Pregenerated sensors for LINC01960 (Homo sapiens)
Ensembl gene IDs: ENSG00000260868Ensembl transcript IDs: ENST00000563759.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCTGGCTGCGGAGGCGACAGGCTGAGCCCGCGCTTGGAGGCCGCTaGGCTCTGGGGCCTCGCCTTCCGGAGCCTGGCCGGCGTTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: PWLRRRQAEPALGGR*ALGPRLPEPGRRSR Trigger: CCGGGAACGCCGGCCAGGCTCCGGAAGGCGAGGCCCCAGAGCGCAGCGGCCTCCAAGCGCGGGCTCAGCCTGTCGCCTCCGCAGCCAGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS TCA 90 bp | CCCGGAAGAGCGGCCTCCTGGGCCCTGGCTGCGGAGGCGACAGGCTaGGCCCGCGCTTGGAGGCCGCTGCGCTCTGGGGCCTCGCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: PGRAASWALAAEATG*ARAWRPLRSGASPS Trigger: GGAAGGCGAGGCCCCAGAGCGCAGCGGCCTCCAAGCGCGGGCTCAGCCTGTCGCCTCCGCAGCCAGGGCCCAGGAGGCCGCTCTTCCGGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 90 bp | GAACGAGCCGTGTTGGTGACCCCGGAAGAGCGGCCTCCTGGGCCCTaGCTGCGGAGGCGACAGGCTGAGCCCGCGCTTGGAGGCCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: ERAVLVTPEERPPGP*LRRRQAEPALGGRC Trigger: GCAGCGGCCTCCAAGCGCGGGCTCAGCCTGTCGCCTCCGCAGCCAGGGCCCAGGAGGCCGCTCTTCCGGGGTCACCAACACGGCTCGTTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 90 bp | CGCGCTTGGAGGCCGCTGCGCTCTGGGGCCTCGCCTTCCGGAGCCTaGCCGGCGTTCCCGGTTGCATCTGCGTGGAAACTTGTCCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: RAWRPLRSGASPSGA*PAFPVASAWKLVPE Trigger: CTCGGGGACAAGTTTCCACGCAGATGCAACCGGGAACGCCGGCCAGGCTCCGGAAGGCGAGGCCCCAGAGCGCAGCGGCCTCCAAGCGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 90 bp | GCCCACAGGACAGAGGGAGCGAGAAGGAACGCACTCCGCACGCGCTaGGCCCAGGCAAACGGGCTCCATGGAAGAAGCACAGCCTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: AHRTEGARRNALRTR*AQANGLHGRSTALC Trigger: GCACAAGGCTGTGCTTCTTCCATGGAGCCCGTTTGCCTGGGCCCAGCGCGTGCGGAGTGCGTTCCTTCTCGCTCCCTCTGTCCTGTGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 90 bp | GGCAAACGGGCTCCATGGAAGAAGCACAGCCTTGTGCTGAGGAGTTaGGCGTCGCCCTCACCAGGGTCCTCTGGTGAGCCTCTCCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: GKRAPWKKHSLVLRS*ASPSPGSSGEPLPL Trigger: CAAGGGGAGAGGCTCACCAGAGGACCCTGGTGAGGGCGACGCCCAACTCCTCAGCACAAGGCTGTGCTTCTTCCATGGAGCCCGTTTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 90 bp | CCTGAGCTGTGTCCCCTACACCGTATTCCGGCTCACACTGTGCCCTaGGCCTCTAGGCTCAGAACGAGCCGTGTTGGTGACCCCGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: PELCPLHRIPAHTVP*ASRLRTSRVGDPGR Trigger: TCTTCCGGGGTCACCAACACGGCTCGTTCTGAGCCTAGAGGCCCAGGGCACAGTGTGAGCCGGAATACGGTGTAGGGGACACAGCTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS TCA 90 bp | CCTTGTGCTGAGGAGTTGGGCGTCGCCCTCACCAGGGTCCTCTGGTaGGCCTCTCCCCTTGACGGTCTCCTTTTGTTTGTGCAGTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: PCAEELGVALTRVLW*ASPLDGLLLFVQWE Trigger: TTCCCACTGCACAAACAAAAGGAGACCGTCAAGGGGAGAGGCTCACCAGAGGACCCTGGTGAGGGCGACGCCCAACTCCTCAGCACAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS TCA 