Pregenerated sensors for LINC01927 (Homo sapiens)
Ensembl gene IDs: ENSG00000266312Ensembl transcript IDs: ENST00000582231.2, ENST00000658908.1, ENST00000658993.1, ENST00000661118.1, ENST00000661700.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGCTCCTCGAGTGGGTTGAGCCTGAAACCCCACATCCACAGACGTaGCCAGCGGCCTTGGGTGCTCAACACAGGCTCGTTCAGGTACGA | + |
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Preference number: 5 (lower is better) Translates to: LLLEWVEPETPHPQT*PAALGAQHRLVQVR Trigger: TCGTACCTGAACGAGCCTGTGTTGAGCACCCAAGGCCGCTGGGCACGTCTGTGGATGTGGGGTTTCAGGCTCAACCCACTCGAGGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582231.2 ENST00000658908.1 |
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| CDS CCA 90 bp | GGGTTGAGCCTGAAACCCCACATCCACAGACGTGCCCAGCGGCCTTaGGTGCTCAACACAGGCTCGTTCAGGTACGACCAGATAACGGGG | + |
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Preference number: 5 (lower is better) Translates to: GLSLKPHIHRRAQRP*VLNTGSFRYDQITG Trigger: CCCCGTTATCTGGTCGTACCTGAACGAGCCTGTGTTGAGCACCCAAGGCCGCTGGGCACGTCTGTGGATGTGGGGTTTCAGGCTCAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582231.2 ENST00000658908.1 |
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| CDS CCA 90 bp | CCTCTGGAAGAGACACAAGGAGTGAGGGCGAGACTGGAAAGGGTGTaGAAGGGAGAACCTTCCTTATTGCCTAGCGTCCCTCAGGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: PLEETQGVRARLERV*KGEPSLLPSVPQGP Trigger: TGGCCCCTGAGGGACGCTAGGCAATAAGGAAGGTTCTCCCTTCCACACCCTTTCCAGTCTCGCCCTCACTCCTTGTGTCTCTTCCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658993.1 |
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| CDS GCA 90 bp | GACACCCCAGTTATTGGGGGCATCTTCTCCAACAGTAGGGAGGACTaGGGCGAGGGCAGCTGTGGAGATGGTAGAATCTTTCCTGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: DTPVIGGIFSNSRED*GEGSCGDGRIFPVG Trigger: TCCCACAGGAAAGATTCTACCATCTCCACAGCTGCCCTCGCCGCAGTCCTCCCTACTGTTGGAGAAGATGCCCCCAATAACTGGGGTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000582231.2 ENST00000658908.1 ENST00000658993.1 ENST00000661700.1 |
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| CDS CCA 90 bp | GGCGAGGGCAGCTGTGGAGATGGTAGAATCTTTCCTGTGGGATTCTaGAATGTTGTGTCCCCTCTGGAAGAGACACAAGGAGTGAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: GEGSCGDGRIFPVGF*NVVSPLEETQGVRA Trigger: CGCCCTCACTCCTTGTGTCTCTTCCAGAGGGGACACAACATTCCAGAATCCCACAGGAAAGATTCTACCATCTCCACAGCTGCCCTCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658993.1 |
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| CDS TCA 90 bp | GTGTTCTACCTCCTTACTGGACGCATAGCGATGGCCAGCACAGGATaGGGCCATGGGAGGATCTTAATGACACAGTCCACTCCAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: VFYLLTGRIAMASTG*GHGRILMTQSTPAP Trigger: TGGAGCTGGAGTGGACTGTGTCATTAAGATCCTCCCATGGCCTCATCCTGTGCTGGCCATCGCTATGCGTCCAGTAAGGAGGTAGAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582231.2 |
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| CDS CCA 90 bp | CCTCCTTACTGGACGCATAGCGATGGCCAGCACAGGATGAGGCCATaGGAGGATCTTAATGACACAGTCCACTCCAGCTCCATGATGTGT | + |
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Preference number: 5 (lower is better) Translates to: PPYWTHSDGQHRMRP*EDLNDTVHSSSMMC Trigger: ACACATCATGGAGCTGGAGTGGACTGTGTCATTAAGATCCTCCCATGGCCTCATCCTGTGCTGGCCATCGCTATGCGTCCAGTAAGGAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582231.2 |
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| CDS CCA 90 bp | AGGACTGCGGCGAGGGCAGCTGTGGAGATGGTAGAATCTTTCCTGTaGGATTCTGGAATGTTGTGTCCCCTCTGGAAGAGACACAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: RTAARAAVEMVESFL*DSGMLCPLWKRHKE Trigger: CTCCTTGTGTCTCTTCCAGAGGGGACACAACATTCCAGAATCCCACAGGAAAGATTCTACCATCTCCACAGCTGCCCTCGCCGCAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658993.1 ENST00000661700.1 |
