Pregenerated sensors for LINC01890 (Homo sapiens)
Ensembl gene IDs: ENSG00000228329Ensembl transcript IDs: ENST00000415448.1, ENST00000652076.1, ENST00000653356.1, ENST00000654212.1, ENST00000654239.1, ENST00000655209.1, ENST00000657362.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGGGCCACATTCAGAGCTGTCCTGGGCCATACACAGCCCGCGGGCTaGAGGTTAGACAAGCTTGGGCTACATGGTACCAGTGTTAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: WATFRAVLGHTQPAG*RLDKLGLHGTSVSV Trigger: CACGCTAACACTGGTACCATGTAGCCCAAGCTTGTCTAACCTGCAGCCCGCGGGCTGTGTATGGCCCAGGACAGCTCTGAATGTGGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS TCA 90 bp | GCAGTCTTTCTGCCCTGTTTGCCTGGTGGCACTCCGCTCTCACAGTaGGACTTGCCACTAGGAAGGGTGGAAATTCTTCCCAGCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: AVFLPCLPGGTPLSQ*DLPLGRVEILPSSS Trigger: AGAGGAGCTGGGAAGAATTTCCACCCTTCCTAGTGGCAAGTCTCACTGTGAGAGCGGAGTGCCACCAGGCAAACAGGGCAGAAAGACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS TCA 90 bp | GTGAGACTTGCCACTAGGAAGGGTGGAAATTCTTCCCAGCTCCTCTaGGTAGTGGGGCTCGAGGATGAGGGTCCATGCCATAGTGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: VRLATRKGGNSSQLL*VVGLEDEGPCHSES Trigger: GCTCTCACTATGGCATGGACCCTCATCCTCGAGCCCCACTACTCAGAGGAGCTGGGAAGAATTTCCACCCTTCCTAGTGGCAAGTCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000652076.1 ENST00000653356.1 ENST00000657362.1 |
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| CDS GCA 90 bp | CCAGCAGTCAGCTGCTTAAGGTTGTCTCTTCTGTCCACATCTTTGTaGCATTCTTTGGCTAGCAATGTAGGTGCCAGTCAGGGTCATCCT | + |
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Preference number: 5 (lower is better) Translates to: PAVSCLRLSLLSTSL*HSLASNVGASQGHP Trigger: AGGATGACCCTGACTGGCACCTACATTGCTAGCCAAAGAATGGCACAAAGATGTGGACAGAAGAGACAACCTTAAGCAGCTGACTGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS GCA 90 bp | CCTCAGCCACAGATTTGTTTTCTTTCCTTGGGACCCCAGGACAAATaGCATGATGATACTGTTGCAGGAGCCAGCAGTCAGCTGCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: PQPQICFLSLGPQDK*HDDTVAGASSQLLK Trigger: CTTAAGCAGCTGACTGCTGGCTCCTGCAACAGTATCATCATGGCATTTGTCCTGGGGTCCCAAGGAAAGAAAACAAATCTGTGGCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS GCA 90 bp | GCTCCTGCCGTCAGAATGGTCGGTCCAGGTTCCTTTAGTAGAACCTaGTACCACGTGCATATCTACATACACCCTTTGTCCTTGTGTTAC | + |
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Preference number: 5 (lower is better) Translates to: APAVRMVGPGSFSRT*YHVHIYIHPLSLCY Trigger: GTAACACAAGGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACTAAAGGAACCTGGACCGACCATTCTGACGGCAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652076.1 |
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| CDS GCA 90 bp | TCCTTGCCTGTAAACTGTGGTAGTGGGGAGGCCTGGCCTACTCACTaGACAAGACCGTCTTTAGGACAAAATAGGCTACTATGGATGAAA | + |