90 bp | CAAAGAACAGCATTTCTTCTGCGACAGGAGGGAGTGCCTGGGGCCTaGGCTGTGTCCCCTACACCGTATTCCGGCTCACACTGTGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: QRTAFLLRQEGVPGA*AVSPTPYSGSHCAL Trigger: CAGGGCACAGTGTGAGCCGGAATACGGTGTAGGGGACACAGCTCAGGCCCCAGGCACTCCCTCCTGTCGCAGAAGAAATGCTGTTCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS TCA 90 bp | GTTGGGCGTCGCCCTCACCAGGGTCCTCTGGTGAGCCTCTCCCCTTaGCGGTCTCCTTTTGTTTGTGCAGTGGGAAGGATGCCTATCTCT | + |
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Preference number: 5 (lower is better) Translates to: VGRRPHQGPLVSLSP*RSPFVCAVGRMPIS Trigger: AGAGATAGGCATCCTTCCCACTGCACAAACAAAAGGAGACCGTCAAGGGGAGAGGCTCACCAGAGGACCCTGGTGAGGGCGACGCCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 90 bp | GGGTCCTCTGGTGAGCCTCTCCCCTTGACGGTCTCCTTTTGTTTGTaGAGTGGGAAGGATGCCTATCTCTGCCCAGAGAACGTTGCAGTC | + |
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Preference number: 5 (lower is better) Translates to: GSSGEPLPLTVSFCL*SGKDAYLCPENVAV Trigger: GACTGCAACGTTCTCTGGGCAGAGATAGGCATCCTTCCCACTGCACAAACAAAAGGAGACCGTCAAGGGGAGAGGCTCACCAGAGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 90 bp | GCCTCTCCCCTTGACGGTCTCCTTTTGTTTGTGCAGTGGGAAGGATaGCTATCTCTGCCCAGAGAACGTTGCAGTCAGAGGCCCACTTTG | + |
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Preference number: 5 (lower is better) Translates to: ASPLDGLLLFVQWEG*LSLPRERCSQRPTL Trigger: CAAAGTGGGCCTCTGACTGCAACGTTCTCTGGGCAGAGATAGGCATCCTTCCCACTGCACAAACAAAAGGAGACCGTCAAGGGGAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 90 bp | TTTGGGGAGACATTCATCTTCCTTGACGGCCCAGTCAGTGCTCTTTaGGGTTTTGCCCTCTCTTACTGGCTTTGGTGGCGGCGGTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: FGETFIFLDGPVSAL*GFALSYWLWWRRCR Trigger: TCTGCACCGCCGCCACCAAAGCCAGTAAGAGAGGGCAAAACCCCAAAGAGCACTGACTGGGCCGTCAAGGAAGATGAATGTCTCCCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 90 bp | CCGCTCTGTGGGCCAGGATTGCATAGGGGCTGTTTCCTGAGGTTGTaGAATAGGCCAGCTCCTGGGGTAAGGAACAAGAACAGTGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: PLCGPGLHRGCFLRL*NRPAPGVRNKNSAN Trigger: ATTTGCACTGTTCTTGTTCCTTACCCCAGGAGCTGGCCTATTGCACAACCTCAGGAAACAGCCCCTATGCAATCCTGGCCCACAGAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 90 bp | GAAACATTGATCAAAGAACAGCATTTCTTCTGCGACAGGAGGGAGTaGCTGGGGCCTGAGCTGTGTCCCCTACACCGTATTCCGGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: ETLIKEQHFFCDRRE*LGPELCPLHRIPAH Trigger: GTGAGCCGGAATACGGTGTAGGGGACACAGCTCAGGCCCCAGGCACTCCCTCCTGTCGCAGAAGAAATGCTGTTCTTTGATCAATGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 90 bp | TTGACGGTCTCCTTTTGTTTGTGCAGTGGGAAGGATGCCTATCTCTaGCCAGAGAACGTTGCAGTCAGAGGCCCACTTTGCCCTGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LTVSFCLCSGKDAYL*PENVAVRGPLCPGK Trigger: CTTCCCAGGGCAAAGTGGGCCTCTGACTGCAACGTTCTCTGGGCAGAGATAGGCATCCTTCCCACTGCACAAACAAAAGGAGACCGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 90 bp | ACCAGCACCCCGTGCTCCCTCCGAGAGTTCAGCCACGTGCTCGGCTaGTTTCCCCACATTAGAAACATTGATCAAAGAACAGCATTTCTT | + |