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| CDS TCA 90 bp | GATCTGAAACGCAAGTCCCCTACGGGATGCTCCCACGTGGATCTTTaGCTCTTCCACAGCAAAGTCCTGTGTGCTTTCTGTGGCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: DLKRKSPTGCSHVDL*LFHSKVLCAFCGSS Trigger: GGATGAGCCACAGAAAGCACACAGGACTTTGCTGTGGAAGAGTCAAAGATCCACGTGGGAGCATCCCGTAGGGGACTTGCGTTTCAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000582231.2 ENST00000658908.1 ENST00000658993.1 ENST00000661118.1 ENST00000661700.1 |
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| CDS TCA 90 bp | GGAAGGGAGAACCTTCCTTATTGCCTAGCGTCCCTCAGGGGCCAGTaGCCAACCTTATTAGCCACCTCTGTGCATTCAACCACTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: GRENLPYCLASLRGQ*PTLLATSVHSTTSS Trigger: AGAGGAAGTGGTTGAATGCACAGAGGTGGCTAATAAGGTTGGTCACTGGCCCCTGAGGGACGCTAGGCAATAAGGAAGGTTCTCCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658993.1 |
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| CDS TCA 90 bp | GTGTTCTACCTCCTTACTGGACGCATAGCGATGGCCAGCACAGGATaGGGCCATGGGAGGATCTTAATGACACAGTCCACTCTGCAAACC | + |
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Preference number: 5 (lower is better) Translates to: VFYLLTGRIAMASTG*GHGRILMTQSTLQT Trigger: GGTTTGCAGAGTGGACTGTGTCATTAAGATCCTCCCATGGCCTCATCCTGTGCTGGCCATCGCTATGCGTCCAGTAAGGAGGTAGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658993.1 |
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| CDS CCA 90 bp | AGGACTGCGGCGAGGGCAGCTGTGGAGATGGTAGAATCTTTCCTGTaGGATTCTGGAATGTTGTGTCCCCTCTTATTAGCCACCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: RTAARAAVEMVESFL*DSGMLCPLLLATSV Trigger: CACAGAGGTGGCTAATAAGAGGGGACACAACATTCCAGAATCCCACAGGAAAGATTCTACCATCTCCACAGCTGCCCTCGCCGCAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582231.2 ENST00000658908.1 |
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| CDS CCA 90 bp | AACCAAGGTCAACAAGGCAGCAGGTATGGCCACGGCCCCTCACCGTaGACTCTGTACGAGCCAATACACTGTGTTCTATTCCCCAGTTAT | + |
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Preference number: 5 (lower is better) Translates to: NQGQQGSRYGHGPSP*TLYEPIHCVLFPSY Trigger: ATAACTGGGGAATAGAACACAGTGTATTGGCTCGTACAGAGTCCACGGTGAGGGGCCGTGGCCATACCTGCTGCCTTGTTGACCTTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658993.1 |
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| CDS CCA 90 bp | CCTCCTTACTGGACGCATAGCGATGGCCAGCACAGGATGAGGCCATaGGAGGATCTTAATGACACAGTCCACTCTGCAAACCAAGGTCAA | + |
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Preference number: 5 (lower is better) Translates to: PPYWTHSDGQHRMRP*EDLNDTVHSANQGQ Trigger: TTGACCTTGGTTTGCAGAGTGGACTGTGTCATTAAGATCCTCCCATGGCCTCATCCTGTGCTGGCCATCGCTATGCGTCCAGTAAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658993.1 |
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| CDS GCA 90 bp | ATGCTCCCACGTGGATCTTTGACTCTTCCACAGCAAAGTCCTGTGTaGTTTCTGTGGCTCATCCAGTGTTCTACCTCCTTACTGGACGCA | + |
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Preference number: 5 (lower is better) Translates to: MLPRGSLTLPQQSPV*FLWLIQCSTSLLDA Trigger: TGCGTCCAGTAAGGAGGTAGAACACTGGATGAGCCACAGAAAGCACACAGGACTTTGCTGTGGAAGAGTCAAAGATCCACGTGGGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582231.2 ENST00000658993.1 |
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| CDS GCA 90 bp | ATGCTCCCACGTGGATCTTTGACTCTTCCACAGCAAAGTCCTGTGTaGTTTCTGTGGCTCATCCAGTGTTCTACCTCCCAGCTCCATGAT | + |
