Pregenerated sensors for LINC01936 (Homo sapiens)
Ensembl gene IDs: ENSG00000235997Ensembl transcript IDs: ENST00000421976.2, ENST00000660932.1, ENST00000666899.1, ENST00000670470.1, ENST00000671597.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCTGGTAAACCAGATCCCCACGGCCTCAGCCGCTCTTCATCGGCCTaGCTTGGGCTTCCAGAGCCTGCCCAGCCCACGTGGGGCTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: PGKPDPHGLSRSSSA*LGLPEPAQPTWGWF Trigger: AAACCAGCCCCACGTGGGCTGGGCAGGCTCTGGAAGCCCAAGTCAGGCCGATGAAGAGCGGCTGAGGCCGTGGGGATCTGGTTTACCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS GCA 90 bp | CGGCCTCAGCCGCTCTTCATCGGCCTGACTTGGGCTTCCAGAGCCTaGCCAGCCCACGTGGGGCTGGTTTGGCAAAAACTGGGCTCTAGA | + |
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Preference number: 5 (lower is better) Translates to: RPQPLFIGLTWASRA*PAHVGLVWQKLGSR Trigger: TCTAGAGCCCAGTTTTTGCCAAACCAGCCCCACGTGGGCTGGGCAGGCTCTGGAAGCCCAAGTCAGGCCGATGAAGAGCGGCTGAGGCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS CCA 90 bp | GCTCAAGCCAGGCGGCGTCACCGCTCACTGCAGGCTGTTCCCACGTaGTCAGGCGCAGGGTCTTTCTGCCTCATCACTGAAGTGGGGACT | + |
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Preference number: 5 (lower is better) Translates to: AQARRRHRSLQAVPT*SGAGSFCLITEVGT Trigger: AGTCCCCACTTCAGTGATGAGGCAGAAAGACCCTGCGCCTGACCACGTGGGAACAGCCTGCAGTGAGCGGTGACGCCGCCTGGCTTGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS TCA 90 bp | ACTGGCAGGCTGGAGGCTGTTCTGGGGAGGACGCACTGTGTCCCATaGCTCTCCAGTCTCCTCGGAGCTGCTGAGCTTCCTGGCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: TGRLEAVLGRTHCVP*LSSLLGAAELPGRK Trigger: CTTCCTGCCAGGAAGCTCAGCAGCTCCGAGGAGACTGGAGAGTCATGGGACACAGTGCGTCCTCCCCAGAACAGCCTCCAGCCTGCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS CCA 90 bp | CTGCCTCCAAGCGTGTGCTCTGAACTGGCAGGCTGGAGGCTGTTCTaGGGAGGACGCACTGTGTCCCATGACTCTCCAGTCTCCTCGGAG | + |
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Preference number: 5 (lower is better) Translates to: LPPSVCSELAGWRLF*GGRTVSHDSPVSSE Trigger: CTCCGAGGAGACTGGAGAGTCATGGGACACAGTGCGTCCTCCCCAGAACAGCCTCCAGCCTGCCAGTTCAGAGCACACGCTTGGAGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS CCA 90 bp | CCCATCCTCCTGCACCACGGGCACCAGCTTCCATACAAGTGGCCCTaGAGTCCTGACTCCCAGCTGTCAGCACCAGCAATCCTTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PILLHHGHQLPYKWP*SPDSQLSAPAILLR Trigger: CCTGAGAAGGATTGCTGGTGCTGACAGCTGGGAGTCAGGACTCCAGGGCCACTTGTATGGAAGCTGGTGCCCGTGGTGCAGGAGGATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS CCA 90 bp | ACCTCAGCCTTCCTGCCTCCAAGCGTGTGCTCTGAACTGGCAGGCTaGAGGCTGTTCTGGGGAGGACGCACTGTGTCCCATGACTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: TSAFLPPSVCSELAG*RLFWGGRTVSHDSP Trigger: TGGAGAGTCATGGGACACAGTGCGTCCTCCCCAGAACAGCCTCCAGCCTGCCAGTTCAGAGCACACGCTTGGAGGCAGGAAGGCTGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS TCA 90 bp | CCTGCACCACGGGCACCAGCTTCCATACAAGTGGCCCTGGAGTCCTaGCTCCCAGCTGTCAGCACCAGCAATCCTTCTCAGGAGCTAAGC | + |
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Preference number: 5 (lower is better) Translates to: PAPRAPASIQVALES*LPAVSTSNPSQELS Trigger: GCTTAGCTCCTGAGAAGGATTGCTGGTGCTGACAGCTGGGAGTCAGGACTCCAGGGCCACTTGTATGGAAGCTGGTGCCCGTGGTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS CCA 90 bp | ACCCCTTACCTCTCCTCTCTCTGTCTGGTTGCAGAGGCTGGTGTGTaGAGGGTGTGGTGGCGGATTCCACAGGTGCACACATCTGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: TPYLSSLCLVAEAGV*RVWWRIPQVHTSGS Trigger: GCTCCCAGATGTGTGCACCTGTGGAATCCGCCACCACACCCTCCACACACCAGCCTCTGCAACCAGACAGAGAGAGGAGAGGTAAGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CCA 90 bp | CTCTCCTCTCTCTGTCTGGTTGCAGAGGCTGGTGTGTGGAGGGTGTaGTGGCGGATTCCACAGGTGCACACATCTGGGAGCTTCTGGACT | + |
