Pregenerated sensors for LINC01902 (Homo sapiens)
Ensembl gene IDs: ENSG00000283503Ensembl transcript IDs: ENST00000636467.2, ENST00000636983.1, ENST00000637369.1, ENST00000659647.1, ENST00000660142.1, ENST00000663227.1, ENST00000668049.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGGGTCTCCTGCGGCAGACCAGGGGTGTTGCGGGCTGCGCTGGGTaGGGGACCGCGCGCTGCACGTGCAGTGCCGCCCGGACGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: QGLLRQTRGVAGCAG*GTARCTCSAARTAA Trigger: CGCCGCCGTCCGGGCGGCACTGCACGTGCAGCGCGCGGTCCCCCACCCAGCGCAGCCCGCAACACCCCTGGTCTGCCGCAGGAGACCCTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000663227.1 |
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| CDS GCA 90 bp | TGTTGCGGGCTGCGCTGGGTGGGGGACCGCGCGCTGCACGTGCAGTaGCGCCCGGACGGCGGCGAAAGGACAGCGGTGCACCCCGCCCGA | + |
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Preference number: 5 (lower is better) Translates to: CCGLRWVGDRALHVQ*RPDGGERTAVHPAR Trigger: TCGGGCGGGGTGCACCGCTGTCCTTTCGCCGCCGTCCGGGCGGCACTGCACGTGCAGCGCGCGGTCCCCCACCCAGCGCAGCCCGCAACA 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663227.1 |
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| CDS GCA 90 bp | TGGCATCGGCAGGGTCTCCTGCGGCAGACCAGGGGTGTTGCGGGCTaGGCTGGGTGGGGGACCGCGCGCTGCACGTGCAGTGCCGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: WHRQGLLRQTRGVAG*AGWGTARCTCSAAR Trigger: CCGGGCGGCACTGCACGTGCAGCGCGCGGTCCCCCACCCAGCGCAGCCCGCAACACCCCTGGTCTGCCGCAGGAGACCCTGCCGATGCCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000663227.1 |
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| CDS GCA 90 bp | CAGACCAGGGGTGTTGCGGGCTGCGCTGGGTGGGGGACCGCGCGCTaGACGTGCAGTGCCGCCCGGACGGCGGCGAAAGGACAGCGGTGC | + |
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Preference number: 5 (lower is better) Translates to: QTRGVAGCAGWGTAR*TCSAARTAAKGQRC Trigger: GCACCGCTGTCCTTTCGCCGCCGTCCGGGCGGCACTGCACGTGCAGCGCGCGGTCCCCCACCCAGCGCAGCCCGCAACACCCCTGGTCTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663227.1 |
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| CDS GCA 90 bp | CACCGCGCCAGAGTCTTGACCCTGAGTGGCATCGGCAGGGTCTCCTaGGGCAGACCAGGGGTGTTGCGGGCTGCGCTGGGTGGGGGACCG | + |
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Preference number: 5 (lower is better) Translates to: HRARVLTLSGIGRVS*GRPGVLRAALGGGP Trigger: CGGTCCCCCACCCAGCGCAGCCCGCAACACCCCTGGTCTGCCGCAGGAGACCCTGCCGATGCCACTCAGGGTCAAGACTCTGGCGCGGTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000663227.1 |
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| CDS CCA 90 bp | CCTTTTGCTCTGCAGTTTCCACCGCGCCAGAGTCTTGACCCTGAGTaGCATCGGCAGGGTCTCCTGCGGCAGACCAGGGGTGTTGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: PFALQFPPRQSLDPE*HRQGLLRQTRGVAG Trigger: GCCCGCAACACCCCTGGTCTGCCGCAGGAGACCCTGCCGATGCCACTCAGGGTCAAGACTCTGGCGCGGTGGAAACTGCAGAGCAAAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000663227.1 |
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| CDS GCA 90 bp | AGACACCAGTCTGCCCTGGCACTGAGTTTGGAGTTCTTAGGTGATTaGCATCCAAGTTCCTCTCTGGCAAAGCCCCACATGCTCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: RHQSALALSLEFLGD*HPSSSLAKPHMLSL Trigger: GAGAGAGAGCATGTGGGGCTTTGCCAGAGAGGAACTTGGATGGCAATCACCTAAGAACTCCAAACTCAGTGCCAGGGCAGACTGGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000636467.2 ENST00000636983.1 ENST00000637369.1 ENST00000663227.1 ENST00000668049.1 |
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| CDS TCA 90 bp | TGGCCTGTTTATAACCAGGCTACGCAGCAGGAGGTAAGCAGCAGGTaGGTGAGCAAAGCGTCATCTGTATTTCCAGACACATTACCACCT | + |
