Pregenerated sensors for LINC01923 (Homo sapiens)
Ensembl gene IDs: ENSG00000236653Ensembl transcript IDs: ENST00000443261.2, ENST00000451266.1, ENST00000456248.1, ENST00000658157.1, ENST00000659638.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GACTGGTTCTGGGCTTTCCATCTCTGTCACTGTATGCATGGAGCCTaGGAGGTGGGACAGATCTGTGGCAGGAGAACAGGGGCCAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: DWFWAFHLCHCMHGA*EVGQICGRRTGARN Trigger: GTTCCTGGCCCCTGTTCTCCTGCCACAGATCTGTCCCACCTCCCAGGCTCCATGCATACAGTGACAGAGATGGAAAGCCCAGAACCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CCA 90 bp | TCTCTGTCACTGTATGCATGGAGCCTGGGAGGTGGGACAGATCTGTaGCAGGAGAACAGGGGCCAGGAACCATCTCCTTGTCCTGTCCTA | + |
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Preference number: 5 (lower is better) Translates to: SLSLYAWSLGGGTDL*QENRGQEPSPCPVL Trigger: TAGGACAGGACAAGGAGATGGTTCCTGGCCCCTGTTCTCCTGCCACAGATCTGTCCCACCTCCCAGGCTCCATGCATACAGTGACAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CCA 90 bp | GAATCTGACAGAGTGACAGTCTTGAGCCAGGCAAGGGCAGGCATGTaGCTCTCCCGACTGGTGGCCCATGCTCATGGAAACCCAGATTTG | + |
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Preference number: 5 (lower is better) Translates to: ESDRVTVLSQARAGM*LSRLVAHAHGNPDL Trigger: CAAATCTGGGTTTCCATGAGCATGGGCCACCAGTCGGGAGAGCCACATGCCTGCCCTTGCCTGGCTCAAGACTGTCACTCTGTCAGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS GCA 90 bp | GAGCCAGGCAAGGGCAGGCATGTGGCTCTCCCGACTGGTGGCCCATaGTCATGGAAACCCAGATTTGAGGAAAAACTGTGGGAACTTTCA | + |
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Preference number: 5 (lower is better) Translates to: EPGKGRHVALPTGGP*SWKPRFEEKLWELS Trigger: TGAAAGTTCCCACAGTTTTTCCTCAAATCTGGGTTTCCATGAGCATGGGCCACCAGTCGGGAGAGCCACATGCCTGCCCTTGCCTGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS GCA 90 bp | TGCATTAAAGGGACTGGTTCTGGGCTTTCCATCTCTGTCACTGTATaGATGGAGCCTGGGAGGTGGGACAGATCTGTGGCAGGAGAACAG | + |
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Preference number: 5 (lower is better) Translates to: CIKGTGSGLSISVTV*MEPGRWDRSVAGEQ Trigger: CTGTTCTCCTGCCACAGATCTGTCCCACCTCCCAGGCTCCATGCATACAGTGACAGAGATGGAAAGCCCAGAACCAGTCCCTTTAATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CCA 90 bp | GGGCACTCCTCAGCTACCACAAAGACTTGTGATAAGTCCTTTCTGTaGTCCTCTTTGAGACCAGCCCCTCCTCTTGATCAGAGAGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: GHSSATTKTCDKSFL*SSLRPAPPLDQRAP Trigger: AGGGGCTCTCTGATCAAGAGGAGGGGCTGGTCTCAAAGAGGACCACAGAAAGGACTTATCACAAGTCTTTGTGGTAGCTGAGGAGTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659638.1 |
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| CDS GCA 90 bp | CTCTTGATCAGAGAGCCCCTCACTCCTCTGGAGCCTGACACTGGATaGCACTTCAGCAGTTGCTTCGTCCTTTTCCTTATCATCAAACGT | + |
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Preference number: 5 (lower is better) Translates to: LLIREPLTPLEPDTG*HFSSCFVLFLIIKR Trigger: ACGTTTGATGATAAGGAAAAGGACGAAGCAACTGCTGAAGTGGCATCCAGTGTCAGGCTCCAGAGGAGTGAGGGGCTCTCTGATCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659638.1 |
