Pregenerated sensors for LINC01920 (Homo sapiens)
Ensembl gene IDs: ENSG00000236049Ensembl transcript IDs: ENST00000441356.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCAGCAAAGAGAGGGGTCCTGGACACAGGTTTCCATCTCACAAATTaGATACCAGGCCACCACACACAAGCTGGAGGCCAGGCTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SAKRGVLDTGFHLTN*IPGHHTQAGGQALP Trigger: GGGAAGAGCCTGGCCTCCAGCTTGTGTGTGGTGGCCTGGTATTCAATTTGTGAGATGGAAACCTGTGTCCAGGACCCCTCTCTTTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS GCA 90 bp | GAATACCAGGCCACCACACACAAGCTGGAGGCCAGGCTCTTCCCCTaGATAAGGAGCGAATTTTTGGTGGCTCTACCCTGTCTTTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: EYQATTHKLEARLFP*IRSEFLVALPCLSN Trigger: ATTGGAAAGACAGGGTAGAGCCACCAAAAATTCGCTCCTTATGCAGGGGAAGAGCCTGGCCTCCAGCTTGTGTGTGGTGGCCTGGTATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS TCA 90 bp | TCTGTTGCTTCTCAATGCCCAGGGAGACTGACTAGCCTTTGGGTCTaGATGACAATTCACCAGTGCGGCTCATGGGCCCATGTTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVASQCPGRLTSLWV*MTIHQCGSWAHVGS Trigger: TGAACCAACATGGGCCCATGAGCCGCACTGGTGAATTGTCATTCAGACCCAAAGGCTAGTCAGTCTCCCTGGGCATTGAGAAGCAACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS TCA 90 bp | GTGGCTTCCCTTAGTGGGGCTGAAATACATGGCAAAGAGTTGTCATaGGGACCATGTGTTTGGAGAGGGTTGTGTCTGCCTAGGAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VASLSGAEIHGKELS*GPCVWRGLCLPRSH Trigger: ATGACTCCTAGGCAGACACAACCCTCTCCAAACACATGGTCCTCATGACAACTCTTTGCCATGTATTTCAGCCCCACTAAGGGAAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS GCA 90 bp | ACGCATCTAATGTTGACTCCAGTCTATGTCCCTTGGTACCTGGGCTaGTTCTTGGCATCACAGGTTGAGTTGACAGTGGCTTCCCTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: THLMLTPVYVPWYLG*FLASQVELTVASLS Trigger: ACTAAGGGAAGCCACTGTCAACTCAACCTGTGATGCCAAGAAGCAGCCCAGGTACCAAGGGACATAGACTGGAGTCAACATTAGATGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CCA 90 bp | CTGAGCTGCAACTCCTCCCCCATCCTCTTCTCCAACATTCTGAGGTaGTTTCCCTATTATTTCCACTGCCAGCCAGCAGATTTTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LSCNSSPILFSNILR*FPYYFHCQPADFPL Trigger: AAGTGGAAAATCTGCTGGCTGGCAGTGGAAATAATAGGGAAACCACCTCAGAATGTTGGAGAAGAGGATGGGGGAGGAGTTGCAGCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS TCA 90 bp | TATTTCCACTGCCAGCCAGCAGATTTTCCACTTGCAGAAAGGAGATaGGAAAAACTGAACCGTGGTCTAGCCAGCTTGCCTTCCCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: YFHCQPADFPLAERR*EKLNRGLASLPSLT Trigger: AGTCAGGGAAGGCAAGCTGGCTAGACCACGGTTCAGTTTTTCTCATCTCCTTTCTGCAAGTGGAAAATCTGCTGGCTGGCAGTGGAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CCA 90 bp | CACCATACAGAAACGCATCTAATGTTGACTCCAGTCTATGTCCCTTaGTACCTGGGCTGCTTCTTGGCATCACAGGTTGAGTTGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HHTETHLMLTPVYVP*YLGCFLASQVELTV Trigger: CACTGTCAACTCAACCTGTGATGCCAAGAAGCAGCCCAGGTACCAAGGGACATAGACTGGAGTCAACATTAGATGCGTTTCTGTATGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS GCA 90 bp | CCTTCCCTGACTAGTTCTTTGTCTGATAGAAGGGAAACTTCTGTCTaGTACAGCATATTATTGCGGAATTGTGCTGTAAACATCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSLTSSLSDRRETSV*YSILLRNCAVNILL Trigger: GAGGAGGATGTTTACAGCACAATTCCGCAATAATATGCTGTAGCAGACAGAAGTTTCCCTTCTATCAGACAAAGAACTAGTCAGGGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS GCA 90 bp | TTTACGATGGAACATCCACTCTTGGGCGTTTCCTTGAACTCACATTaGAAAGAAAGAAAGTTCTTCACATTTTCATGCCACGAATGGATA | + |