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Preference number: 5 (lower is better) Translates to: WPVYNQATQQEVSSR*VSKASSVFPDTLPP Trigger: AGGTGGTAATGTGTCTGGAAATACAGATGACGCTTTGCTCACTCACCTGCTGCTTACCTCCTGCTGCGTAGCCTGGTTATAAACAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS CCA 90 bp | AGGATTCAACTGCCATTAGGCAGTTGTGGTCACCTTCCTTTGAGATaGCCCCAAGTGATGCCTGCTTCTTACCCTTATGTACAGGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: RIQLPLGSCGHLPLR*PQVMPASYPYVQGH Trigger: ATGACCCTGTACATAAGGGTAAGAAGCAGGCATCACTTGGGGCCATCTCAAAGGAAGGTGACCACAACTGCCTAATGGCAGTTGAATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS TCA 90 bp | TTGCAGAGAAGAACACATCATAACGCTGGTCAGTTTGAGCGGGACTaGATATGCAGTGTGAATCCACGTTACAGGAACAGATGCCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: LQRRTHHNAGQFERD*ICSVNPRYRNRCPV Trigger: CACTGGGCATCTGTTCCTGTAACGTGGATTCACACTGCATATTCAGTCCCGCTCAAACTGACCAGCGTTATGATGTGTTCTTCTCTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659647.1 ENST00000660142.1 |
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| CDS CCA 90 bp | CTCTACACACAGTACTATGGCACTGAAGAGTTATTGGGGACTAATTaGCCAAGCAGGCATATATTCCAGCATCTTTCAAAGACCAAGACG | + |
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Preference number: 5 (lower is better) Translates to: LYTQYYGTEELLGTN*PSRHIFQHLSKTKT Trigger: CGTCTTGGTCTTTGAAAGATGCTGGAATATATGCCTGCTTGGCCAATTAGTCCCCAATAACTCTTCAGTGCCATAGTACTGTGTGTAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000636467.2 ENST00000637369.1 ENST00000663227.1 ENST00000668049.1 |
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| CDS GCA 90 bp | TCTTTTTCACACACCAAGATGGTTTGTCAGTGCATTGTGATTGTGTaGCAGGAGACACCTCATTACTGGTCTAAGAGAACAATTGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SFSHTKMVCQCIVIV*QETPHYWSKRTIAG Trigger: TCCTGCAATTGTTCTCTTAGACCAGTAATGAGGTGTCTCCTGGCACACAATCACAATGCACTGACAAACCATCTTGGTGTGTGAAAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS TCA 90 bp | TTTCTGAGTCTTTTTCACACACCAAGATGGTTTGTCAGTGCATTGTaGTTGTGTGCCAGGAGACACCTCATTACTGGTCTAAGAGAACAA | + |
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Preference number: 5 (lower is better) Translates to: FLSLFHTPRWFVSAL*LCARRHLITGLREQ Trigger: TTGTTCTCTTAGACCAGTAATGAGGTGTCTCCTGGCACACAATCACAATGCACTGACAAACCATCTTGGTGTGTGAAAAAGACTCAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS GCA 90 bp | CTTGGAGATTGGCTTACAGAGCTCTGCCTAACCCCAGATATTAATTaGTTGCCTTTTATAGTCATCACGTTCACCTACTTGAACATCAAG | + |
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Preference number: 5 (lower is better) Translates to: LGDWLTELCLTPDIN*LPFIVITFTYLNIK Trigger: CTTGATGTTCAAGTAGGTGAACGTGATGACTATAAAAGGCAAGCAATTAATATCTGGGGTTAGGCAGAGCTCTGTAAGCCAATCTCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS GCA 90 bp | TTGGATTTTTCTGAGTCTTTTTCACACACCAAGATGGTTTGTCAGTaGATTGTGATTGTGTGCCAGGAGACACCTCATTACTGGTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: LDFSESFSHTKMVCQ*IVIVCQETPHYWSK Trigger: CTTAGACCAGTAATGAGGTGTCTCCTGGCACACAATCACAATGCACTGACAAACCATCTTGGTGTGTGAAAAAGACTCAGAAAAATCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS TCA 90 bp | TGGTATGTCACTTTCTACATTAGGTTAGGAAAGACATTGAGCCATTaGGAGTCATATATAAGGCTTCGTTATGAAGCCTCAGGGCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: WYVTFYIRLGKTLSH*ESYIRLRYEASGLR Trigger: CCTAAGCCCTGAGGCTTCATAACGAAGCCTTATATATGACTCTCAATGGCTCAATGTCTTTCCTAACCTAATGTAGAAAGTGACATACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS GCA 90 bp | CTATTTGTTCCAATGAGGATGCTAGTGTCAGAGAAAGGTTTGAGATaGAGTCTGAGCTTCCCAGAGAATGCCTTTATTAGGATAATTCCA | + |
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Preference number: 5 (lower is better) Translates to: LFVPMRMLVSEKGLR*SLSFPENAFIRIIP Trigger: TGGAATTATCCTAATAAAGGCATTCTCTGGGAAGCTCAGACTGCATCTCAAACCTTTCTCTGACACTAGCATCCTCATTGGAACAAATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS GCA 90 bp | GAAGTCTCTGGTGAAGTGGAACTATGCTTGCTAGTAGTGTCACATTaGTTGGATTTTTCTGAGTCTTTTTCACACACCAAGATGGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: EVSGEVELCLLVVSH*LDFSESFSHTKMVC Trigger: ACAAACCATCTTGGTGTGTGAAAAAGACTCAGAAAAATCCAAGCAATGTGACACTACTAGCAAGCATAGTTCCACTTCACCAGAGACTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS GCA 90 bp | TGTAAAAACATGAAAGGATTCAATTCGTTTTGTTTGAGGGCACATTaGAGAGAAGAACACATCATAACGCTGGTCAGTTTGAGCGGGACT | + |