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Preference number: 5 (lower is better) Translates to: SLPVNCGSGEAWPTH*TRPSLGQNRLLWMK Trigger: TTTCATCCATAGTAGCCTATTTTGTCCTAAAGACGGTCTTGTGCAGTGAGTAGGCCAGGCCTCCCCACTACCACAGTTTACAGGCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS CCA 90 bp | GAAATATCACATTCCTTGCCTGTAAACTGTGGTAGTGGGGAGGCCTaGCCTACTCACTGCACAAGACCGTCTTTAGGACAAAATAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: EISHSLPVNCGSGEA*PTHCTRPSLGQNRL Trigger: TAGCCTATTTTGTCCTAAAGACGGTCTTGTGCAGTGAGTAGGCCAGGCCTCCCCACTACCACAGTTTACAGGCAAGGAATGTGATATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS GCA 90 bp | AGGACAAATGCCATGATGATACTGTTGCAGGAGCCAGCAGTCAGCTaGTTAAGGTTGTCTCTTCTGTCCACATCTTTGTGCCATTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: RTNAMMILLQEPAVS*LRLSLLSTSLCHSL Trigger: CAAAGAATGGCACAAAGATGTGGACAGAAGAGACAACCTTAAGCAGCTGACTGCTGGCTCCTGCAACAGTATCATCATGGCATTTGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS GCA 90 bp | ATTGGGCCCAGTGATGTGTACATCAATGGTTTGGCTTGCTGTTTATaGTACTTATTTACTCGAGCAGTCACTCTGGTGTGTTCCCATGGC | + |
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Preference number: 5 (lower is better) Translates to: IGPSDVYINGLACCL*YLFTRAVTLVCSHG Trigger: GCCATGGGAACACACCAGAGTGACTGCTCGAGTAAATAAGTAGCATAAACAGCAAGCCAAACCATTGATGTACACATCACTGGGCCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415448.1 ENST00000653356.1 ENST00000655209.1 |
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| CDS GCA 90 bp | TCAGAATGGTCGGTCCAGGTTCCTTTAGTAGAACCTGCTACCACGTaGATATCTACATACACCCTTTGTCCTTGTGTTACTGTGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: SEWSVQVPLVEPATT*ISTYTLCPCVTVEA Trigger: AGCTTCCACAGTAACACAAGGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACTAAAGGAACCTGGACCGACCATTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652076.1 |
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| CDS GCA 90 bp | CTAGAATGGTCGGTCCAGGTTCCTTTAGTAGAACCTGCTACCACGTaGATATCTACATACACCCTTTGTCCTTGTGTTACTGTGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: LEWSVQVPLVEPATT*ISTYTLCPCVTVEA Trigger: AGCTTCCACAGTAACACAAGGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACTAAAGGAACCTGGACCGACCATTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654239.1 |
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| CDS GCA 90 bp | GCAGTCACGTCAGTTGCCTTTGGTTCTTGTCTGACTGAGGAGAGATaGTCTATACGTGGTTTTGGTAATGACAGCATGTCTCTAACTCGA | + |
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Preference number: 5 (lower is better) Translates to: AVTSVAFGSCLTEER*SIRGFGNDSMSLTR Trigger: TCGAGTTAGAGACATGCTGTCATTACCAAAACCACGTATAGAGCATCTCTCCTCAGTCAGACAAGAACCAAAGGCAACTGACGTGACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654239.1 |
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| CDS GCA 90 bp | ACAGAATGGTCGGTCCAGGTTCCTTTAGTAGAACCTGCTACCACGTaGATATCTACATACACCCTTTGTCCTTGTGTTACTGTGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: TEWSVQVPLVEPATT*ISTYTLCPCVTVEA Trigger: AGCTTCCACAGTAACACAAGGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACTAAAGGAACCTGGACCGACCATTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654212.1 |
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| CDS GCA 90 bp | GTGGGTACTTACAGAATGGTCGGTCCAGGTTCCTTTAGTAGAACCTaGTACCACGTGCATATCTACATACACCCTTTGTCCTTGTGTTAC | + |
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Preference number: 5 (lower is better) Translates to: VGTYRMVGPGSFSRT*YHVHIYIHPLSLCY Trigger: GTAACACAAGGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACTAAAGGAACCTGGACCGACCATTCTGTAAGTACCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654212.1 |