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Preference number: 5 (lower is better) Translates to: TSTPCSLREFSHVLG*FPHIRNIDQRTAFL Trigger: AAGAAATGCTGTTCTTTGATCAATGTTTCTAATGTGGGGAAACCAGCCGAGCACGTGGCTGAACTCTCGGAGGGAGCACGGGGTGCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 90 bp | CCCCTCTCTAGCAGTCCAGGCAGCCAGAGCAGAGTGACTAAGGTCTaGAGGAATGAGCCTTGCCATGGAAAAACCAGAAACTCACAGATT | + |
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Preference number: 5 (lower is better) Translates to: PLSSSPGSQSRVTKV*RNEPCHGKTRNSQI Trigger: AATCTGTGAGTTTCTGGTTTTTCCATGGCAAGGCTCATTCCTCCAGACCTTAGTCACTCTGCTCTGGCTGCCTGGACTGCTAGAGAGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 90 bp | GATAACATGACGCACGGGAAAATGTATGATGTAGTTTCTGTCCTCTaGCCCCCGACGAGAATAAAGCTTCCACCAGGCTGGAGGGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: DNMTHGKMYDVVSVL*PPTRIKLPPGWRER Trigger: TCTCTCCCTCCAGCCTGGTGGAAGCTTTATTCTCGTCGGGGGCCAGAGGACAGAAACTACATCATACATTTTCCCGTGCGTCATGTTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS TCA 90 bp | AATCTTCCTGATTATCCCCAAATCTCCTCTTCCAGTTGGTTTGTTTaGATCAGGATCCAAACACGGCCCACACATTGCATTTGGTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: NLPDYPQISSSSWFV*IRIQTRPTHCIWLL Trigger: TAACAACCAAATGCAATGTGTGGGCCGTGTTTGGATCCTGATTCAAACAAACCAACTGGAAGAGGAGATTTGGGGATAATCAGGAAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS TCA 72 bp | GCGGCCTCCTGGGCCCTGGCTGCGGAGGCGACAGGCTaGGCCCGCGCTTGGAGGCCGCTGCGCTCTGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: AASWALAAEATG*ARAWRPLRSGA Trigger: GGCCCCAGAGCGCAGCGGCCTCCAAGCGCGGGCTCAGCCTGTCGCCTCCGCAGCCAGGGCCCAGGAGGCCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 90 bp | GGCCTCCTGGGCCCTGGCTGCGGAGGCGACAGGCTGAGCCCGCGCTaGGAGGCCGCTGCGCTCTGGGGCCTCGCCTTCCGGAGCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: GLLGPGCGGDRLSPR*EAAALWGLAFRSLA Trigger: GGCCAGGCTCCGGAAGGCGAGGCCCCAGAGCGCAGCGGCCTCCAAGCGCGGGCTCAGCCTGTCGCCTCCGCAGCCAGGGCCCAGGAGGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 72 bp | CGGAGGCGACAGGCTGAGCCCGCGCTTGGAGGCCGCTaGGCTCTGGGGCCTCGCCTTCCGGAGCCTGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: RRRQAEPALGGR*ALGPRLPEPGR Trigger: CCGGCCAGGCTCCGGAAGGCGAGGCCCCAGAGCGCAGCGGCCTCCAAGCGCGGGCTCAGCCTGTCGCCTCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 72 bp | GGCCCTGGCTGCGGAGGCGACAGGCTGAGCCCGCGCTaGGAGGCCGCTGCGCTCTGGGGCCTCGCCTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: GPGCGGDRLSPR*EAAALWGLAFR Trigger: CCGGAAGGCGAGGCCCCAGAGCGCAGCGGCCTCCAAGCGCGGGCTCAGCCTGTCGCCTCCGCAGCCAGGGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 72 bp | GTGTTGGTGACCCCGGAAGAGCGGCCTCCTGGGCCCTaGCTGCGGAGGCGACAGGCTGAGCCCGCGCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: VLVTPEERPPGP*LRRRQAEPALG Trigger: TCCAAGCGCGGGCTCAGCCTGTCGCCTCCGCAGCCAGGGCCCAGGAGGCCGCTCTTCCGGGGTCACCAACAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 72 bp | CTGTGCCCTGGGCCTCTAGGCTCAGAACGAGCCGTGTaGGTGACCCCGGAAGAGCGGCCTCCTGGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LCPGPLGSERAV*VTPEERPPGPW Trigger: CCAGGGCCCAGGAGGCCGCTCTTCCGGGGTCACCAACACGGCTCGTTCTGAGCCTAGAGGCCCAGGGCACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 72 bp | CTCTGTGCATCAGAGCGGGGGCTCACCAGCACCCCGTaGTCCCTCCGAGAGTTCAGCCACGTGCTCGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LCASERGLTSTP*SLREFSHVLGW Trigger: CCAGCCGAGCACGTGGCTGAACTCTCGGAGGGAGCACGGGGTGCTGGTGAGCCCCCGCTCTGATGCACAGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 72 bp | GCCTTCCGGAGCCTGGCCGGCGTTCCCGGTTGCATCTaGGTGGAAACTTGTCCCCGAGGAGCACTTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: AFRSLAGVPGCI*VETCPRGALLG Trigger: CCCCAAAAGTGCTCCTCGGGGACAAGTTTCCACGCAGATGCAACCGGGAACGCCGGCCAGGCTCCGGAAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 72 bp | ACTCCGCACGCGCTGGGCCCAGGCAAACGGGCTCCATaGAAGAAGCACAGCCTTGTGCTGAGGAGTTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: TPHALGPGKRAP*KKHSLVLRSWA Trigger: CGCCCAACTCCTCAGCACAAGGCTGTGCTTCTTCCATGGAGCCCGTTTGCCTGGGCCCAGCGCGTGCGGAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 90 bp | GGATGCCTATCTCTGCCCAGAGAACGTTGCAGTCAGAGGCCCACTTaGCCCTGGGAAGGCCCCTTCATGAGAGCTAGGCCCTGGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: GCLSLPRERCSQRPT*PWEGPFMRARPWLP Trigger: GGGCAGCCAGGGCCTAGCTCTCATGAAGGGGCCTTCCCAGGGCAAAGTGGGCCTCTGACTGCAACGTTCTCTGGGCAGAGATAGGCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS TCA 72 bp | GCAAACGGGCTCCATGGAAGAAGCACAGCCTTGTGCTaGGGAGTTGGGCGTCGCCCTCACCAGGGTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ANGLHGRSTALC*GVGRRPHQGPL Trigger: CAGAGGACCCTGGTGAGGGCGACGCCCAACTCCTCAGCACAAGGCTGTGCTTCTTCCATGGAGCCCGTTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 72 bp | TTGCCCTGGGAAGGCCCCTTCATGAGAGCTAGGCCCTaGCTGCCCACAGGGTTGGTGGTGCATGGAAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LPWEGPFMRARP*LPTGLVVHGRK Trigger: CTTCCTTCCATGCACCACCAACCCTGTGGGCAGCCAGGGCCTAGCTCTCATGAAGGGGCCTTCCCAGGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 72 bp | CCCAGAGAACGTTGCAGTCAGAGGCCCACTTTGCCCTaGGAAGGCCCCTTCATGAGAGCTAGGCCCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PRERCSQRPTLP*EGPFMRARPWL Trigger: CAGCCAGGGCCTAGCTCTCATGAAGGGGCCTTCCCAGGGCAAAGTGGGCCTCTGACTGCAACGTTCTCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 72 bp | GCTCCATGGAAGAAGCACAGCCTTGTGCTGAGGAGTTaGGCGTCGCCCTCACCAGGGTCCTCTGGTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: APWKKHSLVLRS*ASPSPGSSGEP Trigger: AGGCTCACCAGAGGACCCTGGTGAGGGCGACGCCCAACTCCTCAGCACAAGGCTGTGCTTCTTCCATGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS TCA 72 bp | GCATTTCTTCTGCGACAGGAGGGAGTGCCTGGGGCCTaGGCTGTGTCCCCTACACCGTATTCCGGCTCACAC | + |
