Pregenerated sensors for LINC01896 (Homo sapiens)
Ensembl gene IDs: ENSG00000262280, ENSG00000263146Ensembl transcript IDs: ENST00000570964.1, ENST00000572007.1, ENST00000573860.1, ENST00000575722.1, ENST00000576208.1, ENST00000576780.1, ENST00000583511.1, ENST00000631836.1, ENST00000632155.1, ENST00000632926.1, ENST00000633256.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGCGGAAGAACGCGGGCTGGGAAGCAAGCGGGAAGATTCTAGAATaGAAGGGAGCCCGCCGAGCGCCGCGAGCCGCGCCAGGCCGGGTC | + |
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Preference number: 5 (lower is better) Translates to: RRKNAGWEASGKILE*KGARRAPRAAPGRV Trigger: GACCCGGCCTGGCGCGGCTCGCGGCGCTCGGCGGGCTCCCTTCCATTCTAGAATCTTCCCGCTTGCTTCCCAGCCCGCGTTCTTCCGCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000570964.1 ENST00000573860.1 ENST00000575722.1 ENST00000576208.1 ENST00000632155.1 ENST00000632926.1 |
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| CDS CCA 90 bp | CCAGTGAGGAGTTGGTGCCGCCGGGCCAGAGGCTGCGAGTCCAGCTaGCTCTGGACTTGCTCCGCAGGCGTCAGACGCCGTGGGAACCTG | + |
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Preference number: 5 (lower is better) Translates to: PVRSWCRRARGCESS*LWTCSAGVRRRGNL Trigger: CAGGTTCCCACGGCGTCTGACGCCTGCGGAGCAAGTCCAGAGCCAGCTGGACTCGCAGCCTCTGGCCCGGCGGCACCAACTCCTCACTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS GCA 90 bp | CACCCTGCCTTCACGCCCGGTTCACTTGCGTCCACGAAAGCAGCGTaGCGGCCTCCTCCATCTTCCCACTCGCGCAACGCACGGCGACCC | + |
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Preference number: 5 (lower is better) Translates to: HPAFTPGSLASTKAA*RPPPSSHSRNARRP Trigger: GGGTCGCCGTGCGTTGCGCGAGTGGGAAGATGGAGGAGGCCGGCACGCTGCTTTCGTGGACGCAAGTGAACCGGGCGTGAAGGCAGGGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000583511.1 ENST00000632155.1 ENST00000633256.1 |
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| CDS CCA 90 bp | AGGAGTTGGTGCCGCCGGGCCAGAGGCTGCGAGTCCAGCTGGCTCTaGACTTGCTCCGCAGGCGTCAGACGCCGTGGGAACCTGTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: RSWCRRARGCESSWL*TCSAGVRRRGNLCL Trigger: CAGACACAGGTTCCCACGGCGTCTGACGCCTGCGGAGCAAGTCCAGAGCCAGCTGGACTCGCAGCCTCTGGCCCGGCGGCACCAACTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS GCA 90 bp | TGGTGCCGCCGGGCCAGAGGCTGCGAGTCCAGCTGGCTCTGGACTTaGTCCGCAGGCGTCAGACGCCGTGGGAACCTGTGTCTGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: WCRRARGCESSWLWT*SAGVRRRGNLCLLL Trigger: AAGAAGCAGACACAGGTTCCCACGGCGTCTGACGCCTGCGGAGCAAGTCCAGAGCCAGCTGGACTCGCAGCCTCTGGCCCGGCGGCACCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS GCA 90 bp | GCTCAAAATGACCCAGTGAGGAGTTGGTGCCGCCGGGCCAGAGGCTaGGAGTCCAGCTGGCTCTGGACTTGCTCCGCAGGCGTCAGACGC | + |
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Preference number: 5 (lower is better) Translates to: AQNDPVRSWCRRARG*ESSWLWTCSAGVRR Trigger: GCGTCTGACGCCTGCGGAGCAAGTCCAGAGCCAGCTGGACTCGCAGCCTCTGGCCCGGCGGCACCAACTCCTCACTGGGTCATTTTGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS GCA 90 bp | TTTCCGCTGCACACACAGCCTCCCGGGCCCTCTCCTCCAAGGCTCTaGCGGATCTTCCAACGAAATCCCAGAGCAGCCTGCGCTGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: FPLHTQPPGPSPPRL*RIFQRNPRAACAGE Trigger: CTCCCCAGCGCAGGCTGCTCTGGGATTTCGTTGGAAGATCCGGCAGAGCCTTGGAGGAGAGGGCCCGGGAGGCTGTGTGTGCAGCGGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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| CDS CCA 90 bp | AAGGCTCTGCCGGATCTTCCAACGAAATCCCAGAGCAGCCTGCGCTaGGGAGCCCGCAAGTCTCTCCAGATCTCTGCACCCCGCACCGCC | + |