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| CDS CCA 90 bp | ACTGGTGGCCCATGCTCATGGAAACCCAGATTTGAGGAAAAACTGTaGGAACTTTCAGGTTGCTCTTCAAACTCTCCCCAGAGCAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: TGGPCSWKPRFEEKL*ELSGCSSNSPQSKG Trigger: ACCCTTGCTCTGGGGAGAGTTTGAAGAGCAACCTGAAAGTTCCCACAGTTTTTCCTCAAATCTGGGTTTCCATGAGCATGGGCCACCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS GCA 90 bp | GCTTGGAGAACTCTGGGACAGTTCCAGGGGAAAGGACTGTCACTCTaGTGCATAGTGACATCTTGTTTTGCAAATAAGTGCATTAAAGGG | + |
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Preference number: 5 (lower is better) Translates to: AWRTLGQFQGKGLSL*CIVTSCFANKCIKG Trigger: CCCTTTAATGCACTTATTTGCAAAACAAGATGTCACTATGCAGCAGAGTGACAGTCCTTTCCCCTGGAACTGTCCCAGAGTTCTCCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS TCA 90 bp | TGTCTACCAGATTTGTCTTCTACAGGTGCTGTTTCCCTGGGGGAATaGATGAGGATTCCGTGTGTGATATTCTGTGACTGTGTCAATGTC | + |
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Preference number: 5 (lower is better) Translates to: CLPDLSSTGAVSLGE*MRIPCVIFCDCVNV Trigger: GACATTGACACAGTCACAGAATATCACACACGGAATCCTCATTCATTCCCCCAGGGAAACAGCACCTGTAGAAGACAAATCTGGTAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS GCA 90 bp | TGGAGAACTCTGGGACAGTTCCAGGGGAAAGGACTGTCACTCTGCTaGATAGTGACATCTTGTTTTGCAAATAAGTGCATTAAAGGGACT | + |
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Preference number: 5 (lower is better) Translates to: WRTLGQFQGKGLSLC*IVTSCFANKCIKGT Trigger: AGTCCCTTTAATGCACTTATTTGCAAAACAAGATGTCACTATGCAGCAGAGTGACAGTCCTTTCCCCTGGAACTGTCCCAGAGTTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS GCA 90 bp | GGACTGTCACTCTGCTGCATAGTGACATCTTGTTTTGCAAATAAGTaGATTAAAGGGACTGGTTCTGGGCTTTCCATCTCTGTCACTGTA | + |
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Preference number: 5 (lower is better) Translates to: GLSLCCIVTSCFANK*IKGTGSGLSISVTV Trigger: TACAGTGACAGAGATGGAAAGCCCAGAACCAGTCCCTTTAATGCACTTATTTGCAAAACAAGATGTCACTATGCAGCAGAGTGACAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS GCA 90 bp | AAATCACCTGTCACAGTAGTGTCTACCAGATTTGTCTTCTACAGGTaGTGTTTCCCTGGGGGAATGAATGAGGATTCCGTGTGTGATATT | + |
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Preference number: 5 (lower is better) Translates to: KSPVTVVSTRFVFYR*CFPGGMNEDSVCDI Trigger: AATATCACACACGGAATCCTCATTCATTCCCCCAGGGAAACAGCACCTGTAGAAGACAAATCTGGTAGACACTACTGTGACAGGTGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS TCA 90 bp | TACAGTGATGTCCAAGGGCCTCACATTCACTCATCATTTACTCACTaGCTCACCCAGAGTAACTTCCAACCTGCAAGCTTTATTTATGGT | + |
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Preference number: 5 (lower is better) Translates to: YSDVQGPHIHSSFTH*LTQSNFQPASFIYG Trigger: ACCATAAATAAAGCTTGCAGGTTGGAAGTTACTCTGGGTGAGTCAGTGAGTAAATGATGAGTGAATGTGAGGCCCTTGGACATCACTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS TCA 90 bp | CAATGTATAGTTCAGTCTGGAAGCCAGCAGACTCAGGATACAAGATaGGCTGATTTTCAGTTTGAGTCGGAAGGCAGAAAAAGAACAATG | + |
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Preference number: 5 (lower is better) Translates to: QCIVQSGSQQTQDTR*ADFQFESEGRKRTM Trigger: CATTGTTCTTTTTCTGCCTTCCGACTCAAACTGAAAATCAGCTCATCTTGTATCCTGAGTCTGCTGGCTTCCAGACTGAACTATACATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS TCA 90 bp | ATTTTGGTGCCTCTTGTTTCCAGTCTTGTCTCCAATATCTCTAAGTaGCCTTTGGCAAGTCATTTCACCTCTCAGACTTGGTTAACTTTA | + |
