Pregenerated sensors for LINC01948 (Homo sapiens)
Ensembl gene IDs: ENSG00000248727Ensembl transcript IDs: ENST00000506836.5, ENST00000511661.3, ENST00000653172.1, ENST00000665339.1
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGCAGACATGCTGCAAGAAGCGGAGGCAGCCCTGTGAACTCGCCTaGCTCCGCAGGGAGGGGCGAGGCTGTCCAGGTCGCAGGTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: EQTCCKKRRQPCELA*LRREGRGCPGRRWS Trigger: GCTCCACCTGCGACCTGGACAGCCTCGCCCCTCCCTGCGGAGCCAGGCGAGTTCACAGGGCTGCCTCCGCTTCTTGCAGCATGTCTGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511661.3 |
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| CDS CCA 90 bp | GGAGACAAACCACACCAGGCAGGGCCACGTGGGGTAGCCTCAGGGTaGTCAGGAGGCAGAAAGCAGGGGTACAGGGAAAGCCGAGGCTAC | + |
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Preference number: 5 (lower is better) Translates to: GDKPHQAGPRGVASG*SGGRKQGYRESRGY Trigger: GTAGCCTCGGCTTTCCCTGTACCCCTGCTTTCTGCCTCCTGACCACCCTGAGGCTACCCCACGTGGCCCTGCCTGGTGTGGTTTGTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653172.1 |
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| CDS CCA 90 bp | ACAGGTCCTAGAGACAGGAGACAAACCACACCAGGCAGGGCCACGTaGGGTAGCCTCAGGGTGGTCAGGAGGCAGAAAGCAGGGGTACAG | + |
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Preference number: 5 (lower is better) Translates to: TGPRDRRQTTPGRAT*GSLRVVRRQKAGVQ Trigger: CTGTACCCCTGCTTTCTGCCTCCTGACCACCCTGAGGCTACCCCACGTGGCCCTGCCTGGTGTGGTTTGTCTCCTGTCTCTAGGACCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653172.1 |
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| CDS CCA 90 bp | GACTGCAACGCCCCAAGTCCCTCCTTCTCTCTCTGTGCCTTGGGATaGGCTTTGTGCCAGCTGTGCCCATCCTGCTGTTCTGCAGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: DCNAPSPSFSLCALG*ALCQLCPSCCSAAW Trigger: CCAAGCTGCAGAACAGCAGGATGGGCACAGCTGGCACAAAGCCCATCCCAAGGCACAGAGAGAGAAGGAGGGACTTGGGGCGTTGCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS TCA 90 bp | ATCACTGTCTACCCCTCAGACACCACGTGCTGCATGACTGTGTCCTaGGGCAGCCACATGGCTGCCAGCTCTGAAGGTCCTGAGATCCCC | + |
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Preference number: 5 (lower is better) Translates to: ITVYPSDTTCCMTVS*GSHMAASSEGPEIP Trigger: GGGGATCTCAGGACCTTCAGAGCTGGCAGCCATGTGGCTGCCTCAGGACACAGTCATGCAGCACGTGGTGTCTGAGGGGTAGACAGTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS GCA 90 bp | CAGAGGCTCCAACCAAGAGCAGGGAAGGGCCTTGTGGGAGGTGAGTaGATTTTGGATATGGGGAGCAAGGCTGGTGGGATTCTGCTAACG | + |
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Preference number: 5 (lower is better) Translates to: QRLQPRAGKGLVGGE*ILDMGSKAGGILLT Trigger: CGTTAGCAGAATCCCACCAGCCTTGCTCCCCATATCCAAAATGCACTCACCTCCCACAAGGCCCTTCCCTGCTCTTGGTTGGAGCCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653172.1 ENST00000665339.1 |
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| CDS CCA 90 bp | TGGCAACTCCTCAGATGTCTGGGAAGAGGGATCATCACCCAGGCCTaGGAGCTCTGCGCAGTTTTGTCTGCCTTGGCTCCAAAGTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: WQLLRCLGRGIITQA*ELCAVLSALAPKCS Trigger: AGAGCACTTTGGAGCCAAGGCAGACAAAACTGCGCAGAGCTCCCAGGCCTGGGTGATGATCCCTCTTCCCAGACATCTGAGGAGTTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS TCA 90 bp | GCAGCCACATGGCTGCCAGCTCTGAAGGTCCTGAGATCCCCATTCTaGGGCCCTTCGCTGACTCACTGCTCTCATTCTTCTTTCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: AATWLPALKVLRSPF*GPSLTHCSHSSFSV Trigger: GACAGAGAAAGAAGAATGAGAGCAGTGAGTCAGCGAAGGGCCTCAGAATGGGGATCTCAGGACCTTCAGAGCTGGCAGCCATGTGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS TCA 90 bp | AACTCAGAGGCTCCAACCAAGAGCAGGGAAGGGCCTTGTGGGAGGTaGGTGCATTTTGGATATGGGGAGCAAGGCTGGTGGGATTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: NSEAPTKSREGPCGR*VHFGYGEQGWWDSA Trigger: AGCAGAATCCCACCAGCCTTGCTCCCCATATCCAAAATGCACTCACCTCCCACAAGGCCCTTCCCTGCTCTTGGTTGGAGCCTCTGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653172.1 ENST00000665339.1 |
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| CDS GCA 90 bp | AAGAGGGATCATCACCCAGGCCTGGGAGCTCTGCGCAGTTTTGTCTaGCTTGGCTCCAAAGTGCTCTTTGCCCTTAACACTGCACCACTG | + |
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Preference number: 5 (lower is better) Translates to: KRDHHPGLGALRSFV*LGSKVLFALNTAPL Trigger: CAGTGGTGCAGTGTTAAGGGCAAAGAGCACTTTGGAGCCAAGGCAGACAAAACTGCGCAGAGCTCCCAGGCCTGGGTGATGATCCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS GCA 90 bp | CTAGGAGTCTTAAGTGCTGAGTTCCCTAGTGGGAACTCACTGGACTaGAACGCCCCAAGTCCCTCCTTCTCTCTCTGTGCCTTGGGATGG | + |
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Preference number: 5 (lower is better) Translates to: LGVLSAEFPSGNSLD*NAPSPSFSLCALGW Trigger: CCATCCCAAGGCACAGAGAGAGAAGGAGGGACTTGGGGCGTTGCAGTCCAGTGAGTTCCCACTAGGGAACTCAGCACTTAAGACTCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 90 bp | GAAATGGATGAGGTGAGAAAGGCCCGGACCACACCGAGAATCGAATaGATGGTAAACATAGGGCCACGGGGAAGTCTTGACACCGCTCGG | + |
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Preference number: 5 (lower is better) Translates to: EMDEVRKARTTPRIE*MVNIGPRGSLDTAR Trigger: CCGAGCGGTGTCAAGACTTCCCCGTGGCCCTATGTTTACCATGCATTCGATTCTCGGTGTGGTCCGGGCCTTTCTCACCTCATCCATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS TCA 90 bp | TGTCTGACCAGCCAACAGGCTCTAGACCTGAGCCATCTAGGAAGATaGGGCCCCACCCCTAACTGGTGCCCTCTTTGCAGATTCACTGAT | + |
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Preference number: 5 (lower is better) Translates to: CLTSQQALDLSHLGR*GPTPNWCPLCRFTD Trigger: ATCAGTGAATCTGCAAAGAGGGCACCAGTTAGGGGTGGGGCCTCATCTTCCTAGATGGCTCAGGTCTAGAGCCTGTTGGCTGGTCAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653172.1 ENST00000665339.1 |
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| CDS CCA 90 bp | TGGTTTCCCTGCTGCTTGTCATCAGGGCCACACTCAGGGCTCCTCTaGGCAGTTCATAGTACAGATGTTTGCTCTCTTCCTGGTCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: WFPCCLSSGPHSGLL*AVHSTDVCSLPGQL Trigger: CAGCTGACCAGGAAGAGAGCAAACATCTGTACTATGAACTGCCCAGAGGAGCCCTGAGTGTGGCCCTGATGACAAGCAGCAGGGAAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665339.1 |
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| CDS CCA 90 bp | GTTGTTGGAAGAATCCATCTCCTTGGGGTTGTAGGACTGAAGTCCTaGTTTCCCTGCTGCTTGTCATCAGGGCCACACTCAGGGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: VVGRIHLLGVVGLKS*FPCCLSSGPHSGLL Trigger: GAGGAGCCCTGAGTGTGGCCCTGATGACAAGCAGCAGGGAAACCAGGACTTCAGTCCTACAACCCCAAGGAGATGGATTCTTCCAACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665339.1 |
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| CDS TCA 90 bp | ATTCTTCTTTCTCTGTCCACTCTCAGGGCAACTACATCCACACGGTaGAGGCAGGGCCTGTGTAGTGGATGCCAGGCTGTCTTCACGTAC | + |
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Preference number: 5 (lower is better) Translates to: ILLSLSTLRATTSTR*RQGLCSGCQAVFTY Trigger: GTACGTGAAGACAGCCTGGCATCCACTACACAGGCCCTGCCTTCACCGTGTGGATGTAGTTGCCCTGAGAGTGGACAGAGAAAGAAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS TCA 90 bp | ACCGAGAATCGAATGCATGGTAAACATAGGGCCACGGGGAAGTCTTaGCACCGCTCGGCAAGATCTCTCACCGATGGATCCACCCTCTAT | + |
