Pregenerated sensors for LINC01894 (Homo sapiens)
Ensembl gene IDs: ENSG00000264345Ensembl transcript IDs: ENST00000580984.1, ENST00000582697.1, ENST00000665916.1, ENST00000670277.1, ENST00000670369.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGGGTGAGGCGGGGCTGGGAGACTACTGGATGCAGGAAGGAGGATaGAATGGGAGTGAAGCCTGCCGACAGCTGCTGGAGATCGCATAT | + |
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Preference number: 5 (lower is better) Translates to: EGEAGLGDYWMQEGG*NGSEACRQLLEIAY Trigger: ATATGCGATCTCCAGCAGCTGTCGGCAGGCTTCACTCCCATTCCATCCTCCTTCCTGCATCCAGTAGTCTCCCAGCCCCGCCTCACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS TCA 90 bp | GGGGCTGGGAGACTACTGGATGCAGGAAGGAGGATGGAATGGGAGTaGAGCCTGCCGACAGCTGCTGGAGATCGCATATCTCTGTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GAGRLLDAGRRMEWE*SLPTAAGDRISLWQ Trigger: CTGCCACAGAGATATGCGATCTCCAGCAGCTGTCGGCAGGCTTCACTCCCATTCCATCCTCCTTCCTGCATCCAGTAGTCTCCCAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS TCA 90 bp | AGCCAGTGTCCTCCACAGGAGCAATGGCCTCATGGTGAGTGGTTGTaGACGGAGCTGATGACGTCACCATGGCACTCATGCCTGAGATGT | + |
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Preference number: 5 (lower is better) Translates to: SQCPPQEQWPHGEWL*TELMTSPWHSCLRC Trigger: ACATCTCAGGCATGAGTGCCATGGTGACGTCATCAGCTCCGTTCACAACCACTCACCATGAGGCCATTGCTCCTGTGGAGGACACTGGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS CCA 90 bp | AGAGGGCGCACTCCGTACAAGCCAGGACTAAAATGGAACATCCAGTaGCTCCTGGGGGCCATTGTCCTGAGCTCAGAAAGGAGTCACTTG | + |
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Preference number: 5 (lower is better) Translates to: RGRTPYKPGLKWNIQ*LLGAIVLSSERSHL Trigger: CAAGTGACTCCTTTCTGAGCTCAGGACAATGGCCCCCAGGAGCCACTGGATGTTCCATTTTAGTCCTGGCTTGTACGGAGTGCGCCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665916.1 |
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| CDS CCA 90 bp | CTCCTCTCAGAAAGAGGGCGCACTCCGTACAAGCCAGGACTAAAATaGAACATCCAGTGGCTCCTGGGGGCCATTGTCCTGAGCTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: LLSERGRTPYKPGLK*NIQWLLGAIVLSSE Trigger: TTCTGAGCTCAGGACAATGGCCCCCAGGAGCCACTGGATGTTCCATTTTAGTCCTGGCTTGTACGGAGTGCGCCCTCTTTCTGAGAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665916.1 |
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| CDS TCA 90 bp | ATGAGTCCTAAGCCAGTGTCCTCCACAGGAGCAATGGCCTCATGGTaGGTGGTTGTGAACGGAGCTGATGACGTCACCATGGCACTCATG | + |
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Preference number: 5 (lower is better) Translates to: MSPKPVSSTGAMASW*VVVNGADDVTMALM Trigger: CATGAGTGCCATGGTGACGTCATCAGCTCCGTTCACAACCACTCACCATGAGGCCATTGCTCCTGTGGAGGACACTGGCTTAGGACTCAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS GCA 90 bp | GGATGCAGGAAGGAGGATGGAATGGGAGTGAAGCCTGCCGACAGCTaGTGGAGATCGCATATCTCTGTGGCAGAGTTATTGCTGGGACAA | + |
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Preference number: 5 (lower is better) Translates to: GCRKEDGMGVKPADS*WRSHISVAELLLGQ Trigger: TTGTCCCAGCAATAACTCTGCCACAGAGATATGCGATCTCCAGCAGCTGTCGGCAGGCTTCACTCCCATTCCATCCTCCTTCCTGCATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS GCA 90 bp | GGAGACTACTGGATGCAGGAAGGAGGATGGAATGGGAGTGAAGCCTaGCGACAGCTGCTGGAGATCGCATATCTCTGTGGCAGAGTTATT | + |
