Pregenerated sensors for LINC01944 (Homo sapiens)
Ensembl gene IDs: ENSG00000254299Ensembl transcript IDs: ENST00000517916.2, ENST00000652199.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCCCTGAATGAAGGCGGGAGAAGGGAGCCTGTCTGTGATGTCTCCTaGCCAGGGTCTGGTGGCGGCAGAGACTGGGACTGCAGCCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: ALNEGGRREPVCDVS*PGSGGGRDWDCSPA Trigger: TGCGGGGCTGCAGTCCCAGTCTCTGCCGCCACCAGACCCTGGTCAGGAGACATCACAGACAGGCTCCCTTCTCCCGCCTTCATTCAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS TCA 90 bp | CTGACACCAGACAGCCTGGGAGGGCTGTGGGAGCCAGACTGGGTATaGCTCTGTGGCCTGGGGTCAGATGTCTGCAGCTTCCCAGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LTPDSLGGLWEPDWV*LCGLGSDVCSFPEK Trigger: CTTCTCTGGGAAGCTGCAGACATCTGACCCCAGGCCACAGAGTCATACCCAGTCTGGCTCCCACAGCCCTCCCAGGCTGTCTGGTGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517916.2 ENST00000652199.1 |
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| CDS CCA 90 bp | TCTAGCAATGCCTGCTGCGGCACGAGACCAGAATGGCGGACACGGTaGAGAAAGGCAGCCCTGGTTGAACTCAGCCGCACGGGGCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: SSNACCGTRPEWRTR*RKAALVELSRTGLF Trigger: AAACAGCCCCGTGCGGCTGAGTTCAACCAGGGCTGCCTTTCTCCACCGTGTCCGCCATTCTGGTCTCGTGCCGCAGCAGGCATTGCTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS GCA 90 bp | CAGACGGCCACCTTCTGGCAATGTCCTCACTTGGACTCTTCTCTGTaGATGCATGGAGGGAGGGCAGTGAGTTCTCTGGTGTCTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: QTATFWQCPHLDSSL*MHGGRAVSSLVSLL Trigger: CAGCAGAGACACCAGAGAACTCACTGCCCTCCCTCCATGCATGCACAGAGAAGAGTCCAAGTGAGGACATTGCCAGAAGGTGGCCGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS CCA 90 bp | AAGAAGGAGTCCAGTCTTCCCTGTGGAGCTCATGACAGTATTCCCTaGGAACACAAGCCGCGCAGAGGAGACGCCCCGGGAGTTAACAAA | + |
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Preference number: 5 (lower is better) Translates to: KKESSLPCGAHDSIP*EHKPRRGDAPGVNK Trigger: TTTGTTAACTCCCGGGGCGTCTCCTCTGCGCGGCTTGTGTTCCCAGGGAATACTGTCATGAGCTCCACAGGGAAGACTGGACTCCTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS TCA 90 bp | GCCCTGTCTCCAAATACACTCACCACAGGTGTTAAGGCTTCAGCATaGGTTTGGGGGAGGGGCATAGGCATTCAGTCAGTAAGAAGCACG | + |
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Preference number: 5 (lower is better) Translates to: ALSPNTLTTGVKASA*VWGRGIGIQSVRST Trigger: CGTGCTTCTTACTGACTGAATGCCTATGCCCCTCCCCCAAACTCATGCTGAAGCCTTAACACCTGTGGTGAGTGTATTTGGAGACAGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS GCA 90 bp | GACCTCTCCTCCAACCAAGTAGATAAATGGCCTCGCTCTGTTCAGTaGTTGGCTCGGGTCACAATAAATCAGCTGGCTGTGTATGCATGC | + |