|
Preference number: 5 (lower is better) Translates to: FTMEHPLLGVSLNSH*KERKFFTFSCHEWI Trigger: TATCCATTCGTGGCATGAAAATGTGAAGAACTTTCTTTCTTTGCAATGTGAGTTCAAGGAAACGCCCAAGAGTGGATGTTCCATCGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS TCA 72 bp | ACCATGGGCATGTTTAGGCAAAACCCTGGTGCACAATaGCCTGGGCAGGTCAGAGGTTCTCCAGGGACACCC | + |
|
Preference number: 6 (lower is better) Translates to: TMGMFRQNPGAQ*PGQVRGSPGTP Trigger: GGGTGTCCCTGGAGAACCTCTGACCTGCCCAGGTCATTGTGCACCAGGGTTTTGCCTAAACATGCCCATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS GCA 72 bp | GCCACCACACACAAGCTGGAGGCCAGGCTCTTCCCCTaGATAAGGAGCGAATTTTTGGTGGCTCTACCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ATTHKLEARLFP*IRSEFLVALPC Trigger: ACAGGGTAGAGCCACCAAAAATTCGCTCCTTATGCAGGGGAAGAGCCTGGCCTCCAGCTTGTGTGTGGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 90 bp | GTCAGCAAAGAGAGGGGTCCTGGACACAGGTTTCCATCTCACAAATaGAATACCAGGCCACCACACACAAGCTGGAGGCCAGGCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSKERGPGHRFPSHK*NTRPPHTSWRPGSS Trigger: GGAAGAGCCTGGCCTCCAGCTTGTGTGTGGTGGCCTGGTATTCAATTTGTGAGATGGAAACCTGTGTCCAGGACCCCTCTCTTTGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS TCA 72 bp | TCTCAATGCCCAGGGAGACTGACTAGCCTTTGGGTCTaGATGACAATTCACCAGTGCGGCTCATGGGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SQCPGRLTSLWV*MTIHQCGSWAH Trigger: ATGGGCCCATGAGCCGCACTGGTGAATTGTCATTCAGACCCAAAGGCTAGTCAGTCTCCCTGGGCATTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS TCA 72 bp | AGAGGGGTCCTGGACACAGGTTTCCATCTCACAAATTaGATACCAGGCCACCACACACAAGCTGGAGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGVLDTGFHLTN*IPGHHTQAGGQ Trigger: CTGGCCTCCAGCTTGTGTGTGGTGGCCTGGTATTCAATTTGTGAGATGGAAACCTGTGTCCAGGACCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS GCA 72 bp | GGGCAGGTCAGAGGTTCTCCAGGGACACCCCTTATCTaGCTAGGCATTTGTCTGTCTCTTGCCACTATCCTA | + |
|
Preference number: 6 (lower is better) Translates to: GQVRGSPGTPLI*LGICLSLATIL Trigger: TAGGATAGTGGCAAGAGACAGACAAATGCCTAGGCAGATAAGGGGTGTCCCTGGAGAACCTCTGACCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 72 bp | GAGGCCAGGCTCTTCCCCTGCATAAGGAGCGAATTTTaGGTGGCTCTACCCTGTCTTTCCAATGTGCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: EARLFPCIRSEF*VALPCLSNVPA Trigger: TGCAGGCACATTGGAAAGACAGGGTAGAGCCACCAAAAATTCGCTCCTTATGCAGGGGAAGAGCCTGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 72 bp | GAGAGGGGTCCTGGACACAGGTTTCCATCTCACAAATaGAATACCAGGCCACCACACACAAGCTGGAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ERGPGHRFPSHK*NTRPPHTSWRP Trigger: TGGCCTCCAGCTTGTGTGTGGTGGCCTGGTATTCAATTTGTGAGATGGAAACCTGTGTCCAGGACCCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 72 bp | ACTCCAGTCTATGTCCCTTGGTACCTGGGCTGCTTCTaGGCATCACAGGTTGAGTTGACAGTGGCTTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TPVYVPWYLGCF*ASQVELTVASL Trigger: AAGGGAAGCCACTGTCAACTCAACCTGTGATGCCAAGAAGCAGCCCAGGTACCAAGGGACATAGACTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 90 bp | CTAATGTTGACTCCAGTCTATGTCCCTTGGTACCTGGGCTGCTTCTaGGCATCACAGGTTGAGTTGACAGTGGCTTCCCTTAGTGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LMLTPVYVPWYLGCF*ASQVELTVASLSGA Trigger: AGCCCCACTAAGGGAAGCCACTGTCAACTCAACCTGTGATGCCAAGAAGCAGCCCAGGTACCAAGGGACATAGACTGGAGTCAACATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 90 bp | TATGTCCCTTGGTACCTGGGCTGCTTCTTGGCATCACAGGTTGAGTaGACAGTGGCTTCCCTTAGTGGGGCTGAAATACATGGCAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: YVPWYLGCFLASQVE*TVASLSGAEIHGKE Trigger: CTCTTTGCCATGTATTTCAGCCCCACTAAGGGAAGCCACTGTCAACTCAACCTGTGATGCCAAGAAGCAGCCCAGGTACCAAGGGACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS TCA 72 bp | TCTTCCTCTCCCCACATGTCTTCTTTGAAGGATTCCTaGGCTGCAACTCCTCCCCCATCCTCTTCTCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: SSSPHMSSLKDS*AATPPPSSSPT Trigger: TGTTGGAGAAGAGGATGGGGGAGGAGTTGCAGCTCAGGAATCCTTCAAAGAAGACATGTGGGGAGAGGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS GCA 72 bp | ATGTTGACTCCAGTCTATGTCCCTTGGTACCTGGGCTaGTTCTTGGCATCACAGGTTGAGTTGACAGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: MLTPVYVPWYLG*FLASQVELTVA Trigger: AGCCACTGTCAACTCAACCTGTGATGCCAAGAAGCAGCCCAGGTACCAAGGGACATAGACTGGAGTCAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 72 bp | TGGTACCTGGGCTGCTTCTTGGCATCACAGGTTGAGTaGACAGTGGCTTCCCTTAGTGGGGCTGAAATACAT | + |
|
Preference number: 6 (lower is better) Translates to: WYLGCFLASQVE*TVASLSGAEIH Trigger: ATGTATTTCAGCCCCACTAAGGGAAGCCACTGTCAACTCAACCTGTGATGCCAAGAAGCAGCCCAGGTACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CCA 72 bp | GAAACGCATCTAATGTTGACTCCAGTCTATGTCCCTTaGTACCTGGGCTGCTTCTTGGCATCACAGGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ETHLMLTPVYVP*YLGCFLASQVE Trigger: CTCAACCTGTGATGCCAAGAAGCAGCCCAGGTACCAAGGGACATAGACTGGAGTCAACATTAGATGCGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 72 bp | TCCTCCAAGCTACACCATACAGAAACGCATCTAATGTaGACTCCAGTCTATGTCCCTTGGTACCTGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSKLHHTETHLM*TPVYVPWYLGC Trigger: GCAGCCCAGGTACCAAGGGACATAGACTGGAGTCAACATTAGATGCGTTTCTGTATGGTGTAGCTTGGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 72 bp | GCTGGGGGCAGAGCATTTACGATGGAACATCCACTCTaGGGCGTTTCCTTGAACTCACATTGCAAAGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: AGGRAFTMEHPL*GVSLNSHCKER Trigger: TCTTTCTTTGCAATGTGAGTTCAAGGAAACGCCCAAGAGTGGATGTTCCATCGTAAATGCTCTGCCCCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 72 bp | AGGTTCTCCAGGGACACCCCTTATCTGCCTAGGCATTaGTCTGTCTCTTGCCACTATCCTATCTGCATATTT | + |
|