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Preference number: 5 (lower is better) Translates to: GDYWMQEGGWNGSEA*RQLLEIAYLCGRVI Trigger: AATAACTCTGCCACAGAGATATGCGATCTCCAGCAGCTGTCGGCAGGCTTCACTCCCATTCCATCCTCCTTCCTGCATCCAGTAGTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS CCA 90 bp | CCGACAGCTGCTGGAGATCGCATATCTCTGTGGCAGAGTTATTGCTaGGACAATACCACATGGATCCCTTCCAGTACCCTAGCAAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: PTAAGDRISLWQSYC*DNTTWIPSSTLARG Trigger: CCCTCTTGCTAGGGTACTGGAAGGGATCCATGTGGTATTGTCCCAGCAATAACTCTGCCACAGAGATATGCGATCTCCAGCAGCTGTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS CCA 90 bp | TGCAGGAAGGAGGATGGAATGGGAGTGAAGCCTGCCGACAGCTGCTaGAGATCGCATATCTCTGTGGCAGAGTTATTGCTGGGACAATAC | + |
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Preference number: 5 (lower is better) Translates to: CRKEDGMGVKPADSC*RSHISVAELLLGQY Trigger: GTATTGTCCCAGCAATAACTCTGCCACAGAGATATGCGATCTCCAGCAGCTGTCGGCAGGCTTCACTCCCATTCCATCCTCCTTCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS GCA 90 bp | CTGCCGACAGCTGCTGGAGATCGCATATCTCTGTGGCAGAGTTATTaGTGGGACAATACCACATGGATCCCTTCCAGTACCCTAGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: LPTAAGDRISLWQSY*WDNTTWIPSSTLAR Trigger: TCTTGCTAGGGTACTGGAAGGGATCCATGTGGTATTGTCCCAGCAATAACTCTGCCACAGAGATATGCGATCTCCAGCAGCTGTCGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS CCA 90 bp | GATCGCATATCTCTGTGGCAGAGTTATTGCTGGGACAATACCACATaGATCCCTTCCAGTACCCTAGCAAGAGGGCATAATCTCCACATG | + |
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Preference number: 5 (lower is better) Translates to: DRISLWQSYCWDNTT*IPSSTLARGHNLHM Trigger: CATGTGGAGATTATGCCCTCTTGCTAGGGTACTGGAAGGGATCCATGTGGTATTGTCCCAGCAATAACTCTGCCACAGAGATATGCGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS CCA 90 bp | GGGAATTGTTCCAGTTCTCTCCATCTCATTGTGTCTTGGAGCTGGTaGAAGGAACACTTACAGAGACACCTTCCTGAGGTACTACTTCAT | + |
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Preference number: 5 (lower is better) Translates to: GNCSSSLHLIVSWSW*KEHLQRHLPEVLLH Trigger: ATGAAGTAGTACCTCAGGAAGGTGTCTCTGTAAGTGTTCCTTCCACCAGCTCCAAGACACAATGAGATGGAGAGAACTGGAACAATTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS TCA 90 bp | CCAAATCCAAACAATTGCTTTATTGGGCTGCAGAAAGGAGTCACTTaGAAGCTTTTAGGCCAGACCGTGCTCGGGCTCAGATTTCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: PNPNNCFIGLQKGVT*KLLGQTVLGLRFLF Trigger: GAAAAGAAATCTGAGCCCGAGCACGGTCTGGCCTAAAAGCTTTCAAGTGACTCCTTTCTGCAGCCCAATAAAGCAATTGTTTGGATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582697.1 |
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| CDS CCA 90 bp | ATAGGGAATTGTTCCAGTTCTCTCCATCTCATTGTGTCTTGGAGCTaGTGGAAGGAACACTTACAGAGACACCTTCCTGAGGTACTACTT | + |
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Preference number: 5 (lower is better) Translates to: IGNCSSSLHLIVSWS*WKEHLQRHLPEVLL Trigger: AAGTAGTACCTCAGGAAGGTGTCTCTGTAAGTGTTCCTTCCACCAGCTCCAAGACACAATGAGATGGAGAGAACTGGAACAATTCCCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS GCA 90 bp | AGTTGGTTAATCACCAAGAAGAATGCTGGAAGAAAGCTACTCATATaGTTTTCATCTCAGCATCCAATTCCCAGGAAACCTCCTCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: SWLITKKNAGRKLLI*FSSQHPIPRKPPLR Trigger: TCTGAGAGGAGGTTTCCTGGGAATTGGATGCTGAGATGAAAAGCATATGAGTAGCTTTCTTCCAGCATTCTTCTTGGTGATTAACCAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665916.1 |
