Pregenerated sensors for LINC01885 (Homo sapiens)
Ensembl gene IDs: ENSG00000237880Ensembl transcript IDs: ENST00000414300.2, ENST00000654481.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CACACCACCCACGCTGCCCAGATGGCAAAATGCTTCAGCCTTCACTaGTGTCTTACAGTGCTGCAGAGGCATGTGTCTGTGCTGGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: HTTHAAQMAKCFSLH*CLTVLQRHVSVLAG Trigger: GCCGGCCAGCACAGACACATGCCTCTGCAGCACTGTAAGACATCAGTGAAGGCTGAAGCATTTTGCCATCTGGGCAGCGTGGGTGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS GCA 90 bp | CTGCCCAGATGGCAAAATGCTTCAGCCTTCACTGATGTCTTACAGTaGTGCAGAGGCATGTGTCTGTGCTGGCCGGCCTGGGCCTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: LPRWQNASAFTDVLQ*CRGMCLCWPAWAWQ Trigger: TTGCCAGGCCCAGGCCGGCCAGCACAGACACATGCCTCTGCAGCACTGTAAGACATCAGTGAAGGCTGAAGCATTTTGCCATCTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS CCA 90 bp | GATGTCTTACAGTGCTGCAGAGGCATGTGTCTGTGCTGGCCGGCCTaGGCCTGGCAAATGATGTGCCGTCTTCTTTCTGTGCACAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: DVLQCCRGMCLCWPA*AWQMMCRLLSVHSS Trigger: GCTGCTGTGCACAGAAAGAAGACGGCACATCATTTGCCAGGCCCAGGCCGGCCAGCACAGACACATGCCTCTGCAGCACTGTAAGACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS GCA 90 bp | CCCAGATGGCAAAATGCTTCAGCCTTCACTGATGTCTTACAGTGCTaGAGAGGCATGTGTCTGTGCTGGCCGGCCTGGGCCTGGCAAATG | + |
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Preference number: 5 (lower is better) Translates to: PRWQNASAFTDVLQC*RGMCLCWPAWAWQM Trigger: CATTTGCCAGGCCCAGGCCGGCCAGCACAGACACATGCCTCTGCAGCACTGTAAGACATCAGTGAAGGCTGAAGCATTTTGCCATCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS CCA 90 bp | GCCTTCACTGATGTCTTACAGTGCTGCAGAGGCATGTGTCTGTGCTaGCCGGCCTGGGCCTGGCAAATGATGTGCCGTCTTCTTTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: AFTDVLQCCRGMCLC*PAWAWQMMCRLLSV Trigger: CACAGAAAGAAGACGGCACATCATTTGCCAGGCCCAGGCCGGCCAGCACAGACACATGCCTCTGCAGCACTGTAAGACATCAGTGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS GCA 90 bp | AGAGGCATGTGTCTGTGCTGGCCGGCCTGGGCCTGGCAAATGATGTaGCGTCTTCTTTCTGTGCACAGCAGCTCAAAAACCATGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: RGMCLCWPAWAWQMM*RLLSVHSSSKTMMR Trigger: CCTCATCATGGTTTTTGAGCTGCTGTGCACAGAAAGAAGACGGCACATCATTTGCCAGGCCCAGGCCGGCCAGCACAGACACATGCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS GCA 90 bp | TCAGCCTTCACTGATGTCTTACAGTGCTGCAGAGGCATGTGTCTGTaGTGGCCGGCCTGGGCCTGGCAAATGATGTGCCGTCTTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SAFTDVLQCCRGMCL*WPAWAWQMMCRLLS Trigger: AGAAAGAAGACGGCACATCATTTGCCAGGCCCAGGCCGGCCAGCACAGACACATGCCTCTGCAGCACTGTAAGACATCAGTGAAGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS CCA 90 bp | TTACAGTGCTGCAGAGGCATGTGTCTGTGCTGGCCGGCCTGGGCCTaGCAAATGATGTGCCGTCTTCTTTCTGTGCACAGCAGCTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: LQCCRGMCLCWPAWA*QMMCRLLSVHSSSK Trigger: TTTTGAGCTGCTGTGCACAGAAAGAAGACGGCACATCATTTGCCAGGCCCAGGCCGGCCAGCACAGACACATGCCTCTGCAGCACTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS TCA 90 bp | CATGATGAGGCTTCGTCTGCGAATCCTCTGCCATGGGTTTTCCTTTaGGAAGTGCTCAGCATGCACCATCCATGCTGTTGGGTCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: HDEASSANPLPWVFL*EVLSMHHPCCWVLS Trigger: GGAGAGGACCCAACAGCATGGATGGTGCATGCTGAGCACTTCTCAAAGGAAAACCCATGGCAGAGGATTCGCAGACGAAGCCTCATCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654481.1 |
