Pregenerated sensors for LINC01907 (Homo sapiens)
Ensembl gene IDs: ENSG00000226125Ensembl transcript IDs: ENST00000415174.1, ENST00000660361.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCTAGGGTGCCCCATTGGTGCCAAGAGCATAACCACAGAGGTCCTTaGCTACTCCTTGCAACCCTTGCTGGACACCCCACTGCTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: SRVPHWCQEHNHRGP*LLLATLAGHPTAPG Trigger: GCCAGGAGCAGTGGGGTGTCCAGCAAGGGTTGCAAGGAGTAGTCAAGGACCTCTGTGGTTATGCTCTTGGCACCAATGGGGCACCCTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS TCA 90 bp | GTCACTCCAGCAGGACAGTCAGGGGCGAAGTGCTGGCTGCCCTTATaGGAGTTCGTCGCTGGCACTGTGACAGACGAAATTCACTTGACG | + |
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Preference number: 5 (lower is better) Translates to: VTPAGQSGAKCWLPL*EFVAGTVTDEIHLT Trigger: CGTCAAGTGAATTTCGTCTGTCACAGTGCCAGCGACGAACTCTCATAAGGGCAGCCAGCACTTCGCCCCTGACTGTCCTGCTGGAGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS GCA 90 bp | ACACCAGTATGGACAGACAGCACAGATGAGTCCCTGCTTCTAGGGTaGCCCATTGGTGCCAAGAGCATAACCACAGAGGTCCTTGACTAC | + |
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Preference number: 5 (lower is better) Translates to: TPVWTDSTDESLLLG*PIGAKSITTEVLDY Trigger: GTAGTCAAGGACCTCTGTGGTTATGCTCTTGGCACCAATGGGGCACCCTAGAAGCAGGGACTCATCTGTGCTGTCTGTCCATACTGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS TCA 90 bp | ATTGTCCACAATCTTGGCACTTGTCACGAAAGGGCATACATGGCCTaGGCATTTTGCTGGGCTTCCTTAGTGGTCCAGGCAGCAGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: IVHNLGTCHERAYMA*AFCWASLVVQAAAC Trigger: ACAAGCTGCTGCCTGGACCACTAAGGAAGCCCAGCAAAATGCTCAGGCCATGTATGCCCTTTCGTGACAAGTGCCAAGATTGTGGACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS GCA 90 bp | CCAGCATGTTCCTTGGGGAAAAAGCCAGAATACGGGTGTGCATTCTaGCATGACATCAACGTAGAGGGACGCAGATGTCAGATCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: PACSLGKKPEYGCAF*HDINVEGRRCQIFW Trigger: CCAGAAGATCTGACATCTGCGTCCCTCTACGTTGATGTCATGGCAGAATGCACACCCGTATTCTGGCTTTTTCCCCAAGGAACATGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS GCA 90 bp | AATCTTAAAATCCACCAGCATAACCAGATACCAGCTGCAAGCCAATaGCTACCACAGCCGTCCCTAGACAAGGTCTCCCACCCATTCTGC | + |
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Preference number: 5 (lower is better) Translates to: NLKIHQHNQIPAASQ*LPQPSLDKVSHPFC Trigger: GCAGAATGGGTGGGAGACCTTGTCTAGGGACGGCTGTGGTAGGCATTGGCTTGCAGCTGGTATCTGGTTATGCTGGTGGATTTTAAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS GCA 90 bp | GTGGCTAGTAGCATGTGCTGTGGATGTGGAATTGGTATGACTGGATaGACCAGGGTCTGCAGAAGCTGCACCAAGATTGTGACTGTACAC | + |
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Preference number: 5 (lower is better) Translates to: VASSMCCGCGIGMTG*TRVCRSCTKIVTVH Trigger: GTGTACAGTCACAATCTTGGTGCAGCTTCTGCAGACCCTGGTGCATCCAGTCATACCAATTCCACATCCACAGCACATGCTACTAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660361.1 |
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| CDS CCA 90 bp | GGCTTCCTTAGTGGTCCAGGCAGCAGCTTGTCCAGGGAGAATTCATaGTATCCTGAAGGGCTGAGTCTTTCAAGGTTTATGCCAAATCGC | + |
