Pregenerated sensors for LINC01912 (Homo sapiens)
Ensembl gene IDs: ENSG00000264699Ensembl transcript IDs: ENST00000581844.1, ENST00000657287.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCATACACCTAGGCTTGAAAGTGACGGATGTGACTTCTTCGTTCTaGATTGCTTTTTCTAGAGCCTTCCCTCTCCGCCTTCAGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LIHLGLKVTDVTSSF*IAFSRAFPLRLQLG Trigger: TCCAAGCTGAAGGCGGAGAGGGAAGGCTCTAGAAAAAGCAATGCAGAACGAAGAAGTCACATCCGTCACTTTCAAGCCTAGGTGTATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||
| CDS GCA 90 bp | ACTTATTTCTTCTCTCTCCAGGGTTTGGTTAAAGTGCCTCTGGGATaGTTCTTGCTCCGATTGAAACTCGAATCTCCCCTGAGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TYFFSLQGLVKVPLG*FLLRLKLESPLRML Trigger: CAGCATCCTCAGGGGAGATTCGAGTTTCAATCGGAGCAAGAAGCATCCCAGAGGCACTTTAACCAAACCCTGGAGAGAGAAGAAATAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581844.1 ENST00000657287.1 |
||
| CDS TCA 90 bp | AAGGCCCATCCAGAGGCAAGGAGTAAGAAAATGGCTTCTGTTTACTaGTGGGAAGAACCGCAAAGTCACATTGTAACAAACCATGGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KAHPEARSKKMASVY*WEEPQSHIVTNHGY Trigger: ATACCCATGGTTTGTTACAATGTGACTTTGCGGTTCTTCCCATCAGTAAACAGAAGCCATTTTCTTACTCCTTGCCTCTGGATGGGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581844.1 ENST00000657287.1 |
||
| CDS TCA 90 bp | CTTGTTGCCAGTAGCACTGACTGTGGTTTACTCCTCCTTATTCCTTaGAATCTTATGTCTGTGCTCACTCTATTTCTCTCCAACACAACT | + |
|
Preference number: 5 (lower is better) Translates to: LVASSTDCGLLLLIP*NLMSVLTLFLSNTT Trigger: AGTTGTGTTGGAGAGAAATAGAGTGAGCACAGACATAAGATTTCAAGGAATAAGGAGGAGTAAACCACAGTCAGTGCTACTGGCAACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||
| CDS CCA 90 bp | ATCCTTCATTATTTCACTGTACACCTGTGTGGCCTTTCCAAATCCTaGAATCTATGTTATTTGGCACCTTCAAACTCACCTGAGAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: ILHYFTVHLCGLSKS*NLCYLAPSNSPEKI Trigger: AATCTTCTCAGGTGAGTTTGAAGGTGCCAAATAACATAGATTCCAGGATTTGGAAAGGCCACACAGGTGTACAGTGAAATAATGAAGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||
| CDS CCA 90 bp | CCAACACAACTTTTAAATCCTTCATTATTTCACTGTACACCTGTGTaGCCTTTCCAAATCCTGGAATCTATGTTATTTGGCACCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PTQLLNPSLFHCTPV*PFQILESMLFGTFK Trigger: TTTGAAGGTGCCAAATAACATAGATTCCAGGATTTGGAAAGGCCACACAGGTGTACAGTGAAATAATGAAGGATTTAAAAGTTGTGTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||
| CDS GCA 72 bp | ATGCTGATTCTCCAACAGGCTTCTCAGGGATGCCTGTaGTTTCCTCCCCCACACCTCATACACCTAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: MLILQQASQGCL*FPPPHLIHLGW Trigger: CCAGCCTAGGTGTATGAGGTGTGGGGGAGGAAAGCACAGGCATCCCTGAGAAGCCTGTTGGAGAATCAGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000581844.1 |
||
| CDS GCA 72 bp | CTGAGGATGCTGATTCTCCAACAGGCTTCTCAGGGATaGCTGTGCTTTCCTCCCCCACACCTCATACACCTA | + |
|
