Pregenerated sensors for LINC01895 (Homo sapiens)
Ensembl gene IDs: ENSG00000259256Ensembl transcript IDs: ENST00000558690.2, ENST00000653644.1, ENST00000662880.1, ENST00000664193.1, ENST00000664706.1, ENST00000665521.1, ENST00000665752.1, ENST00000667064.1, ENST00000667334.1, ENST00000667379.1, ENST00000669368.1, ENST00000669439.1, ENST00000669526.1, ENST00000671295.1, ENST00000671376.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GACCCGCAGGTAATAGGTGGCAGTGTGGCCACACACCAGAGCCCTTaGCTGGATTACCATTCTGGGTGTGGAGCCGGGAGTATTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: DPQVIGGSVATHQSP*LDYHSGCGAGSIPG Trigger: TCCAGGAATACTCCCGGCTCCACACCCAGAATGGTAATCCAGGCAAGGGCTCTGGTGTGTGGCCACACTGCCACCTATTACCTGCGGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000662880.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS CCA 90 bp | TGGCAGTGTGGCCACACACCAGAGCCCTTGCCTGGATTACCATTCTaGGTGTGGAGCCGGGAGTATTCCTGGAGGCTGAAGGAAAGGATC | + |
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Preference number: 5 (lower is better) Translates to: WQCGHTPEPLPGLPF*VWSREYSWRLKERI Trigger: GATCCTTTCCTTCAGCCTCCAGGAATACTCCCGGCTCCACACCCAGAATGGTAATCCAGGCAAGGGCTCTGGTGTGTGGCCACACTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000662880.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS GCA 90 bp | CCGGGAGTATTCCTGGAGGCTGAAGGAAAGGATCCAGACTCAGTCTaGGGAAAGGCTCTGAGTCCTGGCTGCTCCAACATGACCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: PGVFLEAEGKDPDSV*GKALSPGCSNMTLL Trigger: GAGAAGGGTCATGTTGGAGCAGCCAGGACTCAGAGCCTTTCCGCAGACTGAGTCTGGATCCTTTCCTTCAGCCTCCAGGAATACTCCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000662880.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS CCA 90 bp | CCCTTGCCTGGATTACCATTCTGGGTGTGGAGCCGGGAGTATTCCTaGAGGCTGAAGGAAAGGATCCAGACTCAGTCTGCGGAAAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: PLPGLPFWVWSREYS*RLKERIQTQSAERL Trigger: GAGCCTTTCCGCAGACTGAGTCTGGATCCTTTCCTTCAGCCTCCAGGAATACTCCCGGCTCCACACCCAGAATGGTAATCCAGGCAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000662880.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS TCA 90 bp | CTGGATTACCATTCTGGGTGTGGAGCCGGGAGTATTCCTGGAGGCTaGAGGAAAGGATCCAGACTCAGTCTGCGGAAAGGCTCTGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: LDYHSGCGAGSIPGG*RKGSRLSLRKGSES Trigger: GGACTCAGAGCCTTTCCGCAGACTGAGTCTGGATCCTTTCCTTCAGCCTCCAGGAATACTCCCGGCTCCACACCCAGAATGGTAATCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000662880.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS GCA 90 bp | GGAAAGGATCCAGACTCAGTCTGCGGAAAGGCTCTGAGTCCTGGCTaGTCCAACATGACCCTTCTCTCCTGCTCACATATTCCCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: GKDPDSVCGKALSPG*SNMTLLSCSHIPIS Trigger: GGAGATGGGAATATGTGAGCAGGAGAGAAGGGTCATGTTGGAGCAGCCAGGACTCAGAGCCTTTCCGCAGACTGAGTCTGGATCCTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667334.1 ENST00000667379.1 |
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| CDS GCA 90 bp | GGAAAGGATCCAGACTCAGTCTGCGGAAAGGCTCTGAGTCCTGGCTaGTCCAACATGACCCTTCTCTCCTGCTCACATATTCCAATCCCT | + |
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Preference number: 5 (lower is better) Translates to: GKDPDSVCGKALSPG*SNMTLLSCSHIPIP Trigger: AGGGATTGGAATATGTGAGCAGGAGAGAAGGGTCATGTTGGAGCAGCCAGGACTCAGAGCCTTTCCGCAGACTGAGTCTGGATCCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 |