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Preference number: 5 (lower is better) Translates to: MLPRGSLTLPQQSPV*FLWLIQCSTSQLHD Trigger: ATCATGGAGCTGGGAGGTAGAACACTGGATGAGCCACAGAAAGCACACAGGACTTTGCTGTGGAAGAGTCAAAGATCCACGTGGGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658908.1 ENST00000661700.1 |
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| CDS CCA 90 bp | CGTGGATCTTTGACTCTTCCACAGCAAAGTCCTGTGTGCTTTCTGTaGCTCATCCAGTGTTCTACCTCCCAGCTCCATGATGTGTCCACT | + |
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Preference number: 5 (lower is better) Translates to: RGSLTLPQQSPVCFL*LIQCSTSQLHDVST Trigger: AGTGGACACATCATGGAGCTGGGAGGTAGAACACTGGATGAGCCACAGAAAGCACACAGGACTTTGCTGTGGAAGAGTCAAAGATCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658908.1 ENST00000661700.1 |
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| CDS TCA 90 bp | ACACAGAGGCTAGAAAAGATCCACAGGACCTGTTCAACTTGCCAGTaGTCCCAAACTCCTGACCCAGGCAGATCACTAAGAGAGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: TQRLEKIHRTCSTCQ*SQTPDPGRSLRERE Trigger: CTCTCTCTCTCTTAGTGATCTGCCTGGGTCAGGAGTTTGGGATCACTGGCAAGTTGAACAGGTCCTGTGGATCTTTTCTAGCCTCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658993.1 |
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| CDS TCA 90 bp | GTGTTCTATTCCCCAGTTATTTCTGAATACGGCCACAGGGAGATGTaGGCCAGCCCTCCTTCTCTAGGGCACACAGAGGCTAGAAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: VFYSPVISEYGHREM*ASPPSLGHTEARKD Trigger: ATCTTTTCTAGCCTCTGTGTGCCCTAGAGAAGGAGGGCTGGCTCACATCTCCCTGTGGCCGTATTCAGAAATAACTGGGGAATAGAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658993.1 |
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| CDS TCA 90 bp | ACTCTGTACGAGCCAATACACTGTGTTCTATTCCCCAGTTATTTCTaGATACGGCCACAGGGAGATGTGAGCCAGCCCTCCTTCTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: TLYEPIHCVLFPSYF*IRPQGDVSQPSFSR Trigger: CCTAGAGAAGGAGGGCTGGCTCACATCTCCCTGTGGCCGTATTCAGAAATAACTGGGGAATAGAACACAGTGTATTGGCTCGTACAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658993.1 |
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| CDS GCA 90 bp | ATGCTCCCACGTGGATCTTTGACTCTTCCACAGCAAAGTCCTGTGTaGTTTCTGTGGCTCATCCAGTGTTCTACCTCCTTATTAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: MLPRGSLTLPQQSPV*FLWLIQCSTSLLAT Trigger: GGTGGCTAATAAGGAGGTAGAACACTGGATGAGCCACAGAAAGCACACAGGACTTTGCTGTGGAAGAGTCAAAGATCCACGTGGGAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661118.1 |
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| CDS CCA 90 bp | CGTGGATCTTTGACTCTTCCACAGCAAAGTCCTGTGTGCTTTCTGTaGCTCATCCAGTGTTCTACCTCCTTATTAGCCACCTCTGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: RGSLTLPQQSPVCFL*LIQCSTSLLATSVH Trigger: ATGCACAGAGGTGGCTAATAAGGAGGTAGAACACTGGATGAGCCACAGAAAGCACACAGGACTTTGCTGTGGAAGAGTCAAAGATCCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661118.1 |
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| CDS TCA 90 bp | CGTGATTTTTCACCAGTGAAGGACTCTCTTGCTGCTGGACATACATaGAAAGCATCATCTGATCTGAAACGCAAGTCCCCTACGGGATGC | + |
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Preference number: 5 (lower is better) Translates to: RDFSPVKDSLAAGHT*KASSDLKRKSPTGC Trigger: GCATCCCGTAGGGGACTTGCGTTTCAGATCAGATGATGCTTTTCATGTATGTCCAGCAGCAAGAGAGTCCTTCACTGGTGAAAAATCACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000582231.2 ENST00000658908.1 ENST00000658993.1 ENST00000661118.1 ENST00000661700.1 |
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| CDS TCA 90 bp | AAAGATCCACAGGACCTGTTCAACTTGCCAGTGATCCCAAACTCCTaGCCCAGGCAGATCACTAAGAGAGAGAGAGAAATATTCCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: KDPQDLFNLPVIPNS*PRQITKREREIFPF Trigger: AAAAGGGAATATTTCTCTCTCTCTCTTAGTGATCTGCCTGGGTCAGGAGTTTGGGATCACTGGCAAGTTGAACAGGTCCTGTGGATCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658993.1 |
