Pregenerated sensors for LINC01911 (Homo sapiens)
Ensembl gene IDs: ENSG00000231040Ensembl transcript IDs: ENST00000450667.2, ENST00000653628.1, ENST00000654420.1, ENST00000654856.1, ENST00000655662.1, ENST00000656564.1, ENST00000661603.1, ENST00000662656.1, ENST00000667114.1, ENST00000667356.1, ENST00000669097.1, ENST00000670621.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCCTGTCCCTCCTCTGCACCACTGAGTGCAGCTGCTCAGTAGCATaGAATGCTCAGCTCTCAACTTCTCTGCATGCCCCTTGTGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LLSLLCTTECSCSVA*NAQLSTSLHAPCAP Trigger: AGGAGCACAAGGGGCATGCAGAGAAGTTGAGAGCTGAGCATTGCATGCTACTGAGCAGCTGCACTCAGTGGTGCAGAGGAGGGACAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653628.1 ENST00000662656.1 |
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| CDS GCA 90 bp | AGCCCTATTCATTTCCTCCCTTATGGGTGCCTCCTGTCCCTCCTCTaGACCACTGAGTGCAGCTGCTCAGTAGCATGCAATGCTCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: SPIHFLPYGCLLSLL*TTECSCSVACNAQL Trigger: GAGCTGAGCATTGCATGCTACTGAGCAGCTGCACTCAGTGGTGCAGAGGAGGGACAGGAGGCACCCATAAGGGAGGAAATGAATAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653628.1 ENST00000662656.1 |
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| CDS GCA 90 bp | CTGACAGCAAAAGGGGAGGCTCTTGGAGAGACATTGCCAGCAAGATaGATTTCTAGGTTGGGCGTAGCTCACTACAGCAGAGGCAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: LTAKGEALGETLPAR*ISRLGVAHYSRGSA Trigger: AGCACTGCCTCTGCTGTAGTGAGCTACGCCCAACCTAGAAATGCATCTTGCTGGCAATGTCTCTCCAAGAGCCTCCCCTTTTGCTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653628.1 ENST00000662656.1 |
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| CDS CCA 90 bp | GGACTCATCTGGATGCAGGCCTGTATCTGCAGTCAGCTGCCTGGTTaGCTAAAGCTGCCTATTCTAGAATGGCCTCAGCTGTTATGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GLIWMQACICSQLPG*LKLPILEWPQLLWL Trigger: GAGCCATAACAGCTGAGGCCATTCTAGAATAGGCAGCTTTAGCCAACCAGGCAGCTGACTGCAGATACAGGCCTGCATCCAGATGAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000450667.2 ENST00000667356.1 |
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| CDS GCA 90 bp | TTGGGCGTAGCTCACTACAGCAGAGGCAGTGCTGAACTCACCATCTaGAACGCCTACTTGTTTTCCAGTCAGATTTGTCCACCGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: LGVAHYSRGSAELTI*NAYLFSSQICPPSL Trigger: AAGACTCGGTGGACAAATCTGACTGGAAAACAAGTAGGCGTTGCAGATGGTGAGTTCAGCACTGCCTCTGCTGTAGTGAGCTACGCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653628.1 ENST00000662656.1 |
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| CDS CCA 90 bp | TTCTGGACTCATCTGGATGCAGGCCTGTATCTGCAGTCAGCTGCCTaGTTGGCTAAAGCTGCCTATTCTAGAATGGCCTCAGCTGTTATG | + |
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Preference number: 5 (lower is better) Translates to: FWTHLDAGLYLQSAA*LAKAAYSRMASAVM Trigger: CATAACAGCTGAGGCCATTCTAGAATAGGCAGCTTTAGCCAACCAGGCAGCTGACTGCAGATACAGGCCTGCATCCAGATGAGTCCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000450667.2 ENST00000667356.1 |
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| CDS CCA 90 bp | GTCACCAACTTCCCTGATAGCTGGGAAGGGTTCCAAGAGAACAAGTaGGAAAGCTTGCTTGAGGCCTGGGCTTCTGATGTGTCATCACAT | + |
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Preference number: 5 (lower is better) Translates to: VTNFPDSWEGFQENK*ESLLEAWASDVSSH Trigger: ATGTGATGACACATCAGAAGCCCAGGCCTCAAGCAAGCTTTCCCACTTGTTCTCTTGGAACCCTTCCCAGCTATCAGGGAAGTTGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661603.1 |
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| CDS CCA 90 bp | ATCTGCAGTCAGCTGCCTGGTTGGCTAAAGCTGCCTATTCTAGAATaGCCTCAGCTGTTATGGCTCATCAGTGTTCCAGTGACCTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: ICSQLPGWLKLPILE*PQLLWLISVPVTSH Trigger: ATGAGAGGTCACTGGAACACTGATGAGCCATAACAGCTGAGGCCATTCTAGAATAGGCAGCTTTAGCCAACCAGGCAGCTGACTGCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000450667.2 ENST00000667356.1 |