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| CDS GCA 90 bp | GGAAAGGATCCAGACTCAGTCTGCGGAAAGGCTCTGAGTCCTGGCTaGTCCAACATGACCCTTCTCTCCTGCTCACATATTCCTGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: GKDPDSVCGKALSPG*SNMTLLSCSHIPEG Trigger: TCCTTCAGGAATATGTGAGCAGGAGAGAAGGGTCATGTTGGAGCAGCCAGGACTCAGAGCCTTTCCGCAGACTGAGTCTGGATCCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662880.1 |
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| CDS GCA 90 bp | GGAAAGGATCCAGACTCAGTCTGCGGAAAGGCTCTGAGTCCTGGCTaGTCCAACATGACCCTTCTCTCCTGCTCACATATTCCTTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GKDPDSVCGKALSPG*SNMTLLSCSHIPFL Trigger: CAGGAAAGGAATATGTGAGCAGGAGAGAAGGGTCATGTTGGAGCAGCCAGGACTCAGAGCCTTTCCGCAGACTGAGTCTGGATCCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667064.1 ENST00000671376.1 |
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| CDS GCA 90 bp | GGAAAGGCTCTGAGTCCTGGCTGCTCCAACATGACCCTTCTCTCCTaGTCACATATTCCCATCTCCGGTCTTTTGCTGTCTCTCCATTCC | + |
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Preference number: 5 (lower is better) Translates to: GKALSPGCSNMTLLS*SHIPISGLLLSLHS Trigger: GGAATGGAGAGACAGCAAAAGACCGGAGATGGGAATATGTGAGCAGGAGAGAAGGGTCATGTTGGAGCAGCCAGGACTCAGAGCCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667334.1 ENST00000667379.1 |
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| CDS TCA 90 bp | CAAGCATCCCTTCCTTTGAAAGGTTTCTCTCTTTACTCAGTGCGATaGTTCTGGGGGTGCCTCGATCGCAGCACCAGACGCTTCCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: QASLPLKGFSLYSVR*FWGCLDRSTRRFPV Trigger: AACTGGGAAGCGTCTGGTGCTGCGATCGAGGCACCCCCAGAATCATCGCACTGAGTAAAGAGAGAAACCTTTCAAAGGAAGGGATGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664706.1 |
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| CDS GCA 90 bp | GGAAAGGCTCTGAGTCCTGGCTGCTCCAACATGACCCTTCTCTCCTaGTCACATATTCCTTTCCTGTTGTGTTGGAAAATCTGGAACTCA | + |
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Preference number: 5 (lower is better) Translates to: GKALSPGCSNMTLLS*SHIPFLLCWKIWNS Trigger: TGAGTTCCAGATTTTCCAACACAACAGGAAAGGAATATGTGAGCAGGAGAGAAGGGTCATGTTGGAGCAGCCAGGACTCAGAGCCTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667064.1 ENST00000671376.1 |
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| CDS CCA 90 bp | CTTGGGTTGAAGATCATTCTGCTTCTGATGTGGGAAGTCAGCAGATaGTACCTGAGCCAAAGTGTAGACAGCTGCCCGGAAGATTTAGAC | + |
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Preference number: 5 (lower is better) Translates to: LGLKIILLLMWEVSR*YLSQSVDSCPEDLD Trigger: GTCTAAATCTTCCGGGCAGCTGTCTACACTTTGGCTCAGGTACCATCTGCTGACTTCCCACATCAGAAGCAGAATGATCTTCAACCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000653644.1 ENST00000667064.1 ENST00000667334.1 ENST00000669439.1 |
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| CDS CCA 90 bp | TGCTCTCTTTGCCTGTGTCTTGGGTTGAAGATCATTCTTCTGATGTaGGAAGTCAGCAGATGGTACCTGAGCCAAAGTGTAGACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSLCLCLGLKIILLM*EVSRWYLSQSVDSC Trigger: GCAGCTGTCTACACTTTGGCTCAGGTACCATCTGCTGACTTCCCACATCAGAAGAATGATCTTCAACCCAAGACACAGGCAAAGAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000662880.1 ENST00000667379.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS CCA 90 bp | AGTCATCAAATCCAAATAACTTCAAGCCAGCTCCCAAAGCAAGCCTaGCAAATTGCTCAGCTGACAGCAGGTAAGAGGACTTCCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: SHQIQITSSQLPKQA*QIAQLTAGKRTSRE Trigger: CTCCCTGGAAGTCCTCTTACCTGCTGTCAGCTGAGCAATTTGCCAGGCTTGCTTTGGGAGCTGGCTTGAAGTTATTTGGATTTGATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664193.1 |