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| CDS GCA 90 bp | CGTCCTCACCAAATTAGGGGATTTAATTTGCAGATATCTAAGGAGTaGTTTGAAATGAAAGATGAACTAAAATCTGCTCTGAGGCCCGTG | + |
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Preference number: 5 (lower is better) Translates to: RPHQIRGFNLQISKE*FEMKDELKSALRPV Trigger: CACGGGCCTCAGAGCAGATTTTAGTTCATCTTTCATTTCAAAGCACTCCTTAGATATCTGCAAATTAAATCCCCTAATTTGGTGAGGACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000582231.2 ENST00000658908.1 ENST00000658993.1 ENST00000661118.1 ENST00000661700.1 |
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| CDS GCA 72 bp | GAGTGGGTTGAGCCTGAAACCCCACATCCACAGACGTaGCCAGCGGCCTTGGGTGCTCAACACAGGCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: EWVEPETPHPQT*PAALGAQHRLV Trigger: AACGAGCCTGTGTTGAGCACCCAAGGCCGCTGGGCACGTCTGTGGATGTGGGGTTTCAGGCTCAACCCACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582231.2 ENST00000658908.1 |
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| CDS CCA 72 bp | CTGAAACCCCACATCCACAGACGTGCCCAGCGGCCTTaGGTGCTCAACACAGGCTCGTTCAGGTACGACCAG | + |
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Preference number: 6 (lower is better) Translates to: LKPHIHRRAQRP*VLNTGSFRYDQ Trigger: CTGGTCGTACCTGAACGAGCCTGTGTTGAGCACCCAAGGCCGCTGGGCACGTCTGTGGATGTGGGGTTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582231.2 ENST00000658908.1 |
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| CDS CCA 72 bp | CCACTCTGCAAACCAAGGTCAACAAGGCAGCAGGTATaGCCACGGCCCCTCACCGTGGACTCTGTACGAGCC | + |
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Preference number: 6 (lower is better) Translates to: PLCKPRSTRQQV*PRPLTVDSVRA Trigger: GGCTCGTACAGAGTCCACGGTGAGGGGCCGTGGCCATACCTGCTGCCTTGTTGACCTTGGTTTGCAGAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658993.1 |
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| CDS CAA 72 bp | CCTGAAACCCCACATCCACAGACGTGCCCAGCGGCCTaGGGTGCTCAACACAGGCTCGTTCAGGTACGACCA | + |
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Preference number: 6 (lower is better) Translates to: PETPHPQTCPAA*GAQHRLVQVRP Trigger: TGGTCGTACCTGAACGAGCCTGTGTTGAGCACCCAAGGCCGCTGGGCACGTCTGTGGATGTGGGGTTTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582231.2 ENST00000658908.1 |
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| CDS CAA 90 bp | TGGGTTGAGCCTGAAACCCCACATCCACAGACGTGCCCAGCGGCCTaGGGTGCTCAACACAGGCTCGTTCAGGTACGACCAGATAACGGG | + |
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Preference number: 6 (lower is better) Translates to: WVEPETPHPQTCPAA*GAQHRLVQVRPDNG Trigger: CCCGTTATCTGGTCGTACCTGAACGAGCCTGTGTTGAGCACCCAAGGCCGCTGGGCACGTCTGTGGATGTGGGGTTTCAGGCTCAACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582231.2 ENST00000658908.1 |
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| CDS CCA 72 bp | CAACAAGGCAGCAGGTATGGCCACGGCCCCTCACCGTaGACTCTGTACGAGCCAATACACTGTGTTCTATTC | + |
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Preference number: 6 (lower is better) Translates to: QQGSRYGHGPSP*TLYEPIHCVLF Trigger: GAATAGAACACAGTGTATTGGCTCGTACAGAGTCCACGGTGAGGGGCCGTGGCCATACCTGCTGCCTTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658993.1 |
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| CDS TCA 72 bp | CTCCTTACTGGACGCATAGCGATGGCCAGCACAGGATaGGGCCATGGGAGGATCTTAATGACACAGTCCACT | + |
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Preference number: 6 (lower is better) Translates to: LLTGRIAMASTG*GHGRILMTQST Trigger: AGTGGACTGTGTCATTAAGATCCTCCCATGGCCTCATCCTGTGCTGGCCATCGCTATGCGTCCAGTAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582231.2 ENST00000658993.1 |
