Pregenerated sensors for LINC01956 (Homo sapiens)
Ensembl gene IDs: ENSG00000258910Ensembl transcript IDs: ENST00000557729.2, ENST00000584273.1
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGAACGTCCGCTGCCAGGGCGCCGCCCGGGACCCCAGAGCATACCTaGTTCCCTTCCTGGTGGCCGGTCATCGCAGTCCCCAAGTCAACA | + |
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Preference number: 5 (lower is better) Translates to: GTSAARAPPGTPEHT*FPSWWPVIAVPKST Trigger: TGTTGACTTGGGGACTGCGATGACCGGCCACCAGGAAGGGAACCAGGTATGCTCTGGGGTCCCGGGCGGCGCCCTGGCAGCGGACGTTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CCA 90 bp | CCGAGCCTCTCCAAGGCCACCCTGCAGGCAGCAGCGACTTCTTCCTaGGGCAAAAGTCGCGCACTACCTGCGGGAACGTCCGCTGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PSLSKATLQAAATSS*GKSRALPAGTSAAR Trigger: CCTGGCAGCGGACGTTCCCGCAGGTAGTGCGCGACTTTTGCCCCAGGAAGAAGTCGCTGCTGCCTGCAGGGTGGCCTTGGAGAGGCTCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CCA 90 bp | GCTGAAGAGCCGTGGTCCCGGAGAAAAGGAAGTGAGCAGTCTCAATaGAGGCCCGAGCCTCTCCAAGGCCACCCTGCAGGCAGCAGCGAC | + |
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Preference number: 5 (lower is better) Translates to: AEEPWSRRKGSEQSQ*RPEPLQGHPAGSSD Trigger: GTCGCTGCTGCCTGCAGGGTGGCCTTGGAGAGGCTCGGGCCTCCATTGAGACTGCTCACTTCCTTTTCTCCGGGACCACGGCTCTTCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CCA 90 bp | ACTGAGGAGGCGCGGGAGCCTAGGGCGGAAAAAGCTGAAGAGCCGTaGTCCCGGAGAAAAGGAAGTGAGCAGTCTCAATGGAGGCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: TEEAREPRAEKAEEP*SRRKGSEQSQWRPE Trigger: CTCGGGCCTCCATTGAGACTGCTCACTTCCTTTTCTCCGGGACCACGGCTCTTCAGCTTTTTCCGCCCTAGGCTCCCGCGCCTCCTCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CCA 90 bp | GTGGGCCAAATCCCATCTCCGGGGAGCCTTCAAATAACTCTCCCATaGGGAACTGAGGAGGCGCGGGAGCCTAGGGCGGAAAAAGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: VGQIPSPGSLQITLP*GTEEAREPRAEKAE Trigger: TTCAGCTTTTTCCGCCCTAGGCTCCCGCGCCTCCTCAGTTCCCCATGGGAGAGTTATTTGAAGGCTCCCCGGAGATGGGATTTGGCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CCA 90 bp | AATTACACCACTGCGTTGAAGACTGGGACTTTTACCAGCTATTCGTaGTTGCCTTGTTGTGATTTCACAGCGGGAGGCAGATGTGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: NYTTALKTGTFTSYS*LPCCDFTAGGRCGR Trigger: CCTGCCACATCTGCCTCCCGCTGTGAAATCACAACAAGGCAACCACGAATAGCTGGTAAAAGTCCCAGTCTTCAACGCAGTGGTGTAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS CCA 72 bp | GCTGCCAGGGCGCCGCCCGGGACCCCAGAGCATACCTaGTTCCCTTCCTGGTGGCCGGTCATCGCAGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: AARAPPGTPEHT*FPSWWPVIAVP Trigger: GGGGACTGCGATGACCGGCCACCAGGAAGGGAACCAGGTATGCTCTGGGGTCCCGGGCGGCGCCCTGGCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS GCA 72 bp | GGGCAAAAGTCGCGCACTACCTGCGGGAACGTCCGCTaGCAGGGCGCCGCCCGGGACCCCAGAGCATACCTG | + |
