTGCACCCTGATCTAGACTTCCAGCCTGCGAAACTGTGAGAAATCAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS GCA 72 bp | CGCCTCCACCTGTGCCCAGGCCTCCAAAGTGCGCGGTaGGGGGAAGACGGAGGCGGGAGCCGTCCCGAGACC | + |
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Preference number: 6 (lower is better) Translates to: RLHLCPGLQSAR*GEDGGGSRPET Trigger: GGTCTCGGGACGGCTCCCGCCTCCGTCTTCCCCGCACCGCGCACTTTGGAGGCCTGGGCACAGGTGGAGGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CCA 72 bp | CCGAGGAGCCCCGGGAGCGCTAGTGCCCGAACGTGCTaGCAGGCTCCTGGCCTCTCCCGAGCGAATCCATCC | + |
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Preference number: 6 (lower is better) Translates to: PRSPGSASARTC*QAPGLSRANPS Trigger: GGATGGATTCGCTCGGGAGAGGCCAGGAGCCTGCCAGCACGTTCGGGCACTAGCGCTCCCGGGGCTCCTCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS GCA 72 bp | AGTCCGAGGAGCCCCGGGAGCGCTAGTGCCCGAACGTaGTGGCAGGCTCCTGGCCTCTCCCGAGCGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: SPRSPGSASART*WQAPGLSRANP Trigger: TGGATTCGCTCGGGAGAGGCCAGGAGCCTGCCAGCACGTTCGGGCACTAGCGCTCCCGGGGCTCCTCGGACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CCA 72 bp | GGCGGGAAGGGGCGCGGTAGTGCCATCGTCTCCCCCTaGAGAGAGGGAAGGAGACACGAGGGCGAGTCCCTA | + |
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Preference number: 6 (lower is better) Translates to: GGKGRGSAIVSP*REGRRHEGESL Trigger: TAGGGACTCGCCCTCGTGTCTCCTTCCCTCTCTCCAGGGGGAGACGATGGCACTACCGCGCCCCTTCCCGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS TCA 72 bp | GCTCCTGGCCTCTCCCGAGCGAATCCATCCCGGTCTTaGCCCACGGTCTCGGCTCTTTGGACCGGAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: APGLSRANPSRS*PTVSALWTGAG Trigger: GCCTGCTCCGGTCCAAAGAGCCGAGACCGTGGGTCAAGACCGGGATGGATTCGCTCGGGAGAGGCCAGGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CCA 72 bp | GACCCACGGTCTCGGCTCTTTGGACCGGAGCAGGCATaGGTGAGAGAGGGAAGCGCATACCTCCCGGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: DPRSRLFGPEQA*VREGSAYLPAG Trigger: TCCGGCCGGGAGGTATGCGCTTCCCTCTCTCACCCATGCCTGCTCCGGTCCAAAGAGCCGAGACCGTGGGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CAA 72 bp | GGCTCCTGGCCTCTCCCGAGCGAATCCATCCCGGTCTaGACCCACGGTCTCGGCTCTTTGGACCGGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GSWPLPSESIPV*THGLGSLDRSR Trigger: CCTGCTCCGGTCCAAAGAGCCGAGACCGTGGGTCAAGACCGGGATGGATTCGCTCGGGAGAGGCCAGGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CCA 72 bp | AGCGCAGTGCTGAGAGGGAAGGAACGCCGGACCGGCTaGGTGAGGAGCCCCCAGAAGCCGCTCTTACCGTTT | + |
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Preference number: 6 (lower is better) Translates to: SAVLRGKERRTG*VRSPQKPLLPF Trigger: AAACGGTAAGAGCGGCTTCTGGGGGCTCCTCACCCAGCCGGTCCGGCGTTCCTTCCCTCTCAGCACTGCGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS CAA 90 bp | AGCCTGGGCGCCCCTTCCCAAGCGAGTCCAAGAAAGGCGCAAATCTaGAGGCCCAGGGGCAGGACACAGAGGTTGGTAGAGCCGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SLGAPSQASPRKAQI*RPRGRTQRLVEPEG Trigger: GCCCTCCGGCTCTACCAACCTCTGTGTCCTGCCCCTGGGCCTCAAGATTTGCGCCTTTCTTGGACTCGCTTGGGAAGGGGCGCCCAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS GCA 72 bp | TCCACTCGAGTAGCAGGCAGGAGCGTCCATCCGTTCTaGAGCCTGGGCGCCCCTTCCCAAGCGAGTCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: STRVAGRSVHPF*SLGAPSQASPR Trigger: TCTTGGACTCGCTTGGGAAGGGGCGCCCAGGCTGCAGAACGGATGGACGCTCCTGCCTGCTACTCGAGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS CCA 72 bp | CGGACAGGGATTCCGTTTTCGAACCTTGAGCTACCCTaGAGTGGTCCCGGTATAAGCCGCGGCCCCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: RTGIPFSNLELP*SGPGISRGPTW Trigger: CCAGGTGGGGCCGCGGCTTATACCGGGACCACTCCAGGGTAGCTCAAGGTTCGAAAACGGAATCCCTGTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS GCA 72 bp | TTTTCCGTGTTAACTCCACAGGAAGAAATCAGACCTTaGAGCACGGAGGCGGCGGGGACCCGAAGGCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: FSVLTPQEEIRP*STEAAGTRRPR Trigger: CCTCGGCCTTCGGGTCCCCGCCGCCTCCGTGCTGCAAGGTCTGATTTCTTCCTGTGGAGTTAACACGGAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000513771.1 ENST00000658296.1 |
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| CDS CAA 72 bp | GCCCCTTCCCAAGCGAGTCCAAGAAAGGCGCAAATCTaGAGGCCCAGGGGCAGGACACAGAGGTTGGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: APSQASPRKAQI*RPRGRTQRLVE Trigger: CTCTACCAACCTCTGTGTCCTGCCCCTGGGCCTCAAGATTTGCGCCTTTCTTGGACTCGCTTGGGAAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS TCA 72 bp | CTATGTCCTGTGTCCTCTGGTCTCCTGGAATCCGAATaGGCGCCTCCCTGCTCGATCCACTCGAGTAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LCPVSSGLLESE*APPCSIHSSSR Trigger: CCTGCTACTCGAGTGGATCGAGCAGGGAGGCGCTCATTCGGATTCCAGGAGACCAGAGGACACAGGACATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS TCA 72 bp | TCTGGTTCACCGGACAGGGATTCCGTTTTCGAACCTTaGGCTACCCTGGAGTGGTCCCGGTATAAGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: SGSPDRDSVFEP*ATLEWSRYKPR Trigger: CCGCGGCTTATACCGGGACCACTCCAGGGTAGCTCAAGGTTCGAAAACGGAATCCCTGTCCGGTGAACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CCA 72 bp | GTAAACGCTCCCTATGTCCTGTGTCCTCTGGTCTCCTaGAATCCGAATGAGCGCCTCCCTGCTCGATCCACT | + |
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Preference number: 6 (lower is better) Translates to: VNAPYVLCPLVS*NPNERLPARST Trigger: AGTGGATCGAGCAGGGAGGCGCTCATTCGGATTCCAGGAGACCAGAGGACACAGGACATAGGGAGCGTTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS TCA 72 bp | GCGAATGTGACAGGTAGAGCCGTTACTCCCGGGTCATaGATGTGGCCGTCTGCGCTTTTCCGTGTTAACTCC | + |
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Preference number: 6 (lower is better) Translates to: ANVTGRAVTPGS*MWPSALFRVNS Trigger: GGAGTTAACACGGAAAAGCGCAGACGGCCACATTCATGACCCGGGAGTAACGGCTCTACCTGTCACATTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000513771.1 ENST00000658296.1 |
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| CDS TCA 72 bp | TCTGCTAGCAGCTACTCTCCGGGTACGTTCGACAAGTaGTCCCTAGCTGTAAAAGGAGAGCCCCCACAACCC | + |
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Preference number: 6 (lower is better) Translates to: SASSYSPGTFDK*SLAVKGEPPQP Trigger: GGGTTGTGGGGGCTCTCCTTTTACAGCTAGGGATCACTTGTCGAACGTACCCGGAGAGTAGCTGCTAGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655600.1 ENST00000658296.1 |
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| CDS TCA 72 bp | TGCTCTGGAGTGCATTCCCCAAAGAGGGTGGCTTTATaGCTGGCCTTCCTAAAGCAGATCCTGAGGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CSGVHSPKRVAL*LAFLKQILRPG Trigger: CCCAGGCCTCAGGATCTGCTTTAGGAAGGCCAGTCATAAAGCCACCCTCTTTGGGGAATGCACTCCAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS CAA 72 bp | GTCTGTGAGTCAAGTCCCATTGGCACACATGTCCCATaGGCACACGGCGCCTCCCTCTCATTATGTGTCACC | + |