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Preference number: 5 (lower is better) Translates to: KALPDLPTKSQSSLR*GARKSLQISAPRTA Trigger: GGCGGTGCGGGGTGCAGAGATCTGGAGAGACTTGCGGGCTCCCCAGCGCAGGCTGCTCTGGGATTTCGTTGGAAGATCCGGCAGAGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000583511.1 ENST00000632155.1 ENST00000633256.1 |
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| CDS TCA 90 bp | ACACGCAACAGAAAAGGTGGGCACAGCGCGCTCAAAATGACCCAGTaGGGAGTTGGTGCCGCCGGGCCAGAGGCTGCGAGTCCAGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: TRNRKGGHSALKMTQ*GVGAAGPEAASPAG Trigger: GCCAGCTGGACTCGCAGCCTCTGGCCCGGCGGCACCAACTCCTCACTGGGTCATTTTGAGCGCGCTGTGCCCACCTTTTCTGTTGCGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS TCA 90 bp | CCACGTCCACACGCAACAGAAAAGGTGGGCACAGCGCGCTCAAAATaGCCCAGTGAGGAGTTGGTGCCGCCGGGCCAGAGGCTGCGAGTC | + |
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Preference number: 5 (lower is better) Translates to: PRPHATEKVGTARSK*PSEELVPPGQRLRV Trigger: GACTCGCAGCCTCTGGCCCGGCGGCACCAACTCCTCACTGGGTCATTTTGAGCGCGCTGTGCCCACCTTTTCTGTTGCGTGTGGACGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS GCA 90 bp | AAAAGGTGGGCACAGCGCGCTCAAAATGACCCAGTGAGGAGTTGGTaGCGCCGGGCCAGAGGCTGCGAGTCCAGCTGGCTCTGGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: KRWAQRAQNDPVRSW*RRARGCESSWLWTC Trigger: GCAAGTCCAGAGCCAGCTGGACTCGCAGCCTCTGGCCCGGCGGCACCAACTCCTCACTGGGTCATTTTGAGCGCGCTGTGCCCACCTTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS CCA 90 bp | TCCCCACGTCCACACACAATTAAAGGCAGGCGGAAGAACGCGGGCTaGGAAGCAAGCGGGAAGATTCTAGAATGGAAGGGAGCCCGCCGA | + |
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Preference number: 5 (lower is better) Translates to: SPRPHTIKGRRKNAG*EASGKILEWKGARR Trigger: TCGGCGGGCTCCCTTCCATTCTAGAATCTTCCCGCTTGCTTCCCAGCCCGCGTTCTTCCGCCTGCCTTTAATTGTGTGTGGACGTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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| CDS CCA 90 bp | GACGAGTATGTGTGTGCCCCTCCGAGTCTGCACTACACAGGCACATaGCCCAGCGTCGCTTTAATCTGGGCACGACTAGAGCGCATGTCC | + |
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Preference number: 5 (lower is better) Translates to: DEYVCAPPSLHYTGT*PSVALIWARLERMS Trigger: GGACATGCGCTCTAGTCGTGCCCAGATTAAAGCGACGCTGGGCCATGTGCCTGTGTAGTGCAGACTCGGAGGGGCACACACATACTCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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| CDS CCA 90 bp | AAAAGGGTGCACCGCAGAAATTACTCGTGCGCACCATTTCCGCTGTaGGGGCATTCGTACAAGTTTCCGCTGCACACACAGCCTCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: KRVHRRNYSCAPFPL*GHSYKFPLHTQPPG Trigger: CCCGGGAGGCTGTGTGTGCAGCGGAAACTTGTACGAATGCCCCCACAGCGGAAATGGTGCGCACGAGTAATTTCTGCGGTGCACCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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| CDS GCA 90 bp | CCATCTTCCCACTCGCGCAACGCACGGCGACCCGCGCGACACTTCTaGAATCTGAAGGCTTGCTTCTTACAAATAAAGGGCCAGAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: PSSHSRNARRPARHF*NLKACFLQIKGQSL Trigger: GAGACTCTGGCCCTTTATTTGTAAGAAGCAAGCCTTCAGATTGCAGAAGTGTCGCGCGGGTCGCCGTGCGTTGCGCGAGTGGGAAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000570964.1 ENST00000572007.1 ENST00000575722.1 ENST00000576780.1 ENST00000583511.1 ENST00000631836.1 ENST00000632155.1 ENST00000633256.1 |
