Pregenerated sensors for LINC01877 (Homo sapiens)
Ensembl gene IDs: ENSG00000238217Ensembl transcript IDs: ENST00000419243.5, ENST00000427045.5, ENST00000439734.5, ENST00000453035.1, ENST00000655676.1, ENST00000656508.1, ENST00000657231.1, ENST00000657450.1, ENST00000663879.1, ENST00000664879.1, ENST00000669659.1
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | TTCTGCAAGGCCTCCTGTGCCCTGGGGAGTGTGGACTGCACCTTGTaGGCCAGAGGGTTTGGGAGGCAATGGGGAGCAGGAGAGGTGAGC | + |
Preference number: 5 (lower is better) Translates to: FCKASCALGSVDCTL*ARGFGRQWGAGEVS Trigger: GCTCACCTCTCCTGCTCCCCATTGCCTCCCAAACCCTCTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTTGCAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS GCA 90 bp | GAGTCCAACTTCTGCAAGGCCTCCTGTGCCCTGGGGAGTGTGGACTaGACCTTGTGGGCCAGAGGGTTTGGGAGGCAATGGGGAGCAGGA | + |
Preference number: 5 (lower is better) Translates to: ESNFCKASCALGSVD*TLWARGFGRQWGAG Trigger: TCCTGCTCCCCATTGCCTCCCAAACCCTCTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTTGCAGAAGTTGGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS CCA 90 bp | CTGGTGACGGAGGCTGAAGCAAAGGTGTATCTTGATCCCATCCCATaGGCTCATGTCACTACTGAGCCCCTCCAGACTCCATGGTATGCC | + |
Preference number: 5 (lower is better) Translates to: LVTEAEAKVYLDPIP*AHVTTEPLQTPWYA Trigger: GGCATACCATGGAGTCTGGAGGGGCTCAGTAGTGACATGAGCCCATGGGATGGGATCAAGATACACCTTTGCTTCAGCCTCCGTCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657450.1 ENST00000664879.1 |
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CDS GCA 90 bp | CAGCTTTCCTTCAGTGGCTGCCCTGTGACCTCCTGCTCTGACACCTaGTCCCTCTTAGGGTTTTCATACCTGATGGTACATCGGGACTTC | + |
Preference number: 5 (lower is better) Translates to: QLSFSGCPVTSCSDT*SLLGFSYLMVHRDF Trigger: GAAGTCCCGATGTACCATCAGGTATGAAAACCCTAAGAGGGAGCAGGTGTCAGAGCAGGAGGTCACAGGGCAGCCACTGAAGGAAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS TCA 90 bp | CAATTCTGGAGGCTGGGAAGTCCAAGATCAAGGGGCCATATCTGGTaGGGGTCTTCCTGCAGGATCATAACATGGCAAAGGGCATCCTCC | + |
Preference number: 5 (lower is better) Translates to: QFWRLGSPRSRGHIW*GSSCRIITWQRASS Trigger: GGAGGATGCCCTTTGCCATGTTATGATCCTGCAGGAAGACCCTCACCAGATATGGCCCCTTGATCTTGGACTTCCCAGCCTCCAGAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419243.5 ENST00000427045.5 ENST00000439734.5 ENST00000657231.1 |
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CDS TCA 90 bp | CCCACCTCCCAGTACTGCTGCATCGGGGATCAAGTTTCCAACACATaGACTTTGGGGGACGCATTCAAACCACAGCAGAGCCTCTTCTCT | + |
Preference number: 5 (lower is better) Translates to: PTSQYCCIGDQVSNT*TLGDAFKPQQSLFS Trigger: AGAGAAGAGGCTCTGCTGTGGTTTGAATGCGTCCCCCAAAGTTCATGTGTTGGAAACTTGATCCCCGATGCAGCAGTACTGGGAGGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000656508.1 ENST00000657450.1 ENST00000663879.1 ENST00000664879.1 |