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Preference number: 5 (lower is better) Translates to: CKNMKGFNSFCLRAH*REEHIITLVSLSGT Trigger: AGTCCCGCTCAAACTGACCAGCGTTATGATGTGTTCTTCTCTGCAATGTGCCCTCAAACAAAACGAATTGAATCCTTTCATGTTTTTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659647.1 ENST00000660142.1 |
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| CDS TCA 90 bp | TTTCTTTCCTCCTTCTTTGGGATAGGAAGGATGTGGATAAGTGTGTaGGAGCAGAGGAAGATTTATTATATAGACAGTGGATGGGTCATA | + |
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Preference number: 5 (lower is better) Translates to: FLSSFFGIGRMWISV*EQRKIYYIDSGWVI Trigger: TATGACCCATCCACTGTCTATATAATAAATCTTCCTCTGCTCTCACACACTTATCCACATCCTTCCTATCCCAAAGAAGGAGGAAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS TCA 90 bp | AGTGGAACTATGCTTGCTAGTAGTGTCACATTGCTTGGATTTTTCTaGGTCTTTTTCACACACCAAGATGGTTTGTCAGTGCATTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: SGTMLASSVTLLGFF*VFFTHQDGLSVHCD Trigger: ATCACAATGCACTGACAAACCATCTTGGTGTGTGAAAAAGACTCAGAAAAATCCAAGCAATGTGACACTACTAGCAAGCATAGTTCCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS CCA 90 bp | GAGCTCCTCCTCTGTTTGTGTTACTTTGCTAAAATAATCAGTGACTaGAAAATCACGTGGATAACTTCAGCATTTCCCAGAAGTAGTACA | + |
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Preference number: 5 (lower is better) Translates to: ELLLCLCYFAKIISD*KITWITSAFPRSST Trigger: TGTACTACTTCTGGGAAATGCTGAAGTTATCCACGTGATTTTCCAGTCACTGATTATTTTAGCAAAGTAACACAAACAGAGGAGGAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000637369.1 ENST00000663227.1 ENST00000668049.1 |
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| CDS TCA 90 bp | ACAGAAACAAATTATCTCAGAGCTGAGGCTAAAATAACTACAATTTaGGCAGTCACCTACTGCAAACAAGGCAGAGCTTGCAGTTTGATA | + |
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Preference number: 5 (lower is better) Translates to: TETNYLRAEAKITTI*AVTYCKQGRACSLI Trigger: TATCAAACTGCAAGCTCTGCCTTGTTTGCAGTAGGTGACTGCTCAAATTGTAGTTATTTTAGCCTCAGCTCTGAGATAATTTGTTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000636467.2 ENST00000637369.1 ENST00000663227.1 ENST00000668049.1 |
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| CDS TCA 90 bp | AGTGGCTCAGTGCATATGATGCCTCAATCTTCCATTGACCTTACATaGACTTCATTGAGCCATTTTATCAGGGTAATCTATACATTTCAT | + |
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Preference number: 5 (lower is better) Translates to: SGSVHMMPQSSIDLT*TSLSHFIRVIYTFH Trigger: ATGAAATGTATAGATTACCCTGATAAAATGGCTCAATGAAGTTCATGTAAGGTCAATGGAAGATTGAGGCATCATATGCACTGAGCCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS GCA 90 bp | TTATTGCTTGGTAGATACATGTTTCAGTGTGTATGTGGAGCTACATaGAACTTTATTTCCACAGCCTTCCTAGCATCTAAAAACCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: LLLGRYMFQCVCGAT*NFISTAFLASKNQR Trigger: TCTTTGGTTTTTAGATGCTAGGAAGGCTGTGGAAATAAAGTTGCATGTAGCTCCACATACACACTGAAACATGTATCTACCAAGCAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS GCA 72 bp | GCGGGCTGCGCTGGGTGGGGGACCGCGCGCTGCACGTaGAGTGCCGCCCGGACGGCGGCGAAAGGACAGCGG | + |
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Preference number: 6 (lower is better) Translates to: AGCAGWGTARCT*SAARTAAKGQR Trigger: CCGCTGTCCTTTCGCCGCCGTCCGGGCGGCACTGCACGTGCAGCGCGCGGTCCCCCACCCAGCGCAGCCCGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663227.1 |
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| CDS CCA 72 bp | CTGCGGCAGACCAGGGGTGTTGCGGGCTGCGCTGGGTaGGGGACCGCGCGCTGCACGTGCAGTGCCGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: LRQTRGVAGCAG*GTARCTCSAAR Trigger: CCGGGCGGCACTGCACGTGCAGCGCGCGGTCCCCCACCCAGCGCAGCCCGCAACACCCCTGGTCTGCCGCAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000663227.1 |