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| CDS GCA 90 bp | CGCAACGCACGGCGACCCGCGCGACACTTCTGCAATCTGAAGGCTTaGTTCTTACAAATAAAGGGCCAGAGTCTCACACTTGCCTTCGTT | + |
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Preference number: 5 (lower is better) Translates to: RNARRPARHFCNLKA*FLQIKGQSLTLAFV Trigger: AACGAAGGCAAGTGTGAGACTCTGGCCCTTTATTTGTAAGAAGCAAGCCTTCAGATTGCAGAAGTGTCGCGCGGGTCGCCGTGCGTTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000570964.1 ENST00000572007.1 ENST00000575722.1 ENST00000576780.1 ENST00000583511.1 ENST00000631836.1 ENST00000632155.1 ENST00000633256.1 |
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| CDS CCA 90 bp | CTTCGTCAAACTTACACAATTAAAGGCAGGCGGAAGAACGCGGGCTaGGAAGCAAGCGGGAAGATTCTAGAATGGAAGGGAGCCCGCCGA | + |
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Preference number: 5 (lower is better) Translates to: LRQTYTIKGRRKNAG*EASGKILEWKGARR Trigger: TCGGCGGGCTCCCTTCCATTCTAGAATCTTCCCGCTTGCTTCCCAGCCCGCGTTCTTCCGCCTGCCTTTAATTGTGTAAGTTTGACGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000573860.1 ENST00000576208.1 ENST00000632926.1 |
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| CDS CCA 90 bp | TTGCTTCTTACAAATAAAGGGCCAGAGTCTCACACTTGCCTTCGTTaGAGGGACTTAGAAGATCCTCCCCACGTCCACACTGGGGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: LLLTNKGPESHTCLR*RDLEDPPHVHTGAR Trigger: CCTCGCCCCAGTGTGGACGTGGGGAGGATCTTCTAAGTCCCTCCAACGAAGGCAAGTGTGAGACTCTGGCCCTTTATTTGTAAGAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000583511.1 ENST00000633256.1 |
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| CDS TCA 90 bp | CCTTCCTCTATGACCCTCCTGCGCTTTTCCTGGAACCCAAAGCTCTaGCTTCGTCAAACTTACACAATTAAAGGCAGGCGGAAGAACGCG | + |
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Preference number: 5 (lower is better) Translates to: PSSMTLLRFSWNPKL*LRQTYTIKGRRKNA Trigger: CGCGTTCTTCCGCCTGCCTTTAATTGTGTAAGTTTGACGAAGTCAGAGCTTTGGGTTCCAGGAAAAGCGCAGGAGGGTCATAGAGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000573860.1 ENST00000576208.1 ENST00000632926.1 |
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| CDS GCA 90 bp | TCTGAAGGCTTGCTTCTTACAAATAAAGGGCCAGAGTCTCACACTTaGCTTCGTTGGAGGGACTTAGAAGATCCTCCCCACGTCCACACG | + |
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Preference number: 5 (lower is better) Translates to: SEGLLLTNKGPESHT*LRWRDLEDPPHVHT Trigger: CGTGTGGACGTGGGGAGGATCTTCTAAGTCCCTCCAACGAAGGCAAGTGTGAGACTCTGGCCCTTTATTTGTAAGAAGCAAGCCTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS GCA 90 bp | TCTGAAGGCTTGCTTCTTACAAATAAAGGGCCAGAGTCTCACACTTaGCTTCGTTGGAGGGACTTAGAAGATCCTCCCCACGTCCACACA | + |