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CDS TCA 90 bp | CAGAATGCAGCTTTCCTTCAGTGGCTGCCCTGTGACCTCCTGCTCTaGCACCTGCTCCCTCTTAGGGTTTTCATACCTGATGGTACATCG | + |
Preference number: 5 (lower is better) Translates to: QNAAFLQWLPCDLLL*HLLPLRVFIPDGTS Trigger: CGATGTACCATCAGGTATGAAAACCCTAAGAGGGAGCAGGTGTCAGAGCAGGAGGTCACAGGGCAGCCACTGAAGGAAAGCTGCATTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS CCA 90 bp | CCCTGGGTAATCTGGTTTCTGGACAGCCTCGTGGAGACAGGCATATaGAGATCAAGGGGCGAGAAGCTGAGATATGACACTCCAGTCCTA | + |
Preference number: 5 (lower is better) Translates to: PWVIWFLDSLVETGI*RSRGEKLRYDTPVL Trigger: TAGGACTGGAGTGTCATATCTCAGCTTCTCGCCCCTTGATCTCCATATGCCTGTCTCCACGAGGCTGTCCAGAAACCAGATTACCCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453035.1 |
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CDS CCA 90 bp | AGGGGCGAGAAGCTGAGATATGACACTCCAGTCAATTCTGGAGGCTaGGAAGTCCAAGATCAAGGGGCCATATCTGGTGAGGGTCTTCCT | + |
Preference number: 5 (lower is better) Translates to: RGEKLRYDTPVNSGG*EVQDQGAISGEGLP Trigger: AGGAAGACCCTCACCAGATATGGCCCCTTGATCTTGGACTTCCCAGCCTCCAGAATTGACTGGAGTGTCATATCTCAGCTTCTCGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657231.1 ENST00000669659.1 |
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CDS TCA 90 bp | GCATCCTCCCAGTACTGCTGCATCGGGGATCAAGTTTCCAACACATaGACTTTGGGGGACGCATTCAAACCACAGCAGAGCCTCTTCTCT | + |
Preference number: 5 (lower is better) Translates to: ASSQYCCIGDQVSNT*TLGDAFKPQQSLFS Trigger: AGAGAAGAGGCTCTGCTGTGGTTTGAATGCGTCCCCCAAAGTTCATGTGTTGGAAACTTGATCCCCGATGCAGCAGTACTGGGAGGATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000419243.5 ENST00000427045.5 ENST00000439734.5 ENST00000657231.1 |
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CDS TCA 90 bp | CAATTCTGGAGGCTGGGAAGTCCAAGATCAAGGGGCCATATCTGGTaGGGGTCTTCCTGCAGGATCATAACATGGCAAAGGGCATCCTCT | + |
Preference number: 5 (lower is better) Translates to: QFWRLGSPRSRGHIW*GSSCRIITWQRASS Trigger: AGAGGATGCCCTTTGCCATGTTATGATCCTGCAGGAAGACCCTCACCAGATATGGCCCCTTGATCTTGGACTTCCCAGCCTCCAGAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS TCA 90 bp | CAATTCTGGAGGCTGGGAAGTCCAAGATCAAGGGGCCATATCTGGTaGGGGTCTTCCTGCAGGATCATAACATGGCAAAGGGCATCCTAT | + |
Preference number: 5 (lower is better) Translates to: QFWRLGSPRSRGHIW*GSSCRIITWQRASY Trigger: ATAGGATGCCCTTTGCCATGTTATGATCCTGCAGGAAGACCCTCACCAGATATGGCCCCTTGATCTTGGACTTCCCAGCCTCCAGAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000656508.1 ENST00000657450.1 ENST00000663879.1 ENST00000664879.1 |
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CDS GCA 90 bp | TGGGTGTCTGACTCTAAATCCAGTACTCTTTTCTCCCTGCACTGCTaGTTCCTGCTTCTTGGGCTGACCCTCTCCAGTTTCATCTCTTGG | + |