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| CDS CCA 90 bp | CTGACTAACATGGTGAAACCTCACCTGAAGGATGAAGTCAGAGGGTaGAATAACAGACAAACCAGCTGTGGGGGAAGGATGTCATGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LTNMVKPHLKDEVRG*NNRQTSCGGRMSWW Trigger: CCACCATGACATCCTTCCCCCACAGCTGGTTTGTCTGTTATTCCACCCTCTGACTTCATCCTTCAGGTGAGGTTTCACCATGTTAGTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667114.1 |
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| CDS GCA 90 bp | TCCCATACACATGAGCATGATCAGTTCTTGAACAGCTTGTCCAAATaGTCCCTGTCCCACTTCCTACCATGGTTCCAGGTCTTCATCTGC | + |
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Preference number: 5 (lower is better) Translates to: SHTHEHDQFLNSLSK*SLSHFLPWFQVFIC Trigger: GCAGATGAAGACCTGGAACCATGGTAGGAAGTGGGACAGGGAGCATTTGGACAAGCTGTTCAAGAACTGATCATGCTCATGTGTATGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000450667.2 ENST00000654856.1 ENST00000655662.1 ENST00000667114.1 ENST00000669097.1 |
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| CDS GCA 90 bp | TCCCATACACATGAGCATGATCAGTTCTTGAACAGCTTGTCCAAATaGTCCCTGTCCCACTTCCTACCATGGTTCCAGGTCATCTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: SHTHEHDQFLNSLSK*SLSHFLPWFQVICN Trigger: GTTGCAGATGACCTGGAACCATGGTAGGAAGTGGGACAGGGAGCATTTGGACAAGCTGTTCAAGAACTGATCATGCTCATGTGTATGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670621.1 |
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| CDS CCA 90 bp | TTGGTTTCCTCATCTGATAGCTGGGAAGGGTTCCAAGAGAACAAGTaGGAAAGCTTGCTTGAGGCCTGGGCTTCTGATGTGTCATCACAT | + |
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Preference number: 5 (lower is better) Translates to: LVSSSDSWEGFQENK*ESLLEAWASDVSSH Trigger: ATGTGATGACACATCAGAAGCCCAGGCCTCAAGCAAGCTTTCCCACTTGTTCTCTTGGAACCCTTCCCAGCTATCAGATGAGGAAACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655662.1 |
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| CDS CCA 90 bp | TGGGCTTATTTACCTGATAGCTGGGAAGGGTTCCAAGAGAACAAGTaGGAAAGCTTGCTTGAGGCCTGGGCTTCTGATGTGTCATCACAT | + |
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Preference number: 5 (lower is better) Translates to: WAYLPDSWEGFQENK*ESLLEAWASDVSSH Trigger: ATGTGATGACACATCAGAAGCCCAGGCCTCAAGCAAGCTTTCCCACTTGTTCTCTTGGAACCCTTCCCAGCTATCAGGTAAATAAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667356.1 |
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| CDS TCA 90 bp | TCTCATATCCGGCAATTTTCTGTCCTGAGGCTCATGGCGGTGACCTaGACCAATCAATTTGTAAGCATAGACCTAGCACTGTTCCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SHIRQFSVLRLMAVT*TNQFVSIDLALFQV Trigger: CACCTGGAACAGTGCTAGGTCTATGCTTACAAATTGATTGGTTCAGGTCACCGCCATGAGCCTCAGGACAGAAAATTGCCGGATATGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000450667.2 ENST00000653628.1 ENST00000654420.1 ENST00000654856.1 ENST00000655662.1 ENST00000661603.1 ENST00000662656.1 ENST00000667114.1 ENST00000669097.1 ENST00000670621.1 |
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| CDS GCA 90 bp | TCTCCCATCTTCAAATCTGCAACTCATCTCAGTAGGCTTGTTCCTTaGCCCACCAGTCTTGTGCTCTTCAGGAATTTCTCTTCCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: SPIFKSATHLSRLVP*PTSLVLFRNFSSSI Trigger: GATGGAGGAAGAGAAATTCCTGAAGAGCACAAGACTGGTGGGGCAAGGAACAAGCCTACTGAGATGAGTTGCAGATTTGAAGATGGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000450667.2 ENST00000654856.1 ENST00000655662.1 ENST00000661603.1 ENST00000667114.1 ENST00000669097.1 ENST00000670621.1 |
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| CDS GCA 90 bp | CACCGAGTCTTCCTCACTCCCCGCTGTGCCATCAAGCTGGCCATGTaGCAGTTTCTATTAGGTATTGAGGTTATAAAAATGGTTTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: HRVFLTPRCAIKLAM*QFLLGIEVIKMVSE Trigger: CTCAGAAACCATTTTTATAACCTCAATACCTAATAGAAACTGGCACATGGCCAGCTTGATGGCACAGCGGGGAGTGAGGAAGACTCGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654856.1 |
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| CDS CCA 90 bp | TTCATTACTTGGTTTCCTCATCTAGGTTGCTTTTCTGGACTCATCTaGATGCAGGCCTGTATCTGCAGTCAGCTGCCTGGTTGGCTAAAG | + |