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Preference number: 5 (lower is better) Translates to: DLSSNQVDKWPRSVQ*LARVTINQLAVYAC Trigger: GCATGCATACACAGCCAGCTGATTTATTGTGACCCGAGCCAAGCACTGAACAGAGCGAGGCCATTTATCTACTTGGTTGGAGGAGAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS GCA 90 bp | GTCAGTAAGAAGCACGTATTTGAGTCACGTGCCGGCAACAAGACATaGGAAGTGCTCATTAGCATGGAGCTTATGCTCCTGAGGGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: VSKKHVFESRAGNKT*EVLISMELMLLRGV Trigger: CACACCCCTCAGGAGCATAAGCTCCATGCTAATGAGCACTTCGCATGTCTTGTTGCCGGCACGTGACTCAAATACGTGCTTCTTACTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS CCA 90 bp | ATAGTGCAACGTCTTGAGCTGGAAGGACCAGGTTCATTCATCTCCTaGGTCTGTTACTTCAAAGCTGCGTGTCCTTGGGCTTTCCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: IVQRLELEGPGSFIS*VCYFKAACPWAFPL Trigger: GAGAGGGAAAGCCCAAGGACACGCAGCTTTGAAGTAACAGACCCAGGAGATGAATGAACCTGGTCCTTCCAGCTCAAGACGTTGCACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS GCA 90 bp | GGAAGGACCAGGTTCATTCATCTCCTGGGTCTGTTACTTCAAAGCTaGGTGTCCTTGGGCTTTCCCTCTCTTTATGTCGGCTTCCTTATT | + |
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Preference number: 5 (lower is better) Translates to: GRTRFIHLLGLLLQS*VSLGFPSLYVGFLI Trigger: AATAAGGAAGCCGACATAAAGAGAGGGAAAGCCCAAGGACACGCAGCTTTGAAGTAACAGACCCAGGAGATGAATGAACCTGGTCCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS CCA 90 bp | GGTTCATTCATCTCCTGGGTCTGTTACTTCAAAGCTGCGTGTCCTTaGGCTTTCCCTCTCTTTATGTCGGCTTCCTTATTATGCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: GSFISWVCYFKAACP*AFPLFMSASLLCTR Trigger: CCTGGTGCATAATAAGGAAGCCGACATAAAGAGAGGGAAAGCCCAAGGACACGCAGCTTTGAAGTAACAGACCCAGGAGATGAATGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS TCA 90 bp | ATAAATCAGCTGGCTGTGTATGCATGCACGCTTACTCTCCCAAGCTaGGGCCAGCCTTCCTGTGATAAACCACCAGTATTTATTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: INQLAVYACTLTLPS*GQPSCDKPPVFIPV Trigger: GACTGGAATAAATACTGGTGGTTTATCACAGGAAGGCTGGCCTCAGCTTGGGAGAGTAAGCGTGCATGCATACACAGCCAGCTGATTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS CCA 72 bp | GCCTGCTGCGGCACGAGACCAGAATGGCGGACACGGTaGAGAAAGGCAGCCCTGGTTGAACTCAGCCGCACG | + |
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Preference number: 6 (lower is better) Translates to: ACCGTRPEWRTR*RKAALVELSRT Trigger: CGTGCGGCTGAGTTCAACCAGGGCTGCCTTTCTCCACCGTGTCCGCCATTCTGGTCTCGTGCCGCAGCAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS CCA 72 bp | CTGGTGGCGGCAGAGACTGGGACTGCAGCCCCGCATTaGCAGCAGGTCTTCCACGATGGGGTGTTCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LVAAETGTAAPH*QQVFHDGVFLP Trigger: TGGGAGGAACACCCCATCGTGGAAGACCTGCTGCCAATGCGGGGCTGCAGTCCCAGTCTCTGCCGCCACCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS CAA 72 bp | TCTGGTGGCGGCAGAGACTGGGACTGCAGCCCCGCATaGGCAGCAGGTCTTCCACGATGGGGTGTTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SGGGRDWDCSPA*AAGLPRWGVPP Trigger: GGGAGGAACACCCCATCGTGGAAGACCTGCTGCCAATGCGGGGCTGCAGTCCCAGTCTCTGCCGCCACCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS CCA 72 bp | TCCAGTCTTCCCTGTGGAGCTCATGACAGTATTCCCTaGGAACACAAGCCGCGCAGAGGAGACGCCCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: SSLPCGAHDSIP*EHKPRRGDAPG Trigger: TCCCGGGGCGTCTCCTCTGCGCGGCTTGTGTTCCCAGGGAATACTGTCATGAGCTCCACAGGGAAGACTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS CCA 72 bp | TCATCTAGCAATGCCTGCTGCGGCACGAGACCAGAATaGCGGACACGGTGGAGAAAGGCAGCCCTGGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SSSNACCGTRPE*RTRWRKAALVE Trigger: TTCAACCAGGGCTGCCTTTCTCCACCGTGTCCGCCATTCTGGTCTCGTGCCGCAGCAGGCATTGCTAGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS CAA 72 bp | GCCTCCCCTTTAGTAGCTGTTCCCGGCACAAGGAGTTaGGGTGGTGGGTCCCCGGGAGGACCTATTTATTGT | + |