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Preference number: 5 (lower is better) Translates to: SEGLLLTNKGPESHT*LRWRDLEDPPHVHT Trigger: TGTGTGGACGTGGGGAGGATCTTCTAAGTCCCTCCAACGAAGGCAAGTGTGAGACTCTGGCCCTTTATTTGTAAGAAGCAAGCCTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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| CDS GCA 90 bp | TCTGAAGGCTTGCTTCTTACAAATAAAGGGCCAGAGTCTCACACTTaGCTTCGTTGGAGGGACTTAGAAGATCCTCCCCACGTCCACACT | + |
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Preference number: 5 (lower is better) Translates to: SEGLLLTNKGPESHT*LRWRDLEDPPHVHT Trigger: AGTGTGGACGTGGGGAGGATCTTCTAAGTCCCTCCAACGAAGGCAAGTGTGAGACTCTGGCCCTTTATTTGTAAGAAGCAAGCCTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000583511.1 ENST00000633256.1 |
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| CDS CCA 90 bp | TTGCTTCTTACAAATAAAGGGCCAGAGTCTCACACTTGCCTTCGTTaGAGGGACTTAGAAGATCCTCCCCACGTCCACACGCAACAGAAA | + |
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Preference number: 5 (lower is better) Translates to: LLLTNKGPESHTCLR*RDLEDPPHVHTQQK Trigger: TTTCTGTTGCGTGTGGACGTGGGGAGGATCTTCTAAGTCCCTCCAACGAAGGCAAGTGTGAGACTCTGGCCCTTTATTTGTAAGAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS CCA 90 bp | TTGCTTCTTACAAATAAAGGGCCAGAGTCTCACACTTGCCTTCGTTaGAGGGACTTAGAAGATCCTCCCCACGTCCACACACAATTAAAG | + |
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Preference number: 5 (lower is better) Translates to: LLLTNKGPESHTCLR*RDLEDPPHVHTQLK Trigger: CTTTAATTGTGTGTGGACGTGGGGAGGATCTTCTAAGTCCCTCCAACGAAGGCAAGTGTGAGACTCTGGCCCTTTATTTGTAAGAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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| CDS CCA 72 bp | CTCTCCAGATCTCTGCACCCCGCACCGCCCGGAATCTaGGACGGCGCCCACGCAGGGCTGGGCCAAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LSRSLHPAPPGI*DGAHAGLGQGQ Trigger: CTGCCCTTGGCCCAGCCCTGCGTGGGCGCCGTCCCAGATTCCGGGCGGTGCGGGGTGCAGAGATCTGGAGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000583511.1 ENST00000632155.1 ENST00000633256.1 |
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| CDS CCA 72 bp | TGCCGCCGGGCCAGAGGCTGCGAGTCCAGCTGGCTCTaGACTTGCTCCGCAGGCGTCAGACGCCGTGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: CRRARGCESSWL*TCSAGVRRRGN Trigger: GTTCCCACGGCGTCTGACGCCTGCGGAGCAAGTCCAGAGCCAGCTGGACTCGCAGCCTCTGGCCCGGCGGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS CCA 72 bp | AACGCGGGCTGGGAAGCAAGCGGGAAGATTCTAGAATaGAAGGGAGCCCGCCGAGCGCCGCGAGCCGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: NAGWEASGKILE*KGARRAPRAAP Trigger: TGGCGCGGCTCGCGGCGCTCGGCGGGCTCCCTTCCATTCTAGAATCTTCCCGCTTGCTTCCCAGCCCGCGTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000570964.1 ENST00000573860.1 ENST00000575722.1 ENST00000576208.1 ENST00000632155.1 ENST00000632926.1 |
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| CDS GCA 72 bp | GCAGAGCTCGCACCCTGCCTTCACGCCCGGTTCACTTaGGTCCACGAAAGCAGCGTGCCGGCCTCCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: AELAPCLHARFT*VHESSVPASSI Trigger: GATGGAGGAGGCCGGCACGCTGCTTTCGTGGACGCAAGTGAACCGGGCGTGAAGGCAGGGTGCGAGCTCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000583511.1 ENST00000632155.1 ENST00000633256.1 |