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Preference number: 5 (lower is better) Translates to: FITWFPHLGCFSGLI*MQACICSQLPGWLK Trigger: CTTTAGCCAACCAGGCAGCTGACTGCAGATACAGGCCTGCATCCAGATGAGTCCAGAAAAGCAACCTAGATGAGGAAACCAAGTAATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667356.1 |
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| CDS CCA 90 bp | ATACATCTTTATGCTGATAGCTGGGAAGGGTTCCAAGAGAACAAGTaGGAAAGCTTGCTTGAGGCCTGGGCTTCTGATGTGTCATCACAT | + |
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Preference number: 5 (lower is better) Translates to: IHLYADSWEGFQENK*ESLLEAWASDVSSH Trigger: ATGTGATGACACATCAGAAGCCCAGGCCTCAAGCAAGCTTTCCCACTTGTTCTCTTGGAACCCTTCCCAGCTATCAGCATAAAGATGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670621.1 |
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| CDS CCA 90 bp | GGATGTCATGGTGGGAGATCAGCTAGAAAAGGCTTCTCTGGAACATaGGAGGCTTCAAAGGCCCATATGTCACCATTTCCATCTCTAAAT | + |
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Preference number: 5 (lower is better) Translates to: GCHGGRSARKGFSGT*EASKAHMSPFPSLN Trigger: ATTTAGAGATGGAAATGGTGACATATGGGCCTTTGAAGCCTCCCATGTTCCAGAGAAGCCTTTTCTAGCTGATCTCCCACCATGACATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667114.1 |
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| CDS CCA 90 bp | GCAGTTACTCAACATTTTCATTACTTGGTTTCCTCATCTGATAGCTaGGAAGGGTTCCAAGAGAACAAGTGGGAAAGCTTGCTTGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: AVTQHFHYLVSSSDS*EGFQENKWESLLEA Trigger: GGCCTCAAGCAAGCTTTCCCACTTGTTCTCTTGGAACCCTTCCCAGCTATCAGATGAGGAAACCAAGTAATGAAAATGTTGAGTAACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655662.1 |
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| CDS TCA 90 bp | AGTCACATTGCAAAGAGCATGGAGGCAAGAAGGAATAAAGGATTATaGGCCAATTTTGTAATTTACCACAATCTGCCTCTGGCCACAATT | + |
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Preference number: 5 (lower is better) Translates to: SHIAKSMEARRNKGL*ANFVIYHNLPLATI Trigger: AATTGTGGCCAGAGGCAGATTGTGGTAAATTACAAAATTGGCTCATAATCCTTTATTCCTTCTTGCCTCCATGCTCTTTGCAATGTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000653628.1 ENST00000654856.1 ENST00000655662.1 ENST00000656564.1 ENST00000661603.1 ENST00000667356.1 ENST00000669097.1 ENST00000670621.1 |
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| CDS TCA 90 bp | ATACAATCTGAGAAGAAGATAAAAGCTGCTACTGGTTTAGCAGTGTaGTTCTTTTCAATGTCTTTGCCAGTAGTGTCTGATAGCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: IQSEKKIKAATGLAV*FFSMSLPVVSDSWE Trigger: TTCCCAGCTATCAGACACTACTGGCAAAGACATTGAAAAGAATCACACTGCTAAACCAGTAGCAGCTTTTATCTTCTTCTCAGATTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000653628.1 ENST00000654856.1 ENST00000656564.1 ENST00000669097.1 |
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| CDS TCA 90 bp | GAAGTCTATGTGTTAGAAACACTTTTATCCTGCATGTATACAATCTaGGAAGAAGATAAAAGCTGCTACTGGTTTAGCAGTGTGATTCTT | + |
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Preference number: 5 (lower is better) Translates to: EVYVLETLLSCMYTI*EEDKSCYWFSSVIL Trigger: AAGAATCACACTGCTAAACCAGTAGCAGCTTTTATCTTCTTCTCAGATTGTATACATGCAGGATAAAAGTGTTTCTAACACATAGACTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000450667.2 ENST00000653628.1 ENST00000654420.1 ENST00000654856.1 ENST00000655662.1 ENST00000656564.1 ENST00000662656.1 ENST00000667114.1 ENST00000669097.1 |
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| CDS CCA 72 bp | GCTGACTCTTGCAGTCACAGCTCACAGGGGCTTCTCTaGAACATGGGAGGCTTCAAAGGCCCATATGTCACC | + |
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Preference number: 6 (lower is better) Translates to: ADSCSHSSQGLL*NMGGFKGPYVT Trigger: GGTGACATATGGGCCTTTGAAGCCTCCCATGTTCCAGAGAAGCCCCTGTGAGCTGTGACTGCAAGAGTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655662.1 ENST00000661603.1 ENST00000662656.1 ENST00000670621.1 |
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| CDS CAA 90 bp | GGGGAGGCTCTTGGAGAGACATTGCCAGCAAGATGCATTTCTAGGTaGGGCGTAGCTCACTACAGCAGAGGCAGTGCTGAACTCACCATC | + |