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| CDS CCA 90 bp | GGGCTCAGATTTCTTTTCTTTCAGCCCTTTGATGAACAACTCATATaGAGATTCAAGCGTCTTGTGCCTGGTTTGAATTTAAGCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: GLRFLFFQPFDEQLI*RFKRLVPGLNLSCC Trigger: GCAACAGCTTAAATTCAAACCAGGCACAAGACGCTTGAATCTCCATATGAGTTGTTCATCAAAGGGCTGAAAGAAAAGAAATCTGAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000580984.1 ENST00000582697.1 ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS GCA 90 bp | AGTTGGTTAATCACCAAGAAGAATGCTGGAAGAAAGCTACTCATATaGTTTTCATCTCAGCATCCAATTCCCAGGAAACCAGAAAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: SWLITKKNAGRKLLI*FSSQHPIPRKPERS Trigger: ACTCCTTTCTGGTTTCCTGGGAATTGGATGCTGAGATGAAAAGCATATGAGTAGCTTTCTTCCAGCATTCTTCTTGGTGATTAACCAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670369.1 |
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| CDS TCA 72 bp | CCTCCACAGGAGCAATGGCCTCATGGTGAGTGGTTGTaGACGGAGCTGATGACGTCACCATGGCACTCATGC | + |
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Preference number: 6 (lower is better) Translates to: PPQEQWPHGEWL*TELMTSPWHSC Trigger: GCATGAGTGCCATGGTGACGTCATCAGCTCCGTTCACAACCACTCACCATGAGGCCATTGCTCCTGTGGAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000580984.1 ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS GCA 72 bp | TGGATGCAGGAAGGAGGATGGAATGGGAGTGAAGCCTaGCGACAGCTGCTGGAGATCGCATATCTCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: WMQEGGWNGSEA*RQLLEIAYLCG Trigger: GCCACAGAGATATGCGATCTCCAGCAGCTGTCGGCAGGCTTCACTCCCATTCCATCCTCCTTCCTGCATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS CAA 72 bp | CTGGGGGCCATTGTCCTGAGCTCAGAAAGGAGTCACTaGAAAGCTTTTAGGCCAGACCGTGCTCGGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LGAIVLSSERSH*KAFRPDRARAQ Trigger: CTGAGCCCGAGCACGGTCTGGCCTAAAAGCTTTCAAGTGACTCCTTTCTGAGCTCAGGACAATGGCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665916.1 |
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| CDS TCA 72 bp | AGACTACTGGATGCAGGAAGGAGGATGGAATGGGAGTaGAGCCTGCCGACAGCTGCTGGAGATCGCATATCT | + |
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Preference number: 6 (lower is better) Translates to: RLLDAGRRMEWE*SLPTAAGDRIS Trigger: AGATATGCGATCTCCAGCAGCTGTCGGCAGGCTTCACTCCCATTCCATCCTCCTTCCTGCATCCAGTAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS CCA 72 bp | ACTCCGTACAAGCCAGGACTAAAATGGAACATCCAGTaGCTCCTGGGGGCCATTGTCCTGAGCTCAGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: TPYKPGLKWNIQ*LLGAIVLSSER Trigger: CCTTTCTGAGCTCAGGACAATGGCCCCCAGGAGCCACTGGATGTTCCATTTTAGTCCTGGCTTGTACGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665916.1 |
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| CDS CCA 72 bp | GAGGATGGAATGGGAGTGAAGCCTGCCGACAGCTGCTaGAGATCGCATATCTCTGTGGCAGAGTTATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: EDGMGVKPADSC*RSHISVAELLL Trigger: CAGCAATAACTCTGCCACAGAGATATGCGATCTCCAGCAGCTGTCGGCAGGCTTCACTCCCATTCCATCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS CAA 90 bp | CAGTGGCTCCTGGGGGCCATTGTCCTGAGCTCAGAAAGGAGTCACTaGAAAGCTTTTAGGCCAGACCGTGCTCGGGCTCAGATTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: QWLLGAIVLSSERSH*KAFRPDRARAQISF Trigger: AAAAGAAATCTGAGCCCGAGCACGGTCTGGCCTAAAAGCTTTCAAGTGACTCCTTTCTGAGCTCAGGACAATGGCCCCCAGGAGCCACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665916.1 |