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| CDS GCA 90 bp | GAAGAATGGTCGGTCCAGGTTCCTTTAGTAGAACCTGCTACCACGTaGATATCTACATACACCCTTTGTCCTTGTGTTACTGTGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: EEWSVQVPLVEPATT*ISTYTLCPCVTVEA Trigger: AGCTTCCACAGTAACACAAGGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACTAAAGGAACCTGGACCGACCATTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657362.1 |
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| CDS CCA 90 bp | CTACCACGTGCATATCTACATACACCCTTTGTCCTTGTGTTACTGTaGAAGCTGCTTTGTCAACTCAGTCTGTTCCTCAGCCACAGATTT | + |
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Preference number: 5 (lower is better) Translates to: LPRAYLHTPFVLVLL*KLLCQLSLFLSHRF Trigger: AAATCTGTGGCTGAGGAACAGACTGAGTTGACAAAGCAGCTTCCACAGTAACACAAGGACAAAGGGTGTATGTAGATATGCACGTGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS GCA 90 bp | ACACGATATACTAGAATGGTCGGTCCAGGTTCCTTTAGTAGAACCTaGTACCACGTGCATATCTACATACACCCTTTGTCCTTGTGTTAC | + |
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Preference number: 5 (lower is better) Translates to: TRYTRMVGPGSFSRT*YHVHIYIHPLSLCY Trigger: GTAACACAAGGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACTAAAGGAACCTGGACCGACCATTCTAGTATATCGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654239.1 |
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| CDS CCA 90 bp | CAAAGCTTCTCCTTGGAAGGCTTTTCTTTACACGATATACTAGAATaGTCGGTCCAGGTTCCTTTAGTAGAACCTGCTACCACGTGCATA | + |
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Preference number: 5 (lower is better) Translates to: QSFSLEGFSLHDILE*SVQVPLVEPATTCI Trigger: TATGCACGTGGTAGCAGGTTCTACTAAAGGAACCTGGACCGACCATTCTAGTATATCGTGTAAAGAAAAGCCTTCCAAGGAGAAGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654239.1 |
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| CDS GCA 90 bp | GTGCATATCTACATACACCCTTTGTCCTTGTGTTACTGTGGAAGCTaGTTTGTCAACTCAGTCTGTTCCTCAGCCACAGATTTGTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: VHIYIHPLSLCYCGS*FVNSVCSSATDLFS Trigger: AGAAAACAAATCTGTGGCTGAGGAACAGACTGAGTTGACAAAGCAGCTTCCACAGTAACACAAGGACAAAGGGTGTATGTAGATATGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS CCA 90 bp | TGGGATTTCATAGTATTGGGCCCAGTGATGTGTACATCAATGGTTTaGCTTGCTGTTTATGCTACTTATTTACTCGAGCAGTCACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: WDFIVLGPVMCTSMV*LAVYATYLLEQSLW Trigger: CCAGAGTGACTGCTCGAGTAAATAAGTAGCATAAACAGCAAGCCAAACCATTGATGTACACATCACTGGGCCCAATACTATGAAATCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415448.1 ENST00000653356.1 ENST00000655209.1 |
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| CDS GCA 72 bp | TTCAGAGCTGTCCTGGGCCATACACAGCCCGCGGGCTaGAGGTTAGACAAGCTTGGGCTACATGGTACCAGT | + |
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Preference number: 6 (lower is better) Translates to: FRAVLGHTQPAG*RLDKLGLHGTS Trigger: ACTGGTACCATGTAGCCCAAGCTTGTCTAACCTGCAGCCCGCGGGCTGTGTATGGCCCAGGACAGCTCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS TCA 72 bp | CTGCCCTGTTTGCCTGGTGGCACTCCGCTCTCACAGTaGGACTTGCCACTAGGAAGGGTGGAAATTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LPCLPGGTPLSQ*DLPLGRVEILP Trigger: GGGAAGAATTTCCACCCTTCCTAGTGGCAAGTCTCACTGTGAGAGCGGAGTGCCACCAGGCAAACAGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS TCA 72 bp | GCCACTAGGAAGGGTGGAAATTCTTCCCAGCTCCTCTaGGTAGTGGGGCTCGAGGATGAGGGTCCATGCCAT | + |