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Preference number: 6 (lower is better) Translates to: GEALGETLPARCISR*GVAHYSRGSAELTI Trigger: GATGGTGAGTTCAGCACTGCCTCTGCTGTAGTGAGCTACGCCCAACCTAGAAATGCATCTTGCTGGCAATGTCTCTCCAAGAGCCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653628.1 ENST00000662656.1 |
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| CDS GCA 72 bp | CAGATTTGTCCACCGAGTCTTCCTCACTCCCCGCTGTaGCATCAAGCTGGCCATGTGCCAGTTTCTATTAGG | + |
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Preference number: 6 (lower is better) Translates to: QICPPSLPHSPL*HQAGHVPVSIR Trigger: CCTAATAGAAACTGGCACATGGCCAGCTTGATGGCACAGCGGGGAGTGAGGAAGACTCGGTGGACAAATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654856.1 |
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| CDS CCA 72 bp | TGGATGCAGGCCTGTATCTGCAGTCAGCTGCCTGGTTaGCTAAAGCTGCCTATTCTAGAATGGCCTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: WMQACICSQLPG*LKLPILEWPQL Trigger: CAGCTGAGGCCATTCTAGAATAGGCAGCTTTAGCCAACCAGGCAGCTGACTGCAGATACAGGCCTGCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450667.2 ENST00000654420.1 ENST00000667356.1 |
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| CDS CAA 72 bp | CTGGATGCAGGCCTGTATCTGCAGTCAGCTGCCTGGTaGGCTAAAGCTGCCTATTCTAGAATGGCCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LDAGLYLQSAAW*AKAAYSRMASA Trigger: AGCTGAGGCCATTCTAGAATAGGCAGCTTTAGCCAACCAGGCAGCTGACTGCAGATACAGGCCTGCATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450667.2 ENST00000654420.1 ENST00000667356.1 |
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| CDS CAA 90 bp | CACTACAGCAGAGGCAGTGCTGAACTCACCATCTGCAACGCCTACTaGTTTTCCAGTCAGATTTGTCCACCGAGTCTTCCTCACTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: HYSRGSAELTICNAY*FSSQICPPSLPHSP Trigger: CGGGGAGTGAGGAAGACTCGGTGGACAAATCTGACTGGAAAACAAGTAGGCGTTGCAGATGGTGAGTTCAGCACTGCCTCTGCTGTAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653628.1 ENST00000662656.1 |
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| CDS CCA 72 bp | CATCTGGATGCAGGCCTGTATCTGCAGTCAGCTGCCTaGTTGGCTAAAGCTGCCTATTCTAGAATGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: HLDAGLYLQSAA*LAKAAYSRMAS Trigger: TGAGGCCATTCTAGAATAGGCAGCTTTAGCCAACCAGGCAGCTGACTGCAGATACAGGCCTGCATCCAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450667.2 ENST00000654420.1 ENST00000667356.1 |
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| CDS CCA 72 bp | CTTGCAGTCACAGCTCACAGGGGCTTCTCTGGAACATaGGAGGCTTCAAAGGCCCATATGTCACCATTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LAVTAHRGFSGT*EASKAHMSPFP Trigger: TGGAAATGGTGACATATGGGCCTTTGAAGCCTCCCATGTTCCAGAGAAGCCCCTGTGAGCTGTGACTGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655662.1 ENST00000661603.1 ENST00000662656.1 ENST00000670621.1 |
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| CDS CAA 90 bp | TGGACTCATCTGGATGCAGGCCTGTATCTGCAGTCAGCTGCCTGGTaGGCTAAAGCTGCCTATTCTAGAATGGCCTCAGCTGTTATGGCT | + |
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Preference number: 6 (lower is better) Translates to: WTHLDAGLYLQSAAW*AKAAYSRMASAVMA Trigger: AGCCATAACAGCTGAGGCCATTCTAGAATAGGCAGCTTTAGCCAACCAGGCAGCTGACTGCAGATACAGGCCTGCATCCAGATGAGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000450667.2 ENST00000667356.1 |
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| CDS GCA 72 bp | GCTGGGAAGGGTTCCAAGAGAACAAGTGGGAAAGCTTaGTTGAGGCCTGGGCTTCTGATGTGTCATCACATT | + |
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Preference number: 6 (lower is better) Translates to: AGKGSKRTSGKA*LRPGLLMCHHI Trigger: AATGTGATGACACATCAGAAGCCCAGGCCTCAAGCAAGCTTTCCCACTTGTTCTCTTGGAACCCTTCCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000653628.1 ENST00000654856.1 ENST00000655662.1 ENST00000656564.1 ENST00000661603.1 ENST00000667356.1 ENST00000669097.1 ENST00000670621.1 |