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| CDS GCA 90 bp | GATGGTCCTGTGATCACATCTGCAAGTTCTTTCAGGACTCTGGGGTaGCATCTATCTAAGCCAACAGCCATTCCTGCTCTCATTTTAAGC | + |
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Preference number: 5 (lower is better) Translates to: DGPVITSASSFRTLG*HLSKPTAIPALILS Trigger: GCTTAAAATGAGAGCAGGAATGGCTGTTGGCTTAGATAGATGGCACCCCAGAGTCCTGAAAGAACTTGCAGATGTGATCACAGGACCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000653644.1 ENST00000662880.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS CCA 90 bp | TGTCTTGGGTTGAAGATCATTCTTCTGATGTGGGAAGTCAGCAGATaGTACCTGAGCCAAAGTGTAGACAGCTGCCCGGAAGATTTAGAC | + |
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Preference number: 5 (lower is better) Translates to: CLGLKIILLMWEVSR*YLSQSVDSCPEDLD Trigger: GTCTAAATCTTCCGGGCAGCTGTCTACACTTTGGCTCAGGTACCATCTGCTGACTTCCCACATCAGAAGAATGATCTTCAACCCAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000662880.1 ENST00000667379.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS CCA 90 bp | TGCTCTCTTTGCCTGTGTCTTGGGTTGAAGATCATTCTTCTGATGTaGGAAGTCAGCAGATGGTACCTGGTAAAAATACAGACTCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: CSLCLCLGLKIILLM*EVSRWYLVKIQTRR Trigger: CCTGCGAGTCTGTATTTTTACCAGGTACCATCTGCTGACTTCCCACATCAGAAGAATGATCTTCAACCCAAGACACAGGCAAAGAGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000665521.1 ENST00000669368.1 |
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| CDS CCA 90 bp | CTTCTCTCCTGCTCACATATTCCTTTCCTGTTGTGTTGGAAAATCTaGAACTCATTTACCCATCTCCGGTCTTTTGCTGTCTCTCCATTC | + |
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Preference number: 5 (lower is better) Translates to: LLSCSHIPFLLCWKI*NSFTHLRSFAVSPF Trigger: GAATGGAGAGACAGCAAAAGACCGGAGATGGGTAAATGAGTTCCAGATTTTCCAACACAACAGGAAAGGAATATGTGAGCAGGAGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000667064.1 ENST00000671376.1 |
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| CDS CCA 90 bp | AACATGACCCTTCTCTCCTGCTCACATATTCCTTTCCTGTTGTGTTaGAAAATCTGGAACTCATTTACCCATCTCCGGTCTTTTGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: NMTLLSCSHIPFLLC*KIWNSFTHLRSFAV Trigger: GACAGCAAAAGACCGGAGATGGGTAAATGAGTTCCAGATTTTCCAACACAACAGGAAAGGAATATGTGAGCAGGAGAGAAGGGTCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000667064.1 ENST00000671376.1 |
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| CDS CCA 90 bp | CTTGGGTTGAAGATCATTCTGCTTCTGATGTGGGAAGTCAGCAGATaGTACCTTGAATTTATTTACTTGAACGCTACAATGGGAGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LGLKIILLLMWEVSR*YLEFIYLNATMGVL Trigger: CAGCACTCCCATTGTAGCGTTCAAGTAAATAAATTCAAGGTACCATCTGCTGACTTCCCACATCAGAAGCAGAATGATCTTCAACCCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664706.1 |
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| CDS CCA 90 bp | TCTCTTTGCCTGTGTCTTGGGTTGAAGATCATTCTGCTTCTGATGTaGGAAGTCAGCAGATGGTACCTTGAATTTATTTACTTGAACGCT | + |