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Preference number: 6 (lower is better) Translates to: AFLLRQEGVPGA*AVSPTPYSGSH Trigger: GTGTGAGCCGGAATACGGTGTAGGGGACACAGCTCAGGCCCCAGGCACTCCCTCCTGTCGCAGAAGAAATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS TCA 72 bp | GAGGAGTTGGGCGTCGCCCTCACCAGGGTCCTCTGGTaGGCCTCTCCCCTTGACGGTCTCCTTTTGTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: EELGVALTRVLW*ASPLDGLLLFV Trigger: CACAAACAAAAGGAGACCGTCAAGGGGAGAGGCTCACCAGAGGACCCTGGTGAGGGCGACGCCCAACTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 72 bp | CCCCCGAAGAACACGTTGACCCTCTTAAGCGGGGAATaGAATGTGGGTCGCCTGCTGGAGGACGCCCTCGAT | + |
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Preference number: 6 (lower is better) Translates to: PPKNTLTLLSGE*NVGRLLEDALD Trigger: ATCGAGGGCGTCCTCCAGCAGGCGACCCACATTGCATTCCCCGCTTAAGAGGGTCAACGTGTTCTTCGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 72 bp | AGCTGTGTCCCCTACACCGTATTCCGGCTCACACTGTaGCCTGGGCCTCTAGGCTCAGAACGAGCCGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SCVPYTVFRLTL*PGPLGSERAVL Trigger: CAACACGGCTCGTTCTGAGCCTAGAGGCCCAGGGCACAGTGTGAGCCGGAATACGGTGTAGGGGACACAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 72 bp | CAGTGGGAAGGATGCCTATCTCTGCCCAGAGAACGTTaGAGTCAGAGGCCCACTTTGCCCTGGGAAGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: QWEGCLSLPRER*SQRPTLPWEGP Trigger: GGGGCCTTCCCAGGGCAAAGTGGGCCTCTGACTGCAACGTTCTCTGGGCAGAGATAGGCATCCTTCCCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 72 bp | TGTCCCCTACACCGTATTCCGGCTCACACTGTGCCCTaGGCCTCTAGGCTCAGAACGAGCCGTGTTGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: CPLHRIPAHTVP*ASRLRTSRVGD Trigger: GTCACCAACACGGCTCGTTCTGAGCCTAGAGGCCCAGGGCACAGTGTGAGCCGGAATACGGTGTAGGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 72 bp | TCTCTGCCCAGAGAACGTTGCAGTCAGAGGCCCACTTaGCCCTGGGAAGGCCCCTTCATGAGAGCTAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SLPRERCSQRPT*PWEGPFMRARP Trigger: GGGCCTAGCTCTCATGAAGGGGCCTTCCCAGGGCAAAGTGGGCCTCTGACTGCAACGTTCTCTGGGCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 90 bp | GCGGGGAATGCAATGTGGGTCGCCTGCTGGAGGACGCCCTCGATTTaGATGAGGCTTGTGCAGGCACCCGCGATAAGCTTCAGAACGCGA | + |
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Preference number: 6 (lower is better) Translates to: AGNAMWVACWRTPSI*MRLVQAPAISFRTR Trigger: TCGCGTTCTGAAGCTTATCGCGGGTGCCTGCACAAGCCTCATCAAAATCGAGGGCGTCCTCCAGCAGGCGACCCACATTGCATTCCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS TCA 72 bp | CGCCCTCACCAGGGTCCTCTGGTGAGCCTCTCCCCTTaGCGGTCTCCTTTTGTTTGTGCAGTGGGAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: RPHQGPLVSLSP*RSPFVCAVGRM Trigger: CATCCTTCCCACTGCACAAACAAAAGGAGACCGTCAAGGGGAGAGGCTCACCAGAGGACCCTGGTGAGGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 72 bp | GCAATGTGGGTCGCCTGCTGGAGGACGCCCTCGATTTaGATGAGGCTTGTGCAGGCACCCGCGATAAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: AMWVACWRTPSI*MRLVQAPAISF Trigger: GAAGCTTATCGCGGGTGCCTGCACAAGCCTCATCAAAATCGAGGGCGTCCTCCAGCAGGCGACCCACATTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 90 bp | AGTTGGGCGTCGCCCTCACCAGGGTCCTCTGGTGAGCCTCTCCCCTaGACGGTCTCCTTTTGTTTGTGCAGTGGGAAGGATGCCTATCTC | + |