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Preference number: 5 (lower is better) Translates to: TENRMHGKHRATGKS*HRSARSLTDGSTLY Trigger: ATAGAGGGTGGATCCATCGGTGAGAGATCTTGCCGAGCGGTGTCAAGACTTCCCCGTGGCCCTATGTTTACCATGCATTCGATTCTCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 90 bp | TTGGAAGAACGTGCTTCTTGTTGGACCTACAAGTGGGGAGCATCTTaGCTTGTCCGGCCTGTCCCAGTTTCTCGGGAACCCTTGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LEERASCWTYKWGAS*LVRPVPVSREPLRF Trigger: AAACCTCAAGGGTTCCCGAGAAACTGGGACAGGCCGGACAAGGCAAGATGCTCCCCACTTGTAGGTCCAACAAGAAGCACGTTCTTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 90 bp | CCAGGAAGCGCTGTTTTCGGAAGTGTTGACCCAGCAGCTGGTCCCTaGTGCTCTAATGACACGATGTGTGCTTTCACTTTTTCACTCCCA | + |
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Preference number: 5 (lower is better) Translates to: PGSAVFGSVDPAAGP*CSNDTMCAFTFSLP Trigger: TGGGAGTGAAAAAGTGAAAGCACACATCGTGTCATTAGAGCAGCAGGGACCAGCTGCTGGGTCAACACTTCCGAAAACAGCGCTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 90 bp | TTGAAGAATGTGGGACTAATAACCCTGGGTAGGGTCACAAGGCCCTaGAGAGGTGATGCCATGAAGTTGCCTACACAGAACTGCCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: LKNVGLITLGRVTRP*RGDAMKLPTQNCLP Trigger: AGGGAGGCAGTTCTGTGTAGGCAACTTCATGGCATCACCTCTGCAGGGCCTTGTGACCCTACCCAGGGTTATTAGTCCCACATTCTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CCA 90 bp | GCCGAAACAATGAGAGAACATCAATATGGCAACTCCTCAGATGTCTaGGAAGAGGGATCATCACCCAGGCCTGGGAGCTCTGCGCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: AETMREHQYGNSSDV*EEGSSPRPGSSAQF Trigger: AAACTGCGCAGAGCTCCCAGGCCTGGGTGATGATCCCTCTTCCCAGACATCTGAGGAGTTGCCATATTGATGTTCTCTCATTGTTTCGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CCA 90 bp | CACCCTAAATCTTTGGAAGAACGTGCTTCTTGTTGGACCTACAAGTaGGGAGCATCTTGCCTTGTCCGGCCTGTCCCAGTTTCTCGGGAA | + |
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Preference number: 5 (lower is better) Translates to: HPKSLEERASCWTYK*GASCLVRPVPVSRE Trigger: TTCCCGAGAAACTGGGACAGGCCGGACAAGGCAAGATGCTCCCCACTTGTAGGTCCAACAAGAAGCACGTTCTTCCAAAGATTTAGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS CCA 90 bp | GGGGGCTTCCAAGCTCATTCAGGTTGTTGGAAGAATCCATCTCCTTaGGGTTGTAGGACTGAAGTCCTGGTTTCCCTGCTGCTTGTCATC | + |
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Preference number: 5 (lower is better) Translates to: GGFQAHSGCWKNPSP*GCRTEVLVSLLLVI Trigger: GATGACAAGCAGCAGGGAAACCAGGACTTCAGTCCTACAACCCCAAGGAGATGGATTCTTCCAACAACCTGAATGAGCTTGGAAGCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665339.1 |
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| CDS TCA 90 bp | TGTGCTTTCACTTTTTCACTCCCAAAACGACGTGGTTTGGAGTCTTaGGAGCCTTGGAAATCGCTGCCCGTGGAGGGAAAGGTCTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: CAFTFSLPKRRGLES*EPWKSLPVEGKVWR Trigger: TCTCCAGACCTTTCCCTCCACGGGCAGCGATTTCCAAGGCTCTCAAGACTCCAAACCACGTCGTTTTGGGAGTGAAAAAGTGAAAGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 90 bp | TTTCTCTTTCTCTTAAGCATCCTGGACCATAAAGCCCTAGTGTGCTaGTCCTACCTTGCCAGTAGGACTCCTGTCTCAGCTCCGTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: FLFLLSILDHKALVC*SYLASRTPVSAPSP Trigger: AGGAGACGGAGCTGAGACAGGAGTCCTACTGGCAAGGTAGGAGCAGCACACTAGGGCTTTATGGTCCAGGATGCTTAAGAGAAAGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CCA 90 bp | GATGCTGGGCTCAGCATCAGCGTTCAGTTCTCCTTAATTACAGGTTaGCTTGTTTTGTTGCGCAATAGTGCCCCAGCCCGGATGAATGTC | + |
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Preference number: 5 (lower is better) Translates to: DAGLSISVQFSLITG*LVLLRNSAPARMNV Trigger: GACATTCATCCGGGCTGGGGCACTATTGCGCAACAAAACAAGCCAACCTGTAATTAAGGAGAACTGAACGCTGATGCTGAGCCCAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS CCA 90 bp | ATCAAAGGCACACTCCCAGCTGAGCCCTTTGCTGTGTCTAAGGATTaGCCAGCCCTGGGAGGGGCAGTCAGACAGGTTTTTAAGATATTA | + |
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Preference number: 5 (lower is better) Translates to: IKGTLPAEPFAVSKD*PALGGAVRQVFKIL Trigger: TAATATCTTAAAAACCTGTCTGACTGCCCCTCCCAGGGCTGGCCAATCCTTAGACACAGCAAAGGGCTCAGCTGGGAGTGTGCCTTTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653172.1 |
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| CDS TCA 90 bp | CAGTCTGTGAACTACCCAGACCCCCACGTTCACAGAATACTAGGATaGGGAGGATCCCAAGGAACACCTGCATCAACTCTCATGTTCTAC | + |
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Preference number: 5 (lower is better) Translates to: QSVNYPDPHVHRILG*GGSQGTPASTLMFY Trigger: GTAGAACATGAGAGTTGATGCAGGTGTTCCTTGGGATCCTCCTCATCCTAGTATTCTGTGAACGTGGGGGTCTGGGTAGTTCACAGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 90 bp | GGAAGCGCTGTTTTCGGAAGTGTTGACCCAGCAGCTGGTCCCTGCTaGTCTAATGACACGATGTGTGCTTTCACTTTTTCACTCCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: GSAVFGSVDPAAGPC*SNDTMCAFTFSLPK Trigger: TTTTGGGAGTGAAAAAGTGAAAGCACACATCGTGTCATTAGAGCAGCAGGGACCAGCTGCTGGGTCAACACTTCCGAAAACAGCGCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 90 bp | ACATTTCTCTTTCTCTTAAGCATCCTGGACCATAAAGCCCTAGTGTaGTGCTCCTACCTTGCCAGTAGGACTCCTGTCTCAGCTCCGTCT | + |
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Preference number: 5 (lower is better) Translates to: TFLFLLSILDHKALV*CSYLASRTPVSAPS Trigger: AGACGGAGCTGAGACAGGAGTCCTACTGGCAAGGTAGGAGCAGCACACTAGGGCTTTATGGTCCAGGATGCTTAAGAGAAAGAGAAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS TCA 90 bp | ACCTCCCTGGGCTGGTGTCACCTCTTACTTTGCAATTCAAAACGTTaGAGAAGGTGCGACCTGTCTAGATTTTCGTGTAGCCTTCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: TSLGWCHLLLCNSKR*RRCDLSRFSCSLLS Trigger: GGAGAGAAGGCTACACGAAAATCTAGACAGGTCGCACCTTCTTCAACGTTTTGAATTGCAAAGTAAGAGGTGACACCAGCCCAGGGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS TCA 90 bp | CGCTCGGCAAGATCTCTCACCGATGGATCCACCCTCTATGTTTTCTaGTTGGACACATTTCCTGAGATGGGAAGGATCATGCTATTGGCT | + |
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Preference number: 5 (lower is better) Translates to: RSARSLTDGSTLYVF*LDTFPEMGRIMLLA Trigger: AGCCAATAGCATGATCCTTCCCATCTCAGGAAATGTGTCCAATCAGAAAACATAGAGGGTGGATCCATCGGTGAGAGATCTTGCCGAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 90 bp | CCATACCTTCTCTTCTCCATGTGTCCTATGCTCTCGCACTTTTTGTaGTGCTTAGCGTTTTGCCCAGAGGTGTGCCAGAGATTATTGCTC | + |
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Preference number: 5 (lower is better) Translates to: PYLLFSMCPMLSHFL*CLAFCPEVCQRLLL Trigger: GAGCAATAATCTCTGGCACACCTCTGGGCAAAACGCTAAGCAGCACAAAAAGTGCGAGAGCATAGGACACATGGAGAAGAGAAGGTATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS CCA 90 bp | TTTCGATCATTCCAGCTCAGCCGAAACAATGAGAGAACATCAATATaGCAACTCCTCAGATGTCTGGGAAGAGGGATCATCACCCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: FRSFQLSRNNERTSI*QLLRCLGRGIITQA Trigger: GGCCTGGGTGATGATCCCTCTTCCCAGACATCTGAGGAGTTGCCATATTGATGTTCTCTCATTGTTTCGGCTGAGCTGGAATGATCGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CCA 90 bp | CGGCAAGATCTCTCACCGATGGATCCACCCTCTATGTTTTCTGATTaGACACATTTCCTGAGATGGGAAGGATCATGCTATTGGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: RQDLSPMDPPSMFSD*THFLRWEGSCYWLR Trigger: CCTCAGCCAATAGCATGATCCTTCCCATCTCAGGAAATGTGTCCAATCAGAAAACATAGAGGGTGGATCCATCGGTGAGAGATCTTGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS CCA 90 bp | ATTCCAAAGCCAAGCGAAACTCTCAGCAGTCTTTCCCCAAGATGCTaGGCTCAGCATCAGCGTTCAGTTCTCCTTAATTACAGGTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: IPKPSETLSSLSPRC*AQHQRSVLLNYRLA Trigger: AGCCAACCTGTAATTAAGGAGAACTGAACGCTGATGCTGAGCCCAGCATCTTGGGGAAAGACTGCTGAGAGTTTCGCTTGGCTTTGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS CCA 90 bp | CACGCACCTGCCAATCAGTTTTATCACTTGCCATTAGGAGGTCCTTaGGAAGCAATGGGAAAGCTCCCCAGTCCAGAGAAACTAACTTCA | + |