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Preference number: 5 (lower is better) Translates to: SLCLCLGLKIILLLM*EVSRWYLEFIYLNA Trigger: AGCGTTCAAGTAAATAAATTCAAGGTACCATCTGCTGACTTCCCACATCAGAAGCAGAATGATCTTCAACCCAAGACACAGGCAAAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664706.1 |
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| CDS TCA 90 bp | GAAGATCATTCTGCTTCTGATGTGGGAAGTCAGCAGATGGTACCTTaGATTTATTTACTTGAACGCTACAATGGGAGTGCTGATTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: EDHSASDVGSQQMVP*IYLLERYNGSADFP Trigger: AGGAAAATCAGCACTCCCATTGTAGCGTTCAAGTAAATAAATTCAAGGTACCATCTGCTGACTTCCCACATCAGAAGCAGAATGATCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664706.1 |
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| CDS TCA 90 bp | CCCAACACTAAAAAGATAATAAGTACATGGTATAGTTTCCCTAGATaGCTAAGCCTTCCTACCTCATTATACCCTGAAGACCTGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: PNTKKIISTWYSFPR*LSLPTSLYPEDLNF Trigger: GAAGTTCAGGTCTTCAGGGTATAATGAGGTAGGAAGGCTTAGTCATCTAGGGAAACTATACCATGTACTTATTATCTTTTTAGTGTTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664193.1 |
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| CDS CCA 72 bp | GTCCCTAAAGAGAGAGCTGGAGAGGAGCGGGTGTCGTaGGCTCTGCCACTAGTGAGCTCCGCGCATGTGATT | + |
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Preference number: 6 (lower is better) Translates to: VPKERAGEERVS*ALPLVSSAHVI Trigger: AATCACATGCGCGGAGCTCACTAGTGGCAGAGCCCACGACACCCGCTCCTCTCCAGCTCTCTCTTTAGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558690.2 |
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| CDS CCA 72 bp | GGCCACACACCAGAGCCCTTGCCTGGATTACCATTCTaGGTGTGGAGCCGGGAGTATTCCTGGAGGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: GHTPEPLPGLPF*VWSREYSWRLK Trigger: CTTCAGCCTCCAGGAATACTCCCGGCTCCACACCCAGAATGGTAATCCAGGCAAGGGCTCTGGTGTGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000662880.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS GCA 72 bp | GTAATAGGTGGCAGTGTGGCCACACACCAGAGCCCTTaGCTGGATTACCATTCTGGGTGTGGAGCCGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: VIGGSVATHQSP*LDYHSGCGAGS Trigger: ACTCCCGGCTCCACACCCAGAATGGTAATCCAGGCAAGGGCTCTGGTGTGTGGCCACACTGCCACCTATTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000662880.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS TCA 72 bp | CATTCTGGGTGTGGAGCCGGGAGTATTCCTGGAGGCTaGAGGAAAGGATCCAGACTCAGTCTGCGGAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: HSGCGAGSIPGG*RKGSRLSLRKG Trigger: GCCTTTCCGCAGACTGAGTCTGGATCCTTTCCTTCAGCCTCCAGGAATACTCCCGGCTCCACACCCAGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000662880.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS CCA 72 bp | GGATCCAGACTCAGTCTGCGGAAAGGCTCTGAGTCCTaGCTGCTCCAACATGACCCTTCTCTCCTGCTCACA | + |
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Preference number: 6 (lower is better) Translates to: GSRLSLRKGSES*LLQHDPSLLLT Trigger: TGTGAGCAGGAGAGAAGGGTCATGTTGGAGCAGCCAGGACTCAGAGCCTTTCCGCAGACTGAGTCTGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000662880.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS GCA 72 bp | TTCCTGGAGGCTGAAGGAAAGGATCCAGACTCAGTCTaGGGAAAGGCTCTGAGTCCTGGCTGCTCCAACATG | + |