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| CDS CAA 90 bp | CCTGCCGACAGCTGCTGGAGATCGCATATCTCTGTGGCAGAGTTATaGCTGGGACAATACCACATGGATCCCTTCCAGTACCCTAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: PADSCWRSHISVAEL*LGQYHMDPFQYPSK Trigger: CTTGCTAGGGTACTGGAAGGGATCCATGTGGTATTGTCCCAGCAATAACTCTGCCACAGAGATATGCGATCTCCAGCAGCTGTCGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS GCA 72 bp | AAGGAGGATGGAATGGGAGTGAAGCCTGCCGACAGCTaGTGGAGATCGCATATCTCTGTGGCAGAGTTATTG | + |
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Preference number: 6 (lower is better) Translates to: KEDGMGVKPADS*WRSHISVAELL Trigger: CAATAACTCTGCCACAGAGATATGCGATCTCCAGCAGCTGTCGGCAGGCTTCACTCCCATTCCATCCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS CCA 72 bp | AGCCTGCCGACAGCTGCTGGAGATCGCATATCTCTGTaGCAGAGTTATTGCTGGGACAATACCACATGGATC | + |
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Preference number: 6 (lower is better) Translates to: SLPTAAGDRISL*QSYCWDNTTWI Trigger: GATCCATGTGGTATTGTCCCAGCAATAACTCTGCCACAGAGATATGCGATCTCCAGCAGCTGTCGGCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS TCA 72 bp | AGCATCCAATTCCCAGGAAACCAGAAAGGAGTCACTTaGAAGCTTTTAGGCCAGACCGTGCTCGGGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SIQFPGNQKGVT*KLLGQTVLGLR Trigger: TCTGAGCCCGAGCACGGTCTGGCCTAAAAGCTTTCAAGTGACTCCTTTCTGGTTTCCTGGGAATTGGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670369.1 |
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| CDS GCA 72 bp | GCTGCTGGAGATCGCATATCTCTGTGGCAGAGTTATTaGTGGGACAATACCACATGGATCCCTTCCAGTACC | + |
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Preference number: 6 (lower is better) Translates to: AAGDRISLWQSY*WDNTTWIPSST Trigger: GGTACTGGAAGGGATCCATGTGGTATTGTCCCAGCAATAACTCTGCCACAGAGATATGCGATCTCCAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS CCA 72 bp | GCTGGAGATCGCATATCTCTGTGGCAGAGTTATTGCTaGGACAATACCACATGGATCCCTTCCAGTACCCTA | + |
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Preference number: 6 (lower is better) Translates to: AGDRISLWQSYC*DNTTWIPSSTL Trigger: TAGGGTACTGGAAGGGATCCATGTGGTATTGTCCCAGCAATAACTCTGCCACAGAGATATGCGATCTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS CAA 72 bp | ATAGAATGTGGAACCTGTACCCTCACTCCTACTGTCTaGGTCCCAAAGCCCCTCCTCAGTACAAAAGGACTG | + |
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Preference number: 6 (lower is better) Translates to: IECGTCTLTPTV*VPKPLLSTKGL Trigger: CAGTCCTTTTGTACTGAGGAGGGGCTTTGGGACCAAGACAGTAGGAGTGAGGGTACAGGTTCCACATTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS CAA 72 bp | AGCTGCTGGAGATCGCATATCTCTGTGGCAGAGTTATaGCTGGGACAATACCACATGGATCCCTTCCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: SCWRSHISVAEL*LGQYHMDPFQY Trigger: GTACTGGAAGGGATCCATGTGGTATTGTCCCAGCAATAACTCTGCCACAGAGATATGCGATCTCCAGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS TCA 72 bp | AACAATTGCTTTATTGGGCTGCAGAAAGGAGTCACTTaGAAGCTTTTAGGCCAGACCGTGCTCGGGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: NNCFIGLQKGVT*KLLGQTVLGLR Trigger: TCTGAGCCCGAGCACGGTCTGGCCTAAAAGCTTTCAAGTGACTCCTTTCTGCAGCCCAATAAAGCAATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582697.1 |