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| CDS GCA 72 bp | CTGCGCTGGGTGGGGGACCGCGCGCTGCACGTGCAGTaGCGCCCGGACGGCGGCGAAAGGACAGCGGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: LRWVGDRALHVQ*RPDGGERTAVH Trigger: GTGCACCGCTGTCCTTTCGCCGCCGTCCGGGCGGCACTGCACGTGCAGCGCGCGGTCCCCCACCCAGCGCAG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663227.1 |
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| CDS GCA 72 bp | CAGGGTCTCCTGCGGCAGACCAGGGGTGTTGCGGGCTaGGCTGGGTGGGGGACCGCGCGCTGCACGTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: QGLLRQTRGVAG*AGWGTARCTCS Trigger: ACTGCACGTGCAGCGCGCGGTCCCCCACCCAGCGCAGCCCGCAACACCCCTGGTCTGCCGCAGGAGACCCTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000663227.1 |
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| CDS CAA 90 bp | ACCCTGAGTGGCATCGGCAGGGTCTCCTGCGGCAGACCAGGGGTGTaGCGGGCTGCGCTGGGTGGGGGACCGCGCGCTGCACGTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: TLSGIGRVSCGRPGV*RAALGGGPRAARAV Trigger: CACTGCACGTGCAGCGCGCGGTCCCCCACCCAGCGCAGCCCGCAACACCCCTGGTCTGCCGCAGGAGACCCTGCCGATGCCACTCAGGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000663227.1 |
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| CDS GCA 72 bp | AGAGTCTTGACCCTGAGTGGCATCGGCAGGGTCTCCTaGGGCAGACCAGGGGTGTTGCGGGCTGCGCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: RVLTLSGIGRVS*GRPGVLRAALG Trigger: ACCCAGCGCAGCCCGCAACACCCCTGGTCTGCCGCAGGAGACCCTGCCGATGCCACTCAGGGTCAAGACTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000663227.1 |
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| CDS CCA 72 bp | CTGCAGTTTCCACCGCGCCAGAGTCTTGACCCTGAGTaGCATCGGCAGGGTCTCCTGCGGCAGACCAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: LQFPPRQSLDPE*HRQGLLRQTRG Trigger: ACCCCTGGTCTGCCGCAGGAGACCCTGCCGATGCCACTCAGGGTCAAGACTCTGGCGCGGTGGAAACTGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000663227.1 |
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| CDS CAA 72 bp | TTCCTTTTGCTCTGCAGTTTCCACCGCGCCAGAGTCTaGACCCTGAGTGGCATCGGCAGGGTCTCCTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: FLLLCSFHRARV*TLSGIGRVSCG Trigger: GCCGCAGGAGACCCTGCCGATGCCACTCAGGGTCAAGACTCTGGCGCGGTGGAAACTGCAGAGCAAAAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000636467.2 ENST00000636983.1 ENST00000637369.1 ENST00000663227.1 |
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| CDS CAA 90 bp | TGTCTGTGTTTCCTTTTGCTCTGCAGTTTCCACCGCGCCAGAGTCTaGACCCTGAGTGGCATCGGCAGGGTCTCCTGCGGCAGACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: CLCFLLLCSFHRARV*TLSGIGRVSCGRPG Trigger: CCCTGGTCTGCCGCAGGAGACCCTGCCGATGCCACTCAGGGTCAAGACTCTGGCGCGGTGGAAACTGCAGAGCAAAAGGAAACACAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000636467.2 ENST00000636983.1 ENST00000637369.1 ENST00000663227.1 |
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| CDS GCA 72 bp | TCTGCCCTGGCACTGAGTTTGGAGTTCTTAGGTGATTaGCATCCAAGTTCCTCTCTGGCAAAGCCCCACATG | + |
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Preference number: 6 (lower is better) Translates to: SALALSLEFLGD*HPSSSLAKPHM Trigger: CATGTGGGGCTTTGCCAGAGAGGAACTTGGATGGCAATCACCTAAGAACTCCAAACTCAGTGCCAGGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000636467.2 ENST00000636983.1 ENST00000637369.1 ENST00000663227.1 ENST00000668049.1 |
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| CDS TCA 72 bp | CACCCTCCTCATCCTCCCAAAGTGCTGGGTCACCAGTaGGTTAGCTGCACACAAGAAGCAATCAGACAGTTA | + |
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Preference number: 6 (lower is better) Translates to: HPPHPPKVLGHQ*VSCTQEAIRQL Trigger: TAACTGTCTGATTGCTTCTTGTGTGCAGCTAACTCACTGGTGACCCAGCACTTTGGGAGGATGAGGAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000636467.2 ENST00000637369.1 ENST00000660142.1 |
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| CDS TCA 72 bp | ACGCTGGTCAGTTTGAGCGGGACTGAATATGCAGTGTaGATCCACGTTACAGGAACAGATGCCCAGTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: TLVSLSGTEYAV*IHVTGTDAQWE Trigger: TTCCCACTGGGCATCTGTTCCTGTAACGTGGATTCACACTGCATATTCAGTCCCGCTCAAACTGACCAGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659647.1 ENST00000660142.1 |
