Pregenerated sensors for LINC01901 (Homo sapiens)
Ensembl gene IDs: ENSG00000267413Ensembl transcript IDs: ENST00000585822.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCGCGTACAGCCGCCCTGATGGATCGCTGGGGCCTCGGGCGGGGTaGACCGCTGTCCTTTCGCCGCCGTCCGGGCGGCACTGCACGTGC | + |
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Preference number: 5 (lower is better) Translates to: PAYSRPDGSLGPRAG*TAVLSPPSGRHCTC Trigger: GCACGTGCAGTGCCGCCCGGACGGCGGCGAAAGGACAGCGGTGCACCCCGCCCGAGGCCCCAGCGATCCATCAGGGCGGCTGTACGCGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS GCA 90 bp | CAGCGCGCGGTCCCCCACCCAGCGCAGCCCGCAACACCCCTGGTCTaGCGCAGGAGACCCTGCCGATGCCACTCAGGGTCAAGACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: QRAVPHPAQPATPLV*RRRPCRCHSGSRLW Trigger: CCAGAGTCTTGACCCTGAGTGGCATCGGCAGGGTCTCCTGCGGCAGACCAGGGGTGTTGCGGGCTGCGCTGGGTGGGGGACCGCGCGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS TCA 90 bp | CCCCGAAGCCTCGCCAGCGGCGTCTGTCCGGCTTGCTCTTCTGTCTaGGCTGCGCTCCGGGGAGGCGCCTGGCTGTTTAGCCGCCGTATC | + |
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Preference number: 5 (lower is better) Translates to: PRSLASGVCPACSSV*AALRGGAWLFSRRI Trigger: GATACGGCGGCTAAACAGCCAGGCGCCTCCCCGGAGCGCAGCTCAGACAGAAGAGCAAGCCGGACAGACGCCGCTGGCGAGGCTTCGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS GCA 90 bp | CACCCAGCGCAGCCCGCAACACCCCTGGTCTGCCGCAGGAGACCCTaGCGATGCCACTCAGGGTCAAGACTCTGGCGCGGTGGAAACTTT | + |
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Preference number: 5 (lower is better) Translates to: HPAQPATPLVCRRRP*RCHSGSRLWRGGNF Trigger: AAAGTTTCCACCGCGCCAGAGTCTTGACCCTGAGTGGCATCGGCAGGGTCTCCTGCGGCAGACCAGGGGTGTTGCGGGCTGCGCTGGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS GCA 90 bp | GCGCAGCCCGCAACACCCCTGGTCTGCCGCAGGAGACCCTGCCGATaGCACTCAGGGTCAAGACTCTGGCGCGGTGGAAACTTTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: AQPATPLVCRRRPCR*HSGSRLWRGGNFSL Trigger: CAAAGAAAAGTTTCCACCGCGCCAGAGTCTTGACCCTGAGTGGCATCGGCAGGGTCTCCTGCGGCAGACCAGGGGTGTTGCGGGCTGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS TCA 90 bp | AGGGCTGCGCCAGCTTCAGAATCCTGCTGCCATCTAGGGATGAGATaGAGCGTCTTCCCGCGTACAGCCGCCCTGATGGATCGCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: RAAPASESCCHLGMR*SVFPRTAALMDRWG Trigger: GCCCCAGCGATCCATCAGGGCGGCTGTACGCGGGAAGACGCTTCATCTCATCCCTAGATGGCAGCAGGATTCTGAAGCTGGCGCAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS TCA 90 bp | ATCTGTGTGCAAAAAGAGAGAATGTGGTGTCCAAGCTGCAGGATCTaGCCCCCGAAGCCTCGCCAGCGGCGTCTGTCCGGCTTGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: ICVQKERMWCPSCRI*PPKPRQRRLSGLLF Trigger: GAAGAGCAAGCCGGACAGACGCCGCTGGCGAGGCTTCGGGGGTCAGATCCTGCAGCTTGGACACCACATTCTCTCTTTTTGCACACAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS TCA 90 bp | CCCCAAAGTGCACGGCAGGACGGTAGTGAAGCTGGAGCTAAAGTCTaGATCTTCACATCCTGCTCCCTTCCTGCATGGCCAGCCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: PQSARQDGSEAGAKV*IFTSCSLPAWPAWS Trigger: GGACCAGGCTGGCCATGCAGGAAGGGAGCAGGATGTGAAGATTCAGACTTTAGCTCCAGCTTCACTACCGTCCTGCCGTGCACTTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS GCA 90 bp | TGGCAATCTGTTCAGGAAAATAGACCAGAAAGGGCTGCCCAGGGCTaGGCCAGCTTCAGAATCCTGCTGCCATCTAGGGATGAGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: WQSVQENRPERAAQG*ASFRILLPSRDEMK