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Preference number: 5 (lower is better) Translates to: ILVPLVSSLVSNISK*PLASHFTSQTWLTL Trigger: TAAAGTTAACCAAGTCTGAGAGGTGAAATGACTTGCCAAAGGTCACTTAGAGATATTGGAGACAAGACTGGAAACAAGAGGCACCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443261.2 |
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| CDS GCA 90 bp | TTACATGTGGGAAGAGGAACCACAGAGTTTTTACATAGAATTACATaGCCTACACTGGAGCTTATAAACAGCTTATCTTTAACGGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: LHVGRGTTEFLHRIT*PTLELINSLSLTGV Trigger: CACTCCCGTTAAAGATAAGCTGTTTATAAGCTCCAGTGTAGGGCATGTAATTCTATGTAAAAACTCTGTGGTTCCTCTTCCCACATGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443261.2 |
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| CDS CCA 72 bp | AGAGTGACAGTCTTGAGCCAGGCAAGGGCAGGCATGTaGCTCTCCCGACTGGTGGCCCATGCTCATGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: RVTVLSQARAGM*LSRLVAHAHGN Trigger: GTTTCCATGAGCATGGGCCACCAGTCGGGAGAGCCACATGCCTGCCCTTGCCTGGCTCAAGACTGTCACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CAA 90 bp | AGGCTAAGGGTCAGAGAGCGATATGAATCTGACAGAGTGACAGTCTaGAGCCAGGCAAGGGCAGGCATGTGGCTCTCCCGACTGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RLRVRERYESDRVTV*SQARAGMWLSRLVA Trigger: GGCCACCAGTCGGGAGAGCCACATGCCTGCCCTTGCCTGGCTCAAGACTGTCACTCTGTCAGATTCATATCGCTCTCTGACCCTTAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CCA 72 bp | TGGGCTTTCCATCTCTGTCACTGTATGCATGGAGCCTaGGAGGTGGGACAGATCTGTGGCAGGAGAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: WAFHLCHCMHGA*EVGQICGRRTG Trigger: CCCTGTTCTCCTGCCACAGATCTGTCCCACCTCCCAGGCTCCATGCATACAGTGACAGAGATGGAAAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS GCA 72 bp | AAGGGCAGGCATGTGGCTCTCCCGACTGGTGGCCCATaGTCATGGAAACCCAGATTTGAGGAAAAACTGTGG | + |
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Preference number: 6 (lower is better) Translates to: KGRHVALPTGGP*SWKPRFEEKLW Trigger: CCACAGTTTTTCCTCAAATCTGGGTTTCCATGAGCATGGGCCACCAGTCGGGAGAGCCACATGCCTGCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CCA 72 bp | AGGCATGTGGCTCTCCCGACTGGTGGCCCATGCTCATaGAAACCCAGATTTGAGGAAAAACTGTGGGAACTT | + |
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Preference number: 6 (lower is better) Translates to: RHVALPTGGPCS*KPRFEEKLWEL Trigger: AAGTTCCCACAGTTTTTCCTCAAATCTGGGTTTCCATGAGCATGGGCCACCAGTCGGGAGAGCCACATGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CAA 90 bp | TGGGACAGATCTGTGGCAGGAGAACAGGGGCCAGGAACCATCTCCTaGTCCTGTCCTATTCATCCTCAGAACTATAATGGACCCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: WDRSVAGEQGPGTIS*SCPIHPQNYNGPQQ Trigger: CTGTTGGGGTCCATTATAGTTCTGAGGATGAATAGGACAGGACAAGGAGATGGTTCCTGGCCCCTGTTCTCCTGCCACAGATCTGTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CAA 90 bp | ATGTGGCTCTCCCGACTGGTGGCCCATGCTCATGGAAACCCAGATTaGAGGAAAAACTGTGGGAACTTTCAGGTTGCTCTTCAAACTCTC | + |