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Preference number: 6 (lower is better) Translates to: VCESSPIGTHVP*AHGASLSLCVT Trigger: GGTGACACATAATGAGAGGGAGGCGCCGTGTGCCAATGGGACATGTGTGCCAATGGGACTTGACTCACAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS GCA 72 bp | GAGAGCCCCCACAACCCTCAAGAGCATACTCTCACGTaGAGGTCTGTGCCCAAAGTCTTCACAGCAACTGTT | + |
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Preference number: 6 (lower is better) Translates to: ESPHNPQEHTLT*RSVPKVFTATV Trigger: AACAGTTGCTGTGAAGACTTTGGGCACAGACCTGCACGTGAGAGTATGCTCTTGAGGGTTGTGGGGGCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655600.1 ENST00000658296.1 |
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| CDS CCA 72 bp | ACACGGCGCCTCCCTCTCATTATGTGTCACCTTTACTaGCTTTGGCACCAAAAGGGCAGACGTGGGTACTTC | + |
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Preference number: 6 (lower is better) Translates to: TRRLPLIMCHLY*LWHQKGRRGYF Trigger: GAAGTACCCACGTCTGCCCTTTTGGTGCCAAAGCCAGTAAAGGTGACACATAATGAGAGGGAGGCGCCGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CCA 72 bp | TCTGTGAGTCAAGTCCCATTGGCACACATGTCCCATTaGCACACGGCGCCTCCCTCTCATTATGTGTCACCT | + |
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Preference number: 6 (lower is better) Translates to: SVSQVPLAHMSH*HTAPPSHYVSP Trigger: AGGTGACACATAATGAGAGGGAGGCGCCGTGTGCCAATGGGACATGTGTGCCAATGGGACTTGACTCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CAA 72 bp | GCGCCTCCCTCTCATTATGTGTCACCTTTACTGGCTTaGGCACCAAAAGGGCAGACGTGGGTACTTCCGACA | + |
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Preference number: 6 (lower is better) Translates to: APPSHYVSPLLA*APKGQTWVLPT Trigger: TGTCGGAAGTACCCACGTCTGCCCTTTTGGTGCCAAAGCCAGTAAAGGTGACACATAATGAGAGGGAGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS TCA 72 bp | CTGTGCCGAGCTTGTCCACAGCAAGTAAAACTGGATTaGGTTCACAGGTGCGGGTGGTTGGGAATGGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LCRACPQQVKLD*VHRCGWLGMES Trigger: GCTTTCCATTCCCAACCACCCGCACCTGTGAACTCAATCCAGTTTTACTTGCTGTGGACAAGCTCGGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS CCA 72 bp | CGCCTCCCTCTCATTATGTGTCACCTTTACTGGCTTTaGCACCAAAAGGGCAGACGTGGGTACTTCCGACAA | + |
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Preference number: 6 (lower is better) Translates to: RLPLIMCHLYWL*HQKGRRGYFRQ Trigger: TTGTCGGAAGTACCCACGTCTGCCCTTTTGGTGCCAAAGCCAGTAAAGGTGACACATAATGAGAGGGAGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CAA 72 bp | CACGATTCTTTCCAATCCCCAGCACTCCCGGAAATCTaGGTGATGCCTCCGCTGGACATCTTTCGGGATCAA | + |
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Preference number: 6 (lower is better) Translates to: HDSFQSPALPEI*VMPPLDIFRDQ Trigger: TTGATCCCGAAAGATGTCCAGCGGAGGCATCACCAAGATTTCCGGGAGTGCTGGGGATTGGAAAGAATCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655600.1 ENST00000658296.1 |
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| CDS CAA 72 bp | CTACGGAAACCCACACCTACCTCTGTCGCCATAATATaGTCTGCTAGCAGCTACTCTCCGGGTACGTTCGAC | + |