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Preference number: 5 (lower is better) Translates to: GFLSGPGSSLSRENS*YPEGLSLSRFMPNR Trigger: GCGATTTGGCATAAACCTTGAAAGACTCAGCCCTTCAGGATACCATGAATTCTCCCTGGACAAGCTGCTGCCTGGACCACTAAGGAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS GCA 90 bp | GGATGTGGAATTGGTATGACTGGATGCACCAGGGTCTGCAGAAGCTaGACCAAGATTGTGACTGTACACAGAGATCTTCAGCCTGAGATG | + |
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Preference number: 5 (lower is better) Translates to: GCGIGMTGCTRVCRS*TKIVTVHRDLQPEM Trigger: CATCTCAGGCTGAAGATCTCTGTGTACAGTCACAATCTTGGTGCAGCTTCTGCAGACCCTGGTGCATCCAGTCATACCAATTCCACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660361.1 |
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| CDS TCA 90 bp | ATGTTCCTTGGGGAAAAAGCCAGAATACGGGTGTGCATTCTGCCATaGCATCAACGTAGAGGGACGCAGATGTCAGATCTTCTGGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: MFLGEKARIRVCILP*HQRRGTQMSDLLAR Trigger: TCTTGCCAGAAGATCTGACATCTGCGTCCCTCTACGTTGATGTCATGGCAGAATGCACACCCGTATTCTGGCTTTTTCCCCAAGGAACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS GCA 90 bp | ATGTGCTGTGGATGTGGAATTGGTATGACTGGATGCACCAGGGTCTaGAGAAGCTGCACCAAGATTGTGACTGTACACAGAGATCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: MCCGCGIGMTGCTRV*RSCTKIVTVHRDLQ Trigger: CTGAAGATCTCTGTGTACAGTCACAATCTTGGTGCAGCTTCTGCAGACCCTGGTGCATCCAGTCATACCAATTCCACATCCACAGCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660361.1 |
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| CDS CCA 90 bp | TTTCATCCTCACTTAGGTAGTTGGACATGGAGCTGTCTGCCGACTTaGGAACCTCTCAGCCATGCATATAGGGCCATGATATTGCTAGAG | + |
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Preference number: 5 (lower is better) Translates to: FHPHLGSWTWSCLPT*EPLSHAYRAMILLE Trigger: CTCTAGCAATATCATGGCCCTATATGCATGGCTGAGAGGTTCCCAAGTCGGCAGACAGCTCCATGTCCAACTACCTAAGTGAGGATGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS GCA 90 bp | GGCCAGAAATGTATTTTAATGATCCTGGAAGTGGCTAGTAGCATGTaGTGTGGATGTGGAATTGGTATGACTGGATGCACCAGGGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: GQKCILMILEVASSM*CGCGIGMTGCTRVC Trigger: GCAGACCCTGGTGCATCCAGTCATACCAATTCCACATCCACAGCACATGCTACTAGCCACTTCCAGGATCATTAAAATACATTTCTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660361.1 |
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| CDS TCA 90 bp | ATCCAAACTCAACCCTCTGCCCTAAGACCTAAGGCAGAAAGGATCTaGCTACCTGTGGAACCGCGAGTTACTGTAATGCTTGTCACATTA | + |
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Preference number: 5 (lower is better) Translates to: IQTQPSALRPKAERI*LPVEPRVTVMLVTL Trigger: TAATGTGACAAGCATTACAGTAACTCGCGGTTCCACAGGTAGTCAGATCCTTTCTGCCTTAGGTCTTAGGGCAGAGGGTTGAGTTTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS CAA 90 bp | AGGGATGAGCCACAGGAGGACTGCAAAGAGGCTCAGCACAGATGGTaGTCACTCCAGCAGGACAGTCAGGGGCGAAGTGCTGGCTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RDEPQEDCKEAQHRW*SLQQDSQGRSAGCP Trigger: AGGGCAGCCAGCACTTCGCCCCTGACTGTCCTGCTGGAGTGACAACCATCTGTGCTGAGCCTCTTTGCAGTCCTCCTGTGGCTCATCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS GCA 72 bp | AAGGGCGGCTGTCCGAGGGATGAGCCACAGGAGGACTaGAAAGAGGCTCAGCACAGATGGTTGTCACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: KGGCPRDEPQED*KEAQHRWLSLQ Trigger: CTGGAGTGACAACCATCTGTGCTGAGCCTCTTTGCAGTCCTCCTGTGGCTCATCCCTCGGACAGCCGCCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS GCA 72 bp | CCACAGCCGTCCCTAGACAAGGTCTCCCACCCATTCTaGAGGGATTCCAAAAGTGCAGAGAACGGGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PQPSLDKVSHPF*RDSKSAENGAG Trigger: CCCTGCCCCGTTCTCTGCACTTTTGGAATCCCTGCAGAATGGGTGGGAGACCTTGTCTAGGGACGGCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS CCA 72 bp | GAGCCACAGGAGGACTGCAAAGAGGCTCAGCACAGATaGTTGTCACTCCAGCAGGACAGTCAGGGGCGAAGT | + |
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Preference number: 6 (lower is better) Translates to: EPQEDCKEAQHR*LSLQQDSQGRS Trigger: ACTTCGCCCCTGACTGTCCTGCTGGAGTGACAACCATCTGTGCTGAGCCTCTTTGCAGTCCTCCTGTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS CAA 72 bp | CCACAGGAGGACTGCAAAGAGGCTCAGCACAGATGGTaGTCACTCCAGCAGGACAGTCAGGGGCGAAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: PQEDCKEAQHRW*SLQQDSQGRSA Trigger: AGCACTTCGCCCCTGACTGTCCTGCTGGAGTGACAACCATCTGTGCTGAGCCTCTTTGCAGTCCTCCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS CAA 72 bp | GCCAAGAGCATAACCACAGAGGTCCTTGACTACTCCTaGCAACCCTTGCTGGACACCCCACTGCTCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: AKSITTEVLDYS*QPLLDTPLLLA Trigger: GGCCAGGAGCAGTGGGGTGTCCAGCAAGGGTTGCAAGGAGTAGTCAAGGACCTCTGTGGTTATGCTCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS TCA 72 bp | GCAGGACAGTCAGGGGCGAAGTGCTGGCTGCCCTTATaGGAGTTCGTCGCTGGCACTGTGACAGACGAAATT | + |
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Preference number: 6 (lower is better) Translates to: AGQSGAKCWLPL*EFVAGTVTDEI Trigger: AATTTCGTCTGTCACAGTGCCAGCGACGAACTCTCATAAGGGCAGCCAGCACTTCGCCCCTGACTGTCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS TCA 72 bp | AGGCACCCTGGAGTCTATGGGAGTCATGAGGCAGGATaGAGACCAGTCTTCTGGAAGAAACTGGGAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RHPGVYGSHEAG*RPVFWKKLGGQ Trigger: CTGCCCTCCCAGTTTCTTCCAGAAGACTGGTCTTCATCCTGCCTCATGACTCCCATAGACTCCAGGGTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS TCA 72 bp | CCCCATTGGTGCCAAGAGCATAACCACAGAGGTCCTTaGCTACTCCTTGCAACCCTTGCTGGACACCCCACT | + |
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Preference number: 6 (lower is better) Translates to: PHWCQEHNHRGP*LLLATLAGHPT Trigger: AGTGGGGTGTCCAGCAAGGGTTGCAAGGAGTAGTCAAGGACCTCTGTGGTTATGCTCTTGGCACCAATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS TCA 72 bp | ACTCAGGGACACACCAGTATGGACAGACAGCACAGATaGGTCCCTGCTTCTAGGGTGCCCCATTGGTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: TQGHTSMDRQHR*VPASRVPHWCQ Trigger: TTGGCACCAATGGGGCACCCTAGAAGCAGGGACTCATCTGTGCTGTCTGTCCATACTGGTGTGTCCCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS GCA 72 bp | ATCCACCAGCATAACCAGATACCAGCTGCAAGCCAATaGCTACCACAGCCGTCCCTAGACAAGGTCTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: IHQHNQIPAASQ*LPQPSLDKVSH Trigger: GTGGGAGACCTTGTCTAGGGACGGCTGTGGTAGGCATTGGCTTGCAGCTGGTATCTGGTTATGCTGGTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS GCA 72 bp | TGGACAGACAGCACAGATGAGTCCCTGCTTCTAGGGTaGCCCATTGGTGCCAAGAGCATAACCACAGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: WTDSTDESLLLG*PIGAKSITTEV Trigger: GACCTCTGTGGTTATGCTCTTGGCACCAATGGGGCACCCTAGAAGCAGGGACTCATCTGTGCTGTCTGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS CAA 90 bp | CAATCTTGGCACTTGTCACGAAAGGGCATACATGGCCTGAGCATTTaGCTGGGCTTCCTTAGTGGTCCAGGCAGCAGCTTGTCCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: QSWHLSRKGIHGLSI*LGFLSGPGSSLSRE Trigger: CTCCCTGGACAAGCTGCTGCCTGGACCACTAAGGAAGCCCAGCAAAATGCTCAGGCCATGTATGCCCTTTCGTGACAAGTGCCAAGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS CAA 72 bp | CACTTGTCACGAAAGGGCATACATGGCCTGAGCATTTaGCTGGGCTTCCTTAGTGGTCCAGGCAGCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: HLSRKGIHGLSI*LGFLSGPGSSL Trigger: CAAGCTGCTGCCTGGACCACTAAGGAAGCCCAGCAAAATGCTCAGGCCATGTATGCCCTTTCGTGACAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS CAA 90 bp | GGAGAAAAGGCCAGCTGCAAGGCAACCCACAGTCCTGACAGGGATTaGGGCAGTCGGGTGTTAATTCTTGGTGATGCCAATTCAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GEKASCKATHSPDRD*GSRVLILGDANSGC Trigger: ACAGCCTGAATTGGCATCACCAAGAATTAACACCCGACTGCCCAAATCCCTGTCAGGACTGTGGGTTGCCTTGCAGCTGGCCTTTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS CAA 90 bp | GGCCTGAGCATTTTGCTGGGCTTCCTTAGTGGTCCAGGCAGCAGCTaGTCCAGGGAGAATTCATGGTATCCTGAAGGGCTGAGTCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: GLSILLGFLSGPGSS*SRENSWYPEGLSLS Trigger: TGAAAGACTCAGCCCTTCAGGATACCATGAATTCTCCCTGGACAAGCTGCTGCCTGGACCACTAAGGAAGCCCAGCAAAATGCTCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS CCA 72 bp | ATGAGGCAGGATGAAGACCAGTCTTCTGGAAGAAACTaGGAGGGCAGTGTGGCCTTTTGCGGTCATCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: MRQDEDQSSGRN*EGSVAFCGHLL Trigger: AAGCAGATGACCGCAAAAGGCCACACTGCCCTCCCAGTTTCTTCCAGAAGACTGGTCTTCATCCTGCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS CAA 72 bp | ATTTTGCTGGGCTTCCTTAGTGGTCCAGGCAGCAGCTaGTCCAGGGAGAATTCATGGTATCCTGAAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ILLGFLSGPGSS*SRENSWYPEGL Trigger: CAGCCCTTCAGGATACCATGAATTCTCCCTGGACAAGCTGCTGCCTGGACCACTAAGGAAGCCCAGCAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS TCA 72 bp | AATCTTGGCACTTGTCACGAAAGGGCATACATGGCCTaGGCATTTTGCTGGGCTTCCTTAGTGGTCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: NLGTCHERAYMA*AFCWASLVVQA Trigger: TGCCTGGACCACTAAGGAAGCCCAGCAAAATGCTCAGGCCATGTATGCCCTTTCGTGACAAGTGCCAAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS GCA 72 bp | TCCTTGGGGAAAAAGCCAGAATACGGGTGTGCATTCTaGCATGACATCAACGTAGAGGGACGCAGATGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SLGKKPEYGCAF*HDINVEGRRCQ Trigger: CTGACATCTGCGTCCCTCTACGTTGATGTCATGGCAGAATGCACACCCGTATTCTGGCTTTTTCCCCAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS GCA 72 bp | AGCATGTGCTGTGGATGTGGAATTGGTATGACTGGATaGACCAGGGTCTGCAGAAGCTGCACCAAGATTGTG | + |