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| CDS GCA 72 bp | GCACAGCGCGCTCAAAATGACCCAGTGAGGAGTTGGTaGCGCCGGGCCAGAGGCTGCGAGTCCAGCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: AQRAQNDPVRSW*RRARGCESSWL Trigger: GAGCCAGCTGGACTCGCAGCCTCTGGCCCGGCGGCACCAACTCCTCACTGGGTCATTTTGAGCGCGCTGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS CAA 72 bp | GGCAGAGCTCGCACCCTGCCTTCACGCCCGGTTCACTaGCGTCCACGAAAGCAGCGTGCCGGCCTCCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GRARTLPSRPVH*RPRKQRAGLLH Trigger: ATGGAGGAGGCCGGCACGCTGCTTTCGTGGACGCAAGTGAACCGGGCGTGAAGGCAGGGTGCGAGCTCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000583511.1 ENST00000632155.1 ENST00000633256.1 |
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| CDS TCA 72 bp | GAACGACTCGGGGAAGCTCCAGGAGGCCATCTGTGCTaGCGGTTCACACCAGACAGGACCACTGGCCCCCGT | + |
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Preference number: 6 (lower is better) Translates to: ERLGEAPGGHLC*RFTPDRTTGPR Trigger: ACGGGGGCCAGTGGTCCTGTCTGGTGTGAACCGTCAGCACAGATGGCCTCCTGGAGCTTCCCCGAGTCGTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000573860.1 ENST00000576208.1 ENST00000632926.1 |
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| CDS GCA 72 bp | TTCACGCCCGGTTCACTTGCGTCCACGAAAGCAGCGTaGCGGCCTCCTCCATCTTCCCACTCGCGCAACGCA | + |
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Preference number: 6 (lower is better) Translates to: FTPGSLASTKAA*RPPPSSHSRNA Trigger: TGCGTTGCGCGAGTGGGAAGATGGAGGAGGCCGGCACGCTGCTTTCGTGGACGCAAGTGAACCGGGCGTGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000583511.1 ENST00000632155.1 ENST00000633256.1 |
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| CDS GCA 72 bp | CACACACAGCCTCCCGGGCCCTCTCCTCCAAGGCTCTaGCGGATCTTCCAACGAAATCCCAGAGCAGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: HTQPPGPSPPRL*RIFQRNPRAAC Trigger: GCAGGCTGCTCTGGGATTTCGTTGGAAGATCCGGCAGAGCCTTGGAGGAGAGGGCCCGGGAGGCTGTGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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| CDS TCA 72 bp | AGAAAAGGTGGGCACAGCGCGCTCAAAATGACCCAGTaGGGAGTTGGTGCCGCCGGGCCAGAGGCTGCGAGT | + |
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Preference number: 6 (lower is better) Translates to: RKGGHSALKMTQ*GVGAAGPEAAS Trigger: ACTCGCAGCCTCTGGCCCGGCGGCACCAACTCCTCACTGGGTCATTTTGAGCGCGCTGTGCCCACCTTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS TCA 72 bp | CACGCAACAGAAAAGGTGGGCACAGCGCGCTCAAAATaGCCCAGTGAGGAGTTGGTGCCGCCGGGCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: HATEKVGTARSK*PSEELVPPGQR Trigger: CCTCTGGCCCGGCGGCACCAACTCCTCACTGGGTCATTTTGAGCGCGCTGTGCCCACCTTTTCTGTTGCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS GCA 72 bp | CATTTCCGCTGTGGGGGCATTCGTACAAGTTTCCGCTaGACACACAGCCTCCCGGGCCCTCTCCTCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: HFRCGGIRTSFR*THSLPGPLLQG Trigger: GCCTTGGAGGAGAGGGCCCGGGAGGCTGTGTGTGCAGCGGAAACTTGTACGAATGCCCCCACAGCGGAAATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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| CDS CCA 72 bp | CCGGATCTTCCAACGAAATCCCAGAGCAGCCTGCGCTaGGGAGCCCGCAAGTCTCTCCAGATCTCTGCACCC | + |