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| CDS GCA 90 bp | AGGCTTCGTCTGCGAATCCTCTGCCATGGGTTTTCCTTTGAGAAGTaGTCAGCATGCACCATCCATGCTGTTGGGTCCTCTCCTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: RLRLRILCHGFSFEK*SACTIHAVGSSPLS Trigger: AGAGAGAGGAGAGGACCCAACAGCATGGATGGTGCATGCTGAGCACTTCTCAAAGGAAAACCCATGGCAGAGGATTCGCAGACGAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654481.1 |
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| CDS CCA 90 bp | GGATTTATCACCAGCCAGTCCTCCTCAAGGTTCAGGAAAGCTGCCTaGAGCAGAAGGAGTCTCAAAATTCACGGGCACCACTTGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: GFITSQSSSRFRKAA*SRRSLKIHGHHLHC Trigger: GCAGTGCAAGTGGTGCCCGTGAATTTTGAGACTCCTTCTGCTCCAGGCAGCTTTCCTGAACCTTGAGGAGGACTGGCTGGTGATAAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414300.2 |
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| CDS TCA 90 bp | AACCATGATGAGGCTTCGTCGAATCCTCTGCCATGGGTTTTCCTTTaGGAAGTGCTCAGCATGCACCATCCATGCTGTTGGGTCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: NHDEASSNPLPWVFL*EVLSMHHPCCWVLS Trigger: GGAGAGGACCCAACAGCATGGATGGTGCATGCTGAGCACTTCTCAAAGGAAAACCCATGGCAGAGGATTCGACGAAGCCTCATCATGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414300.2 |
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| CDS GCA 90 bp | ATGAGGCTTCGTCGAATCCTCTGCCATGGGTTTTCCTTTGAGAAGTaGTCAGCATGCACCATCCATGCTGTTGGGTCCTCTCCTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: MRLRRILCHGFSFEK*SACTIHAVGSSPLS Trigger: AGAGAGAGGAGAGGACCCAACAGCATGGATGGTGCATGCTGAGCACTTCTCAAAGGAAAACCCATGGCAGAGGATTCGACGAAGCCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414300.2 |
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| CDS CCA 90 bp | ACCATCCATGCTGTTGGGTCCTCTCCTCTCTCTTCCGGATACCCTTaGACCATCTCAATCATCTGCACTCCTAAGATACAGGCACAGTCT | + |
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Preference number: 5 (lower is better) Translates to: TIHAVGSSPLSSGYP*TISIICTPKIQAQS Trigger: AGACTGTGCCTGTATCTTAGGAGTGCAGATGATTGAGATGGTCCAAGGGTATCCGGAAGAGAGAGGAGAGGACCCAACAGCATGGATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS GCA 90 bp | CCATCTCAATCATCTGCACTCCTAAGATACAGGCACAGTCTGGGTTaGAGTGAAGGTTCTGAGCAGGGTAGTGGCATTTTCCCACTCCTT | + |
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Preference number: 5 (lower is better) Translates to: PSQSSALLRYRHSLG*SEGSEQGSGIFPLL Trigger: AAGGAGTGGGAAAATGCCACTACCCTGCTCAGAACCTTCACTGCAACCCAGACTGTGCCTGTATCTTAGGAGTGCAGATGATTGAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS TCA 90 bp | GATTCTATAGTTGTGGCAGGGAATGGATACCACAGAGGGAGAAGCTaGAGGTACAGAGCTACCAAAGGGGATTCCACTTCTCAACAATAT | + |