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Preference number: 5 (lower is better) Translates to: LSSLCLVAEAGVWRV*WRIPQVHTSGSFWT Trigger: AGTCCAGAAGCTCCCAGATGTGTGCACCTGTGGAATCCGCCACCACACCCTCCACACACCAGCCTCTGCAACCAGACAGAGAGAGGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS GCA 90 bp | TTGCAGAGGCTGGTGTGTGGAGGGTGTGGTGGCGGATTCCACAGGTaGACACATCTGGGAGCTTCTGGACTCCTAAGTCCTTGCCACACT | + |
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Preference number: 5 (lower is better) Translates to: LQRLVCGGCGGGFHR*THLGASGLLSPCHT Trigger: AGTGTGGCAAGGACTTAGGAGTCCAGAAGCTCCCAGATGTGTGCACCTGTGGAATCCGCCACCACACCCTCCACACACCAGCCTCTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS TCA 90 bp | ACCCCCGCTTTACAGGTGAGAAGACTGCGGCTCAGAGAAGCCGAATaGCTTGTCCACAGCTCTCAGCTGGCCCATAGCAGGAATGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: TPALQVRRLRLREAE*LVHSSQLAHSRNGV Trigger: AACCCCATTCCTGCTATGGGCCAGCTGAGAGCTGTGGACAAGTCATTCGGCTTCTCTGAGCCGCAGTCTTCTCACCTGTAAAGCGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS CCA 90 bp | AGCCAGGGGCTTGGTGGACGAAGACACAATGTCTGCTTCCAGGAATaGACGGCCAAGCTTCTGGGTTTACCGGCTCTTGCAGATTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: SQGLGGRRHNVCFQE*TAKLLGLPALADSP Trigger: CGGAGAATCTGCAAGAGCCGGTAAACCCAGAAGCTTGGCCGTCCATTCCTGGAAGCAGACATTGTGTCTTCGTCCACCAAGCCCCTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 ENST00000671597.1 |
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| CDS TCA 90 bp | GGCTGTTCCCACGTGGTCAGGCGCAGGGTCTTTCTGCCTCATCACTaGAGTGGGGACTTGAATACGGCTCTTCCTTTTCTTGCATCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GCSHVVRRRVFLPHH*SGDLNTALPFLASS Trigger: GGAGGATGCAAGAAAAGGAAGAGCCGTATTCAAGTCCCCACTTCAGTGATGAGGCAGAAAGACCCTGCGCCTGACCACGTGGGAACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS GCA 90 bp | AATCAATCACATCCTCACCCCTTACCTCTCCTCTCTCTGTCTGGTTaGAGAGGCTGGTGTGTGGAGGGTGTGGTGGCGGATTCCACAGGT | + |
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Preference number: 5 (lower is better) Translates to: NQSHPHPLPLLSLSG*RGWCVEGVVADSTG Trigger: ACCTGTGGAATCCGCCACCACACCCTCCACACACCAGCCTCTGCAACCAGACAGAGAGAGGAGAGGTAAGGGGTGAGGATGTGATTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS TCA 90 bp | TGGTCAGGCGCAGGGTCTTTCTGCCTCATCACTGAAGTGGGGACTTaGATACGGCTCTTCCTTTTCTTGCATCCTCCATGTGCCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: WSGAGSFCLITEVGT*IRLFLFLHPPCALL Trigger: CAGGAGGGCACATGGAGGATGCAAGAAAAGGAAGAGCCGTATTCAAGTCCCCACTTCAGTGATGAGGCAGAAAGACCCTGCGCCTGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS TCA 90 bp | CTGTGTAGGGTCAAGGTGCCATGTTCTTGCCACCACAGTGAGTGTTaGGAGCCAGGGGCTTGGTGGACGAAGACACAATGTCTGCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LCRVKVPCSCHHSEC*EPGAWWTKTQCLLP Trigger: TGGAAGCAGACATTGTGTCTTCGTCCACCAAGCCCCTGGCTCTCAACACTCACTGTGGTGGCAAGAACATGGCACCTTGACCCTACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 ENST00000671597.1 |
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| CDS GCA 90 bp | CTGCTTCCAGGAATGGACGGCCAAGCTTCTGGGTTTACCGGCTCTTaGAGATTCTCCGGTGAGGCCACTGGATGTTTCAGGAAACACATG | + |
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Preference number: 5 (lower is better) Translates to: LLPGMDGQASGFTGS*RFSGEATGCFRKHM Trigger: CATGTGTTTCCTGAAACATCCAGTGGCCTCACCGGAGAATCTGCAAGAGCCGGTAAACCCAGAAGCTTGGCCGTCCATTCCTGGAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 ENST00000671597.1 |