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| CDS GCA 72 bp | TGGTCACCTTCCTTTGAGATGGCCCCAAGTGATGCCTaGTTCTTACCCTTATGTACAGGGTCATCCCACATT | + |
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Preference number: 6 (lower is better) Translates to: WSPSFEMAPSDA*FLPLCTGSSHI Trigger: AATGTGGGATGACCCTGTACATAAGGGTAAGAAGCAGGCATCACTTGGGGCCATCTCAAAGGAAGGTGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS GCA 72 bp | ACTGTCTCCCATCATCCCCATATGGGACCATCTAGTTaGAGGAAAACAAGCTCAGGGCTCCCAGTGATTCTA | + |
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Preference number: 6 (lower is better) Translates to: TVSHHPHMGPSS*RKTSSGLPVIL Trigger: TAGAATCACTGGGAGCCCTGAGCTTGTTTTCCTGCAACTAGATGGTCCCATATGGGGATGATGGGAGACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS CAA 72 bp | ATTCAACTGCCATTAGGCAGTTGTGGTCACCTTCCTTaGAGATGGCCCCAAGTGATGCCTGCTTCTTACCCT | + |
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Preference number: 6 (lower is better) Translates to: IQLPLGSCGHLP*RWPQVMPASYP Trigger: AGGGTAAGAAGCAGGCATCACTTGGGGCCATCTCAAAGGAAGGTGACCACAACTGCCTAATGGCAGTTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS TCA 72 bp | CACCCTCCTCATCCTCCCAAAGTGCTGGGTCACCAGTaGGTTAGCTCTTTCCAATATTTTGCTGATTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: HPPHPPKVLGHQ*VSSFQYFADFA Trigger: GGCAAAATCAGCAAAATATTGGAAAGAGCTAACTCACTGGTGACCCAGCACTTTGGGAGGATGAGGAGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663227.1 ENST00000668049.1 |
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| CDS GCA 72 bp | AATGCAAGACAGTATCCCCATCAGCCTTTGCAGGTCTaGCTCATAGTCAGTGTGGACTTTCTACAAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: NARQYPHQPLQV*LIVSVDFLQAD Trigger: ATCTGCTTGTAGAAAGTCCACACTGACTATGAGGCAGACCTGCAAAGGCTGATGGGGATACTGTCTTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659647.1 ENST00000660142.1 |
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| CDS CCA 72 bp | AGGTTACAGTTAAGGACAAAGGAGCTTGCACATTCTTaGAGATTGGCTTACAGAGCTCTGCCTAACCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RLQLRTKELAHS*RLAYRALPNPR Trigger: TCTGGGGTTAGGCAGAGCTCTGTAAGCCAATCTCCAAGAATGTGCAAGCTCCTTTGTCCTTAACTGTAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS GCA 72 bp | CCAATGAGGATGCTAGTGTCAGAGAAAGGTTTGAGATaGAGTCTGAGCTTCCCAGAGAATGCCTTTATTAGG | + |
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Preference number: 6 (lower is better) Translates to: PMRMLVSEKGLR*SLSFPENAFIR Trigger: CCTAATAAAGGCATTCTCTGGGAAGCTCAGACTGCATCTCAAACCTTTCTCTGACACTAGCATCCTCATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS GCA 72 bp | GGTATGTATCTCTCTCTTCCAGACAGCTATTATCTCTaGCAGCTGGTATCTATTGTTTCGGGACTAGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: GMYLSLPDSYYL*QLVSIVSGLVD Trigger: GTCCACTAGTCCCGAAACAATAGATACCAGCTGGCAGAGATAATAGCTGTCTGGAAGAGAGAGATACATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000636467.2 ENST00000636983.1 ENST00000659647.1 ENST00000668049.1 |
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| CDS GCA 72 bp | CACACCAAGATGGTTTGTCAGTGCATTGTGATTGTGTaGCAGGAGACACCTCATTACTGGTCTAAGAGAACA | + |
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Preference number: 6 (lower is better) Translates to: HTKMVCQCIVIV*QETPHYWSKRT Trigger: TGTTCTCTTAGACCAGTAATGAGGTGTCTCCTGGCACACAATCACAATGCACTGACAAACCATCTTGGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS TCA 72 bp | GCCCAGTGGGAAGAATGCTTAGGAGCTAAAAGGCCCTaGACTATAAAATATTCAATAATGGACTCCGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: AQWEECLGAKRP*TIKYSIMDSGG Trigger: ACCTCCGGAGTCCATTATTGAATATTTTATAGTTCAGGGCCTTTTAGCTCCTAAGCATTCTTCCCACTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000659647.1 ENST00000660142.1 |