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Preference number: 6 (lower is better) Translates to: SMCCGCGIGMTG*TRVCRSCTKIV Trigger: CACAATCTTGGTGCAGCTTCTGCAGACCCTGGTGCATCCAGTCATACCAATTCCACATCCACAGCACATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660361.1 |
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| CDS CCA 72 bp | CACTTAGGTAGTTGGACATGGAGCTGTCTGCCGACTTaGGAACCTCTCAGCCATGCATATAGGGCCATGATA | + |
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Preference number: 6 (lower is better) Translates to: HLGSWTWSCLPT*EPLSHAYRAMI Trigger: TATCATGGCCCTATATGCATGGCTGAGAGGTTCCCAAGTCGGCAGACAGCTCCATGTCCAACTACCTAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS TCA 72 bp | AAAAAGAGGGAGGCACCCTGGAGTCTATGGGAGTCATaGGGCAGGATGAAGACCAGTCTTCTGGAAGAAACT | + |
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Preference number: 6 (lower is better) Translates to: KKREAPWSLWES*GRMKTSLLEET Trigger: AGTTTCTTCCAGAAGACTGGTCTTCATCCTGCCTCATGACTCCCATAGACTCCAGGGTGCCTCCCTCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS TCA 72 bp | GGGGAAAAAGCCAGAATACGGGTGTGCATTCTGCCATaGCATCAACGTAGAGGGACGCAGATGTCAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: GEKARIRVCILP*HQRRGTQMSDL Trigger: AAGATCTGACATCTGCGTCCCTCTACGTTGATGTCATGGCAGAATGCACACCCGTATTCTGGCTTTTTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS GCA 72 bp | GGATGTGGAATTGGTATGACTGGATGCACCAGGGTCTaGAGAAGCTGCACCAAGATTGTGACTGTACACAGA | + |
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Preference number: 6 (lower is better) Translates to: GCGIGMTGCTRV*RSCTKIVTVHR Trigger: TCTGTGTACAGTCACAATCTTGGTGCAGCTTCTGCAGACCCTGGTGCATCCAGTCATACCAATTCCACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660361.1 |
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| CDS CCA 72 bp | AGTGGTCCAGGCAGCAGCTTGTCCAGGGAGAATTCATaGTATCCTGAAGGGCTGAGTCTTTCAAGGTTTATG | + |
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Preference number: 6 (lower is better) Translates to: SGPGSSLSRENS*YPEGLSLSRFM Trigger: CATAAACCTTGAAAGACTCAGCCCTTCAGGATACCATGAATTCTCCCTGGACAAGCTGCTGCCTGGACCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS CCA 72 bp | AGACTTTGGTTTCATCCTCACTTAGGTAGTTGGACATaGAGCTGTCTGCCGACTTGGGAACCTCTCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RLWFHPHLGSWT*SCLPTWEPLSH Trigger: ATGGCTGAGAGGTTCCCAAGTCGGCAGACAGCTCCATGTCCAACTACCTAAGTGAGGATGAAACCAAAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS CCA 72 bp | ACTGGAAGACTTTGGTTTCATCCTCACTTAGGTAGTTaGACATGGAGCTGTCTGCCGACTTGGGAACCTCTC | + |
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Preference number: 6 (lower is better) Translates to: TGRLWFHPHLGS*TWSCLPTWEPL Trigger: GAGAGGTTCCCAAGTCGGCAGACAGCTCCATGTCCAACTACCTAAGTGAGGATGAAACCAAAGTCTTCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS TCA 72 bp | AGGCAGCAGCTTGTCCAGGGAGAATTCATGGTATCCTaGAGGGCTGAGTCTTTCAAGGTTTATGCCAAATCG | + |