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| CDS CCA 90 bp | CCTCAGACGGAAGAGGAGCGTTTCACTGCAAACCGAGAGGAGGCTTaGTGCCTTTCCAGCACTTCCGTGGCTGCTTCTGAAAAATGGAAG | + |
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Preference number: 5 (lower is better) Translates to: PQTEEERFTANREEA*CLSSTSVAASEKWK Trigger: CTTCCATTTTTCAGAAGCAGCCACGGAAGTGCTGGAAAGGCACCAAGCCTCCTCTCGGTTTGCAGTGAAACGCTCCTCTTCCGTCTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660932.1 |
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| CDS TCA 90 bp | GGACGGCCAAGCTTCTGGGTTTACCGGCTCTTGCAGATTCTCCGGTaGGGCCACTGGATGTTTCAGGAAACACATGGCTCATTCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GRPSFWVYRLLQILR*GHWMFQETHGSFSS Trigger: AGAAGAGAATGAGCCATGTGTTTCCTGAAACATCCAGTGGCCTCACCGGAGAATCTGCAAGAGCCGGTAAACCCAGAAGCTTGGCCGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 ENST00000671597.1 |
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| CDS GCA 90 bp | GACCATGTGGATGGGAGGCAGGATGTAGGAGAGTGGATTAGTCAATaGCTAGAACAGGATGCTGGGCAGGTCCCTAGTGACTTCCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: DHVDGRQDVGEWISQ*LEQDAGQVPSDFQS Trigger: AGACTGGAAGTCACTAGGGACCTGCCCAGCATCCTGTTCTAGGCATTGACTAATCCACTCTCCTACATCCTGCCTCCCATCCACATGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CCA 90 bp | TTCCCACGTGGTCAGGCGCAGGGTCTTTCTGCCTCATCACTGAAGTaGGGACTTGAATACGGCTCTTCCTTTTCTTGCATCCTCCATGTG | + |
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Preference number: 5 (lower is better) Translates to: FPRGQAQGLSASSLK*GLEYGSSFSCILHV Trigger: CACATGGAGGATGCAAGAAAAGGAAGAGCCGTATTCAAGTCCCCACTTCAGTGATGAGGCAGAAAGACCCTGCGCCTGACCACGTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS CCA 90 bp | TGGCCTTTGTTTTCTTTGGCAGCCTCCTCCTTGGAGGGCCGAGGATaGAAATCAATCACATCCTCACCCCTTACCTCTCCTCTCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: WPLFSLAASSLEGRG*KSITSSPLTSPLSV Trigger: GACAGAGAGAGGAGAGGTAAGGGGTGAGGATGTGATTGATTTCCATCCTCGGCCCTCCAAGGAGGAGGCTGCCAAAGAAAACAAAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CCA 90 bp | AGGGTGTGGTGGCGGATTCCACAGGTGCACACATCTGGGAGCTTCTaGACTCCTAAGTCCTTGCCACACTATGTTACATGCCTTTCCATT | + |
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Preference number: 5 (lower is better) Translates to: RVWWRIPQVHTSGSF*TPKSLPHYVTCLSI Trigger: AATGGAAAGGCATGTAACATAGTGTGGCAAGGACTTAGGAGTCCAGAAGCTCCCAGATGTGTGCACCTGTGGAATCCGCCACCACACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS TCA 90 bp | AGGGGGTGGCAACTGGTAAAGAAGACATTAACAGGCAGATGGGGATaGAAACTTCATCTTGATCAGATCCAGGTGCCATGCTGGCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: RGWQLVKKTLTGRWG*KLHLDQIQVPCWLP Trigger: GGGCAGCCAGCATGGCACCTGGATCTGATCAAGATGAAGTTTTCATCCCCATCTGCCTGTTAATGTCTTCTTTACCAGTTGCCACCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS TCA 90 bp | TGTGTCCATAGAGACAGTGTCACATTGTGCAAGCATGGCAGCCTCTaGTTGGACCATGTGGATGGGAGGCAGGATGTAGGAGAGTGGATT | + |
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Preference number: 5 (lower is better) Translates to: CVHRDSVTLCKHGSL*LDHVDGRQDVGEWI Trigger: AATCCACTCTCCTACATCCTGCCTCCCATCCACATGGTCCAATCAGAGGCTGCCATGCTTGCACAATGTGACACTGTCTCTATGGACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS GCA 90 bp | CTGTTGGAGAACAATGTCCATCCCAGAGTCCATTGTGTTGATCTCTaGTGGAACGATAGCCCTCAGACGGAAGAGGAGCGTTTCACTGCA | + |
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Preference number: 5 (lower is better) Translates to: LLENNVHPRVHCVDL*WNDSPQTEEERFTA Trigger: TGCAGTGAAACGCTCCTCTTCCGTCTGAGGGCTATCGTTCCAGCAGAGATCAACACAATGGACTCTGGGATGGACATTGTTCTCCAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS TCA 90 bp | ACACTCGGAGGGCTCAGTGCCTTTCTCTTGGTCACCACCGCTAGCTaGTTTTTAATTATCTTTTGGGACTGTCGCCTCTTGGAATGCTGC | + |