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Preference number: 6 (lower is better) Translates to: MWLSRLVAHAHGNPD*RKNCGNFQVALQTL Trigger: GAGAGTTTGAAGAGCAACCTGAAAGTTCCCACAGTTTTTCCTCAAATCTGGGTTTCCATGAGCATGGGCCACCAGTCGGGAGAGCCACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CCA 72 bp | AGAAGTCCCAAGACCAGCAGTTGCAAGCTGGAAACCTaGGAGAGTCAATGTATAGTTCAGTCTGGAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RSPKTSSCKLET*ESQCIVQSGSQ Trigger: CTGGCTTCCAGACTGAACTATACATTGACTCTCCCAGGTTTCCAGCTTGCAACTGCTGGTCTTGGGACTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS GCA 72 bp | AGAACTATAATGGACCCCAACAGAGTAACCCGCCTTTaGAGAGGAACGAACTGTCTGAGCACTAGAAGACTC | + |
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Preference number: 6 (lower is better) Translates to: RTIMDPNRVTRL*RGTNCLSTRRL Trigger: GAGTCTTCTAGTGCTCAGACAGTTCGTTCCTCTGCAAAGGCGGGTTACTCTGTTGGGGTCCATTATAGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS GCA 72 bp | GTCACAGTAGTGTCTACCAGATTTGTCTTCTACAGGTaGTGTTTCCCTGGGGGAATGAATGAGGATTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: VTVVSTRFVFYR*CFPGGMNEDSV Trigger: CACGGAATCCTCATTCATTCCCCCAGGGAAACAGCACCTGTAGAAGACAAATCTGGTAGACACTACTGTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CCA 72 bp | TCAGCTACCACAAAGACTTGTGATAAGTCCTTTCTGTaGTCCTCTTTGAGACCAGCCCCTCCTCTTGATCAG | + |
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Preference number: 6 (lower is better) Translates to: SATTKTCDKSFL*SSLRPAPPLDQ Trigger: CTGATCAAGAGGAGGGGCTGGTCTCAAAGAGGACCACAGAAAGGACTTATCACAAGTCTTTGTGGTAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659638.1 |
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| CDS TCA 72 bp | CCCACTGGGGAGGGCGGTCTTCTTTACTCAGTCTACTaGTTCAATGTTAATCTCATCCAGAAACATCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: PTGEGGLLYSVY*FNVNLIQKHPH Trigger: GTGAGGATGTTTCTGGATGAGATTAACATTGAATCAGTAGACTGAGTAAAGAAGACCGCCCTCCCCAGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS TCA 72 bp | AAAGAACAATGTTCCAGCACCAGAAGTCAGGCAGCTTaGGATCACCGTATTTTGGGGGAGGTTCAGCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: KEQCSSTRSQAA*DHRILGEVQPF Trigger: AAAAGGCTGAACCTCCCCCAAAATACGGTGATCTCAAGCTGCCTGACTTCTGGTGCTGGAACATTGTTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS TCA 72 bp | GTCCAAGGGCCTCACATTCACTCATCATTTACTCACTaGCTCACCCAGAGTAACTTCCAACCTGCAAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: VQGPHIHSSFTH*LTQSNFQPASF Trigger: AAAGCTTGCAGGTTGGAAGTTACTCTGGGTGAGTCAGTGAGTAAATGATGAGTGAATGTGAGGCCCTTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS GCA 72 bp | ACTCTGGGACAGTTCCAGGGGAAAGGACTGTCACTCTaGTGCATAGTGACATCTTGTTTTGCAAATAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: TLGQFQGKGLSL*CIVTSCFANKC Trigger: GCACTTATTTGCAAAACAAGATGTCACTATGCAGCAGAGTGACAGTCCTTTCCCCTGGAACTGTCCCAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CCA 72 bp | CCATGCTCATGGAAACCCAGATTTGAGGAAAAACTGTaGGAACTTTCAGGTTGCTCTTCAAACTCTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PCSWKPRFEEKL*ELSGCSSNSPQ Trigger: CTGGGGAGAGTTTGAAGAGCAACCTGAAAGTTCCCACAGTTTTTCCTCAAATCTGGGTTTCCATGAGCATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CAA 72 bp | ATGATTATGGAGGCTGAGAAGTCCCAAGACCAGCAGTaGCAAGCTGGAAACCTGGGAGAGTCAATGTATAGT | + |