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Preference number: 6 (lower is better) Translates to: ATRKGGNSSQLL*VVGLEDEGPCH Trigger: ATGGCATGGACCCTCATCCTCGAGCCCCACTACTCAGAGGAGCTGGGAAGAATTTCCACCCTTCCTAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS GCA 72 bp | CTGCCGTCCTTCCAAGGAGAGAGCAGTCACGTCAGTTaGCTTTGGTTCTTGTCTGAAGAATGGTCGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LPSFQGESSHVS*LWFLSEEWSVQ Trigger: CTGGACCGACCATTCTTCAGACAAGAACCAAAGGCAACTGACGTGACTGCTCTCTCCTTGGAAGGACGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657362.1 |
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| CDS CCA 72 bp | CATTCCTTGCCTGTAAACTGTGGTAGTGGGGAGGCCTaGCCTACTCACTGCACAAGACCGTCTTTAGGACAA | + |
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Preference number: 6 (lower is better) Translates to: HSLPVNCGSGEA*PTHCTRPSLGQ Trigger: TTGTCCTAAAGACGGTCTTGTGCAGTGAGTAGGCCAGGCCTCCCCACTACCACAGTTTACAGGCAAGGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS CAA 72 bp | CCTTGGGACCCCAGGACAAATGCCATGATGATACTGTaGCAGGAGCCAGCAGTCAGCTGCTTAAGGTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: PWDPRTNAMMIL*QEPAVSCLRLS Trigger: AGACAACCTTAAGCAGCTGACTGCTGGCTCCTGCAACAGTATCATCATGGCATTTGTCCTGGGGTCCCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS CCA 72 bp | TCCTTCCAAGGAGAGAGCAGTCACGTCAGTTGCCTTTaGTTCTTGTCTGAAGAATGGTCGGTCCAGGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SFQGESSHVSCL*FLSEEWSVQVP Trigger: AGGAACCTGGACCGACCATTCTTCAGACAAGAACCAAAGGCAACTGACGTGACTGCTCTCTCCTTGGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657362.1 |
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| CDS CAA 90 bp | GAGCCAGCAGTCAGCTGCTTAAGGTTGTCTCTTCTGTCCACATCTTaGTGCCATTCTTTGGCTAGCAATGTAGGTGCCAGTCAGGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: EPAVSCLRLSLLSTS*CHSLASNVGASQGH Trigger: ATGACCCTGACTGGCACCTACATTGCTAGCCAAAGAATGGCACAAAGATGTGGACAGAAGAGACAACCTTAAGCAGCTGACTGCTGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS GCA 72 bp | GCCATGATGATACTGTTGCAGGAGCCAGCAGTCAGCTaGTTAAGGTTGTCTCTTCTGTCCACATCTTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: AMMILLQEPAVS*LRLSLLSTSLC Trigger: GCACAAAGATGTGGACAGAAGAGACAACCTTAAGCAGCTGACTGCTGGCTCCTGCAACAGTATCATCATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS GCA 72 bp | CAGATTTGTTTTCTTTCCTTGGGACCCCAGGACAAATaGCATGATGATACTGTTGCAGGAGCCAGCAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: QICFLSLGPQDK*HDDTVAGASSQ Trigger: CTGACTGCTGGCTCCTGCAACAGTATCATCATGGCATTTGTCCTGGGGTCCCAAGGAAAGAAAACAAATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS GCA 72 bp | GTGAGAATGGTCGGTCCAGGTTCCTTTAGTAGAACCTaGTACCACGTGCATATCTACATACACCCTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: VRMVGPGSFSRT*YHVHIYIHPLS Trigger: GGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACTAAAGGAACCTGGACCGACCATTCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415448.1 ENST00000653356.1 ENST00000655209.1 |