Preference number: 5 (lower is better) Translates to: WVSDSKSSTLFSLHC*FLLLGLTLSSFISW Trigger: CCAAGAGATGAAACTGGAGAGGGTCAGCCCAAGAAGCAGGAAGCAGCAGTGCAGGGAGAAAAGAGTACTGGATTTAGAGTCAGACACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000427045.5 ENST00000656508.1 |
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CDS GCA 90 bp | TGGGTGTCTGACTCTAAATCCAGTACTCTTTTCTCCCTGCACTGCTaGTTCCTGCTTCTTGGGCTGACCCTGAAATATTGCAGTAGCCTC | + |
Preference number: 5 (lower is better) Translates to: WVSDSKSSTLFSLHC*FLLLGLTLKYCSSL Trigger: GAGGCTACTGCAATATTTCAGGGTCAGCCCAAGAAGCAGGAAGCAGCAGTGCAGGGAGAAAAGAGTACTGGATTTAGAGTCAGACACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657231.1 ENST00000664879.1 |
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CDS GCA 90 bp | ACCTGGGTGTCTGACTCTAAATCCAGTACTCTTTTCTCCCTGCACTaGTGCTTCCTGCTTCTTGGGCTGACCCTGAAATATTGCAGTAGC | + |
Preference number: 5 (lower is better) Translates to: TWVSDSKSSTLFSLH*CFLLLGLTLKYCSS Trigger: GCTACTGCAATATTTCAGGGTCAGCCCAAGAAGCAGGAAGCAGCAGTGCAGGGAGAAAAGAGTACTGGATTTAGAGTCAGACACCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657231.1 ENST00000664879.1 |
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CDS TCA 90 bp | TCCTTCCTGCTGGCAGGAATAAGACTAAACATCAGACATCTATCTTaGACCGTGAGGAAGAAGCCACTCACTGAGGATGATGGAGCCACA | + |
Preference number: 5 (lower is better) Translates to: SFLLAGIRLNIRHLS*TVRKKPLTEDDGAT Trigger: TGTGGCTCCATCATCCTCAGTGAGTGGCTTCTTCCTCACGGTTCAAGATAGATGTCTGATGTTTAGTCTTATTCCTGCCAGCAGGAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS TCA 90 bp | CCAGGTGATGAAGATGCCCCTTCCGTTAGGAGACAATATCTAAGATaGGGCTTGATAGAGAAGTGGGAGTTAGCCAGGAAAGAAAGAGCC | + |
Preference number: 5 (lower is better) Translates to: PGDEDAPSVRRQYLR*GLIEKWELARKERA Trigger: GGCTCTTTCTTTCCTGGCTAACTCCCACTTCTCTATCAAGCCTCATCTTAGATATTGTCTCCTAACGGAAGGGGCATCTTCATCACCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS GCA 90 bp | ACTCTGTCTCAAAACAGGAGGTTGGGGGTGGGTATGCCATTCTTCTaGTCTTCCTTCCTGCTGGCAGGAATAAGACTAAACATCAGACAT | + |
Preference number: 5 (lower is better) Translates to: TLSQNRRLGVGMPFF*SSFLLAGIRLNIRH Trigger: ATGTCTGATGTTTAGTCTTATTCCTGCCAGCAGGAAGGAAGAGCAGAAGAATGGCATACCCACCCCCAACCTCCTGTTTTGAGACAGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS TCA 90 bp | CGAGATAACAAACCCACTCCTGCAATAACAGCATTAATCCATTCATaGGGGCAGGGTCCTCATGACTTAAACACCTCTCAAAGGTCCCAC | + |
Preference number: 5 (lower is better) Translates to: RDNKPTPAITALIHS*GQGPHDLNTSQRSH Trigger: GTGGGACCTTTGAGAGGTGTTTAAGTCATGAGGACCCTGCCCTCATGAATGGATTAATGCTGTTATTGCAGGAGTGGGTTTGTTATCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656508.1 ENST00000657450.1 ENST00000663879.1 ENST00000664879.1 |
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CDS TCA 90 bp | GCTGCAGTGAGCTATGATCACTATACTCTAGCATGGACAATAAAGTaGGACTCTGTCTCAAAACAGGAGGTTGGGGGTGGGTATGCCATT | + |