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Preference number: 5 (lower is better) Translates to: DSIVVAGNGYHRGRS*RYRATKGDSTSQQY Trigger: ATATTGTTGAGAAGTGGAATCCCCTTTGGTAGCTCTGTACCTTCAGCTTCTCCCTCTGTGGTATCCATTCCCTGCCACAACTATAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654481.1 |
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| CDS TCA 90 bp | TCAGATGCAATTTTCTCCATGAGGACTTCCAAGGTCAAACCTTGGTaGCAGGATCATTCTTACACTGAGCCTCAGCAACAAGCAATATCG | + |
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Preference number: 5 (lower is better) Translates to: SDAIFSMRTSKVKPW*QDHSYTEPQQQAIS Trigger: CGATATTGCTTGTTGCTGAGGCTCAGTGTAAGAATGATCCTGTCACCAAGGTTTGACCTTGGAAGTCCTCATGGAGAAAATTGCATCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS GCA 90 bp | ATTTGTTTGAATTCAGAGGTTATCCTTGGATATTGGAAAAGCCCTTaGTTATGGCTCAGAGAGAAAAAGTTATGCAAATCAGGACGCTGT | + |
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Preference number: 5 (lower is better) Translates to: ICLNSEVILGYWKSP*LWLREKKLCKSGRC Trigger: ACAGCGTCCTGATTTGCATAACTTTTTCTCTCTGAGCCATAAGCAAGGGCTTTTCCAATATCCAAGGATAACCTCTGAATTCAAACAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS CCA 72 bp | TGCAGAGGCATGTGTCTGTGCTGGCCGGCCTGGGCCTaGCAAATGATGTGCCGTCTTCTTTCTGTGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: CRGMCLCWPAWA*QMMCRLLSVHS Trigger: GCTGTGCACAGAAAGAAGACGGCACATCATTTGCCAGGCCCAGGCCGGCCAGCACAGACACATGCCTCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS GCA 72 bp | ACTGATGTCTTACAGTGCTGCAGAGGCATGTGTCTGTaGTGGCCGGCCTGGGCCTGGCAAATGATGTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: TDVLQCCRGMCL*WPAWAWQMMCR Trigger: ACGGCACATCATTTGCCAGGCCCAGGCCGGCCAGCACAGACACATGCCTCTGCAGCACTGTAAGACATCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS GCA 72 bp | GGAGCAGAAGGAGTCTCAAAATTCACGGGCACCACTTaGACTGCAGCTGAGGATCCCCAGACAGCAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: GAEGVSKFTGTT*TAAEDPQTAAS Trigger: GGATGCTGCTGTCTGGGGATCCTCAGCTGCAGTGCAAGTGGTGCCCGTGAATTTTGAGACTCCTTCTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414300.2 |
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| CDS GCA 72 bp | TGTCTGTGCTGGCCGGCCTGGGCCTGGCAAATGATGTaGCGTCTTCTTTCTGTGCACAGCAGCTCAAAAACC | + |
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Preference number: 6 (lower is better) Translates to: CLCWPAWAWQMM*RLLSVHSSSKT Trigger: GGTTTTTGAGCTGCTGTGCACAGAAAGAAGACGGCACATCATTTGCCAGGCCCAGGCCGGCCAGCACAGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS GCA 72 bp | CAAAATGCTTCAGCCTTCACTGATGTCTTACAGTGCTaGAGAGGCATGTGTCTGTGCTGGCCGGCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: QNASAFTDVLQC*RGMCLCWPAWA Trigger: GGCCCAGGCCGGCCAGCACAGACACATGCCTCTGCAGCACTGTAAGACATCAGTGAAGGCTGAAGCATTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS GCA 72 bp | TGGCAAAATGCTTCAGCCTTCACTGATGTCTTACAGTaGTGCAGAGGCATGTGTCTGTGCTGGCCGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: WQNASAFTDVLQ*CRGMCLCWPAW Trigger: CCAGGCCGGCCAGCACAGACACATGCCTCTGCAGCACTGTAAGACATCAGTGAAGGCTGAAGCATTTTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS CCA 72 bp | ACCAGCCAGTCCTCCTCAAGGTTCAGGAAAGCTGCCTaGAGCAGAAGGAGTCTCAAAATTCACGGGCACCAC | + |