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| CDS GCA 72 bp | GTCAGAATGGTCGGTCCAGGTTCCTTTAGTAGAACCTaGTACCACGTGCATATCTACATACACCCTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: VRMVGPGSFSRT*YHVHIYIHPLS Trigger: GGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACTAAAGGAACCTGGACCGACCATTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652076.1 |
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| CDS GCA 72 bp | ACTAGAATGGTCGGTCCAGGTTCCTTTAGTAGAACCTaGTACCACGTGCATATCTACATACACCCTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: TRMVGPGSFSRT*YHVHIYIHPLS Trigger: GGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACTAAAGGAACCTGGACCGACCATTCTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654239.1 |
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| CDS GCA 72 bp | TACAGAATGGTCGGTCCAGGTTCCTTTAGTAGAACCTaGTACCACGTGCATATCTACATACACCCTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: YRMVGPGSFSRT*YHVHIYIHPLS Trigger: GGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACTAAAGGAACCTGGACCGACCATTCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654212.1 |
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| CDS CCA 72 bp | TGCACAAGACCGTCTTTAGGACAAAATAGGCTACTATaGATGAAAGGGCCACATCAGGGGTGTCCAGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: CTRPSLGQNRLL*MKGPHQGCPVF Trigger: AAAGACTGGACACCCCTGATGTGGCCCTTTCATCCATAGTAGCCTATTTTGTCCTAAAGACGGTCTTGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS CAA 72 bp | GTCAGCTGCTTAAGGTTGTCTCTTCTGTCCACATCTTaGTGCCATTCTTTGGCTAGCAATGTAGGTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: VSCLRLSLLSTS*CHSLASNVGAS Trigger: ACTGGCACCTACATTGCTAGCCAAAGAATGGCACAAAGATGTGGACAGAAGAGACAACCTTAAGCAGCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS CAA 90 bp | AGTAGAACCTGCTACCACGTGCATATCTACATACACCCTTTGTCCTaGTGTTACTGTGGAAGCTGCTTTGTCAACTCAGTCTGTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SRTCYHVHIYIHPLS*CYCGSCFVNSVCSS Trigger: TGAGGAACAGACTGAGTTGACAAAGCAGCTTCCACAGTAACACAAGGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS GCA 72 bp | TCGGTCCAGGTTCCTTTAGTAGAACCTGCTACCACGTaGATATCTACATACACCCTTTGTCCTTGTGTTACT | + |
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Preference number: 6 (lower is better) Translates to: SVQVPLVEPATT*ISTYTLCPCVT Trigger: AGTAACACAAGGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACTAAAGGAACCTGGACCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS CCA 72 bp | GCATATCTACATACACCCTTTGTCCTTGTGTTACTGTaGAAGCTGCTTTGTCAACTCAGTCTGTTCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: AYLHTPFVLVLL*KLLCQLSLFLS Trigger: GCTGAGGAACAGACTGAGTTGACAAAGCAGCTTCCACAGTAACACAAGGACAAAGGGTGTATGTAGATATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS CAA 72 bp | TACACCCTTTGTCCTTGTGTTACTGTGGAAGCTGCTTaGTCAACTCAGTCTGTTCCTCAGCCACAGATTTGT | + |