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Preference number: 5 (lower is better) Translates to: HAPANQFYHLPLGGP*EAMGKLPSPEKLTS Trigger: TGAAGTTAGTTTCTCTGGACTGGGGAGCTTTCCCATTGCTTCCCAAGGACCTCCTAATGGCAAGTGATAAAACTGATTGGCAGGTGCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653172.1 ENST00000665339.1 |
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| CDS GCA 90 bp | ATGCTCTCGCACTTTTTGTGCTGCTTAGCGTTTTGCCCAGAGGTGTaGCAGAGATTATTGCTCATTCTTTCTCCTTCCACGGTCACAACA | + |
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Preference number: 5 (lower is better) Translates to: MLSHFLCCLAFCPEV*QRLLLILSPSTVTT Trigger: TGTTGTGACCGTGGAAGGAGAAAGAATGAGCAATAATCTCTGGCACACCTCTGGGCAAAACGCTAAGCAGCACAAAAAGTGCGAGAGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 90 bp | TCCATGTGTCCTATGCTCTCGCACTTTTTGTGCTGCTTAGCGTTTTaGCCAGAGGTGTGCCAGAGATTATTGCTCATTCTTTCTCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SMCPMLSHFLCCLAF*PEVCQRLLLILSPS Trigger: GGAAGGAGAAAGAATGAGCAATAATCTCTGGCACACCTCTGGGCAAAACGCTAAGCAGCACAAAAAGTGCGAGAGCATAGGACACATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS CCA 90 bp | AGTATTCTGCTTGCCCTCTGCCACCTTCACAACACCCTAAATCTTTaGAAGAACGTGCTTCTTGTTGGACCTACAAGTGGGGAGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: SILLALCHLHNTLNL*KNVLLVGPTSGEHL Trigger: AAGATGCTCCCCACTTGTAGGTCCAACAAGAAGCACGTTCTTCCAAAGATTTAGGGTGTTGTGAAGGTGGCAGAGGGCAAGCAGAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS TCA 90 bp | GGGGAGCAAGGCTGGTGGGATTCTGCTAACGAAACTGATCACAGGTaGCAGGGCTCTCCTTTGAACTTGATTATTTTTAAAGTTCACCTC | + |
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Preference number: 5 (lower is better) Translates to: GEQGWWDSANETDHR*QGSPLNLIIFKVHL Trigger: GAGGTGAACTTTAAAAATAATCAAGTTCAAAGGAGAGCCCTGTCACCTGTGATCAGTTTCGTTAGCAGAATCCCACCAGCCTTGCTCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000653172.1 ENST00000665339.1 |
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| CDS GCA 90 bp | TACCTTCTCTTCTCCATGTGTCCTATGCTCTCGCACTTTTTGTGCTaGTTAGCGTTTTGCCCAGAGGTGTGCCAGAGATTATTGCTCATT | + |
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Preference number: 5 (lower is better) Translates to: YLLFSMCPMLSHFLC*LAFCPEVCQRLLLI Trigger: AATGAGCAATAATCTCTGGCACACCTCTGGGCAAAACGCTAAGCAGCACAAAAAGTGCGAGAGCATAGGACACATGGAGAAGAGAAGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 90 bp | TTCTGTTTCTCATGCCATGAGTTGACTATGACTCTCTCACGCACCTaGCAATCAGTTTTATCACTTGCCATTAGGAGGTCCTTGGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: FCFSCHELTMTLSRT*QSVLSLAIRRSLGS Trigger: GCTTCCCAAGGACCTCCTAATGGCAAGTGATAAAACTGATTGGCAGGTGCGTGAGAGAGTCATAGTCAACTCATGGCATGAGAAACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653172.1 ENST00000665339.1 |
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| CDS CCA 90 bp | ATGGATCCACCCTCTATGTTTTCTGATTGGACACATTTCCTGAGATaGGAAGGATCATGCTATTGGCTGAGGCTGCATCAGGGGAGTAAT | + |
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Preference number: 5 (lower is better) Translates to: MDPPSMFSDWTHFLR*EGSCYWLRLHQGSN Trigger: ATTACTCCCCTGATGCAGCCTCAGCCAATAGCATGATCCTTCCCATCTCAGGAAATGTGTCCAATCAGAAAACATAGAGGGTGGATCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS TCA 90 bp | GTTTTCCCTCTGAGCCTCCAGAAGGAACTGATTCTGCCAGCACCTTaGTTTCAGGCTTCTGGCCTCCAAAACTGTGAGAGAATTAATTTT | + |
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Preference number: 5 (lower is better) Translates to: VFPLSLQKELILPAP*FQASGLQNCERINF Trigger: AAAATTAATTCTCTCACAGTTTTGGAGGCCAGAAGCCTGAAATCAAGGTGCTGGCAGAATCAGTTCCTTCTGGAGGCTCAGAGGGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665339.1 |
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| CDS CCA 90 bp | TTCAGCAGGGAGGCACTTGATTCTGTGGCATTTGGCACTGCTCACTaGGCTTTCTTTTCTTTTCACTGTAAGACTCATGCATTAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSREALDSVAFGTAH*AFFSFHCKTHALDL Trigger: CAGATCTAATGCATGAGTCTTACAGTGAAAAGAAAAGAAAGCCCAGTGAGCAGTGCCAAATGCCACAGAATCAAGTGCCTCCCTGCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
||
| CDS TCA 90 bp | CATAGTCCCAGAATTATTTCGATCATTCCAGCTCAGCCGAAACAATaGGAGAACATCAATATGGCAACTCCTCAGATGTCTGGGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HSPRIISIIPAQPKQ*ENINMATPQMSGKR Trigger: CCTCTTCCCAGACATCTGAGGAGTTGCCATATTGATGTTCTCTCATTGTTTCGGCTGAGCTGGAATGATCGAAATAATTCTGGGACTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
||
| CDS TCA 90 bp | GCCATGTTGCAGTTTAGGTCAATCCAGCGCATGTTATCTGATAAATaGATTCCAAAGCCAAGCGAAACTCTCAGCAGTCTTTCCCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AMLQFRSIQRMLSDK*IPKPSETLSSLSPR Trigger: TCTTGGGGAAAGACTGCTGAGAGTTTCGCTTGGCTTTGGAATTCATTTATCAGATAACATGCGCTGGATTGACCTAAACTGCAACATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS TCA 90 bp | CAAGTTCCTCTGGCTGCCTATGTAAAGTCTAGGATGCCTGAGTGTTaGCATCCCAATCTCAGCTATATCTTCTCACCTCCATTTATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QVPLAAYVKSRMPEC*HPNLSYIFSPPFML Trigger: CAACATAAATGGAGGTGAGAAGATATAGCTGAGATTGGGATGTCAACACTCAGGCATCCTAGACTTTACATAGGCAGCCAGAGGAACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653172.1 |
||
| CDS GCA 90 bp | GAAGAAAGATCCTATTTATCCCAGTTCCCAGTGAAATGCCATTTCTaGTCCATACCTTCTCTTCTCCATGTGTCCTATGCTCTCGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: EERSYLSQFPVKCHF*SIPSLLHVSYALAL Trigger: AAGTGCGAGAGCATAGGACACATGGAGAAGAGAAGGTATGGAGCAGAAATGGCATTTCACTGGGAACTGGGATAAATAGGATCTTTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS GCA 90 bp | CACATGGGTCATCACAGGAAGACAAGGAAGCACAGCGACATACTTTaGTGTCTGTATAATTTCAGGAGATCTTATTGTCTTCATGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HMGHHRKTRKHSDIL*CLYNFRRSYCLHGA Trigger: AGCTCCATGAAGACAATAAGATCTCCTGAAATTATACAGACAGCAAAGTATGTCGCTGTGCTTCCTTGTCTTCCTGTGATGACCCATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506836.5 ENST00000511661.3 |
||
| CDS GCA 90 bp | TCTATGTTTTCTGATTGGACACATTTCCTGAGATGGGAAGGATCATaGTATTGGCTGAGGCTGCATCAGGGGAGTAATATTTACTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SMFSDWTHFLRWEGS*YWLRLHQGSNIYSG Trigger: TCCAGAGTAAATATTACTCCCCTGATGCAGCCTCAGCCAATAGCATGATCCTTCCCATCTCAGGAAATGTGTCCAATCAGAAAACATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS GCA 90 bp | ATGTGCACATGCATGTGCATTTGTGCTGTATTGTCAGTACACTGCTaGAGAACAGATTACCCCACACTCAGTCAATTAAAACAACACCCA | + |
|
Preference number: 5 (lower is better) Translates to: MCTCMCICAVLSVHC*RTDYPTLSQLKQHP Trigger: TGGGTGTTGTTTTAATTGACTGAGTGTGGGGTAATCTGTTCTGCAGCAGTGTACTGACAATACAGCACAAATGCACATGCATGTGCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665339.1 |
||
| CDS CCA 90 bp | CCAGTAAACCCTCTTCAGCTCCTTCTTCCAGTCTTTAGAGTCATATaGACTTTAACCCAATTTAAAGCTGTATACACGCCATGCCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PVNPLQLLLPVFRVI*TLTQFKAVYTPCQT Trigger: TGTCTGGCATGGCGTGTATACAGCTTTAAATTGGGTTAAAGTCCATATGACTCTAAAGACTGGAAGAAGGAGCTGAAGAGGGTTTACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665339.1 |
||
| CDS GCA 90 bp | TATATGGCTGAGTGTTCTTTAAAATGGAGTATTCTGCTTGCCCTCTaGCACCTTCACAACACCCTAAATCTTTGGAAGAACGTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YMAECSLKWSILLAL*HLHNTLNLWKNVLL Trigger: AAGAAGCACGTTCTTCCAAAGATTTAGGGTGTTGTGAAGGTGGCAGAGGGCAAGCAGAATACTCCATTTTAAAGAACACTCAGCCATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS GCA 90 bp | ATCATGTGCACATGCATGTGCATTTGTGCTGTATTGTCAGTACACTaGTGCAGAACAGATTACCCCACACTCAGTCAATTAAAACAACAC | + |