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Preference number: 6 (lower is better) Translates to: FLEAEGKDPDSV*GKALSPGCSNM Trigger: CATGTTGGAGCAGCCAGGACTCAGAGCCTTTCCGCAGACTGAGTCTGGATCCTTTCCTTCAGCCTCCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000662880.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS TCA 72 bp | CTTCCTTTGAAAGGTTTCTCTCTTTACTCAGTGCGATaGTTCTGGGGGTGCCTCGATCGCAGCACCAGACGC | + |
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Preference number: 6 (lower is better) Translates to: LPLKGFSLYSVR*FWGCLDRSTRR Trigger: GCGTCTGGTGCTGCGATCGAGGCACCCCCAGAATCATCGCACTGAGTAAAGAGAGAAACCTTTCAAAGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664706.1 |
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| CDS GCA 72 bp | CTGAGTCCTGGCTGCTCCAACATGACCCTTCTCTCCTaGTCACATATTCCCATCTCCGGTCTTTTGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LSPGCSNMTLLS*SHIPISGLLLS Trigger: AGACAGCAAAAGACCGGAGATGGGAATATGTGAGCAGGAGAGAAGGGTCATGTTGGAGCAGCCAGGACTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667334.1 ENST00000667379.1 |
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| CDS CAA 72 bp | TGGAAAGAGAGGCACAGAGAAGTTGAGTCACTGCATTaGGACCCGCAGGTAATAGGTGGCAGTGTGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: WKERHREVESLH*DPQVIGGSVAT Trigger: TGTGGCCACACTGCCACCTATTACCTGCGGGTCCAAATGCAGTGACTCAACTTCTCTGTGCCTCTCTTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000662880.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS CAA 90 bp | TTATACATGTGGAAAGAGAGGCACAGAGAAGTTGAGTCACTGCATTaGGACCCGCAGGTAATAGGTGGCAGTGTGGCCACACACCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LYMWKERHREVESLH*DPQVIGGSVATHQS Trigger: GCTCTGGTGTGTGGCCACACTGCCACCTATTACCTGCGGGTCCAAATGCAGTGACTCAACTTCTCTGTGCCTCTCTTTCCACATGTATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000662880.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS GCA 72 bp | CTGAGTCCTGGCTGCTCCAACATGACCCTTCTCTCCTaGTCACATATTCCAATCCCTTCCCCAAGACTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LSPGCSNMTLLS*SHIPIPSPRLK Trigger: TTTCAGTCTTGGGGAAGGGATTGGAATATGTGAGCAGGAGAGAAGGGTCATGTTGGAGCAGCCAGGACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000558690.2 ENST00000653644.1 ENST00000664193.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 |
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| CDS GCA 72 bp | CGGTTTCTCCGGTTCAGATGGTCCTGTGATCACATCTaGAAGTTCTTTCAGGACTCTGGGGTGCCATCTATC | + |
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Preference number: 6 (lower is better) Translates to: RFLRFRWSCDHI*KFFQDSGVPSI Trigger: GATAGATGGCACCCCAGAGTCCTGAAAGAACTTGCAGATGTGATCACAGGACCATCTGAACCGGAGAAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000653644.1 ENST00000662880.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS GCA 72 bp | GTGATCACATCTGCAAGTTCTTTCAGGACTCTGGGGTaGCATCTATCTAAGCCAACAGCCATTCCTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: VITSASSFRTLG*HLSKPTAIPAL Trigger: GAGAGCAGGAATGGCTGTTGGCTTAGATAGATGGCACCCCAGAGTCCTGAAAGAACTTGCAGATGTGATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000653644.1 ENST00000662880.1 ENST00000664706.1 ENST00000665521.1 ENST00000665752.1 ENST00000667064.1 ENST00000667334.1 ENST00000667379.1 ENST00000669368.1 ENST00000669439.1 ENST00000669526.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS TCA 72 bp | CAGCTGGGGCTGCTGGAGTTGGCAAACAGAAATGCCTaGCACCCAGCGGAATTTGAATTTCAGATAAACACT | + |
