Pregenerated sensors for LINC01881 (Homo sapiens)

Ensembl gene IDs: ENSG00000220804

Ensembl transcript IDs: ENST00000682139.1, ENST00000682782.1, ENST00000683938.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 72 bp	AGCTTCCTTCGCTTTCGGTGCCGTATAAGTCGCAGATaGTGGGAACCAGCTTTCTCACTGTTGAAGTGGGAG	+
Preference number: 6 (lower is better) Translates to: SFLRFRCRISRR*WEPAFSLLKWE Trigger: CTCCCACTTCAACAGTGAGAAAGCTGGTTCCCACCATCTGCGACTTATACGGCACCGAAAGCGAAGGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000682139.1
CDS CCA 72 bp	TTCCTTCGCTTTCGGTGCCGTATAAGTCGCAGATGGTaGGAACCAGCTTTCTCACTGTTGAAGTGGGAGGTT	+
Preference number: 6 (lower is better) Translates to: FLRFRCRISRRW*EPAFSLLKWEV Trigger: AACCTCCCACTTCAACAGTGAGAAAGCTGGTTCCCACCATCTGCGACTTATACGGCACCGAAAGCGAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000682139.1
CDS CCA 72 bp	AGCACAGCTTGGAAGGCCTCAGGAAATCTACAATCATaGCGGAAGACAAAGAGGAAGCAAGCCAGCTTCTTC	+
Preference number: 6 (lower is better) Translates to: STAWKASGNLQS*RKTKRKQASFF Trigger: GAAGAAGCTGGCTTGCTTCCTCTTTGTCTTCCGCCATGATTGTAGATTTCCTGAGGCCTTCCAAGCTGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000682139.1 ENST00000683938.1
CDS CCA 72 bp	CAGCACATAGGAGTTCTGCATTGGTTTGGTCTGCATTaGTTTGGTAGTTCAGCACAGCTTGGAAGGCCTCAG	+
Preference number: 6 (lower is better) Translates to: QHIGVLHWFGLH*FGSSAQLGRPQ Trigger: CTGAGGCCTTCCAAGCTGTGCTGAACTACCAAACCAATGCAGACCAAACCAATGCAGAACTCCTATGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683938.1
CDS CAA 72 bp	GGTTTGGTCTGCATTGGTTTGGTAGTTCAGCACAGCTaGGAAGGCCTCAGGAAATCTACAATCATGGCGGAA	+
Preference number: 6 (lower is better) Translates to: GLVCIGLVVQHS*EGLRKSTIMAE Trigger: TTCCGCCATGATTGTAGATTTCCTGAGGCCTTCCAAGCTGTGCTGAACTACCAAACCAATGCAGACCAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683938.1
CDS CAA 90 bp	TTCTGCATTGGTTTGGTCTGCATTGGTTTGGTAGTTCAGCACAGCTaGGAAGGCCTCAGGAAATCTACAATCATGGCGGAAGACAAAGAG	+
Preference number: 6 (lower is better) Translates to: FCIGLVCIGLVVQHS*EGLRKSTIMAEDKE Trigger: CTCTTTGTCTTCCGCCATGATTGTAGATTTCCTGAGGCCTTCCAAGCTGTGCTGAACTACCAAACCAATGCAGACCAAACCAATGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683938.1
CDS CCA 72 bp	TGCTGTCTTGTCCAAATTGTTAAGTTCAGCACAGCTTaGAAGGCCTCAGGAAATCTACAATCATGGCGGAAG	+
Preference number: 6 (lower is better) Translates to: CCLVQIVKFSTA*KASGNLQSWRK Trigger: CTTCCGCCATGATTGTAGATTTCCTGAGGCCTTCCAAGCTGTGCTGAACTTAACAATTTGGACAAGACAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000682139.1
CDS CAA 72 bp	AATGTAAGACCACCATCAGCACATAGGAGTTCTGCATaGGTTTGGTCTGCATTGGTTTGGTCTTCAAGTTTG	+
Preference number: 6 (lower is better) Translates to: NVRPPSAHRSSA*VWSALVWSSSL Trigger: CAAACTTGAAGACCAAACCAATGCAGACCAAACCAATGCAGAACTCCTATGTGCTGATGGTGGTCTTACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000682782.1

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