|
Preference number: 5 (lower is better) Translates to: IMCTCMCICAVLSVH*CRTDYPTLSQLKQH Trigger: GTGTTGTTTTAATTGACTGAGTGTGGGGTAATCTGTTCTGCAGCAGTGTACTGACAATACAGCACAAATGCACATGCATGTGCACATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665339.1 |
||
| CDS CCA 90 bp | AATGTCATAGCAGTCCCTGCCTTAAATATCAATGTCCGAGGAAGGTaGGATGCTGTTTCCAAAAGATTGATTTGCACTTCTGCTAATATA | + |
|
Preference number: 5 (lower is better) Translates to: NVIAVPALNINVRGR*DAVSKRLICTSANI Trigger: TATATTAGCAGAAGTGCAAATCAATCTTTTGGAAACAGCATCCCACCTTCCTCGGACATTGATATTTAAGGCAGGGACTGCTATGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS TCA 90 bp | ATCCCAATCTCAGCTATATCTTCTCACCTCCATTTATGTTGGATTTaGATCTCACTCCCTGCGTTCTCATTTTTCATTTCTTTGCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: IPISAISSHLHLCWI*ISLPAFSFFISLLH Trigger: GTGAAGCAAAGAAATGAAAAATGAGAACGCAGGGAGTGAGATTCAAATCCAACATAAATGGAGGTGAGAAGATATAGCTGAGATTGGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653172.1 |
||
| CDS CCA 72 bp | CTCCGCAGGGAGGGGCGAGGCTGTCCAGGTCGCAGGTaGAGCTGGCCAGCTGCGAGCCAGGATGTCCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LRREGRGCPGRR*SWPAASQDVLA Trigger: AGCAAGGACATCCTGGCTCGCAGCTGGCCAGCTCCACCTGCGACCTGGACAGCCTCGCCCCTCCCTGCGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511661.3 |
||
| CDS CCA 72 bp | TGCTGCAAGAAGCGGAGGCAGCCCTGTGAACTCGCCTaGCTCCGCAGGGAGGGGCGAGGCTGTCCAGGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: CCKKRRQPCELA*LRREGRGCPGR Trigger: GCGACCTGGACAGCCTCGCCCCTCCCTGCGGAGCCAGGCGAGTTCACAGGGCTGCCTCCGCTTCTTGCAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511661.3 |
||
| CDS TCA 72 bp | AGAGCAGACATGCTGCAAGAAGCGGAGGCAGCCCTGTaGACTCGCCTGGCTCCGCAGGGAGGGGCGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RADMLQEAEAAL*TRLAPQGGARL Trigger: CAGCCTCGCCCCTCCCTGCGGAGCCAGGCGAGTTCACAGGGCTGCCTCCGCTTCTTGCAGCATGTCTGCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511661.3 |
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| CDS CCA 72 bp | CCACACCAGGCAGGGCCACGTGGGGTAGCCTCAGGGTaGTCAGGAGGCAGAAAGCAGGGGTACAGGGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PHQAGPRGVASG*SGGRKQGYRES Trigger: GCTTTCCCTGTACCCCTGCTTTCTGCCTCCTGACCACCCTGAGGCTACCCCACGTGGCCCTGCCTGGTGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653172.1 |
||
| CDS CAA 90 bp | GGTTGGGCAGTTTGCGTATCAAAGGCACACTCCCAGCTGAGCCCTTaGCTGTGTCTAAGGATTGGCCAGCCCTGGGAGGGGCAGTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GWAVCVSKAHSQLSP*LCLRIGQPWEGQSD Trigger: GTCTGACTGCCCCTCCCAGGGCTGGCCAATCCTTAGACACAGCAAAGGGCTCAGCTGGGAGTGTGCCTTTGATACGCAAACTGCCCAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653172.1 |
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| CDS TCA 72 bp | TCTCTGTCCACTCTCAGGGCAACTACATCCACACGGTaGAGGCAGGGCCTGTGTAGTGGATGCCAGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLSTLRATTSTR*RQGLCSGCQAV Trigger: GACAGCCTGGCATCCACTACACAGGCCCTGCCTTCACCGTGTGGATGTAGTTGCCCTGAGAGTGGACAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CCA 72 bp | CTCAGATGTCTGGGAAGAGGGATCATCACCCAGGCCTaGGAGCTCTGCGCAGTTTTGTCTGCCTTGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LRCLGRGIITQA*ELCAVLSALAP Trigger: TGGAGCCAAGGCAGACAAAACTGCGCAGAGCTCCCAGGCCTGGGTGATGATCCCTCTTCCCAGACATCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CCA 72 bp | CAGGGTCCTTCCAGCTCCTCCACCAAAACAGTGCCCTaGTTGTCCTCACTTGTCCCATCTTCAGCAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGPSSSSTKTVP*LSSLVPSSAGR Trigger: CCTCCCTGCTGAAGATGGGACAAGTGAGGACAACCAGGGCACTGTTTTGGTGGAGGAGCTGGAAGGACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CAA 72 bp | GTTTGCGTATCAAAGGCACACTCCCAGCTGAGCCCTTaGCTGTGTCTAAGGATTGGCCAGCCCTGGGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VCVSKAHSQLSP*LCLRIGQPWEG Trigger: CCCCTCCCAGGGCTGGCCAATCCTTAGACACAGCAAAGGGCTCAGCTGGGAGTGTGCCTTTGATACGCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653172.1 |
||
| CDS TCA 72 bp | GCCTTGTCCGGCCTGTCCCAGTTTCTCGGGAACCCTTaGGGTTTCTGTCCCTGTTCCACATACTTAGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALSGLSQFLGNP*GFCPCSTYLAP Trigger: TGGGGCTAAGTATGTGGAACAGGGACAGAAACCTCAAGGGTTCCCGAGAAACTGGGACAGGCCGGACAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 72 bp | TCCCTGCTAAGAGTTCCAGGATCAAATTCTTCTAGGTaGCTGCTTGGGTGGGTCCTCATCCCCACCCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLLRVPGSNSSR*LLGWVLIPTPA Trigger: GGCAGGGGTGGGGATGAGGACCCACCCAAGCAGGCACCTAGAAGAATTTGATCCTGGAACTCTTAGCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CCA 72 bp | ACACTCCCAGCTGAGCCCTTTGCTGTGTCTAAGGATTaGCCAGCCCTGGGAGGGGCAGTCAGACAGGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TLPAEPFAVSKD*PALGGAVRQVF Trigger: AAAAACCTGTCTGACTGCCCCTCCCAGGGCTGGCCAATCCTTAGACACAGCAAAGGGCTCAGCTGGGAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653172.1 |
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| CDS CAA 72 bp | ACCCAGGCCTGGGAGCTCTGCGCAGTTTTGTCTGCCTaGGCTCCAAAGTGCTCTTTGCCCTTAACACTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TQAWELCAVLSA*APKCSLPLTLH Trigger: GTGCAGTGTTAAGGGCAAAGAGCACTTTGGAGCCAAGGCAGACAAAACTGCGCAGAGCTCCCAGGCCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CAA 90 bp | GGGATCATCACCCAGGCCTGGGAGCTCTGCGCAGTTTTGTCTGCCTaGGCTCCAAAGTGCTCTTTGCCCTTAACACTGCACCACTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: GIITQAWELCAVLSA*APKCSLPLTLHHCT Trigger: TGTACAGTGGTGCAGTGTTAAGGGCAAAGAGCACTTTGGAGCCAAGGCAGACAAAACTGCGCAGAGCTCCCAGGCCTGGGTGATGATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CAA 90 bp | CATGTGTCTGAACTCAGAGGCTCCAACCAAGAGCAGGGAAGGGCCTaGTGGGAGGTGAGTGCATTTTGGATATGGGGAGCAAGGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HVSELRGSNQEQGRA*WEVSAFWIWGARLV Trigger: CACCAGCCTTGCTCCCCATATCCAAAATGCACTCACCTCCCACAAGGCCCTTCCCTGCTCTTGGTTGGAGCCTCTGAGTTCAGACACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653172.1 ENST00000665339.1 |
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| CDS TCA 72 bp | TGGCTGCCAGCTCTGAAGGTCCTGAGATCCCCATTCTaGGGCCCTTCGCTGACTCACTGCTCTCATTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WLPALKVLRSPF*GPSLTHCSHSS Trigger: AGAAGAATGAGAGCAGTGAGTCAGCGAAGGGCCTCAGAATGGGGATCTCAGGACCTTCAGAGCTGGCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS TCA 72 bp | CGAATGCATGGTAAACATAGGGCCACGGGGAAGTCTTaGCACCGCTCGGCAAGATCTCTCACCGATGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: RMHGKHRATGKS*HRSARSLTDGS Trigger: GGATCCATCGGTGAGAGATCTTGCCGAGCGGTGTCAAGACTTCCCCGTGGCCCTATGTTTACCATGCATTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 72 bp | CATCACCCAGGCCTGGGAGCTCTGCGCAGTTTTGTCTaGCTTGGCTCCAAAGTGCTCTTTGCCCTTAACACT | + |
|
Preference number: 6 (lower is better) Translates to: HHPGLGALRSFV*LGSKVLFALNT Trigger: AGTGTTAAGGGCAAAGAGCACTTTGGAGCCAAGGCAGACAAAACTGCGCAGAGCTCCCAGGCCTGGGTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS GCA 72 bp | TTAAGTGCTGAGTTCCCTAGTGGGAACTCACTGGACTaGAACGCCCCAAGTCCCTCCTTCTCTCTCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSAEFPSGNSLD*NAPSPSFSLCA Trigger: GGCACAGAGAGAGAAGGAGGGACTTGGGGCGTTGCAGTCCAGTGAGTTCCCACTAGGGAACTCAGCACTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 72 bp | GAGGTGAGAAAGGCCCGGACCACACCGAGAATCGAATaGATGGTAAACATAGGGCCACGGGGAAGTCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: EVRKARTTPRIE*MVNIGPRGSLD Trigger: GTCAAGACTTCCCCGTGGCCCTATGTTTACCATGCATTCGATTCTCGGTGTGGTCCGGGCCTTTCTCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 72 bp | CAACCAAGAGCAGGGAAGGGCCTTGTGGGAGGTGAGTaGATTTTGGATATGGGGAGCAAGGCTGGTGGGATT | + |