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Preference number: 6 (lower is better) Translates to: MIMEAEKSQDQQ*QAGNLGESMYS Trigger: ACTATACATTGACTCTCCCAGGTTTCCAGCTTGCAACTGCTGGTCTTGGGACTTCTCAGCCTCCATAATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CAA 90 bp | GTGAGAGGCACCCACAGCTGTGTCTCTGAGGGGCATCTTCATATTTaGCAGACTAGAAACTTCCATTATTGTCCTTTACTTAGGCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: VRGTHSCVSEGHLHI*QTRNFHYCPLLRLN Trigger: GTTGAGCCTAAGTAAAGGACAATAATGGAAGTTTCTAGTCTGCAAAATATGAAGATGCCCCTCAGAGACACAGCTGTGGGTGCCTCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451266.1 ENST00000456248.1 ENST00000658157.1 |
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| CDS CAA 90 bp | CTGGAAGCCAGCAGACTCAGGATACAAGATGAGCTGATTTTCAGTTaGAGTCGGAAGGCAGAAAAAGAACAATGTTCCAGCACCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: LEASRLRIQDELIFS*SRKAEKEQCSSTRS Trigger: ACTTCTGGTGCTGGAACATTGTTCTTTTTCTGCCTTCCGACTCAAACTGAAAATCAGCTCATCTTGTATCCTGAGTCTGCTGGCTTCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS TCA 72 bp | GATTTGTCTTCTACAGGTGCTGTTTCCCTGGGGGAATaGATGAGGATTCCGTGTGTGATATTCTGTGACTGT | + |
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Preference number: 6 (lower is better) Translates to: DLSSTGAVSLGE*MRIPCVIFCDC Trigger: ACAGTCACAGAATATCACACACGGAATCCTCATTCATTCCCCCAGGGAAACAGCACCTGTAGAAGACAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS TCA 72 bp | GTTCAGTCTGGAAGCCAGCAGACTCAGGATACAAGATaGGCTGATTTTCAGTTTGAGTCGGAAGGCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: VQSGSQQTQDTR*ADFQFESEGRK Trigger: TTTTCTGCCTTCCGACTCAAACTGAAAATCAGCTCATCTTGTATCCTGAGTCTGCTGGCTTCCAGACTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS TCA 72 bp | CTATATAGAAATTGGCTAATGCATGATTATGGAGGCTaGGAAGTCCCAAGACCAGCAGTTGCAAGCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: LYRNWLMHDYGG*EVPRPAVASWK Trigger: TTTCCAGCTTGCAACTGCTGGTCTTGGGACTTCTCAGCCTCCATAATCATGCATTAGCCAATTTCTATATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CAA 72 bp | AGCAGACTCAGGATACAAGATGAGCTGATTTTCAGTTaGAGTCGGAAGGCAGAAAAAGAACAATGTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SRLRIQDELIFS*SRKAEKEQCSS Trigger: GCTGGAACATTGTTCTTTTTCTGCCTTCCGACTCAAACTGAAAATCAGCTCATCTTGTATCCTGAGTCTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS TCA 72 bp | GTGTACAGTGTTTATAAAGTCTACAGTAGGGTACAGTaGTGTCCAAGGGCCTCACATTCACTCATCATTTAC | + |
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Preference number: 6 (lower is better) Translates to: VYSVYKVYSRVQ*CPRASHSLIIY Trigger: GTAAATGATGAGTGAATGTGAGGCCCTTGGACATCACTGTACCCTACTGTAGACTTTATAAACACTGTACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS GCA 72 bp | GTGCCTAATGACACATTTCTCAGAAGGTATGCCCACTaGTCAGTGATTCATGACTGTATATATATGCGTACA | + |
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Preference number: 6 (lower is better) Translates to: VPNDTFLRRYAH*SVIHDCIYMRT Trigger: TGTACGCATATATATACAGTCATGAATCACTGAGCAGTGGGCATACCTTCTGAGAAATGTGTCATTAGGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS CAA 90 bp | TACACTGGAGCTTATAAACAGCTTATCTTTAACGGGAGTGAAATATaGAATTTAAGATTGTGTGTGGCCTTCTCTACTCCCTTTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: YTGAYKQLIFNGSEI*NLRLCVAFSTPFPP Trigger: GGGAGGAAAGGGAGTAGAGAAGGCCACACACAATCTTAAATTCAATATTTCACTCCCGTTAAAGATAAGCTGTTTATAAGCTCCAGTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443261.2 |