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| CDS TCA 72 bp | CGCAAGTCCCCTACGGGATGCTCCCACGTGGATCTTTaGCTCTTCCACAGCAAAGTCCTGTGTGCTTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: RKSPTGCSHVDL*LFHSKVLCAFC Trigger: ACAGAAAGCACACAGGACTTTGCTGTGGAAGAGTCAAAGATCCACGTGGGAGCATCCCGTAGGGGACTTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000582231.2 ENST00000658908.1 ENST00000658993.1 ENST00000661118.1 ENST00000661700.1 |
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| CDS GCA 72 bp | GTTATTGGGGGCATCTTCTCCAACAGTAGGGAGGACTaGGGCGAGGGCAGCTGTGGAGATGGTAGAATCTTT | + |
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Preference number: 6 (lower is better) Translates to: VIGGIFSNSRED*GEGSCGDGRIF Trigger: AAAGATTCTACCATCTCCACAGCTGCCCTCGCCGCAGTCCTCCCTACTGTTGGAGAAGATGCCCCCAATAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000582231.2 ENST00000658908.1 ENST00000658993.1 ENST00000661700.1 |
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| CDS CAA 72 bp | ACGCAAGTCCCCTACGGGATGCTCCCACGTGGATCTTaGACTCTTCCACAGCAAAGTCCTGTGTGCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: TQVPYGMLPRGS*TLPQQSPVCFL Trigger: CAGAAAGCACACAGGACTTTGCTGTGGAAGAGTCAAAGATCCACGTGGGAGCATCCCGTAGGGGACTTGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000582231.2 ENST00000658908.1 ENST00000658993.1 ENST00000661118.1 ENST00000661700.1 |
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| CDS GCA 72 bp | CGTGGATCTTTGACTCTTCCACAGCAAAGTCCTGTGTaGTTTCTGTGGCTCATCCAGTGTTCTACCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RGSLTLPQQSPV*FLWLIQCSTSQ Trigger: CTGGGAGGTAGAACACTGGATGAGCCACAGAAAGCACACAGGACTTTGCTGTGGAAGAGTCAAAGATCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658908.1 ENST00000661700.1 |
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| CDS CCA 72 bp | GCGAGGGCAGCTGTGGAGATGGTAGAATCTTTCCTGTaGGATTCTGGAATGTTGTGTCCCCTCTTATTAGCC | + |
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Preference number: 6 (lower is better) Translates to: ARAAVEMVESFL*DSGMLCPLLLA Trigger: GGCTAATAAGAGGGGACACAACATTCCAGAATCCCACAGGAAAGATTCTACCATCTCCACAGCTGCCCTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582231.2 ENST00000658908.1 |
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| CDS TCA 72 bp | CTCTCTTGCTGCTGGACATACATGAAAAGCATCATCTaGTCTGAAACGCAAGTCCCCTACGGGATGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LSCCWTYMKSII*SETQVPYGMLP Trigger: TGGGAGCATCCCGTAGGGGACTTGCGTTTCAGATCAGATGATGCTTTTCATGTATGTCCAGCAGCAAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000582231.2 ENST00000658908.1 ENST00000658993.1 ENST00000661118.1 ENST00000661700.1 |
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| CDS TCA 72 bp | CTAGAAAAGATCCACAGGACCTGTTCAACTTGCCAGTaGTCCCAAACTCCTGACCCAGGCAGATCACTAAGA | + |
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Preference number: 6 (lower is better) Translates to: LEKIHRTCSTCQ*SQTPDPGRSLR Trigger: TCTTAGTGATCTGCCTGGGTCAGGAGTTTGGGATCACTGGCAAGTTGAACAGGTCCTGTGGATCTTTTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658993.1 |
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| CDS GCA 72 bp | CGTGGATCTTTGACTCTTCCACAGCAAAGTCCTGTGTaGTTTCTGTGGCTCATCCAGTGTTCTACCTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: RGSLTLPQQSPV*FLWLIQCSTSL Trigger: TAAGGAGGTAGAACACTGGATGAGCCACAGAAAGCACACAGGACTTTGCTGTGGAAGAGTCAAAGATCCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000582231.2 ENST00000658993.1 ENST00000661118.1 |