|
Preference number: 6 (lower is better) Translates to: QPRAGKGLVGGE*ILDMGSKAGGI Trigger: AATCCCACCAGCCTTGCTCCCCATATCCAAAATGCACTCACCTCCCACAAGGCCCTTCCCTGCTCTTGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653172.1 ENST00000665339.1 |
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| CDS CAA 72 bp | ACTCCCAAAACGACGTGGTTTGGAGTCTTGAGAGCCTaGGAAATCGCTGCCCGTGGAGGGAAAGGTCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TPKTTWFGVLRA*EIAARGGKGLE Trigger: CTCCAGACCTTTCCCTCCACGGGCAGCGATTTCCAAGGCTCTCAAGACTCCAAACCACGTCGTTTTGGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000665339.1 |
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| CDS CAA 72 bp | AGGGTCACAAGGCCCTGCAGAGGTGATGCCATGAAGTaGCCTACACAGAACTGCCTCCCTGCTAAGAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RVTRPCRGDAMK*PTQNCLPAKSS Trigger: GGAACTCTTAGCAGGGAGGCAGTTCTGTGTAGGCAACTTCATGGCATCACCTCTGCAGGGCCTTGTGACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CAA 72 bp | AGAGCAGGGAAGGGCCTTGTGGGAGGTGAGTGCATTTaGGATATGGGGAGCAAGGCTGGTGGGATTCTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RAGKGLVGGECI*DMGSKAGGILL Trigger: TAGCAGAATCCCACCAGCCTTGCTCCCCATATCCAAAATGCACTCACCTCCCACAAGGCCCTTCCCTGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653172.1 ENST00000665339.1 |
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| CDS CAA 90 bp | ACCCTGGGTAGGGTCACAAGGCCCTGCAGAGGTGATGCCATGAAGTaGCCTACACAGAACTGCCTCCCTGCTAAGAGTTCCAGGATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: TLGRVTRPCRGDAMK*PTQNCLPAKSSRIK Trigger: TTTGATCCTGGAACTCTTAGCAGGGAGGCAGTTCTGTGTAGGCAACTTCATGGCATCACCTCTGCAGGGCCTTGTGACCCTACCCAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CAA 90 bp | CTCCAACCAAGAGCAGGGAAGGGCCTTGTGGGAGGTGAGTGCATTTaGGATATGGGGAGCAAGGCTGGTGGGATTCTGCTAACGAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: LQPRAGKGLVGGECI*DMGSKAGGILLTKL Trigger: CAGTTTCGTTAGCAGAATCCCACCAGCCTTGCTCCCCATATCCAAAATGCACTCACCTCCCACAAGGCCCTTCCCTGCTCTTGGTTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653172.1 ENST00000665339.1 |
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| CDS TCA 72 bp | GTCTCCACTGCAACGACCCAACTCTCTGGTGTAGCGTaGAAGCAGCCACAGATCATGTGCACATGCATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSTATTQLSGVA*KQPQIMCTCMC Trigger: GCACATGCATGTGCACATGATCTGTGGCTGCTTTCACGCTACACCAGAGAGTTGGGTCGTTGCAGTGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665339.1 |
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| CDS GCA 72 bp | CCTGGCCTTTGGTTGACTAAGGCAGAGGAAAAATGTTaGCTCCTGAGGTGCAGGGGCCACATAGAGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGLWLTKAEEKC*LLRCRGHIEER Trigger: TCTCTCCTCTATGTGGCCCCTGCACCTCAGGAGGCAACATTTTTCCTCTGCCTTAGTCAACCAAAGGCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653172.1 |
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| CDS TCA 72 bp | TTCATGAGAATTGGCAGGAGGTCAAACCGTAGATTCTaGGATGCTCCGGTCGCTCCCCAGGAAGCGCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: FMRIGRRSNRRF*DAPVAPQEALF Trigger: AAACAGCGCTTCCTGGGGAGCGACCGGAGCATCTCAGAATCTACGGTTTGACCTCCTGCCAATTCTCATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511661.3 |
||
| CDS GCA 72 bp | CTCTTAAGCATCCTGGACCATAAAGCCCTAGTGTGCTaGTCCTACCTTGCCAGTAGGACTCCTGTCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLSILDHKALVC*SYLASRTPVSA Trigger: AGCTGAGACAGGAGTCCTACTGGCAAGGTAGGAGCAGCACACTAGGGCTTTATGGTCCAGGATGCTTAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
||
| CDS CCA 72 bp | TCTTTGGAAGAACGTGCTTCTTGTTGGACCTACAAGTaGGGAGCATCTTGCCTTGTCCGGCCTGTCCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SLEERASCWTYK*GASCLVRPVPV Trigger: AACTGGGACAGGCCGGACAAGGCAAGATGCTCCCCACTTGTAGGTCCAACAAGAAGCACGTTCTTCCAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CCA 72 bp | AGAATCCATCTCCTTGGGGTTGTAGGACTGAAGTCCTaGTTTCCCTGCTGCTTGTCATCAGGGCCACACTCA | + |
|
Preference number: 6 (lower is better) Translates to: RIHLLGVVGLKS*FPCCLSSGPHS Trigger: TGAGTGTGGCCCTGATGACAAGCAGCAGGGAAACCAGGACTTCAGTCCTACAACCCCAAGGAGATGGATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665339.1 |
||
| CDS CAA 72 bp | CGGGTGGTCTTTAGTTGCCTGGTTCCTGGCCTTTGGTaGACTAAGGCAGAGGAAAAATGTTGCCTCCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RVVFSCLVPGLW*TKAEEKCCLLR Trigger: CCTCAGGAGGCAACATTTTTCCTCTGCCTTAGTCAACCAAAGGCCAGGAACCAGGCAACTAAAGACCACCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653172.1 |
||
| CDS CAA 90 bp | GTGTGCTTTCACTTTTTCACTCCCAAAACGACGTGGTTTGGAGTCTaGAGAGCCTTGGAAATCGCTGCCCGTGGAGGGAAAGGTCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VCFHFFTPKTTWFGV*RALEIAARGGKGLE Trigger: CTCCAGACCTTTCCCTCCACGGGCAGCGATTTCCAAGGCTCTCAAGACTCCAAACCACGTCGTTTTGGGAGTGAAAAAGTGAAAGCACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000665339.1 |
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| CDS CAA 90 bp | TTAACTATACGGGTGGTCTTTAGTTGCCTGGTTCCTGGCCTTTGGTaGACTAAGGCAGAGGAAAAATGTTGCCTCCTGAGGTGCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LTIRVVFSCLVPGLW*TKAEEKCCLLRCRG Trigger: GCCCCTGCACCTCAGGAGGCAACATTTTTCCTCTGCCTTAGTCAACCAAAGGCCAGGAACCAGGCAACTAAAGACCACCCGTATAGTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653172.1 |
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| CDS TCA 72 bp | ACTTTTTCACTCCCAAAACGACGTGGTTTGGAGTCTTaGGAGCCTTGGAAATCGCTGCCCGTGGAGGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TFSLPKRRGLES*EPWKSLPVEGK Trigger: CTTTCCCTCCACGGGCAGCGATTTCCAAGGCTCTCAAGACTCCAAACCACGTCGTTTTGGGAGTGAAAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000665339.1 |
||
| CDS TCA 72 bp | AACTACCCAGACCCCCACGTTCACAGAATACTAGGATaGGGAGGATCCCAAGGAACACCTGCATCAACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: NYPDPHVHRILG*GGSQGTPASTL Trigger: GAGAGTTGATGCAGGTGTTCCTTGGGATCCTCCTCATCCTAGTATTCTGTGAACGTGGGGGTCTGGGTAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS TCA 72 bp | CTGAGCCTCCAGAAGGAACTGATTCTGCCAGCACCTTaGTTTCAGGCTTCTGGCCTCCAAAACTGTGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSLQKELILPAP*FQASGLQNCER Trigger: TCTCTCACAGTTTTGGAGGCCAGAAGCCTGAAATCAAGGTGCTGGCAGAATCAGTTCCTTCTGGAGGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665339.1 |
||
| CDS GCA 72 bp | GAGCTCTGCGCAGTTTTGTCTGCCTTGGCTCCAAAGTaGTCTTTGCCCTTAACACTGCACCACTGTACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: ELCAVLSALAPK*SLPLTLHHCTD Trigger: ATCTGTACAGTGGTGCAGTGTTAAGGGCAAAGAGCACTTTGGAGCCAAGGCAGACAAAACTGCGCAGAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
||
| CDS GCA 72 bp | CTCTTCTCCATGTGTCCTATGCTCTCGCACTTTTTGTaGTGCTTAGCGTTTTGCCCAGAGGTGTGCCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LFSMCPMLSHFL*CLAFCPEVCQR Trigger: TCTCTGGCACACCTCTGGGCAAAACGCTAAGCAGCACAAAAAGTGCGAGAGCATAGGACACATGGAGAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CCA 72 bp | CTGTACAGATTCACACAGCTGGCACTAGCTCCACAGTaGCTAAGGTTGTGCTGCTTAGGACTGACCAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LYRFTQLALAPQ*LRLCCLGLTKS Trigger: ACTCTTGGTCAGTCCTAAGCAGCACAACCTTAGCCACTGTGGAGCTAGTGCCAGCTGTGTGAATCTGTACAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
||