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| CDS CAA 72 bp | TGTCCTGGTCCTAGTTATAAAGGCGCAAACTCGCACTaGTTAATAAAGACCATTGTATTCGAAAACCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: CPGPSYKGANSH*LIKTIVFENLV Trigger: AACCAGGTTTTCGAATACAATGGTCTTTATTAACAAGTGCGAGTTTGCGCCTTTATAACTAGGACCAGGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451266.1 |
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| CDS CAA 90 bp | GAGTTAAGTTGTCCTGGTCCTAGTTATAAAGGCGCAAACTCGCACTaGTTAATAAAGACCATTGTATTCGAAAACCTGGTTGAGGATTAT | + |
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Preference number: 6 (lower is better) Translates to: ELSCPGPSYKGANSH*LIKTIVFENLVEDY Trigger: ATAATCCTCAACCAGGTTTTCGAATACAATGGTCTTTATTAACAAGTGCGAGTTTGCGCCTTTATAACTAGGACCAGGACAACTTAACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451266.1 |
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| CDS CAA 72 bp | CCCTTACTACCTCACATCCACTACTGTACCTTCCAGTaGCCTCCAATTTTTCGGCATTTTATACATTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: PLLPHIHYCTFQ*PPIFRHFIHLK Trigger: TTTTAAATGTATAAAATGCCGAAAAATTGGAGGCAACTGGAAGGTACAGTAGTGGATGTGAGGTAGTAAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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| CDS GCA 72 bp | GGAAGAGGAACCACAGAGTTTTTACATAGAATTACATaGCCTACACTGGAGCTTATAAACAGCTTATCTTTA | + |
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Preference number: 6 (lower is better) Translates to: GRGTTEFLHRIT*PTLELINSLSL Trigger: TAAAGATAAGCTGTTTATAAGCTCCAGTGTAGGGCATGTAATTCTATGTAAAAACTCTGTGGTTCCTCTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443261.2 |
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| CDS CCA 72 bp | CAGAGAGCAGAATGTAGAGTGATCATGATTTACATGTaGGAAGAGGAACCACAGAGTTTTTACATAGAATTA | + |
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Preference number: 6 (lower is better) Translates to: QRAECRVIMIYM*EEEPQSFYIEL Trigger: TAATTCTATGTAAAAACTCTGTGGTTCCTCTTCCCACATGTAAATCATGATCACTCTACATTCTGCTCTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443261.2 |
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| CDS CAA 72 bp | GCTTATAAACAGCTTATCTTTAACGGGAGTGAAATATaGAATTTAAGATTGTGTGTGGCCTTCTCTACTCCC | + |
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Preference number: 6 (lower is better) Translates to: AYKQLIFNGSEI*NLRLCVAFSTP Trigger: GGGAGTAGAGAAGGCCACACACAATCTTAAATTCAATATTTCACTCCCGTTAAAGATAAGCTGTTTATAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443261.2 |
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| CDS CAA 72 bp | TTTACAATTGCCTACAGTATTCAGTACAGTAACAGGTaGTACAGGTTTGTAATCTACCAGCAACAAGTTATA | + |
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Preference number: 6 (lower is better) Translates to: FTIAYSIQYSNR*YRFVIYQQQVI Trigger: TATAACTTGTTGCTGGTAGATTACAAACCTGTACAACCTGTTACTGTACTGAATACTGTAGGCAATTGTAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456248.1 ENST00000658157.1 |
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