Trigger: CTTCATCTCATCCCTAGATGGCAGCAGGATTCTGAAGCTGGCGCAGCCCTGGGCAGCCCTTTCTGGTCTATTTTCCTGAACAGATTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS GCA 90 bp | CTCAAGGTAAGTGGAGCGATGTGTGGCTGGGAGCTGGGGAACGGTTaGCAAAAGCCTTGCATCATTGCTTCACCTCAATGGAACTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LKVSGAMCGWELGNG*QKPCIIASPQWNFL Trigger: CAAGAAGTTCCATTGAGGTGAAGCAATGATGCAAGGCTTTTGGCAACCGTTCCCCAGCTCCCAGCCACACATCGCTCCACTTACCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS CCA 90 bp | TTTCTTTGGAGGCTGTCACTCAAGGTAAGTGGAGCGATGTGTGGCTaGGAGCTGGGGAACGGTTGCCAAAAGCCTTGCATCATTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: FLWRLSLKVSGAMCG*ELGNGCQKPCIIAS Trigger: TGAAGCAATGATGCAAGGCTTTTGGCAACCGTTCCCCAGCTCCCAGCCACACATCGCTCCACTTACCTTGAGTGACAGCCTCCAAAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS GCA 72 bp | TGCACCGCTGTCCTTTCGCCGCCGTCCGGGCGGCACTaGACGTGCAGCGCGCGGTCCCCCACCCAGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CTAVLSPPSGRH*TCSARSPTQRS Trigger: GCTGCGCTGGGTGGGGGACCGCGCGCTGCACGTGCAGTGCCGCCCGGACGGCGGCGAAAGGACAGCGGTGCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS GCA 72 bp | AGCCGCCCTGATGGATCGCTGGGGCCTCGGGCGGGGTaGACCGCTGTCCTTTCGCCGCCGTCCGGGCGGCAC | + |
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Preference number: 6 (lower is better) Translates to: SRPDGSLGPRAG*TAVLSPPSGRH Trigger: GTGCCGCCCGGACGGCGGCGAAAGGACAGCGGTGCACCCCGCCCGAGGCCCCAGCGATCCATCAGGGCGGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS GCA 72 bp | GTCCCCCACCCAGCGCAGCCCGCAACACCCCTGGTCTaGCGCAGGAGACCCTGCCGATGCCACTCAGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: VPHPAQPATPLV*RRRPCRCHSGS Trigger: TGACCCTGAGTGGCATCGGCAGGGTCTCCTGCGGCAGACCAGGGGTGTTGCGGGCTGCGCTGGGTGGGGGAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS CCA 72 bp | AGCGTCTTCCCGCGTACAGCCGCCCTGATGGATCGCTaGGGCCTCGGGCGGGGTGCACCGCTGTCCTTTCGC | + |
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Preference number: 6 (lower is better) Translates to: SVFPRTAALMDR*GLGRGAPLSFR Trigger: GCGAAAGGACAGCGGTGCACCCCGCCCGAGGCCCCAGCGATCCATCAGGGCGGCTGTACGCGGGAAGACGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS GCA 72 bp | CAGCCCGCAACACCCCTGGTCTGCCGCAGGAGACCCTaGCGATGCCACTCAGGGTCAAGACTCTGGCGCGGT | + |
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Preference number: 6 (lower is better) Translates to: QPATPLVCRRRP*RCHSGSRLWRG Trigger: ACCGCGCCAGAGTCTTGACCCTGAGTGGCATCGGCAGGGTCTCCTGCGGCAGACCAGGGGTGTTGCGGGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS GCA 72 bp | GCAACACCCCTGGTCTGCCGCAGGAGACCCTGCCGATaGCACTCAGGGTCAAGACTCTGGCGCGGTGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: ATPLVCRRRPCR*HSGSRLWRGGN Trigger: GTTTCCACCGCGCCAGAGTCTTGACCCTGAGTGGCATCGGCAGGGTCTCCTGCGGCAGACCAGGGGTGTTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS TCA 72 bp | CCAGCTTCAGAATCCTGCTGCCATCTAGGGATGAGATaGAGCGTCTTCCCGCGTACAGCCGCCCTGATGGAT | + |
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Preference number: 6 (lower is better) Translates to: PASESCCHLGMR*SVFPRTAALMD Trigger: ATCCATCAGGGCGGCTGTACGCGGGAAGACGCTTCATCTCATCCCTAGATGGCAGCAGGATTCTGAAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS CCA 72 bp | AGGCTGTCACTCAAGGTAAGTGGAGCGATGTGTGGCTaGGAGCTGGGGAACGGTTGCCAAAAGCCTTGCATC | + |