Preference number: 5 (lower is better) Translates to: AAVSYDHYTLAWTIK*DSVSKQEVGGGYAI Trigger: AATGGCATACCCACCCCCAACCTCCTGTTTTGAGACAGAGTCTCACTTTATTGTCCATGCTAGAGTATAGTGATCATAGCTCACTGCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS GCA 90 bp | AAAGAGTTGCCTCTGGCTATAAGAAACTTAGAAGCTGCTGGGTTGTaGTTCCTTAACCCTCATACTGCTATTCACACCAAACTTGGGCAC | + |
Preference number: 5 (lower is better) Translates to: KELPLAIRNLEAAGL*FLNPHTAIHTKLGH Trigger: GTGCCCAAGTTTGGTGTGAATAGCAGTATGAGGGTTAAGGAAGCACAACCCAGCAGCTTCTAAGTTTCTTATAGCCAGAGGCAACTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657450.1 ENST00000664879.1 |
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CDS CCA 90 bp | TCCCCTCTCTGCAGCCAGGTGATGCTGTCTTGCAATAGAGTCCTTTaGCTTTTTCTGGATACCATAAGTTTACCAGTAGATGTGATGATG | + |
Preference number: 5 (lower is better) Translates to: SPLCSQVMLSCNRVL*LFLDTISLPVDVMM Trigger: CATCATCACATCTACTGGTAAACTTATGGTATCCAGAAAAAGCCAAAGGACTCTATTGCAAGACAGCATCACCTGGCTGCAGAGAGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664879.1 |
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CDS CCA 90 bp | AGGTGTAAACTAAGTAGGAACCATTTAGAAAGCGACCTGTCTTTGTaGCACCTTGAACACAGGGATAAGGAAAGAGGTGGCTTCATCTGG | + |
Preference number: 5 (lower is better) Translates to: RCKLSRNHLESDLSL*HLEHRDKERGGFIW Trigger: CCAGATGAAGCCACCTCTTTCCTTATCCCTGTGTTCAAGGTGCCACAAAGACAGGTCGCTTTCTAAATGGTTCCTACTTAGTTTACACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS GCA 90 bp | GCCAGGTCACAAACAGCCACAGTTAATGTTCTTCAAATCAGCAAGTaGATTTTTAGCTTCAAGTCTCATTCATGCCATTTCCTCCCAGGC | + |
Preference number: 5 (lower is better) Translates to: ARSQTATVNVLQISK*IFSFKSHSCHFLPG Trigger: GCCTGGGAGGAAATGGCATGAATGAGACTTGAAGCTAAAAATGCACTTGCTGATTTGAAGAACATTAACTGTGGCTGTTTGTGACCTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000439734.5 ENST00000656508.1 ENST00000664879.1 |
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CDS TCA 90 bp | AAATCAAGCTGGGAAGACTGCTTCTATGAACTGCAAACTAGAACTTaGACCTGGGTGTCTGACTCTAAATCCAGTACTCTTTTCTCCCTG | + |
Preference number: 5 (lower is better) Translates to: KSSWEDCFYELQTRT*TWVSDSKSSTLFSL Trigger: CAGGGAGAAAAGAGTACTGGATTTAGAGTCAGACACCCAGGTTCAAGTTCTAGTTTGCAGTTCATAGAAGCAGTCTTCCCAGCTTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000419243.5 ENST00000427045.5 ENST00000439734.5 ENST00000656508.1 ENST00000657231.1 ENST00000663879.1 |
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CDS CCA 90 bp | GTAAGTCTCTGCAGCCAGGTGATGCTGTCTTGCAATAGAGTCCTTTaGCTTTTTCTGGATACCATAAGTTTACCAGTAGATGTGATGATG | + |
Preference number: 5 (lower is better) Translates to: VSLCSQVMLSCNRVL*LFLDTISLPVDVMM Trigger: CATCATCACATCTACTGGTAAACTTATGGTATCCAGAAAAAGCCAAAGGACTCTATTGCAAGACAGCATCACCTGGCTGCAGAGACTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000439734.5 ENST00000453035.1 ENST00000656508.1 |