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Preference number: 6 (lower is better) Translates to: YTLCPCVTVEAA*STQSVPQPQIC Trigger: ACAAATCTGTGGCTGAGGAACAGACTGAGTTGACAAAGCAGCTTCCACAGTAACACAAGGACAAAGGGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS CAA 72 bp | TGCTACCACGTGCATATCTACATACACCCTTTGTCCTaGTGTTACTGTGGAAGCTGCTTTGTCAACTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: CYHVHIYIHPLS*CYCGSCFVNSV Trigger: GACTGAGTTGACAAAGCAGCTTCCACAGTAACACAAGGACAAAGGGTGTATGTAGATATGCACGTGGTAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS CAA 72 bp | AGAACCTGCTACCACGTGCATATCTACATACACCCTTaGTCCTTGTGTTACTGTGGAAGCTGCTTTGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: RTCYHVHIYIHP*SLCYCGSCFVN Trigger: GTTGACAAAGCAGCTTCCACAGTAACACAAGGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS CAA 90 bp | AGCTGCTTAAGGTTGTCTCTTCTGTCCACATCTTTGTGCCATTCTTaGGCTAGCAATGTAGGTGCCAGTCAGGGTCATCCTATGAAATAT | + |
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Preference number: 6 (lower is better) Translates to: SCLRLSLLSTSLCHS*ASNVGASQGHPMKY Trigger: ATATTTCATAGGATGACCCTGACTGGCACCTACATTGCTAGCCAAAGAATGGCACAAAGATGTGGACAGAAGAGACAACCTTAAGCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS CAA 90 bp | TCCTTTAGTAGAACCTGCTACCACGTGCATATCTACATACACCCTTaGTCCTTGTGTTACTGTGGAAGCTGCTTTGTCAACTCAGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: SFSRTCYHVHIYIHP*SLCYCGSCFVNSVC Trigger: ACAGACTGAGTTGACAAAGCAGCTTCCACAGTAACACAAGGACAAAGGGTGTATGTAGATATGCACGTGGTAGCAGGTTCTACTAAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS GCA 72 bp | TCAGTTGCCTTTGGTTCTTGTCTGACTGAGGAGAGATaGTCTATACGTGGTTTTGGTAATGACAGCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: SVAFGSCLTEER*SIRGFGNDSMS Trigger: AGACATGCTGTCATTACCAAAACCACGTATAGAGCATCTCTCCTCAGTCAGACAAGAACCAAAGGCAACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654239.1 |
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| CDS CCA 72 bp | TCCTTGGAAGGCTTTTCTTTACACGATATACTAGAATaGTCGGTCCAGGTTCCTTTAGTAGAACCTGCTACC | + |
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Preference number: 6 (lower is better) Translates to: SLEGFSLHDILE*SVQVPLVEPAT Trigger: GGTAGCAGGTTCTACTAAAGGAACCTGGACCGACCATTCTAGTATATCGTGTAAAGAAAAGCCTTCCAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654239.1 |
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| CDS CAA 90 bp | GTGGGATTTCATAGTATTGGGCCCAGTGATGTGTACATCAATGGTTaGGCTTGCTGTTTATGCTACTTATTTACTCGAGCAGTCACTCTG | + |
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Preference number: 6 (lower is better) Translates to: VGFHSIGPSDVYING*ACCLCYLFTRAVTL Trigger: CAGAGTGACTGCTCGAGTAAATAAGTAGCATAAACAGCAAGCCAAACCATTGATGTACACATCACTGGGCCCAATACTATGAAATCCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415448.1 ENST00000653356.1 ENST00000655209.1 |
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| CDS CAA 72 bp | CAGCCCATGCTAAACATCACCCTGGTTCTTGGGTCTTaGTTCAGCATCAGTAGCAATATCATGACAATAACT | + |
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Preference number: 6 (lower is better) Translates to: QPMLNITLVLGS*FSISSNIMTIT Trigger: AGTTATTGTCATGATATTGCTACTGATGCTGAACAAAGACCCAAGAACCAGGGTGATGTTTAGCATGGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655209.1 |
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| CDS CAA 72 bp | ATAGAACTACCACACTCCTCTCTGCCTTATAAACCTTaGCCTACCAACAATACAAGCTCAGATTCCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: IELPHSSLPYKP*PTNNTSSDSFP Trigger: AGGGAAGGAATCTGAGCTTGTATTGTTGGTAGGCAAAGGTTTATAAGGCAGAGAGGAGTGTGGTAGTTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654212.1 |
