Pregenerated sensors for LINC01946 (Homo sapiens)

Ensembl gene IDs: ENSG00000223647

Ensembl transcript IDs: ENST00000416279.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	ATTAACACAGTGAGTCTATCCAGCAATCCAATTCCAGGGCTCCAGTaGCACAATCTGAATCTGTCTAGGTCCCCGTTGCAGTTTGGCACT	+
Preference number: 5 (lower is better) Translates to: INTVSLSSNPIPGLQ*HNLNLSRSPLQFGT Trigger: AGTGCCAAACTGCAACGGGGACCTAGACAGATTCAGATTGTGCCACTGGAGCCCTGGAATTGGATTGCTGGATAGACTCACTGTGTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416279.1
CDS CCA 72 bp	GTGAGTCTATCCAGCAATCCAATTCCAGGGCTCCAGTaGCACAATCTGAATCTGTCTAGGTCCCCGTTGCAG	+
Preference number: 6 (lower is better) Translates to: VSLSSNPIPGLQ*HNLNLSRSPLQ Trigger: CTGCAACGGGGACCTAGACAGATTCAGATTGTGCCACTGGAGCCCTGGAATTGGATTGCTGGATAGACTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416279.1
CDS TCA 72 bp	CTTAAAAGTGTATTTATTGTTCATGCCACAACCCAGTaGGGGGTAAGCAGCTCTCCTCTAAGTGATGGTTCA	+
Preference number: 6 (lower is better) Translates to: LKSVFIVHATTQ*GVSSSPLSDGS Trigger: TGAACCATCACTTAGAGGAGAGCTGCTTACCCCTCACTGGGTTGTGGCATGAACAATAAATACACTTTTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000416279.1

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