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CDS CCA 90 bp | AGCAGATACATTTCCATAGACTTGGGCTGGGCTGAGAAATCTACCTaGATGCATGGGGGTGAATCAAATGACATCTCAGTAATTTATTTC | + |
Preference number: 5 (lower is better) Translates to: SRYISIDLGWAEKST*MHGGESNDISVIYF Trigger: GAAATAAATTACTGAGATGTCATTTGATTCACCCCCATGCATCCAGGTAGATTTCTCAGCCCAGCCCAAGTCTATGGAAATGTATCTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655676.1 |
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CDS TCA 90 bp | CAAGAGGACACCATCCCTCTCCTAGGCCAGAAGGGTCATTATATGTaGTTTGAAAATCCATTGAGTTTGGATAAATTGTTTGAGAAGGGT | + |
Preference number: 5 (lower is better) Translates to: QEDTIPLLGQKGHYM*FENPLSLDKLFEKG Trigger: ACCCTTCTCAAACAATTTATCCAAACTCAATGGATTTTCAAATCACATATAATGACCCTTCTGGCCTAGGAGAGGGATGGTGTCCTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439734.5 ENST00000656508.1 ENST00000657450.1 ENST00000664879.1 |
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CDS TCA 90 bp | CTTTACTTTACCAATTCCCTGATGACCATTATTTTGTCTACTCAGTaGCATTCTTCCTTCTTCCAGCCTCAGAATGCAGCTTTCCTTCAG | + |
Preference number: 5 (lower is better) Translates to: LYFTNSLMTIILSTQ*HSSFFQPQNAAFLQ Trigger: CTGAAGGAAAGCTGCATTCTGAGGCTGGAAGAAGGAAGAATGTCACTGAGTAGACAAAATAATGGTCATCAGGGAATTGGTAAAGTAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS CCA 90 bp | GAAAATAGAAATTCACTGACCAGCAAGGTCTGGCAAACATTAGAATaGGCCATAGAAATGGAGACTTCCGGTTGTCTCTCAATATCTGTT | + |
Preference number: 5 (lower is better) Translates to: ENRNSLTSKVWQTLE*AIEMETSGCLSISV Trigger: AACAGATATTGAGAGACAACCGGAAGTCTCCATTTCTATGGCCCATTCTAATGTTTGCCAGACCTTGCTGGTCAGTGAATTTCTATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS CCA 90 bp | AAGTTTCTAAGGGGGCTATCTTACAGTTCTTCTGTGCCATGGTTATaGCATGTGCCCACATCTGCTCATCTATTTACCTTACTAAAAAGA | + |
Preference number: 5 (lower is better) Translates to: KFLRGLSYSSSVPWL*HVPTSAHLFTLLKR Trigger: TCTTTTTAGTAAGGTAAATAGATGAGCAGATGTGGGCACATGCCATAACCATGGCACAGAAGAACTGTAAGATAGCCCCCTTAGAAACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000657231.1 |
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CDS GCA 90 bp | GTTCTCTCTTCCTCCTTAGTAGCAGAACCCATGATTTTTAAACCATaGACATTCCTCAGTTTCTATTACTACTGGGTGCTATATGTGACT | + |
Preference number: 5 (lower is better) Translates to: VLSSSLVAEPMIFKP*TFLSFYYYWVLYVT Trigger: AGTCACATATAGCACCCAGTAGTAATAGAAACTGAGGAATGTGCATGGTTTAAAAATCATGGGTTCTGCTACTAAGGAGGAAGAGAGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS GCA 90 bp | TCAGTTCACATTTTGTCTTTGCGCACAACTTCCAGAACATCACTTTaGCATCTTGTAAATCGGTTTGCATTATTTGTGATAATACTTACC | + |
Preference number: 5 (lower is better) Translates to: SVHILSLRTTSRTSL*HLVNRFALFVIILT Trigger: GGTAAGTATTATCACAAATAATGCAAACCGATTTACAAGATGGCAAAGTGATGTTCTGGAAGTTGTGCGCAAAGACAAAATGTGAACTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439734.5 ENST00000656508.1 ENST00000657450.1 ENST00000664879.1 |