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| CDS CAA 90 bp | ATATCTACATACACCCTTTGTCCTTGTGTTACTGTGGAAGCTGCTTaGTCAACTCAGTCTGTTCCTCAGCCACAGATTTGTTTTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: ISTYTLCPCVTVEAA*STQSVPQPQICFLS Trigger: GGAAAGAAAACAAATCTGTGGCTGAGGAACAGACTGAGTTGACAAAGCAGCTTCCACAGTAACACAAGGACAAAGGGTGTATGTAGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000415448.1 ENST00000652076.1 ENST00000653356.1 ENST00000654212.1 ENST00000654239.1 ENST00000655209.1 ENST00000657362.1 |
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| CDS CAA 90 bp | ACACATCTAATAGAACTACCACACTCCTCTCTGCCTTATAAACCTTaGCCTACCAACAATACAAGCTCAGATTCCTTCCCTGAGTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: THLIELPHSSLPYKP*PTNNTSSDSFPECS Trigger: ACTACACTCAGGGAAGGAATCTGAGCTTGTATTGTTGGTAGGCAAAGGTTTATAAGGCAGAGAGGAGTGTGGTAGTTCTATTAGATGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654212.1 |
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| CDS GCA 72 bp | AGTGATGTGTACATCAATGGTTTGGCTTGCTGTTTATaGTACTTATTTACTCGAGCAGTCACTCTGGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: SDVYINGLACCL*YLFTRAVTLVC Trigger: ACACACCAGAGTGACTGCTCGAGTAAATAAGTAGCATAAACAGCAAGCCAAACCATTGATGTACACATCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415448.1 ENST00000653356.1 ENST00000655209.1 |
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| CDS CCA 72 bp | ATAGTATTGGGCCCAGTGATGTGTACATCAATGGTTTaGCTTGCTGTTTATGCTACTTATTTACTCGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: IVLGPVMCTSMV*LAVYATYLLEQ Trigger: CTGCTCGAGTAAATAAGTAGCATAAACAGCAAGCCAAACCATTGATGTACACATCACTGGGCCCAATACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415448.1 ENST00000653356.1 ENST00000655209.1 |
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| CDS CAA 72 bp | CATAGTATTGGGCCCAGTGATGTGTACATCAATGGTTaGGCTTGCTGTTTATGCTACTTATTTACTCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: HSIGPSDVYING*ACCLCYLFTRA Trigger: TGCTCGAGTAAATAAGTAGCATAAACAGCAAGCCAAACCATTGATGTACACATCACTGGGCCCAATACTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415448.1 ENST00000653356.1 ENST00000655209.1 |
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| CDS CAA 90 bp | GATCTCAATGTAATTCATTACAGAAGTGCTTCCCAAAGCTTCTCCTaGGAAGGCTTTTCTTTACACGATATACTAGAATGGTCGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: DLNVIHYRSASQSFS*EGFSLHDILEWSVQ Trigger: CTGGACCGACCATTCTAGTATATCGTGTAAAGAAAAGCCTTCCAAGGAGAAGCTTTGGGAAGCACTTCTGTAATGAATTACATTGAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654239.1 |
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| CDS CAA 72 bp | GTAATTCATTACAGAAGTGCTTCCCAAAGCTTCTCCTaGGAAGGCTTTTCTTTACACGATATACTAGAATGG | + |
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Preference number: 6 (lower is better) Translates to: VIHYRSASQSFS*EGFSLHDILEW Trigger: CCATTCTAGTATATCGTGTAAAGAAAAGCCTTCCAAGGAGAAGCTTTGGGAAGCACTTCTGTAATGAATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654239.1 |
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