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Preference number: 5 (lower is better) Translates to: TLGGLSAFLLVTTAS*FLIIFWDCRLLECC Trigger: GCAGCATTCCAAGAGGCGACAGTCCCAAAAGATAATTAAAAATCAGCTAGCGGTGGTGACCAAGAGAAAGGCACTGAGCCCTCCGAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CCA 90 bp | TTGGAGAACAATGTCCATCCCAGAGTCCATTGTGTTGATCTCTGCTaGAACGATAGCCCTCAGACGGAAGAGGAGCGTTTCACTGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: LENNVHPRVHCVDLC*NDSPQTEEERFTAN Trigger: GTTTGCAGTGAAACGCTCCTCTTCCGTCTGAGGGCTATCGTTCCAGCAGAGATCAACACAATGGACTCTGGGATGGACATTGTTCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS GCA 90 bp | TTCCACAGGTGCACACATCTGGGAGCTTCTGGACTCCTAAGTCCTTaGCACACTATGTTACATGCCTTTCCATTTGTTCAGCATGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: FHRCTHLGASGLLSP*HTMLHAFPFVQHGR Trigger: CCTTCCATGCTGAACAAATGGAAAGGCATGTAACATAGTGTGGCAAGGACTTAGGAGTCCAGAAGCTCCCAGATGTGTGCACCTGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS GCA 90 bp | TCTCTTCCAGAGAAACTTCATCTGTGTCTGAGCCCAGGGCCTTGTTaGCTGGCTAGTGTCTTCATAGCTCAGATTCCTGTAACTATGAAG | + |
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Preference number: 5 (lower is better) Translates to: SLPEKLHLCLSPGPC*LASVFIAQIPVTMK Trigger: CTTCATAGTTACAGGAATCTGAGCTATGAAGACACTAGCCAGGCAACAAGGCCCTGGGCTCAGACACAGATGAAGTTTCTCTGGAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS GCA 90 bp | AGCATGGAAGGAGGTAGGAGAGAGATGACCCATGTCATGGGCCTATaGAAGAGACCATTAAAACCAAGACTTTCTGGAATTTCCATGGAG | + |
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Preference number: 5 (lower is better) Translates to: SMEGGRREMTHVMGL*KRPLKPRLSGISME Trigger: CTCCATGGAAATTCCAGAAAGTCTTGGTTTTAATGGTCTCTTGCATAGGCCCATGACATGGGTCATCTCTCTCCTACCTCCTTCCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS GCA 90 bp | CAACAACAACAACAAACCCAGATTATATCATTGAGGATGCAAAGATaGTTTCATTATCTGGAGTCCCCATCTGTCCTTTCCTCCCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: QQQQQTQIISLRMQR*FHYLESPSVLSSPG Trigger: GCCAGGGGAGGAAAGGACAGATGGGGACTCCAGATAATGAAAGCATCTTTGCATCCTCAATGATATAATCTGGGTTTGTTGTTGTTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS TCA 90 bp | TCTGTCTCAAACAACAACAACAACAACAAACCCAGATTATATCATTaGGGATGCAAAGATGCTTTCATTATCTGGAGTCCCCATCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SVSNNNNNNKPRLYH*GCKDAFIIWSPHLS Trigger: GGACAGATGGGGACTCCAGATAATGAAAGCATCTTTGCATCCTCAATGATATAATCTGGGTTTGTTGTTGTTGTTGTTGTTTGAGACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS CAA 72 bp | ATCCCCACGGCCTCAGCCGCTCTTCATCGGCCTGACTaGGGCTTCCAGAGCCTGCCCAGCCCACGTGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: IPTASAALHRPD*GFQSLPSPRGA Trigger: AGCCCCACGTGGGCTGGGCAGGCTCTGGAAGCCCAAGTCAGGCCGATGAAGAGCGGCTGAGGCCGTGGGGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS CAA 90 bp | GTAAACCAGATCCCCACGGCCTCAGCCGCTCTTCATCGGCCTGACTaGGGCTTCCAGAGCCTGCCCAGCCCACGTGGGGCTGGTTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: VNQIPTASAALHRPD*GFQSLPSPRGAGLA Trigger: TGCCAAACCAGCCCCACGTGGGCTGGGCAGGCTCTGGAAGCCCAAGTCAGGCCGATGAAGAGCGGCTGAGGCCGTGGGGATCTGGTTTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS GCA 72 bp | CCGCTCTTCATCGGCCTGACTTGGGCTTCCAGAGCCTaGCCAGCCCACGTGGGGCTGGTTTGGCAAAAACTG | + |
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Preference number: 6 (lower is better) Translates to: PLFIGLTWASRA*PAHVGLVWQKL Trigger: CAGTTTTTGCCAAACCAGCCCCACGTGGGCTGGGCAGGCTCTGGAAGCCCAAGTCAGGCCGATGAAGAGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS CCA 72 bp | AGGCGGCGTCACCGCTCACTGCAGGCTGTTCCCACGTaGTCAGGCGCAGGGTCTTTCTGCCTCATCACTGAA | + |