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Preference number: 6 (lower is better) Translates to: GQKSRTTCGNVR*QGAARDPRAYL Trigger: CAGGTATGCTCTGGGGTCCCGGGCGGCGCCCTGGCAGCGGACGTTCCCGCAGGTAGTGCGCGACTTTTGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CAA 72 bp | GGCCGCCTCTCTGCGCCTAGCCGGGCGGGCCTTGACTaGCTAGGATTGGTGGGCCAAATCCCATCTCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: GRLSAPSRAGLD*LGLVGQIPSPG Trigger: CCCCGGAGATGGGATTTGGCCCACCAATCCTAGCAAGTCAAGGCCCGCCCGGCTAGGCGCAGAGAGGCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CAA 90 bp | CGGGAGGGAGGCCGCCTCTCTGCGCCTAGCCGGGCGGGCCTTGACTaGCTAGGATTGGTGGGCCAAATCCCATCTCCGGGGAGCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: REGGRLSAPSRAGLD*LGLVGQIPSPGSLQ Trigger: TTGAAGGCTCCCCGGAGATGGGATTTGGCCCACCAATCCTAGCAAGTCAAGGCCCGCCCGGCTAGGCGCAGAGAGGCGGCCTCCCTCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CCA 72 bp | ACAATGCGGTCAGCCCTGGTGCAGGAAAAGTTCAGTTaGCAGCCCTTCGCGAGCAGGTCCTCCCCAGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: TMRSALVQEKFS*QPFASRSSPAR Trigger: GCGGGCTGGGGAGGACCTGCTCGCGAAGGGCTGCCAACTGAACTTTTCCTGCACCAGGGCTGACCGCATTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS CCA 72 bp | TCCAAGGCCACCCTGCAGGCAGCAGCGACTTCTTCCTaGGGCAAAAGTCGCGCACTACCTGCGGGAACGTCC | + |
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Preference number: 6 (lower is better) Translates to: SKATLQAAATSS*GKSRALPAGTS Trigger: GGACGTTCCCGCAGGTAGTGCGCGACTTTTGCCCCAGGAAGAAGTCGCTGCTGCCTGCAGGGTGGCCTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CCA 72 bp | CCGTGGTCCCGGAGAAAAGGAAGTGAGCAGTCTCAATaGAGGCCCGAGCCTCTCCAAGGCCACCCTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PWSRRKGSEQSQ*RPEPLQGHPAG Trigger: GCCTGCAGGGTGGCCTTGGAGAGGCTCGGGCCTCCATTGAGACTGCTCACTTCCTTTTCTCCGGGACCACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CAA 72 bp | CACAATGCGGTCAGCCCTGGTGCAGGAAAAGTTCAGTaGGCAGCCCTTCGCGAGCAGGTCCTCCCCAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: HNAVSPGAGKVQ*AALREQVLPSP Trigger: CGGGCTGGGGAGGACCTGCTCGCGAAGGGCTGCCAACTGAACTTTTCCTGCACCAGGGCTGACCGCATTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS CAA 90 bp | GGCCGCCTCTCTGCGCCTAGCCGGGCGGGCCTTGACTTGCTAGGATaGGTGGGCCAAATCCCATCTCCGGGGAGCCTTCAAATAACTCTC | + |
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Preference number: 6 (lower is better) Translates to: GRLSAPSRAGLDLLG*VGQIPSPGSLQITL Trigger: GAGAGTTATTTGAAGGCTCCCCGGAGATGGGATTTGGCCCACCAATCCTAGCAAGTCAAGGCCCGCCCGGCTAGGCGCAGAGAGGCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CAA 72 bp | TCTGCGCCTAGCCGGGCGGGCCTTGACTTGCTAGGATaGGTGGGCCAAATCCCATCTCCGGGGAGCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: SAPSRAGLDLLG*VGQIPSPGSLQ Trigger: TTGAAGGCTCCCCGGAGATGGGATTTGGCCCACCAATCCTAGCAAGTCAAGGCCCGCCCGGCTAGGCGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CCA 72 bp | ATCCCATCTCCGGGGAGCCTTCAAATAACTCTCCCATaGGGAACTGAGGAGGCGCGGGAGCCTAGGGCGGAA | + |
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Preference number: 6 (lower is better) Translates to: IPSPGSLQITLP*GTEEAREPRAE Trigger: TTCCGCCCTAGGCTCCCGCGCCTCCTCAGTTCCCCATGGGAGAGTTATTTGAAGGCTCCCCGGAGATGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CAA 90 bp | CCTTCCTGGTGGCCGGTCATCGCAGTCCCCAAGTCAACACTCGACTaGTCACTTTGCACCACAATGCGGTCAGCCCTCCCTACTCCCGAC | + |