Preference number: 6 (lower is better) Translates to: RFSRDTPYLPRH*SVSCHYPICIF Trigger: AAATATGCAGATAGGATAGTGGCAAGAGACAGACAAATGCCTAGGCAGATAAGGGGTGTCCCTGGAGAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 90 bp | TCCAACTCTGGGGCTAGAAAATTAGTCTGTAATCAAAGAACATACTaGCTTTCTGTTGCTTCTCAATGCCCAGGGAGACTGACTAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SNSGARKLVCNQRTY*LSVASQCPGRLTSL Trigger: AAGGCTAGTCAGTCTCCCTGGGCATTGAGAAGCAACAGAAAGCAAGTATGTTCTTTGATTACAGACTAATTTTCTAGCCCCAGAGTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS GCA 72 bp | AACTTCTGTCTGCTACAGCATATTATTGCGGAATTGTaGTGTAAACATCCTCCTCCAAGCTACACCATACAG | + |
|
Preference number: 6 (lower is better) Translates to: NFCLLQHIIAEL*CKHPPPSYTIQ Trigger: CTGTATGGTGTAGCTTGGAGGAGGATGTTTACAGCACAATTCCGCAATAATATGCTGTAGCAGACAGAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 72 bp | GGAAACTTCTGTCTGCTACAGCATATTATTGCGGAATaGTGCTGTAAACATCCTCCTCCAAGCTACACCATA | + |
|
Preference number: 6 (lower is better) Translates to: GNFCLLQHIIAE*CCKHPPPSYTI Trigger: TATGGTGTAGCTTGGAGGAGGATGTTTACAGCACAATTCCGCAATAATATGCTGTAGCAGACAGAAGTTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 72 bp | GATAGAAGGGAAACTTCTGTCTGCTACAGCATATTATaGCGGAATTGTGCTGTAAACATCCTCCTCCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: DRRETSVCYSIL*RNCAVNILLQA Trigger: AGCTTGGAGGAGGATGTTTACAGCACAATTCCGCAATAATATGCTGTAGCAGACAGAAGTTTCCCTTCTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 90 bp | TCTTTGTCTGATAGAAGGGAAACTTCTGTCTGCTACAGCATATTATaGCGGAATTGTGCTGTAAACATCCTCCTCCAAGCTACACCATAC | + |
|
Preference number: 6 (lower is better) Translates to: SLSDRRETSVCYSIL*RNCAVNILLQATPY Trigger: GTATGGTGTAGCTTGGAGGAGGATGTTTACAGCACAATTCCGCAATAATATGCTGTAGCAGACAGAAGTTTCCCTTCTATCAGACAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS TCA 72 bp | AGAAGAAGCTTAATAGGTAATGAATTATTAAGTGTATaGGTTCCACGTGGCTGGGGAGGCCTCATAATCACG | + |
|
Preference number: 6 (lower is better) Translates to: RRSLIGNELLSV*VPRGWGGLIIT Trigger: CGTGATTATGAGGCCTCCCCAGCCACGTGGAACTCATACACTTAATAATTCATTACCTATTAAGCTTCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS TCA 72 bp | ATTTTGCCTCAGGCTAGATCTGAAGTACTAACCCACTaGGTTATACTTCTGAAGTTTAGGAGAGTGCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ILPQARSEVLTH*VILLKFRRVLC Trigger: ACACAGCACTCTCCTAAACTTCAGAAGTATAACTCAGTGGGTTAGTACTTCAGATCTAGCCTGAGGCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 72 bp | CCAACAACAATAATCCTGCCACCTAGGACATCAGGATaGCATTTTCAGTATACATTACCTGGGGCATTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PTTIILPPRTSG*HFQYTLPGAFV Trigger: AACAAATGCCCCAGGTAATGTATACTGAAAATGCAATCCTGATGTCCTAGGTGGCAGGATTATTGTTGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||
| CDS CAA 72 bp | GTTAGTATATTTGGCACAGCAGAGAGTTGTCCATCATaGAAAAGAGAGACGATGAATGTTGCTTCTAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: VSIFGTAESCPS*KRETMNVASRN Trigger: ATTCCTAGAAGCAACATTCATCGTCTCTCTTTTCAATGATGGACAACTCTCTGCTGTGCCAAATATACTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441356.1 |
||