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Preference number: 6 (lower is better) Translates to: RQQLVQGEFMVS*RAESFKVYAKS Trigger: CGATTTGGCATAAACCTTGAAAGACTCAGCCCTTCAGGATACCATGAATTCTCCCTGGACAAGCTGCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS GCA 72 bp | ATTGGTATGACTGGATGCACCAGGGTCTGCAGAAGCTaGACCAAGATTGTGACTGTACACAGAGATCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: IGMTGCTRVCRS*TKIVTVHRDLQ Trigger: CTGAAGATCTCTGTGTACAGTCACAATCTTGGTGCAGCTTCTGCAGACCCTGGTGCATCCAGTCATACCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660361.1 |
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| CDS TCA 72 bp | GCTTGTCCAGGGAGAATTCATGGTATCCTGAAGGGCTaGGTCTTTCAAGGTTTATGCCAAATCGCTAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: ACPGRIHGILKG*VFQGLCQIAKP Trigger: AGGCTTAGCGATTTGGCATAAACCTTGAAAGACTCAGCCCTTCAGGATACCATGAATTCTCCCTGGACAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS TCA 72 bp | AGGCTTCCTATACAAGTATTCTGGGCCACCTCTCATTaGACCTCCCCCACATTTACACATCATACCCACTCA | + |
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Preference number: 6 (lower is better) Translates to: RLPIQVFWATSH*TSPTFTHHTHS Trigger: TGAGTGGGTATGATGTGTAAATGTGGGGGAGGTTCAATGAGAGGTGGCCCAGAATACTTGTATAGGAAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS CAA 72 bp | GCCCAAATAACAGGAGTCAGCCAAGACCACCCTGACTaGAAGAAGATTCTCCATCGTGAAACAGTTATCACT | + |
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Preference number: 6 (lower is better) Translates to: AQITGVSQDHPD*KKILHRETVIT Trigger: AGTGATAACTGTTTCACGATGGAGAATCTTCTTCAAGTCAGGGTGGTCTTGGCTGACTCCTGTTATTTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS CAA 72 bp | GTCTTCTGGAAGAAACTGGGAGGGCAGTGTGGCCTTTaGCGGTCATCTGCTTTGCCATTTATTAAAGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: VFWKKLGGQCGL*RSSALPFIKVK Trigger: TTTTACTTTAATAAATGGCAAAGCAGATGACCGCAAAAGGCCACACTGCCCTCCCAGTTTCTTCCAGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS CAA 72 bp | GAGTTCGTCGCTGGCACTGTGACAGACGAAATTCACTaGACGATTAAGGAGATGGTTTTATTCAAGCTAGTG | + |
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Preference number: 6 (lower is better) Translates to: EFVAGTVTDEIH*TIKEMVLFKLV Trigger: CACTAGCTTGAATAAAACCATCTCCTTAATCGTCAAGTGAATTTCGTCTGTCACAGTGCCAGCGACGAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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| CDS CAA 90 bp | GTTATACAAGCCCAAATAACAGGAGTCAGCCAAGACCACCCTGACTaGAAGAAGATTCTCCATCGTGAAACAGTTATCACTGAGCAATCT | + |
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Preference number: 6 (lower is better) Translates to: VIQAQITGVSQDHPD*KKILHRETVITEQS Trigger: AGATTGCTCAGTGATAACTGTTTCACGATGGAGAATCTTCTTCAAGTCAGGGTGGTCTTGGCTGACTCCTGTTATTTGGGCTTGTATAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415174.1 |
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| CDS TCA 72 bp | ACGATTAAGGAGATGGTTTTATTCAAGCTAGTGCCATaGAGAGAATGCTCATTAATGAGGGACATCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: TIKEMVLFKLVP*RECSLMRDISK Trigger: CTTTGAGATGTCCCTCATTAATGAGCATTCTCTTCATGGCACTAGCTTGAATAAAACCATCTCCTTAATCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415174.1 ENST00000660361.1 |
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