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Preference number: 6 (lower is better) Translates to: RLSLKVSGAMCG*ELGNGCQKPCI Trigger: GATGCAAGGCTTTTGGCAACCGTTCCCCAGCTCCCAGCCACACATCGCTCCACTTACCTTGAGTGACAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS CCA 72 bp | TTGGAGGCTGTCACTCAAGGTAAGTGGAGCGATGTGTaGCTGGGAGCTGGGGAACGGTTGCCAAAAGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LEAVTQGKWSDV*LGAGERLPKAL Trigger: CAAGGCTTTTGGCAACCGTTCCCCAGCTCCCAGCCACACATCGCTCCACTTACCTTGAGTGACAGCCTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS CCA 72 bp | AGGAGACCCTGCCGATGCCACTCAGGGTCAAGACTCTaGCGCGGTGGAAACTTTTCTTTGGAGGCTGTCACT | + |
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Preference number: 6 (lower is better) Translates to: RRPCRCHSGSRL*RGGNFSLEAVT Trigger: AGTGACAGCCTCCAAAGAAAAGTTTCCACCGCGCCAGAGTCTTGACCCTGAGTGGCATCGGCAGGGTCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS TCA 72 bp | GCACGGCAGGACGGTAGTGAAGCTGGAGCTAAAGTCTaGATCTTCACATCCTGCTCCCTTCCTGCATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: ARQDGSEAGAKV*IFTSCSLPAWP Trigger: TGGCCATGCAGGAAGGGAGCAGGATGTGAAGATTCAGACTTTAGCTCCAGCTTCACTACCGTCCTGCCGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS CCA 72 bp | GGAAACTTTTCTTTGGAGGCTGTCACTCAAGGTAAGTaGAGCGATGTGTGGCTGGGAGCTGGGGAACGGTTG | + |
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Preference number: 6 (lower is better) Translates to: GNFSLEAVTQGK*SDVWLGAGERL Trigger: CAACCGTTCCCCAGCTCCCAGCCACACATCGCTCCACTTACCTTGAGTGACAGCCTCCAAAGAAAAGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS GCA 72 bp | TGGCAGAGAAGACCAGTGTTTCTCCATGAGTTCATGTaGATCTGTGCGTGTGTCCTCTGTGCACTCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: WQRRPVFLHEFM*ICACVLCALRP Trigger: AGGCCTGAGTGCACAGAGGACACACGCACAGATGCACATGAACTCATGGAGAAACACTGGTCTTCTCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS CAA 90 bp | TGGAGCGATGTGTGGCTGGGAGCTGGGGAACGGTTGCCAAAAGCCTaGCATCATTGCTTCACCTCAATGGAACTTCTTGAACTGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: WSDVWLGAGERLPKA*HHCFTSMELLELSI Trigger: AATGCTCAGTTCAAGAAGTTCCATTGAGGTGAAGCAATGATGCAAGGCTTTTGGCAACCGTTCCCCAGCTCCCAGCCACACATCGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS GCA 72 bp | TGTGGCTGGGAGCTGGGGAACGGTTGCCAAAAGCCTTaGATCATTGCTTCACCTCAATGGAACTTCTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: CGWELGNGCQKP*IIASPQWNFLN Trigger: GTTCAAGAAGTTCCATTGAGGTGAAGCAATGATGCAAGGCTTTTGGCAACCGTTCCCCAGCTCCCAGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS CAA 72 bp | GTGTGGCTGGGAGCTGGGGAACGGTTGCCAAAAGCCTaGCATCATTGCTTCACCTCAATGGAACTTCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: VWLGAGERLPKA*HHCFTSMELLE Trigger: TTCAAGAAGTTCCATTGAGGTGAAGCAATGATGCAAGGCTTTTGGCAACCGTTCCCCAGCTCCCAGCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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| CDS GCA 72 bp | GGAGCTGGGGAACGGTTGCCAAAAGCCTTGCATCATTaGTTCACCTCAATGGAACTTCTTGAACTGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: GAGERLPKALHH*FTSMELLELSI Trigger: AATGCTCAGTTCAAGAAGTTCCATTGAGGTGAAGCAATGATGCAAGGCTTTTGGCAACCGTTCCCCAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585822.1 |
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