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| CDS CCA 72 bp | CAGCTGCCTGGTTGGCTAAAGCTGCCTATTCTAGAATaGCCTCAGCTGTTATGGCTCATCAGTGTTCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: QLPGWLKLPILE*PQLLWLISVPV Trigger: CACTGGAACACTGATGAGCCATAACAGCTGAGGCCATTCTAGAATAGGCAGCTTTAGCCAACCAGGCAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000450667.2 ENST00000667356.1 |
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| CDS CCA 72 bp | TGGTTTCCTCATCTAGGTTGCTTTTCTGGACTCATCTaGATGCAGGCCTGTATCTGCAGTCAGCTGCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: WFPHLGCFSGLI*MQACICSQLPG Trigger: ACCAGGCAGCTGACTGCAGATACAGGCCTGCATCCAGATGAGTCCAGAAAAGCAACCTAGATGAGGAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667356.1 |
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| CDS TCA 72 bp | AATGGCCTCAGCTGTTATGGCTCATCAGTGTTCCAGTaGCCTCTCATCATCCAGCACAATAGCCTGGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: NGLSCYGSSVFQ*PLIIQHNSLGL Trigger: TAAGCCCAGGCTATTGTGCTGGATGATGAGAGGTCACTGGAACACTGATGAGCCATAACAGCTGAGGCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000450667.2 ENST00000667356.1 |
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| CDS TCA 72 bp | CAGCTCACAGGGGTAGCCAAGCTGGTACTGGAACCATaGCCTTTAGAGTATGAGTCCTGGGAATTTTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: QLTGVAKLVLEP*PLEYESWEFSE Trigger: TTCGGAAAATTCCCAGGACTCATACTCTAAAGGTCATGGTTCCAGTACCAGCTTGGCTACCCCTGTGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450667.2 |
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| CDS GCA 72 bp | CATGAGCATGATCAGTTCTTGAACAGCTTGTCCAAATaGTCCCTGTCCCACTTCCTACCATGGTTCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: HEHDQFLNSLSK*SLSHFLPWFQV Trigger: GACCTGGAACCATGGTAGGAAGTGGGACAGGGAGCATTTGGACAAGCTGTTCAAGAACTGATCATGCTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000450667.2 ENST00000654856.1 ENST00000655662.1 ENST00000661603.1 ENST00000667114.1 ENST00000669097.1 ENST00000670621.1 |
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| CDS GCA 72 bp | GCTCACTACAGCAGAGGCAGTGCTGAACTCACCATCTaGAACGCCTACTTGTTTTCCAGTCAGATTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: AHYSRGSAELTI*NAYLFSSQICP Trigger: TGGACAAATCTGACTGGAAAACAAGTAGGCGTTGCAGATGGTGAGTTCAGCACTGCCTCTGCTGTAGTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653628.1 ENST00000662656.1 |
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| CDS CCA 72 bp | ACCATCCTGACTAACATGGTGAAACCTCACCTTCTCTaGAACATGGGAGGCTTCAAAGGCCCATATGTCACC | + |
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Preference number: 6 (lower is better) Translates to: TILTNMVKPHLL*NMGGFKGPYVT Trigger: GGTGACATATGGGCCTTTGAAGCCTCCCATGTTCCAGAGAAGGTGAGGTTTCACCATGTTAGTCAGGATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000450667.2 ENST00000653628.1 ENST00000654420.1 ENST00000654856.1 ENST00000669097.1 |
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| CDS CCA 72 bp | GGTGGGAGATCAGCTAGAAAAGGCTTCTCTGGAACATaGGAGGCTTCAAAGGCCCATATGTCACCATTTCCA | + |
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Preference number: 6 (lower is better) Translates to: GGRSARKGFSGT*EASKAHMSPFP Trigger: TGGAAATGGTGACATATGGGCCTTTGAAGCCTCCCATGTTCCAGAGAAGCCTTTTCTAGCTGATCTCCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667114.1 |
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| CDS CCA 72 bp | ATGGTGAAACCTCACCTGAAGGATGAAGTCAGAGGGTaGAATAACAGACAAACCAGCTGTGGGGGAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: MVKPHLKDEVRG*NNRQTSCGGRM Trigger: CATCCTTCCCCCACAGCTGGTTTGTCTGTTATTCCACCCTCTGACTTCATCCTTCAGGTGAGGTTTCACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667114.1 |
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| CDS CAA 72 bp | GGGAAGGGTTCCAAGAGAACAAGTGGGAAAGCTTGCTaGAGGCCTGGGCTTCTGATGTGTCATCACATTTAC | + |