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Preference number: 6 (lower is better) Translates to: RRRHRSLQAVPT*SGAGSFCLITE Trigger: TTCAGTGATGAGGCAGAAAGACCCTGCGCCTGACCACGTGGGAACAGCCTGCAGTGAGCGGTGACGCCGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS TCA 72 bp | CTGGAGGCTGTTCTGGGGAGGACGCACTGTGTCCCATaGCTCTCCAGTCTCCTCGGAGCTGCTGAGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LEAVLGRTHCVP*LSSLLGAAELP Trigger: AGGAAGCTCAGCAGCTCCGAGGAGACTGGAGAGTCATGGGACACAGTGCGTCCTCCCCAGAACAGCCTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS CCA 72 bp | CTCTGTCTGGTTGCAGAGGCTGGTGTGTGGAGGGTGTaGTGGCGGATTCCACAGGTGCACACATCTGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LCLVAEAGVWRV*WRIPQVHTSGS Trigger: GCTCCCAGATGTGTGCACCTGTGGAATCCGCCACCACACCCTCCACACACCAGCCTCTGCAACCAGACAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CCA 72 bp | TTCCTGCCTCCAAGCGTGTGCTCTGAACTGGCAGGCTaGAGGCTGTTCTGGGGAGGACGCACTGTGTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: FLPPSVCSELAG*RLFWGGRTVSH Trigger: ATGGGACACAGTGCGTCCTCCCCAGAACAGCCTCCAGCCTGCCAGTTCAGAGCACACGCTTGGAGGCAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS CAA 72 bp | TCCACAGCTCTCAGCTGGCCCATAGCAGGAATGGGGTaGGACCTCAGCCTTCCTGCCTCCAAGCGTGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: STALSWPIAGMG*DLSLPASKRVL Trigger: GAGCACACGCTTGGAGGCAGGAAGGCTGAGGTCCAACCCCATTCCTGCTATGGGCCAGCTGAGAGCTGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS CAA 90 bp | CCCTCAGACGGAAGAGGAGCGTTTCACTGCAAACCGAGAGGAGGCTaGGTGCCTTTCCAGCACTTCCGTGGCTGTGGAGCTGACATGACT | + |
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Preference number: 6 (lower is better) Translates to: PSDGRGAFHCKPRGG*VPFQHFRGCGADMT Trigger: AGTCATGTCAGCTCCACAGCCACGGAAGTGCTGGAAAGGCACCAAGCCTCCTCTCGGTTTGCAGTGAAACGCTCCTCTTCCGTCTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421976.2 ENST00000666899.1 |
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| CDS GCA 72 bp | CTGGTGTGTGGAGGGTGTGGTGGCGGATTCCACAGGTaGACACATCTGGGAGCTTCTGGACTCCTAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LVCGGCGGGFHR*THLGASGLLSP Trigger: AGGACTTAGGAGTCCAGAAGCTCCCAGATGTGTGCACCTGTGGAATCCGCCACCACACCCTCCACACACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CCA 72 bp | GAAGAGGAGCGTTTCACTGCAAACCGAGAGGAGGCTTaGTGCCTTTCCAGCACTTCCGTGGCTGTGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: EEERFTANREEA*CLSSTSVAVEL Trigger: CAGCTCCACAGCCACGGAAGTGCTGGAAAGGCACCAAGCCTCCTCTCGGTTTGCAGTGAAACGCTCCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421976.2 ENST00000666899.1 |
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| CDS CAA 72 bp | GGAAGAGGAGCGTTTCACTGCAAACCGAGAGGAGGCTaGGTGCCTTTCCAGCACTTCCGTGGCTGTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: GRGAFHCKPRGG*VPFQHFRGCGA Trigger: AGCTCCACAGCCACGGAAGTGCTGGAAAGGCACCAAGCCTCCTCTCGGTTTGCAGTGAAACGCTCCTCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421976.2 ENST00000666899.1 |
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| CDS CCA 72 bp | GAAGAGGAGCGTTTCACTGCAAACCGAGAGGAGGCTTaGTGCCTTTCCAGCACTTCCGTGGCTGCTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: EEERFTANREEA*CLSSTSVAASE Trigger: TTCAGAAGCAGCCACGGAAGTGCTGGAAAGGCACCAAGCCTCCTCTCGGTTTGCAGTGAAACGCTCCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660932.1 |
