Pregenerated sensors for LINC01919 (Homo sapiens)
Ensembl gene IDs: ENSG00000263438Ensembl transcript IDs: ENST00000578610.5, ENST00000579506.2, ENST00000581198.2, ENST00000654465.1, ENST00000655896.1, ENST00000658566.1, ENST00000663332.1, ENST00000665439.1, ENST00000667052.1, ENST00000669727.1, ENST00000671590.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCCTTTTGCAGCCCAGCACATGGTCCCCAGTTTAGATCCTCTGCATaGAACCATGCTGCCTTGGAAGCAAGTCACACTGTGGTGATATTC | + |
|
Preference number: 5 (lower is better) Translates to: PFCSPAHGPQFRSSA*NHAALEASHTVVIF Trigger: GAATATCACCACAGTGTGACTTGCTTCCAAGGCAGCATGGTTTCATGCAGAGGATCTAAACTGGGGACCATGTGCTGGGCTGCAAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000578610.5 ENST00000581198.2 ENST00000654465.1 ENST00000655896.1 ENST00000658566.1 ENST00000663332.1 ENST00000665439.1 ENST00000671590.1 |
||
| CDS GCA 90 bp | ACATGCCTAACACCTTTCCTTTTCTCCACTCTAAAGCTTCCCCACTaGTTTGTCTGCCTTTCAGCCTCTGACAAGTTGAAGTGGTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TCLTPFLFSTLKLPH*FVCLSASDKLKWWH Trigger: ATGCCACCACTTCAACTTGTCAGAGGCTGAAAGGCAGACAAAGCAGTGGGGAAGCTTTAGAGTGGAGAAAAGGAAAGGTGTTAGGCATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS GCA 90 bp | GGAAATGACATTCTAGTTGAGGAGAAAGGAGATTGTCAATCACTGTaGCTCCTTCCTAGCTCTTCAAATATGGCTAGCTCCAGGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GNDILVEEKGDCQSL*LLPSSSNMASSRLH Trigger: ATGCAGCCTGGAGCTAGCCATATTTGAAGAGCTAGGAAGGAGGCACAGTGATTGACAATCTCCTTTCTCCTCAACTAGAATGTCATTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579506.2 ENST00000655896.1 ENST00000669727.1 |
||
| CDS CCA 90 bp | GCCAGCACAAGTATCACCTGGGACCAAGTTAGAAATGCAAAATTTTaGCTCCCACTGCAGACCTACTCTGGAGATCTGATATACTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASTSITWDQVRNAKF*LPLQTYSGDLIYFE Trigger: CTCAAAGTATATCAGATCTCCAGAGTAGGTCTGCAGTGGGAGCCAAAATTTTGCATTTCTAACTTGGTCCCAGGTGATACTTGTGCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000579506.2 ENST00000655896.1 |
||
| CDS CCA 90 bp | TCACTGTCTTCCACCTCCACATCTTGTCTCACTGGAAGATCTTCATaGCTAGTAACACCTGTGGAACTGTCATCTTCTACCACAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSTSTSCLTGRSS*LVTPVELSSSTTTM Trigger: CATTGTTGTGGTAGAAGATGACAGTTCCACAGGTGTTACTAGCCATGAAGATCTTCCAGTGAGACAAGATGTGGAGGTGGAAGACAGTGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654465.1 ENST00000655896.1 ENST00000658566.1 ENST00000665439.1 ENST00000667052.1 ENST00000671590.1 |
||
| CDS TCA 90 bp | GACAAGTTGAAGTGGTGGCATGGATGCCCTTGCTGTAGCAAGCTCTaGATACATAGCTTATGTTTGTTCTCATTTGGATGGTCTTTATTT | + |
|
Preference number: 5 (lower is better) Translates to: DKLKWWHGCPCCSKL*IHSLCLFSFGWSLF Trigger: AAATAAAGACCATCCAAATGAGAACAAACATAAGCTATGTATTCAGAGCTTGCTACAGCAAGGGCATCCATGCCACCACTTCAACTTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS TCA 90 bp | TGGAGTCAGAGATGGCTTGCTTTTGCTGACATCCTTGTAAGCTCTTaGGAAACTGAATTAGAAACAGATAACCGTCATTCTATGTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: WSQRWLAFADILVSS*ETELETDNRHSMCN Trigger: ATTACACATAGAATGACGGTTATCTGTTTCTAATTCAGTTTCTCAAGAGCTTACAAGGATGTCAGCAAAAGCAAGCCATCTCTGACTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS CCA 90 bp | TCAGATGCCCAATATAGACATGGGGCTGACATAACTGAACTGAGATaGGGCTACATTGTACTAATTAGAAATCTATTTGAATGCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SDAQYRHGADITELR*GYIVLIRNLFECQF Trigger: AAACTGGCATTCAAATAGATTTCTAATTAGTACAATGTAGCCCCATCTCAGTTCAGTTATGTCAGCCCCATGTCTATATTGGGCATCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669727.1 |