| CDS CCA 72 bp | CTCAGCATCAGCGTTCAGTTCTCCTTAATTACAGGTTaGCTTGTTTTGTTGCGCAATAGTGCCCCAGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LSISVQFSLITG*LVLLRNSAPAR Trigger: CCGGGCTGGGGCACTATTGCGCAACAAAACAAGCCAACCTGTAATTAAGGAGAACTGAACGCTGATGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CAA 72 bp | CACTTTTTCACTCCCAAAACGACGTGGTTTGGAGTCTaGAGAGCCTTGGAAATCGCTGCCCGTGGAGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: HFFTPKTTWFGV*RALEIAARGGK Trigger: TTTCCCTCCACGGGCAGCGATTTCCAAGGCTCTCAAGACTCCAAACCACGTCGTTTTGGGAGTGAAAAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000665339.1 |
||
| CDS CAA 72 bp | CTTCTCTTCTCCATGTGTCCTATGCTCTCGCACTTTTaGTGCTGCTTAGCGTTTTGCCCAGAGGTGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLFSMCPMLSHF*CCLAFCPEVCQ Trigger: CTGGCACACCTCTGGGCAAAACGCTAAGCAGCACAAAAAGTGCGAGAGCATAGGACACATGGAGAAGAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CAA 90 bp | TTTTTGTGCTGCTTAGCGTTTTGCCCAGAGGTGTGCCAGAGATTATaGCTCATTCTTTCTCCTTCCACGGTCACAACACCTCCCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FLCCLAFCPEVCQRL*LILSPSTVTTPPWA Trigger: AGCCCAGGGAGGTGTTGTGACCGTGGAAGGAGAAAGAATGAGCAATAATCTCTGGCACACCTCTGGGCAAAACGCTAAGCAGCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS GCA 72 bp | GCTGTTTTCGGAAGTGTTGACCCAGCAGCTGGTCCCTaGTGCTCTAATGACACGATGTGTGCTTTCACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: AVFGSVDPAAGP*CSNDTMCAFTF Trigger: AAAAGTGAAAGCACACATCGTGTCATTAGAGCAGCAGGGACCAGCTGCTGGGTCAACACTTCCGAAAACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000665339.1 |
||
| CDS GCA 72 bp | TTTCTCTTAAGCATCCTGGACCATAAAGCCCTAGTGTaGTGCTCCTACCTTGCCAGTAGGACTCCTGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FLLSILDHKALV*CSYLASRTPVS Trigger: TGAGACAGGAGTCCTACTGGCAAGGTAGGAGCAGCACACTAGGGCTTTATGGTCCAGGATGCTTAAGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
||
| CDS CCA 72 bp | CTTGTCCCATCTTCAGCAGGGAGGCACTTGATTCTGTaGCATTTGGCACTGCTCACTGGGCTTTCTTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LVPSSAGRHLIL*HLALLTGLSFL Trigger: AAGAAAAGAAAGCCCAGTGAGCAGTGCCAAATGCCACAGAATCAAGTGCCTCCCTGCTGAAGATGGGACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
||
| CDS CCA 72 bp | CTTGCCCTCTGCCACCTTCACAACACCCTAAATCTTTaGAAGAACGTGCTTCTTGTTGGACCTACAAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LALCHLHNTLNL*KNVLLVGPTSG Trigger: CCCACTTGTAGGTCCAACAAGAAGCACGTTCTTCCAAAGATTTAGGGTGTTGTGAAGGTGGCAGAGGGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CCA 72 bp | ATACGGGTGGTCTTTAGTTGCCTGGTTCCTGGCCTTTaGTTGACTAAGGCAGAGGAAAAATGTTGCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IRVVFSCLVPGL*LTKAEEKCCLL Trigger: CAGGAGGCAACATTTTTCCTCTGCCTTAGTCAACCAAAGGCCAGGAACCAGGCAACTAAAGACCACCCGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653172.1 |
||
| CDS CCA 72 bp | CAAGCTCATTCAGGTTGTTGGAAGAATCCATCTCCTTaGGGTTGTAGGACTGAAGTCCTGGTTTCCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QAHSGCWKNPSP*GCRTEVLVSLL Trigger: CAGCAGGGAAACCAGGACTTCAGTCCTACAACCCCAAGGAGATGGATTCTTCCAACAACCTGAATGAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665339.1 |
||
| CDS CAA 72 bp | TGCGCAGTTTTGTCTGCCTTGGCTCCAAAGTGCTCTTaGCCCTTAACACTGCACCACTGTACAGATTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: CAVLSALAPKCS*PLTLHHCTDSH Trigger: GTGTGAATCTGTACAGTGGTGCAGTGTTAAGGGCAAAGAGCACTTTGGAGCCAAGGCAGACAAAACTGCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
||
| CDS CAA 72 bp | TCACAACACCTCCCTGGGCTGGTGTCACCTCTTACTTaGCAATTCAAAACGTTGAAGAAGGTGCGACCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SQHLPGLVSPLT*QFKTLKKVRPV Trigger: GACAGGTCGCACCTTCTTCAACGTTTTGAATTGCAAAGTAAGAGGTGACACCAGCCCAGGGAGGTGTTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CAA 72 bp | TGTTCACTTAGGTTTTACGCTGCTGACATGAAAGTATaGGCTGGCTGGGCTCTTATCTGGGGGCTTCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: CSLRFYAADMKV*AGWALIWGLPS Trigger: GCTTGGAAGCCCCCAGATAAGAGCCCAGCCAGCCAATACTTTCATGTCAGCAGCGTAAAACCTAAGTGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665339.1 |
||
| CDS CAA 90 bp | GAGTATTCTGCTTGCCCTCTGCCACCTTCACAACACCCTAAATCTTaGGAAGAACGTGCTTCTTGTTGGACCTACAAGTGGGGAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: EYSACPLPPSQHPKS*EERASCWTYKWGAS Trigger: AGATGCTCCCCACTTGTAGGTCCAACAAGAAGCACGTTCTTCCAAAGATTTAGGGTGTTGTGAAGGTGGCAGAGGGCAAGCAGAATACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CAA 90 bp | GAGTCTGCTGCTGTGGGTAAAATACAAACACTCCCATCTCTCCTTTaGAATGTGAGACCGGGCATAATCACAGGACGTTCAGGTGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: ESAAVGKIQTLPSLL*NVRPGIITGRSGDP Trigger: TGGGTCACCTGAACGTCCTGTGATTATGCCCGGTCTCACATTCAAAAGGAGAGATGGGAGTGTTTGTATTTTACCCACAGCAGCAGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS GCA 72 bp | GTTTTCGGAAGTGTTGACCCAGCAGCTGGTCCCTGCTaGTCTAATGACACGATGTGTGCTTTCACTTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VFGSVDPAAGPC*SNDTMCAFTFS Trigger: TGAAAAAGTGAAAGCACACATCGTGTCATTAGAGCAGCAGGGACCAGCTGCTGGGTCAACACTTCCGAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000665339.1 |
||
| CDS GCA 72 bp | TGCAGAGGTGATGCCATGAAGTTGCCTACACAGAACTaGCTCCCTGCTAAGAGTTCCAGGATCAAATTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CRGDAMKLPTQN*LPAKSSRIKFF Trigger: GAAGAATTTGATCCTGGAACTCTTAGCAGGGAGGCAGTTCTGTGTAGGCAACTTCATGGCATCACCTCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
||
| CDS GCA 72 bp | TTCTCCATGTGTCCTATGCTCTCGCACTTTTTGTGCTaGTTAGCGTTTTGCCCAGAGGTGTGCCAGAGATTA | + |
|
Preference number: 6 (lower is better) Translates to: FSMCPMLSHFLC*LAFCPEVCQRL Trigger: TAATCTCTGGCACACCTCTGGGCAAAACGCTAAGCAGCACAAAAAGTGCGAGAGCATAGGACACATGGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CCA 72 bp | GATGTGTGCTTTCACTTTTTCACTCCCAAAACGACGTaGTTTGGAGTCTTGAGAGCCTTGGAAATCGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: DVCFHFFTPKTT*FGVLRALEIAA Trigger: GGCAGCGATTTCCAAGGCTCTCAAGACTCCAAACCACGTCGTTTTGGGAGTGAAAAAGTGAAAGCACACATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506836.5 ENST00000511661.3 ENST00000665339.1 |
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| CDS CCA 72 bp | GAAGTCTTGACACCGCTCGGCAAGATCTCTCACCGATaGATCCACCCTCTATGTTTTCTGATTGGACACATT | + |
|
Preference number: 6 (lower is better) Translates to: EVLTPLGKISHR*IHPLCFLIGHI Trigger: AATGTGTCCAATCAGAAAACATAGAGGGTGGATCCATCGGTGAGAGATCTTGCCGAGCGGTGTCAAGACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS CCA 72 bp | GCCAATCAGTTTTATCACTTGCCATTAGGAGGTCCTTaGGAAGCAATGGGAAAGCTCCCCAGTCCAGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ANQFYHLPLGGP*EAMGKLPSPEK Trigger: TTTCTCTGGACTGGGGAGCTTTCCCATTGCTTCCCAAGGACCTCCTAATGGCAAGTGATAAAACTGATTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653172.1 ENST00000665339.1 |
||
| CDS CCA 72 bp | CTCTTATCTGGGGGCTTCCAAGCTCATTCAGGTTGTTaGAAGAATCCATCTCCTTGGGGTTGTAGGACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLSGGFQAHSGC*KNPSPWGCRTE Trigger: TTCAGTCCTACAACCCCAAGGAGATGGATTCTTCCAACAACCTGAATGAGCTTGGAAGCCCCCAGATAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665339.1 |
||
| CDS CAA 72 bp | CCATCTTCAGCAGGGAGGCACTTGATTCTGTGGCATTaGGCACTGCTCACTGGGCTTTCTTTTCTTTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: PSSAGRHLILWH*ALLTGLSFLFT Trigger: AGTGAAAAGAAAAGAAAGCCCAGTGAGCAGTGCCAAATGCCACAGAATCAAGTGCCTCCCTGCTGAAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