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Preference number: 6 (lower is better) Translates to: SWASPSPGSSGEPLP*TVSFCLCSGKDAYL Trigger: GAGATAGGCATCCTTCCCACTGCACAAACAAAAGGAGACCGTCAAGGGGAGAGGCTCACCAGAGGACCCTGGTGAGGGCGACGCCCAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 72 bp | CCAGCACCCCGTGCTCCCTCCGAGAGTTCAGCCACGTaGTCGGCTGGTTTCCCCACATTAGAAACATTGATC | + |
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Preference number: 6 (lower is better) Translates to: PAPRAPSESSAT*SAGFPTLETLI Trigger: GATCAATGTTTCTAATGTGGGGAAACCAGCCGAGCACGTGGCTGAACTCTCGGAGGGAGCACGGGGTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 72 bp | AAGAACAGCATTTCTTCTGCGACAGGAGGGAGTGCCTaGGGCCTGAGCTGTGTCCCCTACACCGTATTCCGG | + |
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Preference number: 6 (lower is better) Translates to: KNSISSATGGSA*GLSCVPYTVFR Trigger: CCGGAATACGGTGTAGGGGACACAGCTCAGGCCCCAGGCACTCCCTCCTGTCGCAGAAGAAATGCTGTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 72 bp | TCTTCCTTGACGGCCCAGTCAGTGCTCTTTGGGGTTTaGCCCTCTCTTACTGGCTTTGGTGGCGGCGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: SSLTAQSVLFGV*PSLTGFGGGGA Trigger: TGCACCGCCGCCACCAAAGCCAGTAAGAGAGGGCAAAACCCCAAAGAGCACTGACTGGGCCGTCAAGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 72 bp | TCGCCCTCACCAGGGTCCTCTGGTGAGCCTCTCCCCTaGACGGTCTCCTTTTGTTTGTGCAGTGGGAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SPSPGSSGEPLP*TVSFCLCSGKD Trigger: ATCCTTCCCACTGCACAAACAAAAGGAGACCGTCAAGGGGAGAGGCTCACCAGAGGACCCTGGTGAGGGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 90 bp | AGACATTCATCTTCCTTGACGGCCCAGTCAGTGCTCTTTGGGGTTTaGCCCTCTCTTACTGGCTTTGGTGGCGGCGGTGCAGAGAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: RHSSSLTAQSVLFGV*PSLTGFGGGGAERG Trigger: GCCTCTCTCTGCACCGCCGCCACCAAAGCCAGTAAGAGAGGGCAAAACCCCAAAGAGCACTGACTGGGCCGTCAAGGAAGATGAATGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 90 bp | CCAGGGTCCTCTGGTGAGCCTCTCCCCTTGACGGTCTCCTTTTGTTaGTGCAGTGGGAAGGATGCCTATCTCTGCCCAGAGAACGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: PGSSGEPLPLTVSFC*CSGKDAYLCPENVA Trigger: TGCAACGTTCTCTGGGCAGAGATAGGCATCCTTCCCACTGCACAAACAAAAGGAGACCGTCAAGGGGAGAGGCTCACCAGAGGACCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 72 bp | CTCCACAGGCGCACGCGGCCCCGGCAGCTGGCAATCTaGCCTGCATCTGATCAATTTTATCTGCAAAGCATT | + |