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Preference number: 6 (lower is better) Translates to: TSQSSSRFRKAA*SRRSLKIHGHH Trigger: GTGGTGCCCGTGAATTTTGAGACTCCTTCTGCTCCAGGCAGCTTTCCTGAACCTTGAGGAGGACTGGCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414300.2 |
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| CDS TCA 72 bp | GAGGCTTCGTCGAATCCTCTGCCATGGGTTTTCCTTTaGGAAGTGCTCAGCATGCACCATCCATGCTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: EASSNPLPWVFL*EVLSMHHPCCW Trigger: CCAACAGCATGGATGGTGCATGCTGAGCACTTCTCAAAGGAAAACCCATGGCAGAGGATTCGACGAAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414300.2 |
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| CDS TCA 72 bp | GCTTCGTCTGCGAATCCTCTGCCATGGGTTTTCCTTTaGGAAGTGCTCAGCATGCACCATCCATGCTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: ASSANPLPWVFL*EVLSMHHPCCW Trigger: CCAACAGCATGGATGGTGCATGCTGAGCACTTCTCAAAGGAAAACCCATGGCAGAGGATTCGCAGACGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654481.1 |
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| CDS GCA 72 bp | TATCACCAGCCAGTCCTCCTCAAGGTTCAGGAAAGCTaGCTGGAGCAGAAGGAGTCTCAAAATTCACGGGCA | + |
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Preference number: 6 (lower is better) Translates to: YHQPVLLKVQES*LEQKESQNSRA Trigger: TGCCCGTGAATTTTGAGACTCCTTCTGCTCCAGGCAGCTTTCCTGAACCTTGAGGAGGACTGGCTGGTGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414300.2 |
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| CDS GCA 72 bp | CGTCGAATCCTCTGCCATGGGTTTTCCTTTGAGAAGTaGTCAGCATGCACCATCCATGCTGTTGGGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: RRILCHGFSFEK*SACTIHAVGSS Trigger: AGAGGACCCAACAGCATGGATGGTGCATGCTGAGCACTTCTCAAAGGAAAACCCATGGCAGAGGATTCGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414300.2 |
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| CDS GCA 72 bp | CTGCGAATCCTCTGCCATGGGTTTTCCTTTGAGAAGTaGTCAGCATGCACCATCCATGCTGTTGGGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LRILCHGFSFEK*SACTIHAVGSS Trigger: AGAGGACCCAACAGCATGGATGGTGCATGCTGAGCACTTCTCAAAGGAAAACCCATGGCAGAGGATTCGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654481.1 |
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| CDS CAA 72 bp | GGCTTCGTCTGCGAATCCTCTGCCATGGGTTTTCCTTaGAGAAGTGCTCAGCATGCACCATCCATGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: GFVCESSAMGFP*RSAQHAPSMLL Trigger: CAACAGCATGGATGGTGCATGCTGAGCACTTCTCAAAGGAAAACCCATGGCAGAGGATTCGCAGACGAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654481.1 |