||
| CDS CAA 72 bp | TGCTTAGCGTTTTGCCCAGAGGTGTGCCAGAGATTATaGCTCATTCTTTCTCCTTCCACGGTCACAACACCT | + |
|
Preference number: 6 (lower is better) Translates to: CLAFCPEVCQRL*LILSPSTVTTP Trigger: AGGTGTTGTGACCGTGGAAGGAGAAAGAATGAGCAATAATCTCTGGCACACCTCTGGGCAAAACGCTAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS CAA 72 bp | AGCGTTCAGTTCTCCTTAATTACAGGTTGGCTTGTTTaGTTGCGCAATAGTGCCCCAGCCCGGATGAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: SVQFSLITGWLV*LRNSAPARMNV Trigger: GACATTCATCCGGGCTGGGGCACTATTGCGCAACAAAACAAGCCAACCTGTAATTAAGGAGAACTGAACGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CAA 90 bp | TCACTTGTCCCATCTTCAGCAGGGAGGCACTTGATTCTGTGGCATTaGGCACTGCTCACTGGGCTTTCTTTTCTTTTCACTGTAAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: SLVPSSAGRHLILWH*ALLTGLSFLFTVRL Trigger: GAGTCTTACAGTGAAAAGAAAAGAAAGCCCAGTGAGCAGTGCCAAATGCCACAGAATCAAGTGCCTCCCTGCTGAAGATGGGACAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CAA 90 bp | CTCCATGTGTCCTATGCTCTCGCACTTTTTGTGCTGCTTAGCGTTTaGCCCAGAGGTGTGCCAGAGATTATTGCTCATTCTTTCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LHVSYALALFVLLSV*PRGVPEIIAHSFSF Trigger: GAAGGAGAAAGAATGAGCAATAATCTCTGGCACACCTCTGGGCAAAACGCTAAGCAGCACAAAAAGTGCGAGAGCATAGGACACATGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CAA 90 bp | TGTAGCGTGAAAGCAGCCACAGATCATGTGCACATGCATGTGCATTaGTGCTGTATTGTCAGTACACTGCTGCAGAACAGATTACCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CSVKAATDHVHMHVH*CCIVSTLLQNRLPH Trigger: GTGGGGTAATCTGTTCTGCAGCAGTGTACTGACAATACAGCACAAATGCACATGCATGTGCACATGATCTGTGGCTGCTTTCACGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665339.1 |
||
| CDS CAA 90 bp | CTCAGCATCAGCGTTCAGTTCTCCTTAATTACAGGTTGGCTTGTTTaGTTGCGCAATAGTGCCCCAGCCCGGATGAATGTCATTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSISVQFSLITGWLV*LRNSAPARMNVISF Trigger: AAAGGAAATGACATTCATCCGGGCTGGGGCACTATTGCGCAACAAAACAAGCCAACCTGTAATTAAGGAGAACTGAACGCTGATGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS TCA 72 bp | CTGGCTGCCTATGTAAAGTCTAGGATGCCTGAGTGTTaGCATCCCAATCTCAGCTATATCTTCTCACCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LAAYVKSRMPEC*HPNLSYIFSPP Trigger: TGGAGGTGAGAAGATATAGCTGAGATTGGGATGTCAACACTCAGGCATCCTAGACTTTACATAGGCAGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653172.1 |
||
| CDS TCA 72 bp | TTCACTCACACTCAAAGGGAGGCGATTAAACAAGGATaGGCATCCCTGGGGGACATTTTAGAATTCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: FTHTQREAIKQG*ASLGDILEFCP Trigger: TGGGCAGAATTCTAAAATGTCCCCCAGGGATGCTCATCCTTGTTTAATCGCCTCCCTTTGAGTGTGAGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665339.1 |
||
| CDS GCA 72 bp | CCTATGCTCTCGCACTTTTTGTGCTGCTTAGCGTTTTaGCCAGAGGTGTGCCAGAGATTATTGCTCATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PMLSHFLCCLAF*PEVCQRLLLIL Trigger: AAGAATGAGCAATAATCTCTGGCACACCTCTGGGCAAAACGCTAAGCAGCACAAAAAGTGCGAGAGCATAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS GCA 72 bp | CAGAATACTAGGATGAGGAGGATCCCAAGGAACACCTaGATCAACTCTCATGTTCTACAAGGGAAGAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QNTRMRRIPRNT*INSHVLQGKKP Trigger: TGGCTTCTTCCCTTGTAGAACATGAGAGTTGATGCAGGTGTTCCTTGGGATCCTCCTCATCCTAGTATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS GCA 72 bp | TCATGCCATGAGTTGACTATGACTCTCTCACGCACCTaGCAATCAGTTTTATCACTTGCCATTAGGAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCHELTMTLSRT*QSVLSLAIRRS Trigger: GGACCTCCTAATGGCAAGTGATAAAACTGATTGGCAGGTGCGTGAGAGAGTCATAGTCAACTCATGGCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653172.1 ENST00000665339.1 |
||
| CDS CAA 72 bp | TCCTATGCTCTCGCACTTTTTGTGCTGCTTAGCGTTTaGCCCAGAGGTGTGCCAGAGATTATTGCTCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: SYALALFVLLSV*PRGVPEIIAHS Trigger: AGAATGAGCAATAATCTCTGGCACACCTCTGGGCAAAACGCTAAGCAGCACAAAAAGTGCGAGAGCATAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CAA 72 bp | TCATCACAGGAAGACAAGGAAGCACAGCGACATACTTaGCTGTCTGTGTGTGAACCAATAACAGGGTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSQEDKEAQRHT*LSVCEPITGCG Trigger: ACCACACCCTGTTATTGGTTCACACACAGACAGCAAAGTATGTCGCTGTGCTTCCTTGTCTTCCTGTGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653172.1 |
||
| CDS CAA 72 bp | TGTTTGCTGAGTGTGCCTGGGTGTAAGTCCTGTTTCTaGCAAGCCTTGGGTAAGGCACAAAACCTTCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: CLLSVPGCKSCF*QALGKAQNLHK Trigger: TTTGTGAAGGTTTTGTGCCTTACCCAAGGCTTGCAAGAAACAGGACTTACACCCAGGCACACTCAGCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665339.1 |
||
| CDS CAA 90 bp | AGCATCAGCGTTCAGTTCTCCTTAATTACAGGTTGGCTTGTTTTGTaGCGCAATAGTGCCCCAGCCCGGATGAATGTCATTTCCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SISVQFSLITGWLVL*RNSAPARMNVISFL Trigger: AAGAAAGGAAATGACATTCATCCGGGCTGGGGCACTATTGCGCAACAAAACAAGCCAACCTGTAATTAAGGAGAACTGAACGCTGATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CAA 90 bp | CAGAAGCAATGTTTGCTGAGTGTGCCTGGGTGTAAGTCCTGTTTCTaGCAAGCCTTGGGTAAGGCACAAAACCTTCACAAAATACATCTG | + |
|
Preference number: 6 (lower is better) Translates to: QKQCLLSVPGCKSCF*QALGKAQNLHKIHL Trigger: CAGATGTATTTTGTGAAGGTTTTGTGCCTTACCCAAGGCTTGCAAGAAACAGGACTTACACCCAGGCACACTCAGCAAACATTGCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665339.1 |
||
| CDS TCA 72 bp | TGCGACCTGTCTAGATTTTCGTGTAGCCTTCTCTCCTaGTTGCTGTTTCAGATAACACATTCAGGGTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CDLSRFSCSLLS*LLFQITHSGCW Trigger: CCAACACCCTGAATGTGTTATCTGAAACAGCAATCAGGAGAGAAGGCTACACGAAAATCTAGACAGGTCGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS TCA 72 bp | GGCTGGTGTCACCTCTTACTTTGCAATTCAAAACGTTaGAGAAGGTGCGACCTGTCTAGATTTTCGTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GWCHLLLCNSKR*RRCDLSRFSCS Trigger: GCTACACGAAAATCTAGACAGGTCGCACCTTCTTCAACGTTTTGAATTGCAAAGTAAGAGGTGACACCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CCA 72 bp | CTCTCACCGATGGATCCACCCTCTATGTTTTCTGATTaGACACATTTCCTGAGATGGGAAGGATCATGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: LSPMDPPSMFSD*THFLRWEGSCY Trigger: ATAGCATGATCCTTCCCATCTCAGGAAATGTGTCCAATCAGAAAACATAGAGGGTGGATCCATCGGTGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
||
| CDS CAA 72 bp | GAGAAGCTCAGGAAAACAACACTCACAGGTCCTCCATaGATTGTCCATTTGTGTAAGATGGCACATGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EKLRKTTLTGPP*IVHLCKMAHGS Trigger: TGACCCATGTGCCATCTTACACAAATGGACAATCAATGGAGGACCTGTGAGTGTTGTTTTCCTGAGCTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506836.5 ENST00000511661.3 |
||
| CDS CAA 72 bp | GTTCAGTTCTCCTTAATTACAGGTTGGCTTGTTTTGTaGCGCAATAGTGCCCCAGCCCGGATGAATGTCATT | + |
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Preference number: 6 (lower is better) Translates to: VQFSLITGWLVL*RNSAPARMNVI Trigger: AATGACATTCATCCGGGCTGGGGCACTATTGCGCAACAAAACAAGCCAACCTGTAATTAAGGAGAACTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS CAA 72 bp | GCTGTGGGTAAAATACAAACACTCCCATCTCTCCTTTaGAATGTGAGACCGGGCATAATCACAGGACGTTCA | + |
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Preference number: 6 (lower is better) Translates to: AVGKIQTLPSLL*NVRPGIITGRS Trigger: TGAACGTCCTGTGATTATGCCCGGTCTCACATTCAAAAGGAGAGATGGGAGTGTTTGTATTTTACCCACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS CAA 72 bp | AAAGCAGCCACAGATCATGTGCACATGCATGTGCATTaGTGCTGTATTGTCAGTACACTGCTGCAGAACAGA | + |