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Preference number: 6 (lower is better) Translates to: LRKPTPTSVAII*SASSYSPGTFD Trigger: GTCGAACGTACCCGGAGAGTAGCTGCTAGCAGACAATATTATGGCGACAGAGGTAGGTGTGGGTTTCCGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS CAA 72 bp | GAAATTCAAATGTTGGTGTCTGTGAGTCAAGTCCCATaGGCACACATGTCCCATTGGCACACGGCGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: EIQMLVSVSQVP*AHMSHWHTAPP Trigger: GGGAGGCGCCGTGTGCCAATGGGACATGTGTGCCAATGGGACTTGACTCACAGACACCAACATTTGAATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CAA 90 bp | TCTCCTATCCACGATTCTTTCCAATCCCCAGCACTCCCGGAAATCTaGGTGATGCCTCCGCTGGACATCTTTCGGGATCAAAACCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SPIHDSFQSPALPEI*VMPPLDIFRDQNLG Trigger: TCCCAGGTTTTGATCCCGAAAGATGTCCAGCGGAGGCATCACCAAGATTTCCGGGAGTGCTGGGGATTGGAAAGAATCGTGGATAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CAA 90 bp | TGGCACACGGCGCCTCCCTCTCATTATGTGTCACCTTTACTGGCTTaGGCACCAAAAGGGCAGACGTGGGTACTTCCGACAAAACTGAAA | + |
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Preference number: 6 (lower is better) Translates to: WHTAPPSHYVSPLLA*APKGQTWVLPTKLK Trigger: TTTCAGTTTTGTCGGAAGTACCCACGTCTGCCCTTTTGGTGCCAAAGCCAGTAAAGGTGACACATAATGAGAGGGAGGCGCCGTGTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CAA 90 bp | AATGTTGGTGTCTGTGAGTCAAGTCCCATTGGCACACATGTCCCATaGGCACACGGCGCCTCCCTCTCATTATGTGTCACCTTTACTGGC | + |
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Preference number: 6 (lower is better) Translates to: NVGVCESSPIGTHVP*AHGASLSLCVTFTG Trigger: GCCAGTAAAGGTGACACATAATGAGAGGGAGGCGCCGTGTGCCAATGGGACATGTGTGCCAATGGGACTTGACTCACAGACACCAACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CAA 90 bp | TCTCCTATCCACGATTCTTTCCAATCCCCAGCACTCCCGGAAATCTaGGTGATGCCTCCGCTGGACATCTTTCGGGATCAAAACCCTAGA | + |
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Preference number: 6 (lower is better) Translates to: SPIHDSFQSPALPEI*VMPPLDIFRDQNPR Trigger: TCTAGGGTTTTGATCCCGAAAGATGTCCAGCGGAGGCATCACCAAGATTTCCGGGAGTGCTGGGGATTGGAAAGAATCGTGGATAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS CAA 90 bp | TGGATGAGCTCTGTGCCGAGCTTGTCCACAGCAAGTAAAACTGGATaGAGTTCACAGGTGCGGGTGGTTGGGAATGGAAAGCAAAAGCGT | + |
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Preference number: 6 (lower is better) Translates to: WMSSVPSLSTASKTG*SSQVRVVGNGKQKR Trigger: ACGCTTTTGCTTTCCATTCCCAACCACCCGCACCTGTGAACTCAATCCAGTTTTACTTGCTGTGGACAAGCTCGGCACAGAGCTCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS TCA 72 bp | CGATTCACCGAAAAGGCGGATTTCCGTCTGGCAGCTTaGACCCATTCTCAAGGTCTTATAGTCTCCCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: RFTEKADFRLAA*THSQGLIVSQA Trigger: GGCTTGGGAGACTATAAGACCTTGAGAATGGGTTCAAGCTGCCAGACGGAAATCCGCCTTTTCGGTGAATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS TCA 72 bp | ATTCTTTCCAATCCCCAGCACTCCCGGAAATCTTGGTaGTGCCTCCGCTGGACATCTTTCGGGATCAAAACC | + |
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Preference number: 6 (lower is better) Translates to: ILSNPQHSRKSW*CLRWTSFGIKT Trigger: GGTTTTGATCCCGAAAGATGTCCAGCGGAGGCATCACCAAGATTTCCGGGAGTGCTGGGGATTGGAAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655600.1 ENST00000658296.1 |
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| CDS GCA 72 bp | TCTCACAGTTTCGCAGGCTGGAAGTCTAGATCAGGGTaGAGCACACTGCAGTTCTTGGTAAGGATCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SHSFAGWKSRSG*STLQFLVRILF Trigger: GAAGAGGATCCTTACCAAGAACTGCAGTGTGCTGCACCCTGATCTAGACTTCCAGCCTGCGAAACTGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CAA 72 bp | GGAATGGAAAGCAAAAGCGTAGATGCCCTCTTCTCTTaGTGCCGCTGTGACCACCAGGTGGACATACTAGTG | + |