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| CDS CAA 72 bp | TTTGTTCCAATGAGGATGCTAGTGTCAGAGAAAGGTTaGAGATGCAGTCTGAGCTTCCCAGAGAATGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: FVPMRMLVSEKG*RCSLSFPENAF Trigger: AAAGGCATTCTCTGGGAAGCTCAGACTGCATCTCAAACCTTTCTCTGACACTAGCATCCTCATTGGAACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS TCA 72 bp | TTCACCCAGTCAGTAACCCTAGGAATCCATGAGACCTaGGCTGCTCAGATCAAATTTATTTTGAGAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: FTQSVTLGIHET*AAQIKFILRAH Trigger: ATGAGCTCTCAAAATAAATTTGATCTGAGCAGCTCAGGTCTCATGGATTCCTAGGGTTACTGACTGGGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS TCA 72 bp | CAACTAGCACAGCTATGTAAGGGGAAAGTGTACTCTTaGAGTCAGTCAATGGTGATGCTAAAGGATAGACAC | + |
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Preference number: 6 (lower is better) Translates to: QLAQLCKGKVYS*SQSMVMLKDRH Trigger: GTGTCTATCCTTTAGCATCACCATTGACTGACTTCAAGAGTACACTTTCCCCTTACATAGCTGTGCTAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS GCA 72 bp | TGGCTTACAGAGCTCTGCCTAACCCCAGATATTAATTaGTTGCCTTTTATAGTCATCACGTTCACCTACTTG | + |
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Preference number: 6 (lower is better) Translates to: WLTELCLTPDIN*LPFIVITFTYL Trigger: CAAGTAGGTGAACGTGATGACTATAAAAGGCAAGCAATTAATATCTGGGGTTAGGCAGAGCTCTGTAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS CAA 90 bp | GGAGATTGGCTTACAGAGCTCTGCCTAACCCCAGATATTAATTGCTaGCCTTTTATAGTCATCACGTTCACCTACTTGAACATCAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: GDWLTELCLTPDINC*PFIVITFTYLNIKK Trigger: CTTCTTGATGTTCAAGTAGGTGAACGTGATGACTATAAAAGGCAAGCAATTAATATCTGGGGTTAGGCAGAGCTCTGTAAGCCAATCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS CAA 90 bp | AAAGGGCTATTTGTTCCAATGAGGATGCTAGTGTCAGAGAAAGGTTaGAGATGCAGTCTGAGCTTCCCAGAGAATGCCTTTATTAGGATA | + |
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Preference number: 6 (lower is better) Translates to: KGLFVPMRMLVSEKG*RCSLSFPENAFIRI Trigger: TATCCTAATAAAGGCATTCTCTGGGAAGCTCAGACTGCATCTCAAACCTTTCTCTGACACTAGCATCCTCATTGGAACAAATAGCCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS CAA 90 bp | GAAAGGCAACTGTGTCAGAGATACAGAGGGTCAGTTTCTGTCCCATaGGTTAGAACATGGGCTCACTATTACTTAGTAAAGCAATTGTTC | + |
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Preference number: 6 (lower is better) Translates to: ERQLCQRYRGSVSVP*VRTWAHYYLVKQLF Trigger: GAACAATTGCTTTACTAAGTAATAGTGAGCCCATGTTCTAACCAATGGGACAGAAACTGACCCTCTGTATCTCTGACACAGTTGCCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS CAA 90 bp | CTGCCTCATAGTCAGTGTGGACTTTCTACAAGCAGATCAATTCCTTaGGCTAACTTAGCAAGAGCAGCACAATTTCCTCCACATCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: LPHSQCGLSTSRSIP*ANLARAAQFPPHQN Trigger: ATTTTGATGTGGAGGAAATTGTGCTGCTCTTGCTAAGTTAGCCAAAGGAATTGATCTGCTTGTAGAAAGTCCACACTGACTATGAGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659647.1 ENST00000660142.1 |
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| CDS TCA 72 bp | AACATGTTTCACCCAGTCAGTAACCCTAGGAATCCATaGGACCTGAGCTGCTCAGATCAAATTTATTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: NMFHPVSNPRNP*DLSCSDQIYFE Trigger: CTCAAAATAAATTTGATCTGAGCAGCTCAGGTCTCATGGATTCCTAGGGTTACTGACTGGGTGAAACATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS TCA 72 bp | AATTATCTCAGAGCTGAGGCTAAAATAACTACAATTTaGGCAGTCACCTACTGCAAACAAGGCAGAGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: NYLRAEAKITTI*AVTYCKQGRAC Trigger: GCAAGCTCTGCCTTGTTTGCAGTAGGTGACTGCTCAAATTGTAGTTATTTTAGCCTCAGCTCTGAGATAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000636467.2 ENST00000637369.1 ENST00000663227.1 ENST00000668049.1 |