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Preference number: 6 (lower is better) Translates to: ASPLVAVPGTRS*GGGSPGGPIYC Trigger: ACAATAAATAGGTCCTCCCGGGGACCCACCACCCAAACTCCTTGTGCCGGGAACAGCTACTAAAGGGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517916.2 ENST00000652199.1 |
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| CDS TCA 72 bp | AGAAGCACCTGTAACCTGGGGACAGTGGTCGTTCCTTaGGGCACGCCAGGAGGGGAGAATGAAGCGGAATAT | + |
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Preference number: 6 (lower is better) Translates to: RSTCNLGTVVVP*GTPGGENEAEY Trigger: ATATTCCGCTTCATTCTCCCCTCCTGGCGTGCCTCAAGGAACGACCACTGTCCCCAGGTTACAGGTGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517916.2 ENST00000652199.1 |
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| CDS GCA 72 bp | CTTGGCTCGGGTCACAATAAATCAGCTGGCTGTGTATaGATGCACGCTTACTCTCCCAAGCTGAGGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LGSGHNKSAGCV*MHAYSPKLRPA Trigger: GGCTGGCCTCAGCTTGGGAGAGTAAGCGTGCATGCATACACAGCCAGCTGATTTATTGTGACCCGAGCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS CAA 90 bp | TGCATGCATGGAGGGAGGGCAGTGAGTTCTCTGGTGTCTCTGCTGTaGAAGACACTAATCCTATTGGATCAGGACCCCACCCTCGTGACC | + |
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Preference number: 6 (lower is better) Translates to: CMHGGRAVSSLVSLL*KTLILLDQDPTLVT Trigger: GGTCACGAGGGTGGGGTCCTGATCCAATAGGATTAGTGTCTTCAACAGCAGAGACACCAGAGAACTCACTGCCCTCCCTCCATGCATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS GCA 72 bp | ACCTTCTGGCAATGTCCTCACTTGGACTCTTCTCTGTaGATGCATGGAGGGAGGGCAGTGAGTTCTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: TFWQCPHLDSSL*MHGGRAVSSLV Trigger: CACCAGAGAACTCACTGCCCTCCCTCCATGCATGCACAGAGAAGAGTCCAAGTGAGGACATTGCCAGAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS TCA 72 bp | CAGTGCCTGAGCAGAGTGGTGAATAGTGCAACGTCTTaGGCTGGAAGGACCAGGTTCATTCATCTCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: QCLSRVVNSATS*AGRTRFIHLLG Trigger: ACCCAGGAGATGAATGAACCTGGTCCTTCCAGCTCAAGACGTTGCACTATTCACCACTCTGCTCAGGCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS CCA 72 bp | CCCTTTAGTAGCTGTTCCCGGCACAAGGAGTTTGGGTaGTGGGTCCCCGGGAGGACCTATTTATTGTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: PFSSCSRHKEFG*WVPGRTYLLLV Trigger: TACTAACAATAAATAGGTCCTCCCGGGGACCCACCACCCAAACTCCTTGTGCCGGGAACAGCTACTAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517916.2 ENST00000652199.1 |