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| CDS CAA 90 bp | GGCCAGGCCTGTTGGAGAACAATGTCCATCCCAGAGTCCATTGTGTaGATCTCTGCTGGAACGATAGCCCTCAGACGGAAGAGGAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: GQACWRTMSIPESIV*ISAGTIALRRKRSV Trigger: AACGCTCCTCTTCCGTCTGAGGGCTATCGTTCCAGCAGAGATCAACACAATGGACTCTGGGATGGACATTGTTCTCCAACAGGCCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS GCA 72 bp | TTGAATACGGCTCTTCCTTTTCTTGCATCCTCCATGTaGCCTCCTGGTAAACCAGATCCCCACGGCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LNTALPFLASSM*PPGKPDPHGLS Trigger: GCTGAGGCCGTGGGGATCTGGTTTACCAGGAGGGCACATGGAGGATGCAAGAAAAGGAAGAGCCGTATTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS GCA 72 bp | GATGGGAGGCAGGATGTAGGAGAGTGGATTAGTCAATaGCTAGAACAGGATGCTGGGCAGGTCCCTAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: DGRQDVGEWISQ*LEQDAGQVPSD Trigger: GTCACTAGGGACCTGCCCAGCATCCTGTTCTAGGCATTGACTAATCCACTCTCCTACATCCTGCCTCCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CCA 72 bp | CTTGGTGGACGAAGACACAATGTCTGCTTCCAGGAATaGACGGCCAAGCTTCTGGGTTTACCGGCTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: LGGRRHNVCFQE*TAKLLGLPALA Trigger: TGCAAGAGCCGGTAAACCCAGAAGCTTGGCCGTCCATTCCTGGAAGCAGACATTGTGTCTTCGTCCACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 ENST00000671597.1 |
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| CDS TCA 72 bp | CACGTGGTCAGGCGCAGGGTCTTTCTGCCTCATCACTaGAGTGGGGACTTGAATACGGCTCTTCCTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: HVVRRRVFLPHH*SGDLNTALPFL Trigger: AAGAAAAGGAAGAGCCGTATTCAAGTCCCCACTTCAGTGATGAGGCAGAAAGACCCTGCGCCTGACCACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS TCA 72 bp | AGCTTCTGGGTTTACCGGCTCTTGCAGATTCTCCGGTaGGGCCACTGGATGTTTCAGGAAACACATGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SFWVYRLLQILR*GHWMFQETHGS Trigger: TGAGCCATGTGTTTCCTGAAACATCCAGTGGCCTCACCGGAGAATCTGCAAGAGCCGGTAAACCCAGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 ENST00000671597.1 |
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| CDS TCA 72 bp | AGAGACAGTGTCACATTGTGCAAGCATGGCAGCCTCTaGTTGGACCATGTGGATGGGAGGCAGGATGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: RDSVTLCKHGSL*LDHVDGRQDVG Trigger: TCCTACATCCTGCCTCCCATCCACATGGTCCAATCAGAGGCTGCCATGCTTGCACAATGTGACACTGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CCA 72 bp | GGTCAGGCGCAGGGTCTTTCTGCCTCATCACTGAAGTaGGGACTTGAATACGGCTCTTCCTTTTCTTGCATC | + |
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Preference number: 6 (lower is better) Translates to: GQAQGLSASSLK*GLEYGSSFSCI Trigger: GATGCAAGAAAAGGAAGAGCCGTATTCAAGTCCCCACTTCAGTGATGAGGCAGAAAGACCCTGCGCCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS CCA 72 bp | TGGCGGATTCCACAGGTGCACACATCTGGGAGCTTCTaGACTCCTAAGTCCTTGCCACACTATGTTACATGC | + |
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Preference number: 6 (lower is better) Translates to: WRIPQVHTSGSF*TPKSLPHYVTC Trigger: GCATGTAACATAGTGTGGCAAGGACTTAGGAGTCCAGAAGCTCCCAGATGTGTGCACCTGTGGAATCCGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS TCA 72 bp | CTTGTGAGGAGGGTATTATTACCCCCGCTTTACAGGTaGGAAGACTGCGGCTCAGAGAAGCCGAATGACTTG | + |
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Preference number: 6 (lower is better) Translates to: LVRRVLLPPLYR*EDCGSEKPNDL Trigger: CAAGTCATTCGGCTTCTCTGAGCCGCAGTCTTCTCACCTGTAAAGCGGGGGTAATAATACCCTCCTCACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS GCA 72 bp | AACAATGTCCATCCCAGAGTCCATTGTGTTGATCTCTaGTGGAACGATAGCCCTCAGACGGAAGAGGAGCGT | + |