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| CDS TCA 72 bp | CAGGACTTCTTTCATTTGCAACAGAAAGGAGTCACTTaGAAGCTTTTAGGCCAGACCGTGCTCGGGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: QDFFHLQQKGVT*KLLGQTVLGLR Trigger: TCTGAGCCCGAGCACGGTCTGGCCTAAAAGCTTTCAAGTGACTCCTTTCTGTTGCAAATGAAAGAAGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000580984.1 ENST00000670277.1 |
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| CDS CCA 72 bp | TCCAGTTCTCTCCATCTCATTGTGTCTTGGAGCTGGTaGAAGGAACACTTACAGAGACACCTTCCTGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: SSSLHLIVSWSW*KEHLQRHLPEV Trigger: TACCTCAGGAAGGTGTCTCTGTAAGTGTTCCTTCCACCAGCTCCAAGACACAATGAGATGGAGAGAACTGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS CCA 72 bp | TGTTCCAGTTCTCTCCATCTCATTGTGTCTTGGAGCTaGTGGAAGGAACACTTACAGAGACACCTTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: CSSSLHLIVSWS*WKEHLQRHLPE Trigger: CTCAGGAAGGTGTCTCTGTAAGTGTTCCTTCCACCAGCTCCAAGACACAATGAGATGGAGAGAACTGGAACA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS CCA 72 bp | TCTCTGTGGCAGAGTTATTGCTGGGACAATACCACATaGATCCCTTCCAGTACCCTAGCAAGAGGGCATAAT | + |
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Preference number: 6 (lower is better) Translates to: SLWQSYCWDNTT*IPSSTLARGHN Trigger: ATTATGCCCTCTTGCTAGGGTACTGGAAGGGATCCATGTGGTATTGTCCCAGCAATAACTCTGCCACAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS CAA 72 bp | AAACAATTGCTTTATTGGGCTGCAGAAAGGAGTCACTaGAAAGCTTTTAGGCCAGACCGTGCTCGGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: KQLLYWAAERSH*KAFRPDRARAQ Trigger: CTGAGCCCGAGCACGGTCTGGCCTAAAAGCTTTCAAGTGACTCCTTTCTGCAGCCCAATAAAGCAATTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582697.1 |
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| CDS CAA 90 bp | CCCAAATCCAAACAATTGCTTTATTGGGCTGCAGAAAGGAGTCACTaGAAAGCTTTTAGGCCAGACCGTGCTCGGGCTCAGATTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: PKSKQLLYWAAERSH*KAFRPDRARAQISF Trigger: AAAAGAAATCTGAGCCCGAGCACGGTCTGGCCTAAAAGCTTTCAAGTGACTCCTTTCTGCAGCCCAATAAAGCAATTGTTTGGATTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582697.1 |
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| CDS CAA 72 bp | CCGTGCTCGGGCTCAGATTTCTTTTCTTTCAGCCCTTaGATGAACAACTCATATGGAGATTCAAGCGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: PCSGSDFFSFSP*MNNSYGDSSVL Trigger: CAAGACGCTTGAATCTCCATATGAGTTGTTCATCAAAGGGCTGAAAGAAAAGAAATCTGAGCCCGAGCACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000580984.1 ENST00000582697.1 ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS CAA 90 bp | ACTGGAAATGTAATCTGGGGCCAGTCTTTGCCACACCACATGCCATaGCCTTCATTACTAGATAGTTCATGTGAAAATATCCAGCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: TGNVIWGQSLPHHMP*PSLLDSSCENIQLQ Trigger: TTGCAGCTGGATATTTTCACATGAACTATCTAGTAATGAAGGCAATGGCATGTGGTGTGGCAAAGACTGGCCCCAGATTACATTTCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS GCA 72 bp | ACTAGAAGCAGGCTGGGTAACAACACGGGAAGTAAGTaGCACATTCATCTGTATTGTATAGTGAGTAGCATT | + |