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Preference number: 6 (lower is better) Translates to: GKGSKRTSGKAC*RPGLLMCHHIY Trigger: GTAAATGTGATGACACATCAGAAGCCCAGGCCTCAAGCAAGCTTTCCCACTTGTTCTCTTGGAACCCTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000653628.1 ENST00000654856.1 ENST00000655662.1 ENST00000656564.1 ENST00000661603.1 ENST00000667356.1 ENST00000669097.1 ENST00000670621.1 |
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| CDS CAA 72 bp | AGAGGCAGTGCTGAACTCACCATCTGCAACGCCTACTaGTTTTCCAGTCAGATTTGTCCACCGAGTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RGSAELTICNAY*FSSQICPPSLP Trigger: AGGAAGACTCGGTGGACAAATCTGACTGGAAAACAAGTAGGCGTTGCAGATGGTGAGTTCAGCACTGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653628.1 ENST00000662656.1 |
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| CDS TCA 72 bp | CGGCAATTTTCTGTCCTGAGGCTCATGGCGGTGACCTaGACCAATCAATTTGTAAGCATAGACCTAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: RQFSVLRLMAVT*TNQFVSIDLAL Trigger: CAGTGCTAGGTCTATGCTTACAAATTGATTGGTTCAGGTCACCGCCATGAGCCTCAGGACAGAAAATTGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000450667.2 ENST00000653628.1 ENST00000654420.1 ENST00000654856.1 ENST00000655662.1 ENST00000661603.1 ENST00000662656.1 ENST00000667114.1 ENST00000669097.1 ENST00000670621.1 |
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| CDS CCA 72 bp | TGTTCCAGTGACCTCTCATCATCCAGCACAATAGCCTaGGCTTATTTACCTGATAGCACAATCTGCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: CSSDLSSSSTIA*AYLPDSTICLW Trigger: CCAGAGGCAGATTGTGCTATCAGGTAAATAAGCCCAGGCTATTGTGCTGGATGATGAGAGGTCACTGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450667.2 |
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| CDS CCA 72 bp | TCCAGCACAATAGCCTGGGCTTATTTACCTGATAGCTaGGAAGGGTTCCAAGAGAACAAGTGGGAAAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSTIAWAYLPDS*EGFQENKWESL Trigger: CAAGCTTTCCCACTTGTTCTCTTGGAACCCTTCCCAGCTATCAGGTAAATAAGCCCAGGCTATTGTGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667356.1 |
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| CDS CCA 72 bp | TGTTCCAGTGACCTCTCATCATCCAGCACAATAGCCTaGGCTTATTTACCTGATAGCTGGGAAGGGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: CSSDLSSSSTIA*AYLPDSWEGFQ Trigger: TTGGAACCCTTCCCAGCTATCAGGTAAATAAGCCCAGGCTATTGTGCTGGATGATGAGAGGTCACTGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667356.1 |
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| CDS CAA 72 bp | CTACCATGGTTCCAGGTCTTCATCTGCAACGCCTACTaGTTTTCCAGTCAGATTTGTCCACCGAGTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LPWFQVFICNAY*FSSQICPPSLP Trigger: AGGAAGACTCGGTGGACAAATCTGACTGGAAAACAAGTAGGCGTTGCAGATGAAGACCTGGAACCATGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000450667.2 ENST00000654856.1 ENST00000655662.1 ENST00000667114.1 ENST00000669097.1 |
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| CDS CAA 72 bp | TCCCATACACATGAGCATGATCAGTTCTTGAACAGCTaGTCCAAATGCTCCCTGTCCCACTTCCTACCATGG | + |
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Preference number: 6 (lower is better) Translates to: SHTHEHDQFLNS*SKCSLSHFLPW Trigger: CCATGGTAGGAAGTGGGACAGGGAGCATTTGGACAAGCTGTTCAAGAACTGATCATGCTCATGTGTATGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000450667.2 ENST00000654856.1 ENST00000655662.1 ENST00000661603.1 ENST00000667114.1 ENST00000669097.1 ENST00000670621.1 |
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| CDS CAA 90 bp | CTGATAGCTGGGAAGGGTTCCAAGAGAACAAGTGGGAAAGCTTGCTaGAGGCCTGGGCTTCTGATGTGTCATCACATTTACCTCTGTATT | + |
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Preference number: 6 (lower is better) Translates to: LIAGKGSKRTSGKAC*RPGLLMCHHIYLCI Trigger: AATACAGAGGTAAATGTGATGACACATCAGAAGCCCAGGCCTCAAGCAAGCTTTCCCACTTGTTCTCTTGGAACCCTTCCCAGCTATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000653628.1 ENST00000654856.1 ENST00000655662.1 ENST00000656564.1 ENST00000661603.1 ENST00000667356.1 ENST00000669097.1 ENST00000670621.1 |