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| CDS CAA 72 bp | GAGACTCAGTGTTTTTGTGAGTTACCCATGGTCATGTaGCTAAACCGTGGCAGACCAGGACTGGGATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ETQCFCELPMVM*LNRGRPGLGSR Trigger: CCTGGATCCCAGTCCTGGTCTGCCACGGTTTAGCAACATGACCATGGGTAACTCACAAAAACACTGAGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS CCA 72 bp | GAACCAGATTGCAGATTCTATAGTTGTGGCAGGGAATaGATACCACAGAGGGAGAAGCTGAAGGTACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: EPDCRFYSCGRE*IPQREKLKVQS Trigger: GCTCTGTACCTTCAGCTTCTCCCTCTGTGGTATCCATTCCCTGCCACAACTATAGAATCTGCAATCTGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654481.1 |
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| CDS CAA 90 bp | TATCACTCCAAGGGCTTACATAGTCTCTGGCTGGAATCAGGCACTTaGTCAGATGAGCGAAGAAAGGTGGTTGATTTGCTTTCTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: YHSKGLHSLWLESGT*SDERRKVVDLLSLF Trigger: GAAGAGAGAAAGCAAATCAACCACCTTTCTTCGCTCATCTGACAAAGTGCCTGATTCCAGCCAGAGACTATGTAAGCCCTTGGAGTGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414300.2 |
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| CDS CAA 72 bp | AAGGGCTTACATAGTCTCTGGCTGGAATCAGGCACTTaGTCAGATGAGCGAAGAAAGGTGGTTGATTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: KGLHSLWLESGT*SDERRKVVDLL Trigger: AAGCAAATCAACCACCTTTCTTCGCTCATCTGACAAAGTGCCTGATTCCAGCCAGAGACTATGTAAGCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414300.2 |
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| CDS CAA 90 bp | GATTTGTTTGAATTCAGAGGTTATCCTTGGATATTGGAAAAGCCCTaGCTTATGGCTCAGAGAGAAAAAGTTATGCAAATCAGGACGCTG | + |
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Preference number: 6 (lower is better) Translates to: DLFEFRGYPWILEKP*LMAQREKVMQIRTL Trigger: CAGCGTCCTGATTTGCATAACTTTTTCTCTCTGAGCCATAAGCAAGGGCTTTTCCAATATCCAAGGATAACCTCTGAATTCAAACAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS GCA 72 bp | AATTCAGAGGTTATCCTTGGATATTGGAAAAGCCCTTaGTTATGGCTCAGAGAGAAAAAGTTATGCAAATCA | + |
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Preference number: 6 (lower is better) Translates to: NSEVILGYWKSP*LWLREKKLCKS Trigger: TGATTTGCATAACTTTTTCTCTCTGAGCCATAAGCAAGGGCTTTTCCAATATCCAAGGATAACCTCTGAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS GCA 72 bp | AAACTGCTGTATTATATGTATAAGCCACTTCCCTTTTaGATGGCGTGGCTCTTAAAAGAAGAGCACTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: KLLYYMYKPLPF*MAWLLKEEHFK Trigger: TTTAAAGTGCTCTTCTTTTAAGAGCCACGCCATGCAAAAGGGAAGTGGCTTATACATATAATACAGCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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| CDS CAA 90 bp | ATTTACCATCAGCAACATATGAGAATTCTTTGTGTAGGGGAAACGTaGAAATCAATGTGTTATTACAAGGGGTTGAATTGCAGTAACCCA | + |
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Preference number: 6 (lower is better) Translates to: IYHQQHMRILCVGET*KSMCYYKGLNCSNP Trigger: TGGGTTACTGCAATTCAACCCCTTGTAATAACACATTGATTTCAACGTTTCCCCTACACAAAGAATTCTCATATGTTGCTGATGGTAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000414300.2 ENST00000654481.1 |
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