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Preference number: 6 (lower is better) Translates to: TRSRLGNNTGSK*HIHLYCIVSSI Trigger: AATGCTACTCACTATACAATACAGATGAATGTGGCACTTACTTCCCGTGTTGTTACCCAGCCTGCTTCTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670277.1 |
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| CDS CAA 72 bp | GTAATCTGGGGCCAGTCTTTGCCACACCACATGCCATaGCCTTCATTACTAGATAGTTCATGTGAAAATATC | + |
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Preference number: 6 (lower is better) Translates to: VIWGQSLPHHMP*PSLLDSSCENI Trigger: GATATTTTCACATGAACTATCTAGTAATGAAGGCAATGGCATGTGGTGTGGCAAAGACTGGCCCCAGATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS TCA 72 bp | ACTCAACTCAGGCTTTCTTCCTTTCCCCACGACTGCTaGCCAGGTTTTGATATATCTTTGGATATTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: TQLRLSSFPHDC*PGFDISLDIHL Trigger: AAGATGAATATCCAAAGATATATCAAAACCTGGTCAGCAGTCGTGGGGAAAGGAAGAAAGCCTGAGTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000580984.1 ENST00000582697.1 ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS CAA 72 bp | GTTCATGTGAAAATATCCAGCTGCAATCATAGGGAATaGTTCCAGTTCTCTCCATCTCATTGTGTCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: VHVKISSCNHRE*FQFSPSHCVLE Trigger: CTCCAAGACACAATGAGATGGAGAGAACTGGAACAATTCCCTATGATTGCAGCTGGATATTTTCACATGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS CAA 90 bp | CATATGGAGATTCAAGCGTCTTGTGCCTGGTTTGAATTTAAGCTGTaGCTGACTTTAGTGGAAAACTTTCATAAACTCAACTCAGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: HMEIQASCAWFEFKL*LTLVENFHKLNSGF Trigger: AAAGCCTGAGTTGAGTTTATGAAAGTTTTCCACTAAAGTCAGCAACAGCTTAAATTCAAACCAGGCACAAGACGCTTGAATCTCCATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000580984.1 ENST00000582697.1 ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS CCA 72 bp | TTTCTTTTCTTTCAGCCCTTTGATGAACAACTCATATaGAGATTCAAGCGTCTTGTGCCTGGTTTGAATTTA | + |
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Preference number: 6 (lower is better) Translates to: FLFFQPFDEQLI*RFKRLVPGLNL Trigger: TAAATTCAAACCAGGCACAAGACGCTTGAATCTCCATATGAGTTGTTCATCAAAGGGCTGAAAGAAAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000580984.1 ENST00000582697.1 ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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| CDS GCA 72 bp | TTTGATGATAAATATACCTTGTCTTGGATTCAATATTaGTTAGGCTCTGTCCACAGTTTTAGGCAAAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: FDDKYTLSWIQY*LGSVHSFRQRN Trigger: GTTTCTTTGCCTAAAACTGTGGACAGAGCCTAAGCAATATTGAATCCAAGACAAGGTATATTTATCATCAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670277.1 ENST00000670369.1 |
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| CDS CAA 72 bp | GAGTCATTCATTCTCAGTGTGATCATTATTATCAACTaGACGGAAAACAATTTTTCTGCAAGAGAGACTGAA | + |
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Preference number: 6 (lower is better) Translates to: ESFILSVIIIIN*TENNFSARETE Trigger: TTCAGTCTCTCTTGCAGAAAAATTGTTTTCCGTCAAGTTGATAATAATGATCACACTGAGAATGAATGACTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000580984.1 ENST00000582697.1 ENST00000665916.1 ENST00000670277.1 ENST00000670369.1 |
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