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CDS GCA 90 bp | ATGGTCAGAATTTCATTTTTAGAGCCCACCATCTCTCTTAGGCAATaGTCTCTCTTCATAAAGCTATATTTTCAACTTCCTCTAAACTAC | + |
Preference number: 5 (lower is better) Translates to: MVRISFLEPTISLRQ*SLFIKLYFQLPLNY Trigger: GTAGTTTAGAGGAAGTTGAAAATATAGCTTTATGAAGAGAGAGCATTGCCTAAGAGAGATGGTGGGCTCTAAAAATGAAATTCTGACCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657231.1 |
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CDS GCA 72 bp | GGGCTGTGTGGCTGTATTGTGAGCCCACCTCGGCCGTaGCTGCTGGGTGCCCGTAGGCAGCTCTCTCATCTG | + |
Preference number: 6 (lower is better) Translates to: GLCGCIVSPPRP*LLGARRQLSHL Trigger: CAGATGAGAGAGCTGCCTACGGGCACCCAGCAGGCACGGCCGAGGTGGGCTCACAATACAGCCACACAGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS TCA 72 bp | CTAGTGAGGGAGCACTTGGGCTGTGTGGCTGTATTGTaGGCCCACCTCGGCCGTGCCTGCTGGGTGCCCGTA | + |
Preference number: 6 (lower is better) Translates to: LVREHLGCVAVL*AHLGRACWVPV Trigger: TACGGGCACCCAGCAGGCACGGCCGAGGTGGGCTCACAATACAGCCACACAGCCCAAGTGCTCCCTCACTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS GCA 72 bp | GGGGCTGAGAGAGTCCAACTTCTGCAAGGCCTCCTGTaGCCTGGGGAGTGTGGACTGCACCTTGTGGGCCAG | + |
Preference number: 6 (lower is better) Translates to: GAERVQLLQGLL*PGECGLHLVGQ Trigger: CTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTTGCAGAAGTTGGACTCTCTCAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS CCA 72 bp | CCAACTTCTGCAAGGCCTCCTGTGCCCTGGGGAGTGTaGACTGCACCTTGTGGGCCAGAGGGTTTGGGAGGC | + |
Preference number: 6 (lower is better) Translates to: PTSARPPVPWGV*TAPCGPEGLGG Trigger: GCCTCCCAAACCCTCTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTTGCAGAAGTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS CAA 72 bp | AAGGCCTCCTGTGCCCTGGGGAGTGTGGACTGCACCTaGTGGGCCAGAGGGTTTGGGAGGCAATGGGGAGCA | + |
Preference number: 6 (lower is better) Translates to: KASCALGSVDCT*WARGFGRQWGA Trigger: TGCTCCCCATTGCCTCCCAAACCCTCTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS CAA 90 bp | AACTTCTGCAAGGCCTCCTGTGCCCTGGGGAGTGTGGACTGCACCTaGTGGGCCAGAGGGTTTGGGAGGCAATGGGGAGCAGGAGAGGTG | + |
Preference number: 6 (lower is better) Translates to: NFCKASCALGSVDCT*WARGFGRQWGAGEV Trigger: CACCTCTCCTGCTCCCCATTGCCTCCCAAACCCTCTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTTGCAGAAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS GCA 72 bp | TTCTGCAAGGCCTCCTGTGCCCTGGGGAGTGTGGACTaGACCTTGTGGGCCAGAGGGTTTGGGAGGCAATGG | + |
Preference number: 6 (lower is better) Translates to: FCKASCALGSVD*TLWARGFGRQW Trigger: CCATTGCCTCCCAAACCCTCTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTTGCAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS CCA 72 bp | AAGCCAGAGGGCAAGGGAGCCAGCCCCTGGGTAATCTaGTTTCTGGACAGCCTCGTGGAGACAGGCATATGG | + |
