Pregenerated sensors for LINC01937 (Homo sapiens)
Ensembl gene IDs: ENSG00000234279Ensembl transcript IDs: ENST00000448543.1, ENST00000653335.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACGCCTCATCCAGGGCTCTGGGAACCGCTGTGGGAAAGTCTCTTCTaGGTGCCTGTGCCCCCGGGCAGCTGGAAGGCGGTTCCGCACCAG | + |
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Preference number: 5 (lower is better) Translates to: TPHPGLWEPLWESLF*VPVPPGSWKAVPHQ Trigger: CTGGTGCGGAACCGCCTTCCAGCTGCCCGGGGGCACAGGCACGCAGAAGAGACTTTCCCACAGCGGTTCCCAGAGCCCTGGATGAGGCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653335.1 |
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| CDS CCA 90 bp | CCGCTGTGGGAAAGTCTCTTCTGCGTGCCTGTGCCCCCGGGCAGCTaGAAGGCGGTTCCGCACCAGACACCGAAGCTGCTGGGCCTTCGA | + |
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Preference number: 5 (lower is better) Translates to: PLWESLFCVPVPPGS*KAVPHQTPKLLGLR Trigger: TCGAAGGCCCAGCAGCTTCGGTGTCTGGTGCGGAACCGCCTTCCAGCTGCCCGGGGGCACAGGCACGCAGAAGAGACTTTCCCACAGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653335.1 |
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| CDS GCA 90 bp | CTCATCCAGGGCTCTGGGAACCGCTGTGGGAAAGTCTCTTCTGCGTaGCTGTGCCCCCGGGCAGCTGGAAGGCGGTTCCGCACCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: LIQGSGNRCGKVSSA*LCPRAAGRRFRTRH Trigger: GTGTCTGGTGCGGAACCGCCTTCCAGCTGCCCGGGGGCACAGGCACGCAGAAGAGACTTTCCCACAGCGGTTCCCAGAGCCCTGGATGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653335.1 |
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| CDS CCA 90 bp | ATAATCCTTTGGAGGACGCCTCATCCAGGGCTCTGGGAACCGCTGTaGGAAAGTCTCTTCTGCGTGCCTGTGCCCCCGGGCAGCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: IILWRTPHPGLWEPL*ESLFCVPVPPGSWK Trigger: CTTCCAGCTGCCCGGGGGCACAGGCACGCAGAAGAGACTTTCCCACAGCGGTTCCCAGAGCCCTGGATGAGGCGTCCTCCAAAGGATTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653335.1 |
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| CDS GCA 90 bp | ATGTTTGCCATTCTAGTGGATGGGAATGTGGTGTCCACACGCACGTaGCTGAGGCCCTCTGGGCACAAGACAAGGTCTTGTGGCAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: MFAILVDGNVVSTRT*LRPSGHKTRSCGRK Trigger: TTTCCTGCCACAAGACCTTGTCTTGTGCCCAGAGGGCCTCAGGCACGTGCGTGTGGACACCACATTCCCATCCACTAGAATGGCAAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448543.1 ENST00000653335.1 |
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| CDS CCA 90 bp | TTTGGGAGAGACAAGTATCTGCAGAAACTTGGTGACATAATCCTTTaGAGGACGCCTCATCCAGGGCTCTGGGAACCGCTGTGGGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FGRDKYLQKLGDIIL*RTPHPGLWEPLWES Trigger: ACTTTCCCACAGCGGTTCCCAGAGCCCTGGATGAGGCGTCCTCCAAAGGATTATGTCACCAAGTTTCTGCAGATACTTGTCTCTCCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653335.1 |
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| CDS GCA 72 bp | GGCTCTGGGAACCGCTGTGGGAAAGTCTCTTCTGCGTaGCTGTGCCCCCGGGCAGCTGGAAGGCGGTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: GSGNRCGKVSSA*LCPRAAGRRFR Trigger: GCGGAACCGCCTTCCAGCTGCCCGGGGGCACAGGCACGCAGAAGAGACTTTCCCACAGCGGTTCCCAGAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653335.1 |
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| CDS CCA 72 bp | TGGAGGACGCCTCATCCAGGGCTCTGGGAACCGCTGTaGGAAAGTCTCTTCTGCGTGCCTGTGCCCCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: WRTPHPGLWEPL*ESLFCVPVPPG Trigger: GCCCGGGGGCACAGGCACGCAGAAGAGACTTTCCCACAGCGGTTCCCAGAGCCCTGGATGAGGCGTCCTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653335.1 |
