Pregenerated sensors for LINC01916 (Homo sapiens)

Ensembl gene IDs: ENSG00000264232

Ensembl transcript IDs: ENST00000582028.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AATCTGCTGAATGGCATGAGTGCACGGCCAAGGCTGGTGGGGGAGTaGCTAGCCACAGCCAGCTCGTCTGTTCAGGCCTCCAGGGCTGAA	+
Preference number: 5 (lower is better) Translates to: NLLNGMSARPRLVGE*LATASSSVQASRAE Trigger: TTCAGCCCTGGAGGCCTGAACAGACGAGCTGGCTGTGGCTAGTCACTCCCCCACCAGCCTTGGCCGTGCACTCATGCCATTCAGCAGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000582028.2
CDS CCA 90 bp	GAGGTAGCTCGTAACATGAAAGCTGGCTTCATCAAATCTGCTGAATaGCATGAGTGCACGGCCAAGGCTGGTGGGGGAGTGACTAGCCAC	+
Preference number: 5 (lower is better) Translates to: EVARNMKAGFIKSAE*HECTAKAGGGVTSH Trigger: GTGGCTAGTCACTCCCCCACCAGCCTTGGCCGTGCACTCATGCCATTCAGCAGATTTGATGAAGCCAGCTTTCATGTTACGAGCTACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000582028.2
CDS CCA 72 bp	CGTAACATGAAAGCTGGCTTCATCAAATCTGCTGAATaGCATGAGTGCACGGCCAAGGCTGGTGGGGGAGTG	+
Preference number: 6 (lower is better) Translates to: RNMKAGFIKSAE*HECTAKAGGGV Trigger: CACTCCCCCACCAGCCTTGGCCGTGCACTCATGCCATTCAGCAGATTTGATGAAGCCAGCTTTCATGTTACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000582028.2
CDS TCA 72 bp	CAAAATGTCAGCTGGGATTGCAGTCATGTCAGGCCTTaGTGGGGGTGGGATCTGATTCCAAGGTCATGCATA	+
Preference number: 6 (lower is better) Translates to: QNVSWDCSHVRP*WGWDLIPRSCI Trigger: TATGCATGACCTTGGAATCAGATCCCACCCCCATCAAGGCCTGACATGACTGCAATCCCAGCTGACATTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000582028.2
CDS TCA 72 bp	GTGCCTAGCTTAACTGGGTCCTCTGGGACTCTTACATaGCTACAATCAAAATGTCAGCTGGGATTGCAGTCA	+
Preference number: 6 (lower is better) Translates to: VPSLTGSSGTLT*LQSKCQLGLQS Trigger: TGACTGCAATCCCAGCTGACATTTTGATTGTAGTCATGTAAGAGTCCCAGAGGACCCAGTTAAGCTAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582028.2

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