Preference number: 6 (lower is better) Translates to: LRMLILQQASQG*LCFPPPHLIHL Trigger: TAGGTGTATGAGGTGTGGGGGAGGAAAGCACAGGCATCCCTGAGAAGCCTGTTGGAGAATCAGCATCCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000581844.1 ENST00000657287.1 |
||
| CDS GCA 72 bp | ATGCTGATTCTCCAACAGGCTTCTCAGGGATGCCTGTaGTTTCCTCCCCCACACCTCATACACCTAGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MLILQQASQGCL*FPPPHLIHLGL Trigger: CAAGCCTAGGTGTATGAGGTGTGGGGGAGGAAAGCACAGGCATCCCTGAGAAGCCTGTTGGAGAATCAGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||
| CDS CAA 90 bp | CTCCAGGGTTTGGTTAAAGTGCCTCTGGGATGCTTCTTGCTCCGATaGAAACTCGAATCTCCCCTGAGGATGCTGATTCTCCAACAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LQGLVKVPLGCFLLR*KLESPLRMLILQQA Trigger: AGCCTGTTGGAGAATCAGCATCCTCAGGGGAGATTCGAGTTTCAATCGGAGCAAGAAGCATCCCAGAGGCACTTTAACCAAACCCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581844.1 ENST00000657287.1 |
||
| CDS CAA 72 bp | CTCCAGGGTTTGGTTAAAGTGCCTCTGGGATGCTTCTaGCTCCGATTGAAACTCGAATCTCCCCTGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LQGLVKVPLGCF*LRLKLESPLRM Trigger: CATCCTCAGGGGAGATTCGAGTTTCAATCGGAGCAAGAAGCATCCCAGAGGCACTTTAACCAAACCCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581844.1 ENST00000657287.1 |
||
| CDS GCA 72 bp | TTCTCTCTCCAGGGTTTGGTTAAAGTGCCTCTGGGATaGTTCTTGCTCCGATTGAAACTCGAATCTCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FSLQGLVKVPLG*FLLRLKLESPL Trigger: CAGGGGAGATTCGAGTTTCAATCGGAGCAAGAAGCATCCCAGAGGCACTTTAACCAAACCCTGGAGAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581844.1 ENST00000657287.1 |
||
| CDS CCA 72 bp | GCCACAAGGCCCATCCAGAGGCAAGGAGTAAGAAAATaGCTTCTGTTTACTGATGGGAAGAACCGCAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ATRPIQRQGVRK*LLFTDGKNRKV Trigger: GACTTTGCGGTTCTTCCCATCAGTAAACAGAAGCCATTTTCTTACTCCTTGCCTCTGGATGGGCCTTGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581844.1 ENST00000657287.1 |
||
| CDS CCA 72 bp | GGCTTACACATGTGTCAAGGTCAACCTCCTGTCATCTaGACTGGTTGGCTTAGGGTAGTCTCTTTAGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: GLHMCQGQPPVI*TGWLRVVSLGQ Trigger: CTGTCCTAAAGAGACTACCCTAAGCCAACCAGTCCAGATGACAGGAGGTTGACCTTGACACATGTGTAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||
| CDS CAA 72 bp | CTGTGCTTTCCTCCCCCACACCTCATACACCTAGGCTaGAAAGTGACGGATGTGACTTCTTCGTTCTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: LCFPPPHLIHLG*KVTDVTSSFCI Trigger: AATGCAGAACGAAGAAGTCACATCCGTCACTTTCAAGCCTAGGTGTATGAGGTGTGGGGGAGGAAAGCACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||
| CDS CAA 90 bp | TTCTTCTCTCTCCAGGGTTTGGTTAAAGTGCCTCTGGGATGCTTCTaGCTCCGATTGAAACTCGAATCTCCCCTGAGGATGCTGATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FFSLQGLVKVPLGCF*LRLKLESPLRMLIL Trigger: GAGAATCAGCATCCTCAGGGGAGATTCGAGTTTCAATCGGAGCAAGAAGCATCCCAGAGGCACTTTAACCAAACCCTGGAGAGAGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581844.1 ENST00000657287.1 |