Preference number: 6 (lower is better) Translates to: KPEGKGASPWVI*FLDSLVETGIW Trigger: CCATATGCCTGTCTCCACGAGGCTGTCCAGAAACCAGATTACCCAGGGGCTGGCTCCCTTGCCCTCTGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453035.1 |
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CDS GCA 72 bp | TCTTCCAGCCTCAGAATGCAGCTTTCCTTCAGTGGCTaGCCTGTGACCTCCTGCTCTGACACCTGCTCCCTC | + |
Preference number: 6 (lower is better) Translates to: SSSLRMQLSFSG*PVTSCSDTCSL Trigger: GAGGGAGCAGGTGTCAGAGCAGGAGGTCACAGGGCAGCCACTGAAGGAAAGCTGCATTCTGAGGCTGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS GCA 72 bp | ATGCAGCTTTCCTTCAGTGGCTGCCCTGTGACCTCCTaGTCTGACACCTGCTCCCTCTTAGGGTTTTCATAC | + |
Preference number: 6 (lower is better) Translates to: MQLSFSGCPVTS*SDTCSLLGFSY Trigger: GTATGAAAACCCTAAGAGGGAGCAGGTGTCAGAGCAGGAGGTCACAGGGCAGCCACTGAAGGAAAGCTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS CCA 72 bp | GGATTAATCTATAGCAGGGTGGTCACAGTTCATGCCTaGAGAACCACTCACAGGCAACCCTTGGCAGCCAGG | + |
Preference number: 6 (lower is better) Translates to: GLIYSRVVTVHA*RTTHRQPLAAR Trigger: CCTGGCTGCCAAGGGTTGCCTGTGAGTGGTTCTCCAGGCATGAACTGTGACCACCCTGCTATAGATTAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000439734.5 ENST00000656508.1 ENST00000657450.1 ENST00000664879.1 |
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CDS CCA 72 bp | TGGGCTCATGTCACTACTGAGCCCCTCCAGACTCCATaGTATGCCCATCCCCAGGTTTCTGTGTATCCCAAA | + |
Preference number: 6 (lower is better) Translates to: WAHVTTEPLQTP*YAHPQVSVYPK Trigger: TTTGGGATACACAGAAACCTGGGGATGGGCATACCATGGAGTCTGGAGGGGCTCAGTAGTGACATGAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657450.1 ENST00000664879.1 |
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CDS CCA 72 bp | GAGGCTGAAGCAAAGGTGTATCTTGATCCCATCCCATaGGCTCATGTCACTACTGAGCCCCTCCAGACTCCA | + |
Preference number: 6 (lower is better) Translates to: EAEAKVYLDPIP*AHVTTEPLQTP Trigger: TGGAGTCTGGAGGGGCTCAGTAGTGACATGAGCCCATGGGATGGGATCAAGATACACCTTTGCTTCAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657450.1 ENST00000664879.1 |
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CDS CCA 72 bp | GGAGCCACACTCAAAAGGACCAAGACAGAAGGACGATaGAGTCATTATACCAGCTCCGGACTGCTGAGCTCC | + |
Preference number: 6 (lower is better) Translates to: GATLKRTKTEGR*SHYTSSGLLSS Trigger: GGAGCTCAGCAGTCCGGAGCTGGTATAATGACTCCATCGTCCTTCTGTCTTGGTCCTTTTGAGTGTGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000655676.1 ENST00000657231.1 ENST00000657450.1 ENST00000664879.1 ENST00000669659.1 |
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CDS CCA 72 bp | CCATATAGAACAGGTGAGTCTGGATTGGCAGGTGCTTaGGTGGAGGGGCTGAGAGAGTCCAACTTCTGCAAG | + |