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| CDS CCA 72 bp | GAAAGTCTCTTCTGCGTGCCTGTGCCCCCGGGCAGCTaGAAGGCGGTTCCGCACCAGACACCGAAGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: ESLFCVPVPPGS*KAVPHQTPKLL Trigger: CAGCAGCTTCGGTGTCTGGTGCGGAACCGCCTTCCAGCTGCCCGGGGGCACAGGCACGCAGAAGAGACTTTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653335.1 |
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| CDS CAA 72 bp | CAAGTATCCTGCACCGTGAGAAGGCTTCATCAGCCGTaGTCCCCAGCAACCTCCACTGCTGATGGGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: QVSCTVRRLHQP*SPATSTADGSS Trigger: AGAAGACCCATCAGCAGTGGAGGTTGCTGGGGACAACGGCTGATGAAGCCTTCTCACGGTGCAGGATACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448543.1 |
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| CDS CAA 90 bp | TGGGAGAGACAAGTATCCTGCACCGTGAGAAGGCTTCATCAGCCGTaGTCCCCAGCAACCTCCACTGCTGATGGGTCTTCTACGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: WERQVSCTVRRLHQP*SPATSTADGSSTLH Trigger: ATGAAGCGTAGAAGACCCATCAGCAGTGGAGGTTGCTGGGGACAACGGCTGATGAAGCCTTCTCACGGTGCAGGATACTTGTCTCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448543.1 |
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| CDS CCA 72 bp | GACAAGTATCTGCAGAAACTTGGTGACATAATCCTTTaGAGGACGCCTCATCCAGGGCTCTGGGAACCGCTG | + |
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Preference number: 6 (lower is better) Translates to: DKYLQKLGDIIL*RTPHPGLWEPL Trigger: CAGCGGTTCCCAGAGCCCTGGATGAGGCGTCCTCCAAAGGATTATGTCACCAAGTTTCTGCAGATACTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653335.1 |
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| CDS TCA 72 bp | TTGGTTTGGGAGAGACAAGTATCTGCAGAAACTTGGTaGCATAATCCTTTGGAGGACGCCTCATCCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LVWERQVSAETW*HNPLEDASSRA Trigger: AGCCCTGGATGAGGCGTCCTCCAAAGGATTATGTCACCAAGTTTCTGCAGATACTTGTCTCTCCCAAACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653335.1 |
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| CDS CAA 90 bp | CTCATTAGAAATTGCCATACTGTTTTCCAAAGCGACTGTGCCATTTaGCATCCCCACCGGCAGTGTCTAAGGGTTTCAATTGCTTCACGT | + |
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Preference number: 6 (lower is better) Translates to: LIRNCHTVFQSDCAI*HPHRQCLRVSIASR Trigger: ACGTGAAGCAATTGAAACCCTTAGACACTGCCGGTGGGGATGCAAAATGGCACAGTCGCTTTGGAAAACAGTATGGCAATTTCTAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000448543.1 ENST00000653335.1 |
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| CDS GCA 72 bp | TTAATAGACTGGCAGGAGGGCTTCTATTTGAACACTTaGCTCAGGCCCCCAAATGGTAAAAGCAGAACTGTT | + |
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Preference number: 6 (lower is better) Translates to: LIDWQEGFYLNT*LRPPNGKSRTV Trigger: AACAGTTCTGCTTTTACCATTTGGGGGCCTGAGGCAAGTGTTCAAATAGAAGCCCTCCTGCCAGTCTATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448543.1 ENST00000653335.1 |
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| CDS CCA 72 bp | AGGAGTGGGATTGCTGGATCACATGGTAGCTGCATGTaGGACCTCATTAGAAATTGCCATACTGTTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: RSGIAGSHGSCM*DLIRNCHTVFQ Trigger: TTGGAAAACAGTATGGCAATTTCTAATGAGGTCCCACATGCAGCTACCATGTGATCCAGCAATCCCACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653335.1 |
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| CDS GCA 72 bp | TCACATGGTAGCTGCATGTGGGACCTCATTAGAAATTaGCATACTGTTTTCCAAAGCGACTGTGCCATTTTG | + |
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Preference number: 6 (lower is better) Translates to: SHGSCMWDLIRN*HTVFQSDCAIL Trigger: CAAAATGGCACAGTCGCTTTGGAAAACAGTATGGCAATTTCTAATGAGGTCCCACATGCAGCTACCATGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653335.1 |
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