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Preference number: 6 (lower is better) Translates to: PDLPTKSQSSLR*GARKSLQISAP Trigger: GGGTGCAGAGATCTGGAGAGACTTGCGGGCTCCCCAGCGCAGGCTGCTCTGGGATTTCGTTGGAAGATCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000583511.1 ENST00000632155.1 ENST00000633256.1 |
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| CDS TCA 72 bp | GAACGACTCGGGGAAGCTCCAGGAGGCCATCTGTGCTaGCGGTTCACACCAGACAGGACCACTTGCAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: ERLGEAPGGHLC*RFTPDRTTCKD Trigger: GTCCTTGCAAGTGGTCCTGTCTGGTGTGAACCGTCAGCACAGATGGCCTCCTGGAGCTTCCCCGAGTCGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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| CDS CCA 72 bp | GTGTGTGCCCCTCCGAGTCTGCACTACACAGGCACATaGCCCAGCGTCGCTTTAATCTGGGCACGACTAGAG | + |
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Preference number: 6 (lower is better) Translates to: VCAPPSLHYTGT*PSVALIWARLE Trigger: CTCTAGTCGTGCCCAGATTAAAGCGACGCTGGGCCATGTGCCTGTGTAGTGCAGACTCGGAGGGGCACACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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| CDS GCA 72 bp | CACTCGCGCAACGCACGGCGACCCGCGCGACACTTCTaGAATCTGAAGGCTTGCTTCTTACAAATAAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: HSRNARRPARHF*NLKACFLQIKG Trigger: GCCCTTTATTTGTAAGAAGCAAGCCTTCAGATTGCAGAAGTGTCGCGCGGGTCGCCGTGCGTTGCGCGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000570964.1 ENST00000572007.1 ENST00000575722.1 ENST00000576780.1 ENST00000583511.1 ENST00000631836.1 ENST00000632155.1 ENST00000633256.1 |
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| CDS CCA 72 bp | CACTACACAGGCACATGGCCCAGCGTCGCTTTAATCTaGGCACGACTAGAGCGCATGTCCTGTCTCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: HYTGTWPSVALI*ARLERMSCLIC Trigger: GCAGATGAGACAGGACATGCGCTCTAGTCGTGCCCAGATTAAAGCGACGCTGGGCCATGTGCCTGTGTAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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| CDS CAA 90 bp | GCGCAACGCACGGCGACCCGCGCGACACTTCTGCAATCTGAAGGCTaGCTTCTTACAAATAAAGGGCCAGAGTCTCACACTTGCCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: AQRTATRATLLQSEG*LLTNKGPESHTCLR Trigger: ACGAAGGCAAGTGTGAGACTCTGGCCCTTTATTTGTAAGAAGCAAGCCTTCAGATTGCAGAAGTGTCGCGCGGGTCGCCGTGCGTTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000570964.1 ENST00000572007.1 ENST00000575722.1 ENST00000576780.1 ENST00000583511.1 ENST00000631836.1 ENST00000632155.1 ENST00000633256.1 |
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| CDS CCA 72 bp | CACCGCAGAAATTACTCGTGCGCACCATTTCCGCTGTaGGGGCATTCGTACAAGTTTCCGCTGCACACACAG | + |
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Preference number: 6 (lower is better) Translates to: HRRNYSCAPFPL*GHSYKFPLHTQ Trigger: CTGTGTGTGCAGCGGAAACTTGTACGAATGCCCCCACAGCGGAAATGGTGCGCACGAGTAATTTCTGCGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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| CDS GCA 72 bp | CCTTCGACCAGGGCTCTGGCCCTCCAGCGATCGTTTTaGGTTGTTTCTCTTCTCAAAAGTAGTCTCAGACCC | + |