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Preference number: 6 (lower is better) Translates to: QLGLLELANRNA*HPAEFEFQINT Trigger: AGTGTTTATCTGAAATTCAAATTCCGCTGGGTGTCAGGCATTTCTGTTTGCCAACTCCAGCAGCCCCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664193.1 |
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| CDS GCA 72 bp | CTGAGTCCTGGCTGCTCCAACATGACCCTTCTCTCCTaGTCACATATTCCTTTCCTGTTGTGTTGGAAAATC | + |
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Preference number: 6 (lower is better) Translates to: LSPGCSNMTLLS*SHIPFLLCWKI Trigger: GATTTTCCAACACAACAGGAAAGGAATATGTGAGCAGGAGAGAAGGGTCATGTTGGAGCAGCCAGGACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667064.1 ENST00000671376.1 |
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| CDS CCA 72 bp | TGCCTGTGTCTTGGGTTGAAGATCATTCTTCTGATGTaGGAAGTCAGCAGATGGTACCTGAGCCAAAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: CLCLGLKIILLM*EVSRWYLSQSV Trigger: TACACTTTGGCTCAGGTACCATCTGCTGACTTCCCACATCAGAAGAATGATCTTCAACCCAAGACACAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000662880.1 ENST00000667379.1 ENST00000671295.1 ENST00000671376.1 |
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| CDS CAA 72 bp | CCTTCTCTCCTGCTCACATATTCCTTTCCTGTTGTGTaGGAAAATCTGGAACTCATTTACCCATCTCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: PSLLLTYSFPVV*ENLELIYPSPV Trigger: GACCGGAGATGGGTAAATGAGTTCCAGATTTTCCAACACAACAGGAAAGGAATATGTGAGCAGGAGAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667064.1 ENST00000671376.1 |
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| CDS CAA 90 bp | CTTCTGATGTGGGAAGTCAGCAGATGGTACCTTGAATTTATTTACTaGAACGCTACAATGGGAGTGCTGATTTTCCTCTGCCAAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: LLMWEVSRWYLEFIY*NATMGVLIFLCQAS Trigger: GGATGCTTGGCAGAGGAAAATCAGCACTCCCATTGTAGCGTTCAAGTAAATAAATTCAAGGTACCATCTGCTGACTTCCCACATCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664706.1 |
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| CDS CAA 90 bp | CAACATGACCCTTCTCTCCTGCTCACATATTCCTTTCCTGTTGTGTaGGAAAATCTGGAACTCATTTACCCATCTCCGGTCTTTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: QHDPSLLLTYSFPVV*ENLELIYPSPVFCC Trigger: ACAGCAAAAGACCGGAGATGGGTAAATGAGTTCCAGATTTTCCAACACAACAGGAAAGGAATATGTGAGCAGGAGAGAAGGGTCATGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000667064.1 ENST00000671376.1 |
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| CDS CAA 90 bp | TGCTCCAACATGACCCTTCTCTCCTGCTCACATATTCCTTTCCTGTaGTGTTGGAAAATCTGGAACTCATTTACCCATCTCCGGTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: CSNMTLLSCSHIPFL*CWKIWNSFTHLRSF Trigger: AAAAGACCGGAGATGGGTAAATGAGTTCCAGATTTTCCAACACAACAGGAAAGGAATATGTGAGCAGGAGAGAAGGGTCATGTTGGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667064.1 ENST00000671376.1 |
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| CDS CCA 72 bp | TTGAAGATCATTCTTCTGATGTGGGAAGTCAGCAGATaGTACCTGGTAAAAATACAGACTCGCAGGTCACAC | + |
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Preference number: 6 (lower is better) Translates to: LKIILLMWEVSR*YLVKIQTRRSH Trigger: GTGTGACCTGCGAGTCTGTATTTTTACCAGGTACCATCTGCTGACTTCCCACATCAGAAGAATGATCTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000665521.1 ENST00000669368.1 |