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| CDS CCA 72 bp | GCCTGGGCTTATTTACCTGATAGCACAATCTGCCTCTaGCCACAATTTTCACCTTTCTGCCCATGTACAACA | + |
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Preference number: 6 (lower is better) Translates to: AWAYLPDSTICL*PQFSPFCPCTT Trigger: TGTTGTACATGGGCAGAAAGGTGAAAATTGTGGCCAGAGGCAGATTGTGCTATCAGGTAAATAAGCCCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450667.2 |
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| CDS CCA 72 bp | TCAATGTCTTTGCCAGTAGTGTCTAGGTTGCTTTTCTaGACTCATCTGGATGCAGGCCTGTATCTGCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SMSLPVVSRLLF*THLDAGLYLQS Trigger: TGACTGCAGATACAGGCCTGCATCCAGATGAGTCCAGAAAAGCAACCTAGACACTACTGGCAAAGACATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000450667.2 ENST00000654420.1 ENST00000667114.1 |
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| CDS TCA 72 bp | ATCTGTTTTCCCATACACATGAGCATGATCAGTTCTTaGACAGCTTGTCCAAATGCTCCCTGTCCCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: ICFPIHMSMISS*TACPNAPCPTS Trigger: GGAAGTGGGACAGGGAGCATTTGGACAAGCTGTTCAAGAACTGATCATGCTCATGTGTATGGGAAAACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000450667.2 ENST00000654856.1 ENST00000655662.1 ENST00000661603.1 ENST00000667114.1 ENST00000669097.1 ENST00000670621.1 |
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| CDS GCA 72 bp | ACAATAGCCTGGGCTTATTTACCTGATAGCACAATCTaGCTCTGGCCACAATTTTCACCTTTCTGCCCATGT | + |
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Preference number: 6 (lower is better) Translates to: TIAWAYLPDSTI*LWPQFSPFCPC Trigger: ACATGGGCAGAAAGGTGAAAATTGTGGCCAGAGGCAGATTGTGCTATCAGGTAAATAAGCCCAGGCTATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450667.2 |
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| CDS GCA 72 bp | TTCAAATCTGCAACTCATCTCAGTAGGCTTGTTCCTTaGCCCACCAGTCTTGTGCTCTTCAGGAATTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: FKSATHLSRLVP*PTSLVLFRNFS Trigger: AGAGAAATTCCTGAAGAGCACAAGACTGGTGGGGCAAGGAACAAGCCTACTGAGATGAGTTGCAGATTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000450667.2 ENST00000654856.1 ENST00000655662.1 ENST00000661603.1 ENST00000667114.1 ENST00000669097.1 ENST00000670621.1 |
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| CDS GCA 72 bp | TTCCTCACTCCCCGCTGTGCCATCAAGCTGGCCATGTaGCAGTTTCTATTAGGTATTGAGGTTATAAAAATG | + |
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Preference number: 6 (lower is better) Translates to: FLTPRCAIKLAM*QFLLGIEVIKM Trigger: CATTTTTATAACCTCAATACCTAATAGAAACTGGCACATGGCCAGCTTGATGGCACAGCGGGGAGTGAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654856.1 |
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| CDS CCA 72 bp | TTCCAAGAGAACAAGTGGGAAAGCTTGCTTGAGGCCTaGGCTTCTGATGTGTCATCACATTTACCTCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: FQENKWESLLEA*ASDVSSHLPLY Trigger: ATACAGAGGTAAATGTGATGACACATCAGAAGCCCAGGCCTCAAGCAAGCTTTCCCACTTGTTCTCTTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000653628.1 ENST00000654856.1 ENST00000655662.1 ENST00000656564.1 ENST00000661603.1 ENST00000667356.1 ENST00000669097.1 ENST00000670621.1 |
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| CDS CAA 72 bp | CATCTGTTTTCCCATACACATGAGCATGATCAGTTCTaGAACAGCTTGTCCAAATGCTCCCTGTCCCACTTC | + |
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Preference number: 6 (lower is better) Translates to: HLFSHTHEHDQF*NSLSKCSLSHF Trigger: GAAGTGGGACAGGGAGCATTTGGACAAGCTGTTCAAGAACTGATCATGCTCATGTGTATGGGAAAACAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000450667.2 ENST00000654856.1 ENST00000655662.1 ENST00000661603.1 ENST00000667114.1 ENST00000669097.1 ENST00000670621.1 |
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| CDS CAA 90 bp | GATGCAGTTACTCAACATTTTCATTACTTGGTTTCCTCATCTAGGTaGCTTTTCTGGACTCATCTGGATGCAGGCCTGTATCTGCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: DAVTQHFHYLVSSSR*LFWTHLDAGLYLQS Trigger: TGACTGCAGATACAGGCCTGCATCCAGATGAGTCCAGAAAAGCAACCTAGATGAGGAAACCAAGTAATGAAAATGTTGAGTAACTGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667356.1 |