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Preference number: 6 (lower is better) Translates to: GMESKSVDALFS*CRCDHQVDILV Trigger: CACTAGTATGTCCACCTGGTGGTCACAGCGGCACAAAGAGAAGAGGGCATCTACGCTTTTGCTTTCCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS CAA 72 bp | TCTGTGCCGAGCTTGTCCACAGCAAGTAAAACTGGATaGAGTTCACAGGTGCGGGTGGTTGGGAATGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: SVPSLSTASKTG*SSQVRVVGNGK Trigger: CTTTCCATTCCCAACCACCCGCACCTGTGAACTCAATCCAGTTTTACTTGCTGTGGACAAGCTCGGCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS CAA 72 bp | AACCTTTGTCCCCTTAGCACCTCTGTCGCCATAATATaGTCTGCTAGCAGCTACTCTCCGGGTACGTTCGAC | + |
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Preference number: 6 (lower is better) Translates to: NLCPLSTSVAII*SASSYSPGTFD Trigger: GTCGAACGTACCCGGAGAGTAGCTGCTAGCAGACAATATTATGGCGACAGAGGTGCTAAGGGGACAAAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CAA 90 bp | CTTCATGGCTCGATTCACCGAAAAGGCGGATTTCCGTCTGGCAGCTaGAACCCATTCTCAAGGTCTTATAGTCTCCCAAGCCCAACTTGT | + |
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Preference number: 6 (lower is better) Translates to: LHGSIHRKGGFPSGS*NPFSRSYSLPSPTC Trigger: ACAAGTTGGGCTTGGGAGACTATAAGACCTTGAGAATGGGTTCAAGCTGCCAGACGGAAATCCGCCTTTTCGGTGAATCGAGCCATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS TCA 72 bp | CACCAAAAGGGCAGACGTGGGTACTTCCGACAAAACTaGAAAGATTCTGTACGTGGCCCTTGCAGAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: HQKGRRGYFRQN*KDSVRGPCRES Trigger: GCTTTCTCTGCAAGGGCCACGTACAGAATCTTTTCAGTTTTGTCGGAAGTACCCACGTCTGCCCTTTTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CCA 72 bp | CAAACAATGACATTGATTTCTCACAGTTTCGCAGGCTaGAAGTCTAGATCAGGGTGCAGCACACTGCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: QTMTLISHSFAG*KSRSGCSTLQF Trigger: GAACTGCAGTGTGCTGCACCCTGATCTAGACTTCCAGCCTGCGAAACTGTGAGAAATCAATGTCATTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS TCA 72 bp | GGTGAGGAGCCCCCAGAAGCCGCTCTTACCGTTTTATaGAAAGATAATAAACAGTGCATACCCATTTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: GEEPPEAALTVL*KDNKQCIPICK Trigger: TTTGCAAATGGGTATGCACTGTTTATTATCTTTTCATAAAACGGTAAGAGCGGCTTCTGGGGGCTCCTCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655600.1 |
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| CDS GCA 72 bp | GTTCGGGTTGCTGTAACACAATACCATATGCCAGGCTaGTCAAACAATGACATTGATTTCTCACAGTTTCGC | + |
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Preference number: 6 (lower is better) Translates to: VRVAVTQYHMPG*SNNDIDFSQFR Trigger: GCGAAACTGTGAGAAATCAATGTCATTGTTTGAGCAGCCTGGCATATGGTATTGTGTTACAGCAACCCGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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| CDS CAA 72 bp | CACAATACCATATGCCAGGCTGCTCAAACAATGACATaGATTTCTCACAGTTTCGCAGGCTGGAAGTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: HNTICQAAQTMT*ISHSFAGWKSR Trigger: TCTAGACTTCCAGCCTGCGAAACTGTGAGAAATCAATGTCATTGTTTGAGCAGCCTGGCATATGGTATTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658296.1 |
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