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Preference number: 6 (lower is better) Translates to: KAATDHVHMHVH*CCIVSTLLQNR Trigger: TCTGTTCTGCAGCAGTGTACTGACAATACAGCACAAATGCACATGCATGTGCACATGATCTGTGGCTGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665339.1 |
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| CDS CAA 72 bp | AGTGTGCCTGGGTGTAAGTCCTGTTTCTTGCAAGCCTaGGGTAAGGCACAAAACCTTCACAAAATACATCTG | + |
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Preference number: 6 (lower is better) Translates to: SVPGCKSCFLQA*GKAQNLHKIHL Trigger: CAGATGTATTTTGTGAAGGTTTTGTGCCTTACCCAAGGCTTGCAAGAAACAGGACTTACACCCAGGCACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665339.1 |
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| CDS CCA 72 bp | GCAGTCCCTGCCTTAAATATCAATGTCCGAGGAAGGTaGGATGCTGTTTCCAAAAGATTGATTTGCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: AVPALNINVRGR*DAVSKRLICTS Trigger: AGAAGTGCAAATCAATCTTTTGGAAACAGCATCCCACCTTCCTCGGACATTGATATTTAAGGCAGGGACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS CAA 72 bp | TTTGCTGGCGTCACTTCCTCTGGGATATCTTGCTCCTaGTCCTCACTTTCCTCATTTATGTCAATAAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: FAGVTSSGISCS*SSLSSFMSIRS Trigger: TGACCTTATTGACATAAATGAGGAAAGTGAGGACAAGGAGCAAGATATCCCAGAGGAAGTGACGCCAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653172.1 |
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| CDS CAA 72 bp | AGTAGGTCTGCAGTCAGCCTGGTGCCTACTAATTTTTaGGAGCTAATTCAGCTTGACAGAAGCAATGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SRSAVSLVPTNF*ELIQLDRSNVC Trigger: GCAAACATTGCTTCTGTCAAGCTGAATTAGCTCCAAAAAATTAGTAGGCACCAGGCTGACTGCAGACCTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665339.1 |
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| CDS TCA 72 bp | GGCTGGTGGGATTCTGCTAACGAAACTGATCACAGGTaGCAGGGCTCTCCTTTGAACTTGATTATTTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: GWWDSANETDHR*QGSPLNLIIFK Trigger: TTTAAAAATAATCAAGTTCAAAGGAGAGCCCTGTCACCTGTGATCAGTTTCGTTAGCAGAATCCCACCAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000653172.1 ENST00000665339.1 |
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| CDS GCA 72 bp | GAGTGTTCTTTAAAATGGAGTATTCTGCTTGCCCTCTaGCACCTTCACAACACCCTAAATCTTTGGAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: ECSLKWSILLAL*HLHNTLNLWKN Trigger: GTTCTTCCAAAGATTTAGGGTGTTGTGAAGGTGGCAGAGGGCAAGCAGAATACTCCATTTTAAAGAACACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS CCA 72 bp | TCTCTCAAAGACTCAGTAATAAATATTTTAGGCTCATaGGCCATAAGGTCTCCACTGCAACGACCCAACTCT | + |
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Preference number: 6 (lower is better) Translates to: SLKDSVINILGS*AIRSPLQRPNS Trigger: AGAGTTGGGTCGTTGCAGTGGAGACCTTATGGCCCATGAGCCTAAAATATTTATTACTGAGTCTTTGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665339.1 |
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| CDS CAA 72 bp | CCAAAGCAAAAGCACGGTATAATTACAAGGGCCATGTaGCAGTTTAGGTCAATCCAGCGCATGTTATCTGAT | + |
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Preference number: 6 (lower is better) Translates to: PKQKHGIITRAM*QFRSIQRMLSD Trigger: ATCAGATAACATGCGCTGGATTGACCTAAACTGCAACATGGCCCTTGTAATTATACCGTGCTTTTGCTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS CAA 72 bp | TGCTTCACTTTCATTTTTGCTGGCCACTTACCTCCATaGATTGTCCATTTGTGTAAGATGGCACATGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: CFTFIFAGHLPP*IVHLCKMAHGS Trigger: TGACCCATGTGCCATCTTACACAAATGGACAATCAATGGAGGTAAGTGGCCAGCAAAAATGAAAGTGAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653172.1 |
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| CDS TCA 72 bp | CAGTTTAGGTCAATCCAGCGCATGTTATCTGATAAATaGATTCCAAAGCCAAGCGAAACTCTCAGCAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: QFRSIQRMLSDK*IPKPSETLSSL Trigger: AAGACTGCTGAGAGTTTCGCTTGGCTTTGGAATTCATTTATCAGATAACATGCGCTGGATTGACCTAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000511661.3 ENST00000665339.1 |
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| CDS GCA 72 bp | TGCATGTGCATTTGTGCTGTATTGTCAGTACACTGCTaGAGAACAGATTACCCCACACTCAGTCAATTAAAA | + |
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Preference number: 6 (lower is better) Translates to: CMCICAVLSVHC*RTDYPTLSQLK Trigger: TTTTAATTGACTGAGTGTGGGGTAATCTGTTCTGCAGCAGTGTACTGACAATACAGCACAAATGCACATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665339.1 |
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| CDS CCA 72 bp | CCTCTTCAGCTCCTTCTTCCAGTCTTTAGAGTCATATaGACTTTAACCCAATTTAAAGCTGTATACACGCCA | + |
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Preference number: 6 (lower is better) Translates to: PLQLLLPVFRVI*TLTQFKAVYTP Trigger: TGGCGTGTATACAGCTTTAAATTGGGTTAAAGTCCATATGACTCTAAAGACTGGAAGAAGGAGCTGAAGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665339.1 |
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| CDS TCA 72 bp | AGAATTATTTCGATCATTCCAGCTCAGCCGAAACAATaGGAGAACATCAATATGGCAACTCCTCAGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: RIISIIPAQPKQ*ENINMATPQMS Trigger: AGACATCTGAGGAGTTGCCATATTGATGTTCTCTCATTGTTTCGGCTGAGCTGGAATGATCGAAATAATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511661.3 ENST00000653172.1 ENST00000665339.1 |
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| CDS CAA 90 bp | CATCCCAATCTCAGCTATATCTTCTCACCTCCATTTATGTTGGATTaGAATCTCACTCCCTGCGTTCTCATTTTTCATTTCTTTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: HPNLSYIFSPPFMLD*NLTPCVLIFHFFAS Trigger: TGAAGCAAAGAAATGAAAAATGAGAACGCAGGGAGTGAGATTCAAATCCAACATAAATGGAGGTGAGAAGATATAGCTGAGATTGGGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653172.1 |
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| CDS CAA 72 bp | CTCAGCTATATCTTCTCACCTCCATTTATGTTGGATTaGAATCTCACTCCCTGCGTTCTCATTTTTCATTTC | + |
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Preference number: 6 (lower is better) Translates to: LSYIFSPPFMLD*NLTPCVLIFHF Trigger: GAAATGAAAAATGAGAACGCAGGGAGTGAGATTCAAATCCAACATAAATGGAGGTGAGAAGATATAGCTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653172.1 |
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| CDS TCA 72 bp | TCAGCTATATCTTCTCACCTCCATTTATGTTGGATTTaGATCTCACTCCCTGCGTTCTCATTTTTCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: SAISSHLHLCWI*ISLPAFSFFIS Trigger: AGAAATGAAAAATGAGAACGCAGGGAGTGAGATTCAAATCCAACATAAATGGAGGTGAGAAGATATAGCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653172.1 |
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| CDS TCA 72 bp | CCTTGGGTAAGGCACAAAACCTTCACAAAATACATCTaGTATGAGATTACTTCTATGGTTAGAGAACAAGTT | + |
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Preference number: 6 (lower is better) Translates to: PWVRHKTFTKYI*YEITSMVREQV Trigger: AACTTGTTCTCTAACCATAGAAGTAATCTCATATCAGATGTATTTTGTGAAGGTTTTGTGCCTTACCCAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665339.1 |
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| CDS CAA 72 bp | CTATGCCCTGGTAAATTGTTACTCTCCTTTCTAAATTaGAGTGAGCACCCAACATTTAATCTTTTTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: LCPGKLLLSFLN*SEHPTFNLFHF Trigger: AAAGTGAAAAAGATTAAATGTTGGGTGCTCACTCAAATTTAGAAAGGAGAGTAACAATTTACCAGGGCATAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653172.1 |
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