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| CDS CCA 72 bp | AGCTGTGGAGATGGTAGAATCTTTCCTGTGGGATTCTaGAATGTTGTGTCCCCTCTGGAAGAGACACAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SCGDGRIFPVGF*NVVSPLEETQG Trigger: TCCTTGTGTCTCTTCCAGAGGGGACACAACATTCCAGAATCCCACAGGAAAGATTCTACCATCTCCACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658993.1 ENST00000661700.1 |
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| CDS CCA 72 bp | AGCTGTGGAGATGGTAGAATCTTTCCTGTGGGATTCTaGAATGTTGTGTCCCCTCTTATTAGCCACCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: SCGDGRIFPVGF*NVVSPLISHLC Trigger: ACAGAGGTGGCTAATAAGAGGGGACACAACATTCCAGAATCCCACAGGAAAGATTCTACCATCTCCACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582231.2 ENST00000658908.1 |
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| CDS CAA 72 bp | TTGCCGTCTTCGAAGGGTAATCTGGATGCTGGAGGGTaGCTTTCTGGCTTGACAAACTCAGTTTGTTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LPSSKGNLDAGG*LSGLTNSVCFH Trigger: ATGGAAACAAACTGAGTTTGTCAAGCCAGAAAGCAACCCTCCAGCATCCAGATTACCCTTCGAAGACGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658908.1 ENST00000661118.1 |
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| CDS GCA 72 bp | TTGGAAAGCAACAGGACAAAGGTCTGTCTTCAGTGGTaGGTAGACATGCTCGTGATTGAATTGGAAATAGTT | + |
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Preference number: 6 (lower is better) Translates to: LESNRTKVCLQW*VDMLVIELEIV Trigger: AACTATTTCCAATTCAATCACGAGCATGTCTACGCACCACTGAAGACAGACCTTTGTCCTGTTGCTTTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000582231.2 ENST00000658908.1 ENST00000658993.1 ENST00000661118.1 ENST00000661700.1 |
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| CDS CCA 72 bp | AGTTTGGAAAGCAACAGGACAAAGGTCTGTCTTCAGTaGTGCGTAGACATGCTCGTGATTGAATTGGAAATA | + |
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Preference number: 6 (lower is better) Translates to: SLESNRTKVCLQ*CVDMLVIELEI Trigger: TATTTCCAATTCAATCACGAGCATGTCTACGCACCACTGAAGACAGACCTTTGTCCTGTTGCTTTCCAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000582231.2 ENST00000658908.1 ENST00000658993.1 ENST00000661118.1 ENST00000661700.1 |
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| CDS CAA 72 bp | GAAGCTGGGCGTCCTCACCAAATTAGGGGATTTAATTaGCAGATATCTAAGGAGTGCTTTGAAATGAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: EAGRPHQIRGFN*QISKECFEMKD Trigger: ATCTTTCATTTCAAAGCACTCCTTAGATATCTGCAAATTAAATCCCCTAATTTGGTGAGGACGCCCAGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000582231.2 ENST00000658908.1 ENST00000658993.1 ENST00000661118.1 ENST00000661700.1 |
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| CDS CAA 90 bp | GTTATTTGGGAAGCTGGGCGTCCTCACCAAATTAGGGGATTTAATTaGCAGATATCTAAGGAGTGCTTTGAAATGAAAGATGAACTAAAA | + |
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Preference number: 6 (lower is better) Translates to: VIWEAGRPHQIRGFN*QISKECFEMKDELK Trigger: TTTTAGTTCATCTTTCATTTCAAAGCACTCCTTAGATATCTGCAAATTAAATCCCCTAATTTGGTGAGGACGCCCAGCTTCCCAAATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000582231.2 ENST00000658908.1 ENST00000658993.1 ENST00000661118.1 ENST00000661700.1 |
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| CDS CAA 72 bp | TTAAAGTCTAAAAATTATAGAACCAGCTCCTATGCGTaGAGTGATTTCAGAGCTCTCTTTTTCTTTGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: LKSKNYRTSSYA*SDFRALFFFAV Trigger: GACGGCAAAGAAAAAGAGAGCTCTGAAATCACTCAACGCATAGGAGCTGGTTCTATAATTTTTAGACTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000582231.2 ENST00000658908.1 ENST00000661118.1 |
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