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| CDS CCA 72 bp | CGTCTTGAGCTGGAAGGACCAGGTTCATTCATCTCCTaGGTCTGTTACTTCAAAGCTGCGTGTCCTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RLELEGPGSFIS*VCYFKAACPWA Trigger: AGCCCAAGGACACGCAGCTTTGAAGTAACAGACCCAGGAGATGAATGAACCTGGTCCTTCCAGCTCAAGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS CAA 90 bp | CTCTCCTCCAACCAAGTAGATAAATGGCCTCGCTCTGTTCAGTGCTaGGCTCGGGTCACAATAAATCAGCTGGCTGTGTATGCATGCACG | + |
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Preference number: 6 (lower is better) Translates to: LSSNQVDKWPRSVQC*ARVTINQLAVYACT Trigger: CGTGCATGCATACACAGCCAGCTGATTTATTGTGACCCGAGCCAAGCACTGAACAGAGCGAGGCCATTTATCTACTTGGTTGGAGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS CAA 90 bp | GTTTGGGGGAGGGGCATAGGCATTCAGTCAGTAAGAAGCACGTATTaGAGTCACGTGCCGGCAACAAGACATGCGAAGTGCTCATTAGCA | + |
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Preference number: 6 (lower is better) Translates to: VWGRGIGIQSVRSTY*SHVPATRHAKCSLA Trigger: TGCTAATGAGCACTTCGCATGTCTTGTTGCCGGCACGTGACTCAAATACGTGCTTCTTACTGACTGAATGCCTATGCCCCTCCCCCAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS TCA 72 bp | CTGGCTGTGTATGCATGCACGCTTACTCTCCCAAGCTaGGGCCAGCCTTCCTGTGATAAACCACCAGTATTT | + |
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Preference number: 6 (lower is better) Translates to: LAVYACTLTLPS*GQPSCDKPPVF Trigger: AAATACTGGTGGTTTATCACAGGAAGGCTGGCCTCAGCTTGGGAGAGTAAGCGTGCATGCATACACAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS CAA 72 bp | AGGGGCATAGGCATTCAGTCAGTAAGAAGCACGTATTaGAGTCACGTGCCGGCAACAAGACATGCGAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: RGIGIQSVRSTY*SHVPATRHAKC Trigger: GCACTTCGCATGTCTTGTTGCCGGCACGTGACTCAAATACGTGCTTCTTACTGACTGAATGCCTATGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS CAA 90 bp | GCAGTGAGTTCTCTGGTGTCTCTGCTGTTGAAGACACTAATCCTATaGGATCAGGACCCCACCCTCGTGACCTCATTCAACCTTACCTAC | + |
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Preference number: 6 (lower is better) Translates to: AVSSLVSLLLKTLIL*DQDPTLVTSFNLTY Trigger: GTAGGTAAGGTTGAATGAGGTCACGAGGGTGGGGTCCTGATCCAATAGGATTAGTGTCTTCAACAGCAGAGACACCAGAGAACTCACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS TCA 72 bp | CCAAATACACTCACCACAGGTGTTAAGGCTTCAGCATaGGTTTGGGGGAGGGGCATAGGCATTCAGTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: PNTLTTGVKASA*VWGRGIGIQSV Trigger: TACTGACTGAATGCCTATGCCCCTCCCCCAAACTCATGCTGAAGCCTTAACACCTGTGGTGAGTGTATTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS GCA 72 bp | TCCAACCAAGTAGATAAATGGCCTCGCTCTGTTCAGTaGTTGGCTCGGGTCACAATAAATCAGCTGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SNQVDKWPRSVQ*LARVTINQLAV Trigger: CACAGCCAGCTGATTTATTGTGACCCGAGCCAAGCACTGAACAGAGCGAGGCCATTTATCTACTTGGTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS GCA 72 bp | AAGCACGTATTTGAGTCACGTGCCGGCAACAAGACATaGGAAGTGCTCATTAGCATGGAGCTTATGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: KHVFESRAGNKT*EVLISMELMLL Trigger: CAGGAGCATAAGCTCCATGCTAATGAGCACTTCGCATGTCTTGTTGCCGGCACGTGACTCAAATACGTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS CAA 72 bp | GGTCAGATGTCTGCAGCTTCCCAGAGAAGAACACACTaGATTGAGCCTTGTTGGGGTGAAGAAGCACCTGTA | + |