||
| CDS TCA 72 bp | CCCACTGCTTTGTCTGCCTTTCAGCCTCTGACAAGTTaGAGTGGTGGCATGGATGCCCTTGCTGTAGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PTALSAFQPLTS*SGGMDALAVAS Trigger: GCTTGCTACAGCAAGGGCATCCATGCCACCACTTCAACTTGTCAGAGGCTGAAAGGCAGACAAAGCAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS CAA 72 bp | CCCCACTGCTTTGTCTGCCTTTCAGCCTCTGACAAGTaGAAGTGGTGGCATGGATGCCCTTGCTGTAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PHCFVCLSASDK*KWWHGCPCCSK Trigger: CTTGCTACAGCAAGGGCATCCATGCCACCACTTCAACTTGTCAGAGGCTGAAAGGCAGACAAAGCAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS CAA 72 bp | ATAAGTAGAAGGTGTGCACTATCGCCCACCCCAAGTTaGGAAGGCATCCTTGTGCCTGCGTCTCCAGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ISRRCALSPTPS*EGILVPASPEV Trigger: GACCTCTGGAGACGCAGGCACAAGGATGCCTTCCAAACTTGGGGTGGGCGATAGTGCACACCTTCTACTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667052.1 |
||
| CDS TCA 72 bp | AAAGCTTCCCCACTGCTTTGTCTGCCTTTCAGCCTCTaGCAAGTTGAAGTGGTGGCATGGATGCCCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KASPLLCLPFSL*QVEVVAWMPLL Trigger: CAGCAAGGGCATCCATGCCACCACTTCAACTTGTCAGAGGCTGAAAGGCAGACAAAGCAGTGGGGAAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS TCA 72 bp | AGCCCAGCACATGGTCCCCAGTTTAGATCCTCTGCATaGAACCATGCTGCCTTGGAAGCAAGTCACACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SPAHGPQFRSSA*NHAALEASHTV Trigger: CACAGTGTGACTTGCTTCCAAGGCAGCATGGTTTCATGCAGAGGATCTAAACTGGGGACCATGTGCTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000578610.5 ENST00000581198.2 ENST00000654465.1 ENST00000655896.1 ENST00000658566.1 ENST00000663332.1 ENST00000665439.1 ENST00000671590.1 |
||
| CDS GCA 72 bp | CTTTTCTCCACTCTAAAGCTTCCCCACTGCTTTGTCTaGCTTTCAGCCTCTGACAAGTTGAAGTGGTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LFSTLKLPHCFV*LSASDKLKWWH Trigger: ATGCCACCACTTCAACTTGTCAGAGGCTGAAAGGCAGACAAAGCAGTGGGGAAGCTTTAGAGTGGAGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS TCA 72 bp | AATTTTGGCTCCCACTGCAGACCTACTCTGGAGATCTaGTATACTTTGAGAACCATGGCTCTGAAGCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: NFGSHCRPTLEI*YTLRTMALKQT Trigger: AGTCTGCTTCAGAGCCATGGTTCTCAAAGTATATCAGATCTCCAGAGTAGGTCTGCAGTGGGAGCCAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000579506.2 ENST00000655896.1 |
||
| CDS CAA 72 bp | AAACAGAACTCTGGCCCACAGACTCTGCAGCAACCATaGCAGGAAACCAGTTACAATCTCTTAAGATTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KQNSGPQTLQQP*QETSYNLLRLV Trigger: GACCAATCTTAAGAGATTGTAACTGGTTTCCTGCAATGGTTGCTGCAGAGTCTGTGGGCCAGAGTTCTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS TCA 72 bp | AAGTGGTGGCATGGATGCCCTTGCTGTAGCAAGCTCTaGATACATAGCTTATGTTTGTTCTCATTTGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: KWWHGCPCCSKL*IHSLCLFSFGW Trigger: CCATCCAAATGAGAACAAACATAAGCTATGTATTCAGAGCTTGCTACAGCAAGGGCATCCATGCCACCACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS GCA 72 bp | ATTCTAGTTGAGGAGAAAGGAGATTGTCAATCACTGTaGCTCCTTCCTAGCTCTTCAAATATGGCTAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ILVEEKGDCQSL*LLPSSSNMASS Trigger: GGAGCTAGCCATATTTGAAGAGCTAGGAAGGAGGCACAGTGATTGACAATCTCCTTTCTCCTCAACTAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579506.2 ENST00000655896.1 ENST00000669727.1 |
||