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Preference number: 6 (lower is better) Translates to: LHRRTRPRQLAI*PASDQFYLQSI Trigger: AATGCTTTGCAGATAAAATTGATCAGATGCAGGCCAGATTGCCAGCTGCCGGGGCCGCGTGCGCCTGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 72 bp | GGGCCAGGATTGCATAGGGGCTGTTTCCTGAGGTTGTaGAATAGGCCAGCTCCTGGGGTAAGGAACAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: GPGLHRGCFLRL*NRPAPGVRNKN Trigger: GTTCTTGTTCCTTACCCCAGGAGCTGGCCTATTGCACAACCTCAGGAAACAGCCCCTATGCAATCCTGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 72 bp | GGTGAGCCTCTCCCCTTGACGGTCTCCTTTTGTTTGTaGAGTGGGAAGGATGCCTATCTCTGCCCAGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: GEPLPLTVSFCL*SGKDAYLCPEN Trigger: GTTCTCTGGGCAGAGATAGGCATCCTTCCCACTGCACAAACAAAAGGAGACCGTCAAGGGGAGAGGCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 72 bp | GCCTCTCCCCTTGACGGTCTCCTTTTGTTTGTGCAGTaGGAAGGATGCCTATCTCTGCCCAGAGAACGTTGC | + |
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Preference number: 6 (lower is better) Translates to: ASPLDGLLLFVQ*EGCLSLPRERC Trigger: GCAACGTTCTCTGGGCAGAGATAGGCATCCTTCCCACTGCACAAACAAAAGGAGACCGTCAAGGGGAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 72 bp | TGTGGGCCAGGATTGCATAGGGGCTGTTTCCTGAGGTaGTGCAATAGGCCAGCTCCTGGGGTAAGGAACAAG | + |
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Preference number: 6 (lower is better) Translates to: CGPGLHRGCFLR*CNRPAPGVRNK Trigger: CTTGTTCCTTACCCCAGGAGCTGGCCTATTGCACAACCTCAGGAAACAGCCCCTATGCAATCCTGGCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 72 bp | TCTGGTGAGCCTCTCCCCTTGACGGTCTCCTTTTGTTaGTGCAGTGGGAAGGATGCCTATCTCTGCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SGEPLPLTVSFC*CSGKDAYLCPE Trigger: CTCTGGGCAGAGATAGGCATCCTTCCCACTGCACAAACAAAAGGAGACCGTCAAGGGGAGAGGCTCACCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 90 bp | GTTCCCGGTTGCATCTGCGTGGAAACTTGTCCCCGAGGAGCACTTTaGGGGAGACATTCATCTTCCTTGACGGCCCAGTCAGTGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VPGCICVETCPRGAL*GRHSSSLTAQSVLF Trigger: AAAGAGCACTGACTGGGCCGTCAAGGAAGATGAATGTCTCCCCAAAAGTGCTCCTCGGGGACAAGTTTCCACGCAGATGCAACCGGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 72 bp | ATCAAAGAACAGCATTTCTTCTGCGACAGGAGGGAGTaGCTGGGGCCTGAGCTGTGTCCCCTACACCGTATT | + |
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Preference number: 6 (lower is better) Translates to: IKEQHFFCDRRE*LGPELCPLHRI Trigger: AATACGGTGTAGGGGACACAGCTCAGGCCCCAGGCACTCCCTCCTGTCGCAGAAGAAATGCTGTTCTTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS TCA 72 bp | CGTCCCCGGCCTTCCATTCGCGGTGTTTACCAATTGTaGAAGCAAATCCAGCTGTTGGGAGGAATTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RPRPSIRGVYQL*KQIQLLGGIAS Trigger: GGAAGCAATTCCTCCCAACAGCTGGATTTGCTTTCACAATTGGTAAACACCGCGAATGGAAGGCCGGGGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS GCA 72 bp | TCCTTTTGTTTGTGCAGTGGGAAGGATGCCTATCTCTaGCCAGAGAACGTTGCAGTCAGAGGCCCACTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SFCLCSGKDAYL*PENVAVRGPLC Trigger: GCAAAGTGGGCCTCTGACTGCAACGTTCTCTGGGCAGAGATAGGCATCCTTCCCACTGCACAAACAAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 72 bp | CCGTGCTCCCTCCGAGAGTTCAGCCACGTGCTCGGCTaGTTTCCCCACATTAGAAACATTGATCAAAGAACA | + |
