Pregenerated sensors for LINC01899 (Homo sapiens)

Ensembl gene IDs: ENSG00000265352

Ensembl transcript IDs: ENST00000580323.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AGGAGTCTCAGAAATGTAGTTTCCCAGCCTCCATTCCTTGTAATTTaGGGGAAGAACCACCATCTACTCTGGAAATGTCCAGGAGAGATT	+
Preference number: 5 (lower is better) Translates to: RSLRNVVSQPPFLVI*GKNHHLLWKCPGEI Trigger: AATCTCTCCTGGACATTTCCAGAGTAGATGGTGGTTCTTCCCCCAAATTACAAGGAATGGAGGCTGGGAAACTACATTTCTGAGACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580323.1
CDS CAA 90 bp	AAGGAGTCTCAGAAATGTAGTTTCCCAGCCTCCATTCCTTGTAATTaGGGGGAAGAACCACCATCTACTCTGGAAATGTCCAGGAGAGAT	+
Preference number: 6 (lower is better) Translates to: KESQKCSFPASIPCN*GEEPPSTLEMSRRD Trigger: ATCTCTCCTGGACATTTCCAGAGTAGATGGTGGTTCTTCCCCCAAATTACAAGGAATGGAGGCTGGGAAACTACATTTCTGAGACTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580323.1
CDS CAA 72 bp	CAGAAATGTAGTTTCCCAGCCTCCATTCCTTGTAATTaGGGGGAAGAACCACCATCTACTCTGGAAATGTCC	+
Preference number: 6 (lower is better) Translates to: QKCSFPASIPCN*GEEPPSTLEMS Trigger: GGACATTTCCAGAGTAGATGGTGGTTCTTCCCCCAAATTACAAGGAATGGAGGCTGGGAAACTACATTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580323.1
CDS CCA 72 bp	AGAAATGTAGTTTCCCAGCCTCCATTCCTTGTAATTTaGGGGAAGAACCACCATCTACTCTGGAAATGTCCA	+
Preference number: 6 (lower is better) Translates to: RNVVSQPPFLVI*GKNHHLLWKCP Trigger: TGGACATTTCCAGAGTAGATGGTGGTTCTTCCCCCAAATTACAAGGAATGGAGGCTGGGAAACTACATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580323.1
CDS CCA 72 bp	TTCCTTGTAATTTGGGGGAAGAACCACCATCTACTCTaGAAATGTCCAGGAGAGATTCTTTTCATCAAGGCT	+
Preference number: 6 (lower is better) Translates to: FLVIWGKNHHLL*KCPGEILFIKA Trigger: AGCCTTGATGAAAAGAATCTCTCCTGGACATTTCCAGAGTAGATGGTGGTTCTTCCCCCAAATTACAAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000580323.1
CDS CAA 72 bp	TGGAAATGTCCAGGAGAGATTCTTTTCATCAAGGCTTaGGGAGATATGTTGAGGAAGACAATGCTGATGTCC	+
Preference number: 6 (lower is better) Translates to: WKCPGEILFIKA*GDMLRKTMLMS Trigger: GGACATCAGCATTGTCTTCCTCAACATATCTCCCAAAGCCTTGATGAAAAGAATCTCTCCTGGACATTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580323.1
CDS CAA 72 bp	AACGTGAATAAAAAGCATAGTGTAAGAAACTGCTTCTaGAAAACAGGAAAGCCTTTGCACATTCGTCTGTCA	+
Preference number: 6 (lower is better) Translates to: NVNKKHSVRNCF*KTGKPLHIRLS Trigger: TGACAGACGAATGTGCAAAGGCTTTCCTGTTTTCAAGAAGCAGTTTCTTACACTATGCTTTTTATTCACGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000580323.1

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