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Preference number: 6 (lower is better) Translates to: NNVHPRVHCVDL*WNDSPQTEEER Trigger: ACGCTCCTCTTCCGTCTGAGGGCTATCGTTCCAGCAGAGATCAACACAATGGACTCTGGGATGGACATTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CCA 72 bp | AATGTCCATCCCAGAGTCCATTGTGTTGATCTCTGCTaGAACGATAGCCCTCAGACGGAAGAGGAGCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: NVHPRVHCVDLC*NDSPQTEEERF Trigger: GAAACGCTCCTCTTCCGTCTGAGGGCTATCGTTCCAGCAGAGATCAACACAATGGACTCTGGGATGGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CAA 90 bp | CTGGCTAGTGTCTTCATAGCTCAGATTCCTGTAACTATGAAGGGGTaGGTCCTTCCAGCTGCGTTCCATGAGAGAGGTGATGCCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LASVFIAQIPVTMKG*VLPAAFHERGDAFS Trigger: GGAAAAGGCATCACCTCTCTCATGGAACGCAGCTGGAAGGACCAACCCCTTCATAGTTACAGGAATCTGAGCTATGAAGACACTAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS TCA 72 bp | GCAGGGTCTTTCTGCCTCATCACTGAAGTGGGGACTTaGATACGGCTCTTCCTTTTCTTGCATCCTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: AGSFCLITEVGT*IRLFLFLHPPC Trigger: ACATGGAGGATGCAAGAAAAGGAAGAGCCGTATTCAAGTCCCCACTTCAGTGATGAGGCAGAAAGACCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 ENST00000670470.1 |
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| CDS GCA 72 bp | TTACGTGCATCGCCTCATTCACACCTTGCAGCTGTGTaGAGTACATTTACTGCCCCCATTTTACAGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LRASPHSHLAAV*STFTAPILQRR Trigger: CCTCCTCTGTAAAATGGGGGCAGTAAATGTACTGCACACAGCTGCAAGGTGTGAATGAGGCGATGCACGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421976.2 ENST00000666899.1 |
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| CDS GCA 72 bp | GCGTTCCATGAGAGAGGTGATGCCTTTTCCATTACATaGCAGGCCCTTGAGTCCTTTTGGCCATTAAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: AFHERGDAFSIT*QALESFWPLKD Trigger: GTCCTTTAATGGCCAAAAGGACTCAAGGGCCTGGCATGTAATGGAAAAGGCATCACCTCTCTCATGGAACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS CAA 72 bp | TGTTGGAGAACAATGTCCATCCCAGAGTCCATTGTGTaGATCTCTGCTGGAACGATAGCCCTCAGACGGAAG | + |
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Preference number: 6 (lower is better) Translates to: CWRTMSIPESIV*ISAGTIALRRK Trigger: CTTCCGTCTGAGGGCTATCGTTCCAGCAGAGATCAACACAATGGACTCTGGGATGGACATTGTTCTCCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS TCA 72 bp | GGGCTCAGTGCCTTTCTCTTGGTCACCACCGCTAGCTaGTTTTTAATTATCTTTTGGGACTGTCGCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: GLSAFLLVTTAS*FLIIFWDCRLL Trigger: CAAGAGGCGACAGTCCCAAAAGATAATTAAAAATCAGCTAGCGGTGGTGACCAAGAGAAAGGCACTGAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CAA 72 bp | GTCTTCATAGCTCAGATTCCTGTAACTATGAAGGGGTaGGTCCTTCCAGCTGCGTTCCATGAGAGAGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: VFIAQIPVTMKG*VLPAAFHERGD Trigger: ATCACCTCTCTCATGGAACGCAGCTGGAAGGACCAACCCCTTCATAGTTACAGGAATCTGAGCTATGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS CAA 90 bp | CAGAGCCTACCTTTTAGCCATGACCTTCCTCTTCCCTCCTCAGAATaGAGTATATATTCAGTTCTGCCCAAGAACAGGTCCTGGCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: QSLPFSHDLPLPSSE*SIYSVLPKNRSWQS Trigger: GCTTTGCCAGGACCTGTTCTTGGGCAGAACTGAATATATACTCAATTCTGAGGAGGGAAGAGGAAGGTCATGGCTAAAAGGTAGGCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421976.2 ENST00000666899.1 |
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| CDS CAA 90 bp | ATTCCACAGGTGCACACATCTGGGAGCTTCTGGACTCCTAAGTCCTaGCCACACTATGTTACATGCCTTTCCATTTGTTCAGCATGGAAG | + |
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Preference number: 6 (lower is better) Translates to: IPQVHTSGSFWTPKS*PHYVTCLSICSAWK Trigger: CTTCCATGCTGAACAAATGGAAAGGCATGTAACATAGTGTGGCAAGGACTTAGGAGTCCAGAAGCTCCCAGATGTGTGCACCTGTGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CAA 72 bp | GTGCACACATCTGGGAGCTTCTGGACTCCTAAGTCCTaGCCACACTATGTTACATGCCTTTCCATTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: VHTSGSFWTPKS*PHYVTCLSICS Trigger: TGAACAAATGGAAAGGCATGTAACATAGTGTGGCAAGGACTTAGGAGTCCAGAAGCTCCCAGATGTGTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS GCA 72 bp | GGAGGTAGGAGAGAGATGACCCATGTCATGGGCCTATaGAAGAGACCATTAAAACCAAGACTTTCTGGAATT | + |