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| CDS CCA 72 bp | TGCATTGTGATTGTGTGCCAGGAGACACCTCATTACTaGTCTAAGAGAACAATTGCAGGAATGTATTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: CIVIVCQETPHY*SKRTIAGMYSK Trigger: CTTAGAATACATTCCTGCAATTGTTCTCTTAGACCAGTAATGAGGTGTCTCCTGGCACACAATCACAATGCA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS CCA 72 bp | AATTTAGTAACAACAAGGGAACATCTTGATTGGGTTTaGTCAGTTCTGAGTGTTGGCTCTTTAGGTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: NLVTTREHLDWV*SVLSVGSLGAS Trigger: ACTGGCACCTAAAGAGCCAACACTCAGAACTGACCAAACCCAATCAAGATGTTCCCTTGTTGTTACTAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659647.1 ENST00000660142.1 |
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| CDS CAA 72 bp | CTTACAGAGCTCTGCCTAACCCCAGATATTAATTGCTaGCCTTTTATAGTCATCACGTTCACCTACTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LTELCLTPDINC*PFIVITFTYLN Trigger: GTTCAAGTAGGTGAACGTGATGACTATAAAAGGCAAGCAATTAATATCTGGGGTTAGGCAGAGCTCTGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS CAA 72 bp | AAACCTATTGTGAACCACACATGCAATGGATCTAGGTaGCAAGGATCTCAGTTCCTTGCTTCTTATGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: KPIVNHTCNGSR*QGSQFLASYEH Trigger: ATGCTCATAAGAAGCAAGGAACTGAGATCCTTGCAACCTAGATCCATTGCATGTGTGGTTCACAATAGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS TCA 72 bp | GAAACTGGTACAAGCCTCACAATAGATAAGAATGACTaGAAGTTTTCTGCATCCAGAATGTGGAACCCACAA | + |
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Preference number: 6 (lower is better) Translates to: ETGTSLTIDKND*KFSASRMWNPQ Trigger: TTGTGGGTTCCACATTCTGGATGCAGAAAACTTTCAGTCATTCTTATCTATTGTGAGGCTTGTACCAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS TCA 72 bp | TCCTTCTTTGGGATAGGAAGGATGTGGATAAGTGTGTaGGAGCAGAGGAAGATTTATTATATAGACAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SFFGIGRMWISV*EQRKIYYIDSG Trigger: TCCACTGTCTATATAATAAATCTTCCTCTGCTCTCACACACTTATCCACATCCTTCCTATCCCAAAGAAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS GCA 72 bp | GGTAGATACATGTTTCAGTGTGTATGTGGAGCTACATaGAACTTTATTTCCACAGCCTTCCTAGCATCTAAA | + |
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Preference number: 6 (lower is better) Translates to: GRYMFQCVCGAT*NFISTAFLASK Trigger: TTTAGATGCTAGGAAGGCTGTGGAAATAAAGTTGCATGTAGCTCCACATACACACTGAAACATGTATCTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS CCA 72 bp | TGTGTGAGAGCAGAGGAAGATTTATTATATAGACAGTaGATGGGTCATATTTCAAAGTGGAGTGTTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CVRAEEDLLYRQ*MGHISKWSVPG Trigger: TCCTGGAACACTCCACTTTGAAATATGACCCATCCACTGTCTATATAATAAATCTTCCTCTGCTCTCACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS CAA 72 bp | CATGAAAGGATTCAATTCGTTTTGTTTGAGGGCACATaGCAGAGAAGAACACATCATAACGCTGGTCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: HERIQFVLFEGT*QRRTHHNAGQF Trigger: AAACTGACCAGCGTTATGATGTGTTCTTCTCTGCAATGTGCCCTCAAACAAAACGAATTGAATCCTTTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659647.1 ENST00000660142.1 |
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| CDS TCA 72 bp | TGCCGGGCTAAGTGTCTAAGGTTGTGTGGAGATCGCTaGGTTAGATTATCTAAAAGTAATTCGAAAATCATA | + |
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Preference number: 6 (lower is better) Translates to: CRAKCLRLCGDR*VRLSKSNSKII Trigger: TATGATTTTCGAATTACTTTTAGATAATCTAACTCAGCGATCTCCACACAACCTTAGACACTTAGCCCGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS TCA 72 bp | TTCTTCACTGTCTCACGAACATGCAATACCGAGTACTaGCTTCATGGCTTATTTTGTGCTTTACTTCAATGT | + |
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Preference number: 6 (lower is better) Translates to: FFTVSRTCNTEY*LHGLFCALLQC Trigger: ACATTGAAGTAAAGCACAAAATAAGCCATGAAGTCAGTACTCGGTATTGCATGTTCGTGAGACAGTGAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS GCA 72 bp | TCTTTGACCGAAATGTTGGTAAAACGGAATGGAAGTTaGTTTTCATGTGCCAAGGTTACAGTTAAGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: SLTEMLVKRNGS*FSCAKVTVKDK Trigger: TTTGTCCTTAACTGTAACCTTGGCACATGAAAAGCAACTTCCATTCCGTTTTACCAACATTTCGGTCAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS CCA 72 bp | TTGGTCCATGTGACCAATAGGTTATGTTGGAAGCAATaGTATGTCACTTTCTACATTAGGTTAGGAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: LVHVTNRLCWKQ*YVTFYIRLGKT Trigger: TGTCTTTCCTAACCTAATGTAGAAAGTGACATACCATTGCTTCCAACATAACCTATTGGTCACATGGACCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS CAA 72 bp | AAAACTGCACCTGGTCTACCCTCTCCAATGGTAATCTaGTTCTCAGGTATTGATGTCTTATCATATTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: KTAPGLPSPMVI*FSGIDVLSYFL Trigger: CAAGAAATATGATAAGACATCAATACCTGAGAACAAGATTACCATTGGAGAGGGTAGACCAGGTGCAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS TCA 72 bp | GTGCATATGATGCCTCAATCTTCCATTGACCTTACATaGACTTCATTGAGCCATTTTATCAGGGTAATCTAT | + |