| CDS GCA 72 bp | CTATGTGTAATAAACAGAACTCTGGCCCACAGACTCTaGAGCAACCATTGCAGGAAACCAGTTACAATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LCVINRTLAHRL*SNHCRKPVTIS Trigger: AGAGATTGTAACTGGTTTCCTGCAATGGTTGCTGCAGAGTCTGTGGGCCAGAGTTCTGTTTATTACACATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS CAA 90 bp | ATGTGTAATAAACAGAACTCTGGCCCACAGACTCTGCAGCAACCATaGCAGGAAACCAGTTACAATCTCTTAAGATTGGTCCAGAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: MCNKQNSGPQTLQQP*QETSYNLLRLVQNG Trigger: ACCATTCTGGACCAATCTTAAGAGATTGTAACTGGTTTCCTGCAATGGTTGCTGCAGAGTCTGTGGGCCAGAGTTCTGTTTATTACACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS CAA 90 bp | AACAGGATCAGAATCATCAATATCACTGTCTTCCACCTCCACATCTaGTCTCACTGGAAGATCTTCATGGCTAGTAACACCTGTGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: NRIRIINITVFHLHI*SHWKIFMASNTCGT Trigger: AGTTCCACAGGTGTTACTAGCCATGAAGATCTTCCAGTGAGACAAGATGTGGAGGTGGAAGACAGTGATATTGATGATTCTGATCCTGTT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654465.1 ENST00000655896.1 ENST00000658566.1 ENST00000665439.1 ENST00000667052.1 ENST00000671590.1 |
||
| CDS CAA 72 bp | ACCATGGCTCTGAAGCAGACTATCCTGGACGGGCTCTaGAAATTCTCTGAGGCTTACTTTCTTCATATATAT | + |
|
Preference number: 6 (lower is better) Translates to: TMALKQTILDGL*KFSEAYFLHIY Trigger: ATATATATGAAGAAAGTAAGCCTCAGAGAATTTCAAGAGCCCGTCCAGGATAGTCTGCTTCAGAGCCATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579506.2 ENST00000655896.1 ENST00000669727.1 |
||
| CDS CAA 72 bp | AGAATCATCAATATCACTGTCTTCCACCTCCACATCTaGTCTCACTGGAAGATCTTCATGGCTAGTAACACC | + |
|
Preference number: 6 (lower is better) Translates to: RIINITVFHLHI*SHWKIFMASNT Trigger: GGTGTTACTAGCCATGAAGATCTTCCAGTGAGACAAGATGTGGAGGTGGAAGACAGTGATATTGATGATTCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654465.1 ENST00000655896.1 ENST00000658566.1 ENST00000665439.1 ENST00000667052.1 ENST00000671590.1 |
||
| CDS TCA 72 bp | GAAGCAGACTATCCTGGACGGGCTCTTGAAATTCTCTaGGGCTTACTTTCTTCATATATATACAACGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: EADYPGRALEIL*GLLSSYIYNVV Trigger: AACTACGTTGTATATATATGAAGAAAGTAAGCCTCAGAGAATTTCAAGAGCCCGTCCAGGATAGTCTGCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579506.2 ENST00000655896.1 ENST00000669727.1 |
||
| CDS TCA 72 bp | AGATGGCTTGCTTTTGCTGACATCCTTGTAAGCTCTTaGGAAACTGAATTAGAAACAGATAACCGTCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: RWLAFADILVSS*ETELETDNRHS Trigger: AGAATGACGGTTATCTGTTTCTAATTCAGTTTCTCAAGAGCTTACAAGGATGTCAGCAAAAGCAAGCCATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS GCA 72 bp | TCCAGTGCTATCATGACAATGACCTCAATTAAAACATaGCTAACACCTTTCCTTTTCTCCACTCTAAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSAIMTMTSIKT*LTPFLFSTLKL Trigger: AAGCTTTAGAGTGGAGAAAAGGAAAGGTGTTAGGCATGTTTTAATTGAGGTCATTGTCATGATAGCACTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS CAA 72 bp | GCAAGCTCTGAATACATAGCTTATGTTTGTTCTCATTaGGATGGTCTTTATTTCCACATGCCCTATCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ASSEYIAYVCSH*DGLYFHMPYLP Trigger: AGGAAGATAGGGCATGTGGAAATAAAGACCATCCAAATGAGAACAAACATAAGCTATGTATTCAGAGCTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579506.2 |
||
| CDS CCA 72 bp | CAATATAGACATGGGGCTGACATAACTGAACTGAGATaGGGCTACATTGTACTAATTAGAAATCTATTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QYRHGADITELR*GYIVLIRNLFE Trigger: TTCAAATAGATTTCTAATTAGTACAATGTAGCCCCATCTCAGTTCAGTTATGTCAGCCCCATGTCTATATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669727.1 |
||