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| CDS CCA 72 bp | TGCCTGTGTCTTGGGTTGAAGATCATTCTTCTGATGTaGGAAGTCAGCAGATGGTACCTGGTAAAAATACAG | + |
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Preference number: 6 (lower is better) Translates to: CLCLGLKIILLM*EVSRWYLVKIQ Trigger: CTGTATTTTTACCAGGTACCATCTGCTGACTTCCCACATCAGAAGAATGATCTTCAACCCAAGACACAGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000665521.1 ENST00000669368.1 |
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| CDS CCA 72 bp | CTTCTCTCCTGCTCACATATTCCTTTCCTGTTGTGTTaGAAAATCTGGAACTCATTTACCCATCTCCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LLSCSHIPFLLC*KIWNSFTHLRS Trigger: AGACCGGAGATGGGTAAATGAGTTCCAGATTTTCCAACACAACAGGAAAGGAATATGTGAGCAGGAGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667064.1 ENST00000671376.1 |
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| CDS TCA 72 bp | TCTGCTTCTGATGTGGGAAGTCAGCAGATGGTACCTTaGATTTATTTACTTGAACGCTACAATGGGAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SASDVGSQQMVP*IYLLERYNGSA Trigger: AGCACTCCCATTGTAGCGTTCAAGTAAATAAATTCAAGGTACCATCTGCTGACTTCCCACATCAGAAGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664706.1 |
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| CDS TCA 72 bp | AGGCAAGTTGTACCCAATATCGACAATGATTCCAGGTaGTCTGATGTGGGGTTGACTATATATCACACCATG | + |
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Preference number: 6 (lower is better) Translates to: RQVVPNIDNDSR*SDVGLTIYHTM Trigger: CATGGTGTGATATATAGTCAACCCCACATCAGATCACCTGGAATCATTGTCGATATTGGGTACAACTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000665521.1 ENST00000665752.1 ENST00000669368.1 |
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| CDS CCA 72 bp | TGCTCACATATTCCTTTCCTGTTGTGTTGGAAAATCTaGAACTCATTTACCCATCTCCGGTCTTTTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: CSHIPFLLCWKI*NSFTHLRSFAV Trigger: GACAGCAAAAGACCGGAGATGGGTAAATGAGTTCCAGATTTTCCAACACAACAGGAAAGGAATATGTGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000667064.1 ENST00000671376.1 |
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| CDS CAA 72 bp | TGGGAAGTCAGCAGATGGTACCTTGAATTTATTTACTaGAACGCTACAATGGGAGTGCTGATTTTCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: WEVSRWYLEFIY*NATMGVLIFLC Trigger: GCAGAGGAAAATCAGCACTCCCATTGTAGCGTTCAAGTAAATAAATTCAAGGTACCATCTGCTGACTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664706.1 |
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| CDS CCA 72 bp | AAGATCATTCTGCTTCTGATGTGGGAAGTCAGCAGATaGTACCTTGAATTTATTTACTTGAACGCTACAATG | + |
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Preference number: 6 (lower is better) Translates to: KIILLLMWEVSR*YLEFIYLNATM Trigger: CATTGTAGCGTTCAAGTAAATAAATTCAAGGTACCATCTGCTGACTTCCCACATCAGAAGCAGAATGATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664706.1 |
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| CDS TCA 72 bp | AAAAAGATAATAAGTACATGGTATAGTTTCCCTAGATaGCTAAGCCTTCCTACCTCATTATACCCTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: KKIISTWYSFPR*LSLPTSLYPED Trigger: GTCTTCAGGGTATAATGAGGTAGGAAGGCTTAGTCATCTAGGGAAACTATACCATGTACTTATTATCTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664193.1 |
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