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| CDS TCA 72 bp | AGCCAAGCTGGTACTGGAACCATGACCTTTAGAGTATaGGTCCTGGGAATTTTCCGAAGTTATTTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SQAGTGTMTFRV*VLGIFRSYFLF Trigger: GAAGAGAAAATAACTTCGGAAAATTCCCAGGACTCATACTCTAAAGGTCATGGTTCCAGTACCAGCTTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450667.2 |
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| CDS TCA 72 bp | GAGAAGAAGATAAAAGCTGCTACTGGTTTAGCAGTGTaGTTCTTTTCAATGTCTTTGCCAGTAGTGTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: EKKIKAATGLAV*FFSMSLPVVSP Trigger: CGGAGACACTACTGGCAAAGACATTGAAAAGAATCACACTGCTAAACCAGTAGCAGCTTTTATCTTCTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655662.1 |
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| CDS TCA 72 bp | GAGAAGAAGATAAAAGCTGCTACTGGTTTAGCAGTGTaGTTCTTTTCAATGTCTTTGCCAGTAGTGTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: EKKIKAATGLAV*FFSMSLPVVSR Trigger: CCTAGACACTACTGGCAAAGACATTGAAAAGAATCACACTGCTAAACCAGTAGCAGCTTTTATCTTCTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000450667.2 ENST00000654420.1 ENST00000667114.1 |
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| CDS TCA 72 bp | GAGAAGAAGATAAAAGCTGCTACTGGTTTAGCAGTGTaGTTCTTTTCAATGTCTTTGCCAGTAGTGTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: EKKIKAATGLAV*FFSMSLPVVSD Trigger: ATCAGACACTACTGGCAAAGACATTGAAAAGAATCACACTGCTAAACCAGTAGCAGCTTTTATCTTCTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000653628.1 ENST00000654856.1 ENST00000656564.1 ENST00000669097.1 |
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| CDS CAA 72 bp | TCGATCATGAGAAACCCTTTTATAGACAATGTGAAATaGAACAGGGAAATACACTCCAATTACTGGCCTACA | + |
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Preference number: 6 (lower is better) Translates to: SIMRNPFIDNVK*NREIHSNYWPT Trigger: TGTAGGCCAGTAATTGGAGTGTATTTCCCTGTTCAATTTCACATTGTCTATAAAAGGGTTTCTCATGATCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000450667.2 ENST00000667114.1 |
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| CDS CAA 72 bp | ATATACATAGATGCAGTTACTCAACATTTTCATTACTaGGTTTCCTCATCTGATAGCTGGGAAGGGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: IYIDAVTQHFHY*VSSSDSWEGFQ Trigger: TTGGAACCCTTCCCAGCTATCAGATGAGGAAACCAAGTAATGAAAATGTTGAGTAACTGCATCTATGTATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655662.1 |
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| CDS CAA 90 bp | TACTTGTTTATATACATAGATGCAGTTACTCAACATTTTCATTACTaGGTTTCCTCATCTGATAGCTGGGAAGGGTTCCAAGAGAACAAG | + |
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Preference number: 6 (lower is better) Translates to: YLFIYIDAVTQHFHY*VSSSDSWEGFQENK Trigger: CTTGTTCTCTTGGAACCCTTCCCAGCTATCAGATGAGGAAACCAAGTAATGAAAATGTTGAGTAACTGCATCTATGTATATAAACAAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655662.1 |
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| CDS CAA 90 bp | TACTTGTTTATATACATAGATGCAGTTACTCAACATTTTCATTACTaGGTTTCCTCATCTAGGTTGCTTTTCTGGACTCATCTGGATGCA | + |
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Preference number: 6 (lower is better) Translates to: YLFIYIDAVTQHFHY*VSSSRLLFWTHLDA Trigger: TGCATCCAGATGAGTCCAGAAAAGCAACCTAGATGAGGAAACCAAGTAATGAAAATGTTGAGTAACTGCATCTATGTATATAAACAAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667356.1 |
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| CDS CAA 72 bp | ATATACATAGATGCAGTTACTCAACATTTTCATTACTaGGTTTCCTCATCTAGGTTGCTTTTCTGGACTCAT | + |
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Preference number: 6 (lower is better) Translates to: IYIDAVTQHFHY*VSSSRLLFWTH Trigger: ATGAGTCCAGAAAAGCAACCTAGATGAGGAAACCAAGTAATGAAAATGTTGAGTAACTGCATCTATGTATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667356.1 |
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