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Preference number: 6 (lower is better) Translates to: GGRREMTHVMGL*KRPLKPRLSGI Trigger: AATTCCAGAAAGTCTTGGTTTTAATGGTCTCTTGCATAGGCCCATGACATGGGTCATCTCTCTCCTACCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CAA 72 bp | CCTTTTAGCCATGACCTTCCTCTTCCCTCCTCAGAATaGAGTATATATTCAGTTCTGCCCAAGAACAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PFSHDLPLPSSE*SIYSVLPKNRS Trigger: GGACCTGTTCTTGGGCAGAACTGAATATATACTCAATTCTGAGGAGGGAAGAGGAAGGTCATGGCTAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421976.2 ENST00000666899.1 |
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| CDS CAA 72 bp | CAACTCTGTGCACTTTGTATTTTTCCCCACAAAGCCTaGCAACAACCTTGTGAGGAGGGTATTATTACCCCC | + |
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Preference number: 6 (lower is better) Translates to: QLCALCIFPHKA*QQPCEEGIITP Trigger: GGGGGTAATAATACCCTCCTCACAAGGTTGTTGCAAGGCTTTGTGGGGAAAAATACAAAGTGCACAGAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS TCA 72 bp | CAACTGGTAAAGAAGACATTAACAGGCAGATGGGGATaGAAACTTCATCTTGATCAGATCCAGGTGCCATGC | + |
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Preference number: 6 (lower is better) Translates to: QLVKKTLTGRWG*KLHLDQIQVPC Trigger: GCATGGCACCTGGATCTGATCAAGATGAAGTTTTCATCCCCATCTGCCTGTTAATGTCTTCTTTACCAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS CAA 90 bp | CTCTGTCTCAAACAACAACAACAACAACAAACCCAGATTATATCATaGAGGATGCAAAGATGCTTTCATTATCTGGAGTCCCCATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LCLKQQQQQQTQIIS*RMQRCFHYLESPSV Trigger: GACAGATGGGGACTCCAGATAATGAAAGCATCTTTGCATCCTCAATGATATAATCTGGGTTTGTTGTTGTTGTTGTTGTTTGAGACAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS CCA 72 bp | ATTATCACTATAGGCTTTCTCTCTTCCCAATTCTCATaGCAGAAGATGGCTGCTATCGAATTCCAAGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: IITIGFLSSQFS*QKMAAIEFQVL Trigger: TAAAACTTGGAATTCGATAGCAGCCATCTTCTGCCATGAGAATTGGGAAGAGAGAAAGCCTATAGTGATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS TCA 72 bp | AACAACAACAACAACAACAAACCCAGATTATATCATTaGGGATGCAAAGATGCTTTCATTATCTGGAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: NNNNNNKPRLYH*GCKDAFIIWSP Trigger: GGGACTCCAGATAATGAAAGCATCTTTGCATCCTCAATGATATAATCTGGGTTTGTTGTTGTTGTTGTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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| CDS CAA 72 bp | AAAGAAAATAAGTCTTCTCTCAACTTGACCCTGATCTaGGGTCAAGTTCTACATCAGGACCAATTAATGTGT | + |
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Preference number: 6 (lower is better) Translates to: KENKSSLNLTLI*GQVLHQDQLMC Trigger: ACACATTAATTGGTCCTGATGTAGAACTTGACCCAAGATCAGGGTCAAGTTGAGAGAAGACTTATTTTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421976.2 ENST00000660932.1 ENST00000666899.1 |
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| CDS TCA 72 bp | AGTTTATTTCAGTTCATAGAAGTTGACATCTCCACCTaGTACATGGGACATCAAAAATATATGTGTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: SLFQFIEVDIST*YMGHQKYMCGK Trigger: TTTGCCACACATATATTTTTGATGTCCCATGTATCAGGTGGAGATGTCAACTTCTATGAACTGAAATAAACT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000670470.1 ENST00000671597.1 |
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