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Preference number: 6 (lower is better) Translates to: PSWWPVIAVPKSTLD*SLCTTMRSALPTPD Trigger: GTCGGGAGTAGGGAGGGCTGACCGCATTGTGGTGCAAAGTGACAAGTCGAGTGTTGACTTGGGGACTGCGATGACCGGCCACCAGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CCA 72 bp | GCGCGGGAGCCTAGGGCGGAAAAAGCTGAAGAGCCGTaGTCCCGGAGAAAAGGAAGTGAGCAGTCTCAATGG | + |
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Preference number: 6 (lower is better) Translates to: AREPRAEKAEEP*SRRKGSEQSQW Trigger: CCATTGAGACTGCTCACTTCCTTTTCTCCGGGACCACGGCTCTTCAGCTTTTTCCGCCCTAGGCTCCCGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CAA 90 bp | GTGGCCGGTCATCGCAGTCCCCAAGTCAACACTCGACTTGTCACTTaGCACCACAATGCGGTCAGCCCTCCCTACTCCCGACAGAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: VAGHRSPQVNTRLVT*HHNAVSPPYSRQSC Trigger: ACAGCTCTGTCGGGAGTAGGGAGGGCTGACCGCATTGTGGTGCAAAGTGACAAGTCGAGTGTTGACTTGGGGACTGCGATGACCGGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CAA 72 bp | TGGCCGGTCATCGCAGTCCCCAAGTCAACACTCGACTaGTCACTTTGCACCACAATGCGGTCAGCCCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: WPVIAVPKSTLD*SLCTTMRSALP Trigger: AGGGAGGGCTGACCGCATTGTGGTGCAAAGTGACAAGTCGAGTGTTGACTTGGGGACTGCGATGACCGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS GCA 72 bp | ATCGCAGTCCCCAAGTCAACACTCGACTTGTCACTTTaGACCACAATGCGGTCAGCCCTCCCTACTCCCGAC | + |
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Preference number: 6 (lower is better) Translates to: IAVPKSTLDLSL*TTMRSALPTPD Trigger: GTCGGGAGTAGGGAGGGCTGACCGCATTGTGGTGCAAAGTGACAAGTCGAGTGTTGACTTGGGGACTGCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CAA 72 bp | CATCGCAGTCCCCAAGTCAACACTCGACTTGTCACTTaGCACCACAATGCGGTCAGCCCTCCCTACTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: HRSPQVNTRLVT*HHNAVSPPYSR Trigger: TCGGGAGTAGGGAGGGCTGACCGCATTGTGGTGCAAAGTGACAAGTCGAGTGTTGACTTGGGGACTGCGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584273.1 |
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| CDS CAA 72 bp | CAGCTACTCATCGCAGTCCCCAAGTCAACACTCGACTaGTCACTTTGCACCACAATGCGGTCAGCCCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: QLLIAVPKSTLD*SLCTTMRSALV Trigger: CACCAGGGCTGACCGCATTGTGGTGCAAAGTGACAAGTCGAGTGTTGACTTGGGGACTGCGATGAGTAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS CAA 90 bp | TGCAGTGTCCAGCTACTCATCGCAGTCCCCAAGTCAACACTCGACTaGTCACTTTGCACCACAATGCGGTCAGCCCTGGTGCAGGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: CSVQLLIAVPKSTLD*SLCTTMRSALVQEK Trigger: CTTTTCCTGCACCAGGGCTGACCGCATTGTGGTGCAAAGTGACAAGTCGAGTGTTGACTTGGGGACTGCGATGAGTAGCTGGACACTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS GCA 72 bp | ATCGCAGTCCCCAAGTCAACACTCGACTTGTCACTTTaGACCACAATGCGGTCAGCCCTGGTGCAGGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: IAVPKSTLDLSL*TTMRSALVQEK Trigger: CTTTTCCTGCACCAGGGCTGACCGCATTGTGGTGCAAAGTGACAAGTCGAGTGTTGACTTGGGGACTGCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS CAA 72 bp | CATCGCAGTCCCCAAGTCAACACTCGACTTGTCACTTaGCACCACAATGCGGTCAGCCCTGGTGCAGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: HRSPQVNTRLVT*HHNAVSPGAGK Trigger: TTTTCCTGCACCAGGGCTGACCGCATTGTGGTGCAAAGTGACAAGTCGAGTGTTGACTTGGGGACTGCGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS CAA 72 bp | GGGAGGCAGATGTGGCAGGCAGCAAGTCACCTTTGCTaGACTTCTACTCCGTTGACAGTTCACGTAGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: GRQMWQAASHLC*TSTPLTVHVVG Trigger: CCCTACTACGTGAACTGTCAACGGAGTAGAAGTCAAGCAAAGGTGACTTGCTGCCTGCCACATCTGCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS CAA 90 bp | CCAGCTACTCATCGCAGTCCCCAAGTCAACACTCGACTTGTCACTTaGCACCACAATGCGGTCAGCCCTGGTGCAGGAAAAGTTCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: PATHRSPQVNTRLVT*HHNAVSPGAGKVQL Trigger: CAACTGAACTTTTCCTGCACCAGGGCTGACCGCATTGTGGTGCAAAGTGACAAGTCGAGTGTTGACTTGGGGACTGCGATGAGTAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS GCA 72 bp | ATCTGCCCTGCATCTCCCAATATCTGGTGTGATAGATaGAGTGTCCAGCTACTCATCGCAGTCCCCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: ICPASPNIWCDR*SVQLLIAVPKS Trigger: TGACTTGGGGACTGCGATGAGTAGCTGGACACTGCATCTATCACACCAGATATTGGGAGATGCAGGGCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS CCA 72 bp | ACTGCGTTGAAGACTGGGACTTTTACCAGCTATTCGTaGTTGCCTTGTTGTGATTTCACAGCGGGAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TALKTGTFTSYS*LPCCDFTAGGR Trigger: TCTGCCTCCCGCTGTGAAATCACAACAAGGCAACCACGAATAGCTGGTAAAAGTCCCAGTCTTCAACGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS CAA 72 bp | GCGTTGAAGACTGGGACTTTTACCAGCTATTCGTGGTaGCCTTGTTGTGATTTCACAGCGGGAGGCAGATGT | + |
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Preference number: 6 (lower is better) Translates to: ALKTGTFTSYSW*PCCDFTAGGRC Trigger: ACATCTGCCTCCCGCTGTGAAATCACAACAAGGCAACCACGAATAGCTGGTAAAAGTCCCAGTCTTCAACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS CAA 90 bp | CAGATGTGGCAGGCAGCAAGTCACCTTTGCTTGACTTCTACTCCGTaGACAGTTCACGTAGTAGGGCTCCTTAATATTGACTGGATAGAT | + |
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Preference number: 6 (lower is better) Translates to: QMWQAASHLCLTSTP*TVHVVGLLNIDWID Trigger: ATCTATCCAGTCAATATTAAGGAGCCCTACTACGTGAACTGTCAACGGAGTAGAAGTCAAGCAAAGGTGACTTGCTGCCTGCCACATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS CAA 72 bp | CAGGCAGCAAGTCACCTTTGCTTGACTTCTACTCCGTaGACAGTTCACGTAGTAGGGCTCCTTAATATTGAC | + |
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Preference number: 6 (lower is better) Translates to: QAASHLCLTSTP*TVHVVGLLNID Trigger: GTCAATATTAAGGAGCCCTACTACGTGAACTGTCAACGGAGTAGAAGTCAAGCAAAGGTGACTTGCTGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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| CDS CCA 72 bp | ATTTATCATAGGAAATTACACCACTGCGTTGAAGACTaGGACTTTTACCAGCTATTCGTGGTTGCCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: IYHRKLHHCVED*DFYQLFVVALL Trigger: CAACAAGGCAACCACGAATAGCTGGTAAAAGTCCCAGTCTTCAACGCAGTGGTGTAATTTCCTATGATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557729.2 |
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