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Preference number: 6 (lower is better) Translates to: PSTRALALQRSF*VVSLLKSSLRP Trigger: GGGTCTGAGACTACTTTTGAGAAGAGAAACAACGCAAAACGATCGCTGGAGGGCCAGAGCCCTGGTCGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS CCA 72 bp | CCACACACAATTAAAGGCAGGCGGAAGAACGCGGGCTaGGAAGCAAGCGGGAAGATTCTAGAATGGAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: PHTIKGRRKNAG*EASGKILEWKG Trigger: TCCCTTCCATTCTAGAATCTTCCCGCTTGCTTCCCAGCCCGCGTTCTTCCGCCTGCCTTTAATTGTGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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| CDS CCA 72 bp | ACAAATAAAGGGCCAGAGTCTCACACTTGCCTTCGTTaGAGGGACTTAGAAGATCCTCCCCACGTCCACACG | + |
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Preference number: 6 (lower is better) Translates to: TNKGPESHTCLR*RDLEDPPHVHT Trigger: CGTGTGGACGTGGGGAGGATCTTCTAAGTCCCTCCAACGAAGGCAAGTGTGAGACTCTGGCCCTTTATTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572007.1 ENST00000576780.1 ENST00000631836.1 |
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| CDS CAA 72 bp | ACGGCGACCCGCGCGACACTTCTGCAATCTGAAGGCTaGCTTCTTACAAATAAAGGGCCAGAGTCTCACACT | + |
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Preference number: 6 (lower is better) Translates to: TATRATLLQSEG*LLTNKGPESHT Trigger: AGTGTGAGACTCTGGCCCTTTATTTGTAAGAAGCAAGCCTTCAGATTGCAGAAGTGTCGCGCGGGTCGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000570964.1 ENST00000572007.1 ENST00000575722.1 ENST00000576780.1 ENST00000583511.1 ENST00000631836.1 ENST00000632155.1 ENST00000633256.1 |
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| CDS CCA 72 bp | ACTTACACAATTAAAGGCAGGCGGAAGAACGCGGGCTaGGAAGCAAGCGGGAAGATTCTAGAATGGAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: TYTIKGRRKNAG*EASGKILEWKG Trigger: TCCCTTCCATTCTAGAATCTTCCCGCTTGCTTCCCAGCCCGCGTTCTTCCGCCTGCCTTTAATTGTGTAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000573860.1 ENST00000576208.1 ENST00000632926.1 |
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| CDS CCA 72 bp | ACAAATAAAGGGCCAGAGTCTCACACTTGCCTTCGTTaGAGGGACTTAGAAGATCCTCCCCACGTCCACACT | + |
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Preference number: 6 (lower is better) Translates to: TNKGPESHTCLR*RDLEDPPHVHT Trigger: AGTGTGGACGTGGGGAGGATCTTCTAAGTCCCTCCAACGAAGGCAAGTGTGAGACTCTGGCCCTTTATTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000583511.1 ENST00000633256.1 |
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| CDS GCA 72 bp | TTGCTTCTTACAAATAAAGGGCCAGAGTCTCACACTTaGCTTCGTTGGAGGGACTTAGAAGATCCTCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: LLLTNKGPESHT*LRWRDLEDPPH Trigger: GTGGGGAGGATCTTCTAAGTCCCTCCAACGAAGGCAAGTGTGAGACTCTGGCCCTTTATTTGTAAGAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000570964.1 ENST00000572007.1 ENST00000575722.1 ENST00000576780.1 ENST00000583511.1 ENST00000631836.1 ENST00000632155.1 ENST00000633256.1 |
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| CDS CAA 72 bp | GTCCTGTCTCATCTGCGAAAATATTCCATAGACACGTaGTCACTTCGCAATAAATCTATGGTTGCAACTCAG | + |
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Preference number: 6 (lower is better) Translates to: VLSHLRKYSIDT*SLRNKSMVATQ Trigger: CTGAGTTGCAACCATAGATTTATTGCGAAGTGACAACGTGTCTATGGAATATTTTCGCAGATGAGACAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570964.1 ENST00000575722.1 ENST00000632155.1 |
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