||
| CDS CCA 72 bp | ATGTGTCAAGGTCAACCTCCTGTCATCTGGACTGGTTaGCTTAGGGTAGTCTCTTTAGGACAGTTTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MCQGQPPVIWTG*LRVVSLGQFAS Trigger: AGAGGCAAACTGTCCTAAAGAGACTACCCTAAGCCAACCAGTCCAGATGACAGGAGGTTGACCTTGACACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||
| CDS CAA 72 bp | TTGGTTAAAGTGCCTCTGGGATGCTTCTTGCTCCGATaGAAACTCGAATCTCCCCTGAGGATGCTGATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LVKVPLGCFLLR*KLESPLRMLIL Trigger: GAGAATCAGCATCCTCAGGGGAGATTCGAGTTTCAATCGGAGCAAGAAGCATCCCAGAGGCACTTTAACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581844.1 ENST00000657287.1 |
||
| CDS GCA 72 bp | AGTCTCTTTAGGACAGTTTGCCTCTCCTCTGTATTATaGCTCATCTTCCAGCTGGAGAGGTTGGAGCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SLFRTVCLSSVL*LIFQLERLELV Trigger: AACAAGCTCCAACCTCTCCAGCTGGAAGATGAGGCATAATACAGAGGAGAGGCAAACTGTCCTAAAGAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||
| CDS TCA 72 bp | TGGAAATTTGGGCTGAGCATTGATAGATGGTTTTTCTaGTCTGTACTAGGTTTGGCTGACCTTGGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: WKFGLSIDRWFF*SVLGLADLGWA Trigger: AGCCCAGCCAAGGTCAGCCAAACCTAGTACAGATCAGAAAAACCATCTATCAATGCTCAGCCCAAATTTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||
| CDS TCA 72 bp | CCAGAGGCAAGGAGTAAGAAAATGGCTTCTGTTTACTaGTGGGAAGAACCGCAAAGTCACATTGTAACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PEARSKKMASVY*WEEPQSHIVTN Trigger: GTTTGTTACAATGTGACTTTGCGGTTCTTCCCATCAGTAAACAGAAGCCATTTTCTTACTCCTTGCCTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581844.1 ENST00000657287.1 |
||
| CDS TCA 72 bp | AGTAGCACTGACTGTGGTTTACTCCTCCTTATTCCTTaGAATCTTATGTCTGTGCTCACTCTATTTCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSTDCGLLLLIP*NLMSVLTLFLS Trigger: GGAGAGAAATAGAGTGAGCACAGACATAAGATTTCAAGGAATAAGGAGGAGTAAACCACAGTCAGTGCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||
| CDS CCA 72 bp | TATTTCACTGTACACCTGTGTGGCCTTTCCAAATCCTaGAATCTATGTTATTTGGCACCTTCAAACTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: YFTVHLCGLSKS*NLCYLAPSNSP Trigger: AGGTGAGTTTGAAGGTGCCAAATAACATAGATTCCAGGATTTGGAAAGGCCACACAGGTGTACAGTGAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||
| CDS CAA 72 bp | TTGCTTTTTCTAGAGCCTTCCCTCTCCGCCTTCAGCTaGGACTTTCATATCATGAGTCAATCTTTTCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLFLEPSLSAFS*DFHIMSQSFLV Trigger: AACAAGAAAAGATTGACTCATGATATGAAAGTCCAAGCTGAAGGCGGAGAGGGAAGGCTCTAGAAAAAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||
| CDS CCA 72 bp | CTTTTAAATCCTTCATTATTTCACTGTACACCTGTGTaGCCTTTCCAAATCCTGGAATCTATGTTATTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLNPSLFHCTPV*PFQILESMLFG Trigger: GCCAAATAACATAGATTCCAGGATTTGGAAAGGCCACACAGGTGTACAGTGAAATAATGAAGGATTTAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657287.1 |
||