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Preference number: 6 (lower is better) Translates to: GQMSAASQRRTH*IEPCWGEEAPV Trigger: TACAGGTGCTTCTTCACCCCAACAAGGCTCAATCAAGTGTGTTCTTCTCTGGGAAGCTGCAGACATCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517916.2 ENST00000652199.1 |
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| CDS CCA 72 bp | AGTCAGCTCCGGCTGTCACCACCAATTACCACGGACTaGGTGGCTCAAACAACAGAAATGTATTTTTGCACA | + |
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Preference number: 6 (lower is better) Translates to: SQLRLSPPITTD*VAQTTEMYFCT Trigger: TGTGCAAAAATACATTTCTGTTGTTTGAGCCACCCAGTCCGTGGTAATTGGTGGTGACAGCCGGAGCTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS CAA 90 bp | AGGTTCATTCATCTCCTGGGTCTGTTACTTCAAAGCTGCGTGTCCTaGGGCTTTCCCTCTCTTTATGTCGGCTTCCTTATTATGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: RFIHLLGLLLQSCVS*GFPSLYVGFLIMHQ Trigger: CTGGTGCATAATAAGGAAGCCGACATAAAGAGAGGGAAAGCCCAAGGACACGCAGCTTTGAAGTAACAGACCCAGGAGATGAATGAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS CAA 90 bp | ACCAATTACCACGGACTGGGTGGCTCAAACAACAGAAATGTATTTTaGCACAGTTCTGAAGGCTGGAAGTCTCAGGTCAAGGTCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: TNYHGLGGSNNRNVF*HSSEGWKSQVKVWA Trigger: AGCCCAGACCTTGACCTGAGACTTCCAGCCTTCAGAACTGTGCAAAAATACATTTCTGTTGTTTGAGCCACCCAGTCCGTGGTAATTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS CAA 72 bp | AACCAAGTAGATAAATGGCCTCGCTCTGTTCAGTGCTaGGCTCGGGTCACAATAAATCAGCTGGCTGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: NQVDKWPRSVQC*ARVTINQLAVY Trigger: ATACACAGCCAGCTGATTTATTGTGACCCGAGCCAAGCACTGAACAGAGCGAGGCCATTTATCTACTTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517916.2 |
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| CDS GCA 72 bp | TGGGCTTTCCCTCTCTTTATGTCGGCTTCCTTATTATaGACCAGGAGTTGTTCCAAGATCCCAATTAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: WAFPLFMSASLL*TRSCSKIPISS Trigger: ACTGCTAATTGGGATCTTGGAACAACTCCTGGTGCATAATAAGGAAGCCGACATAAAGAGAGGGAAAGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS CAA 72 bp | CACCAAACTAGATCTGTGCAGCACAACAAAAATGTATaGAGCACTGTATTAGTCAGCTCCGGCTGTCACCAC | + |
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Preference number: 6 (lower is better) Translates to: HQTRSVQHNKNV*STVLVSSGCHH Trigger: GTGGTGACAGCCGGAGCTGACTAATACAGTGCTCAATACATTTTTGTTGTGCTGCACAGATCTAGTTTGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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| CDS CAA 90 bp | AATAGTGTGCACCAAACTAGATCTGTGCAGCACAACAAAAATGTATaGAGCACTGTATTAGTCAGCTCCGGCTGTCACCACCAATTACCA | + |
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Preference number: 6 (lower is better) Translates to: NSVHQTRSVQHNKNV*STVLVSSGCHHQLP Trigger: TGGTAATTGGTGGTGACAGCCGGAGCTGACTAATACAGTGCTCAATACATTTTTGTTGTGCTGCACAGATCTAGTTTGGTGCACACTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652199.1 |
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