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Preference number: 6 (lower is better) Translates to: VHMMPQSSIDLT*TSLSHFIRVIY Trigger: ATAGATTACCCTGATAAAATGGCTCAATGAAGTTCATGTAAGGTCAATGGAAGATTGAGGCATCATATGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS TCA 72 bp | ACTTTCTACATTAGGTTAGGAAAGACATTGAGCCATTaGGAGTCATATATAAGGCTTCGTTATGAAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: TFYIRLGKTLSH*ESYIRLRYEAS Trigger: TGAGGCTTCATAACGAAGCCTTATATATGACTCTCAATGGCTCAATGTCTTTCCTAACCTAATGTAGAAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS CCA 72 bp | TACTTTGCTAAAATAATCAGTGACTGGAAAATCACGTaGATAACTTCAGCATTTCCCAGAAGTAGTACAACC | + |
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Preference number: 6 (lower is better) Translates to: YFAKIISDWKIT*ITSAFPRSSTT Trigger: GGTTGTACTACTTCTGGGAAATGCTGAAGTTATCCACGTGATTTTCCAGTCACTGATTATTTTAGCAAAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000637369.1 ENST00000663227.1 ENST00000668049.1 |
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| CDS CCA 72 bp | TGTCTCACGAACATGCAATACCGAGTACTGACTTCATaGCTTATTTTGTGCTTTACTTCAATGTGGTATTTA | + |
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Preference number: 6 (lower is better) Translates to: CLTNMQYRVLTS*LILCFTSMWYL Trigger: TAAATACCACATTGAAGTAAAGCACAAAATAAGCCATGAAGTCAGTACTCGGTATTGCATGTTCGTGAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS TCA 72 bp | CATCTAGTTGCAGGAAAACAAGCTCAGGGCTCCCAGTaGTTCTATTTTATAGTGAGTTGTATAATTATTTCA | + |
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Preference number: 6 (lower is better) Translates to: HLVAGKQAQGSQ*FYFIVSCIIIS Trigger: TGAAATAATTATACAACTCACTATAAAATAGAATCACTGGGAGCCCTGAGCTTGTTTTCCTGCAACTAGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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| CDS GCA 72 bp | AAGAGTATACTTGATTGTAGGATAACCTGTTATCAGTaGTGGACCAATACATCCCATTACATCTGTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: KSILDCRITCYQ*WTNTSHYICSF Trigger: AAAAGAACAGATGTAATGGGATGTATTGGTCCAGCACTGATAACAGGTTATCCTACAATCAAGTATACTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637369.1 ENST00000663227.1 ENST00000668049.1 |
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| CDS GCA 72 bp | AAAGGGTTGAAAAAGTCTCCCTCAAATGAAAAATTCTaGGTGAAGCCTGAACATACAACCTTTCATAATTTA | + |
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Preference number: 6 (lower is better) Translates to: KGLKKSPSNEKF*VKPEHTTFHNL Trigger: TAAATTATGAAAGGTTGTATGTTCAGGCTTCACGCAGAATTTTTCATTTGAGGGAGACTTTTTCAACCCTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS GCA 72 bp | GAATATTTACTGTCTCATCTTCACTGCTTTAGAATGTaGCGTGCACATAATAAATACCCAATATTCCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: EYLLSHLHCFRM*RAHNKYPIFLV Trigger: TACAAGGAATATTGGGTATTTATTATGTGCACGGCACATTCTAAAGCAGTGAAGATGAGACAGTAAATATTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636467.2 ENST00000637369.1 |
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| CDS CAA 72 bp | TTGAATGAAGCTACACACAAGAAAATATCTGATTTCTaGGTAGGCACATGTGCATCATATAGTGGTGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: LNEATHKKISDF*VGTCASYSGEN Trigger: ATTTTCACCACTATATGATGCACATGTGCCTACCAAGAAATCAGATATTTTCTTGTGTGTAGCTTCATTCAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636983.1 |
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