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Preference number: 6 (lower is better) Translates to: PCSLREFSHVLG*FPHIRNIDQRT Trigger: TGTTCTTTGATCAATGTTTCTAATGTGGGGAAACCAGCCGAGCACGTGGCTGAACTCTCGGAGGGAGCACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 72 bp | ACGCACGGGAAAATGTATGATGTAGTTTCTGTCCTCTaGCCCCCGACGAGAATAAAGCTTCCACCAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: THGKMYDVVSVL*PPTRIKLPPGW Trigger: CCAGCCTGGTGGAAGCTTTATTCTCGTCGGGGGCCAGAGGACAGAAACTACATCATACATTTTCCCGTGCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CCA 72 bp | AGCAGTCCAGGCAGCCAGAGCAGAGTGACTAAGGTCTaGAGGAATGAGCCTTGCCATGGAAAAACCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: SSPGSQSRVTKV*RNEPCHGKTRN Trigger: GTTTCTGGTTTTTCCATGGCAAGGCTCATTCCTCCAGACCTTAGTCACTCTGCTCTGGCTGCCTGGACTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 72 bp | ATCAGGATCCAAACACGGCCCACACATTGCATTTGGTaGTTACGTGGCTTCGGTCTCTTTAAGCCAGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: IRIQTRPTHCIW*LRGFGLFKPEG Trigger: GCCCTCTGGCTTAAAGAGACCGAAGCCACGTAACAACCAAATGCAATGTGTGGGCCGTGTTTGGATCCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 72 bp | ATAAAAACCAGAACATGTCCGCTCTGTGGGCCAGGATaGCATAGGGGCTGTTTCCTGAGGTTGTGCAATAGG | + |
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Preference number: 6 (lower is better) Translates to: IKTRTCPLCGPG*HRGCFLRLCNR Trigger: CCTATTGCACAACCTCAGGAAACAGCCCCTATGCAATCCTGGCCCACAGAGCGGACATGTTCTGGTTTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS TCA 72 bp | GATTATCCCCAAATCTCCTCTTCCAGTTGGTTTGTTTaGATCAGGATCCAAACACGGCCCACACATTGCATT | + |
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Preference number: 6 (lower is better) Translates to: DYPQISSSSWFV*IRIQTRPTHCI Trigger: AATGCAATGTGTGGGCCGTGTTTGGATCCTGATTCAAACAAACCAACTGGAAGAGGAGATTTGGGGATAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 72 bp | TTCCTGATTATCCCCAAATCTCCTCTTCCAGTTGGTTaGTTTGAATCAGGATCCAAACACGGCCCACACATT | + |
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Preference number: 6 (lower is better) Translates to: FLIIPKSPLPVG*FESGSKHGPHI Trigger: AATGTGTGGGCCGTGTTTGGATCCTGATTCAAACAAACCAACTGGAAGAGGAGATTTGGGGATAATCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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| CDS CAA 90 bp | GCGGTGTTTACCAATTGTGAAAGCAAATCCAGCTGTTGGGAGGAATaGCTTCCAGATGACATGATGGGAAAGGAAAACACACTTCATAAA | + |
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Preference number: 6 (lower is better) Translates to: AVFTNCESKSSCWEE*LPDDMMGKENTLHK Trigger: TTTATGAAGTGTGTTTTCCTTTCCCATCATGTCATCTGGAAGCAATTCCTCCCAACAGCTGGATTTGCTTTCACAATTGGTAAACACCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563759.1 |
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