Preference number: 6 (lower is better) Translates to: PYRTGESGLAGA*VEGLRESNFCK Trigger: CTTGCAGAAGTTGGACTCTCTCAGCCCCTCCACCCAAGCACCTGCCAATCCAGACTCACCTGTTCTATATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS CAA 72 bp | AGTCATTATACCAGCTCCGGACTGCTGAGCTCCAGATaGCCAGGCATATGGAGATCAAGGGGCGAGAAGCTG | + |
Preference number: 6 (lower is better) Translates to: SHYTSSGLLSSR*PGIWRSRGEKL Trigger: CAGCTTCTCGCCCCTTGATCTCCATATGCCTGGCAATCTGGAGCTCAGCAGTCCGGAGCTGGTATAATGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657231.1 ENST00000669659.1 |
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CDS TCA 72 bp | AGGCTGGGAAGTCCAAGATCAAGGGGCCATATCTGGTaGGGGTCTTCCTGCAGGATCATAACATGGCAAAGG | + |
Preference number: 6 (lower is better) Translates to: RLGSPRSRGHIW*GSSCRIITWQR Trigger: CCTTTGCCATGTTATGATCCTGCAGGAAGACCCTCACCAGATATGGCCCCTTGATCTTGGACTTCCCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000419243.5 ENST00000427045.5 ENST00000439734.5 ENST00000656508.1 ENST00000657231.1 ENST00000657450.1 ENST00000663879.1 ENST00000664879.1 ENST00000669659.1 |
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CDS TCA 72 bp | GATTGCCAGGCATATGGAGATCAAGGGGCGAGAAGCTaGGATATGACACTCCAGTCAATTCTGGAGGCTGGG | + |
Preference number: 6 (lower is better) Translates to: DCQAYGDQGARS*DMTLQSILEAG Trigger: CCCAGCCTCCAGAATTGACTGGAGTGTCATATCTCAGCTTCTCGCCCCTTGATCTCCATATGCCTGGCAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657231.1 ENST00000669659.1 |
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CDS GCA 72 bp | TTCAGTGGCTGCCCTGTGACCTCCTGCTCTGACACCTaGTCCCTCTTAGGGTTTTCATACCTGATGGTACAT | + |
Preference number: 6 (lower is better) Translates to: FSGCPVTSCSDT*SLLGFSYLMVH Trigger: ATGTACCATCAGGTATGAAAACCCTAAGAGGGAGCAGGTGTCAGAGCAGGAGGTCACAGGGCAGCCACTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS GCA 72 bp | AGACTCTGTCTCAAAACAGGAGGTTGGGGGTGGGTATaGCATTCTTCTGCTCTTCCTTCCTGCTGGCAGGAA | + |
Preference number: 6 (lower is better) Translates to: RLCLKTGGWGWV*HSSALPSCWQE Trigger: TTCCTGCCAGCAGGAAGGAAGAGCAGAAGAATGGCATACCCACCCCCAACCTCCTGTTTTGAGACAGAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS CCA 72 bp | CTGCTTCTTGGGCTGACCCTCTCCAGTTTCATCTCTTaGGCTCCTCATCTCTGTGTCTCTCTAGATGGCGAA | + |
Preference number: 6 (lower is better) Translates to: LLLGLTLSSFIS*APHLCVSLDGE Trigger: TTCGCCATCTAGAGAGACACAGAGATGAGGAGCCCAAGAGATGAAACTGGAGAGGGTCAGCCCAAGAAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427045.5 |
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CDS TCA 72 bp | CAGTACTGCTGCATCGGGGATCAAGTTTCCAACACATaGACTTTGGGGGACGCATTCAAACCACAGCAGAGC | + |
Preference number: 6 (lower is better) Translates to: QYCCIGDQVSNT*TLGDAFKPQQS Trigger: GCTCTGCTGTGGTTTGAATGCGTCCCCCAAAGTTCATGTGTTGGAAACTTGATCCCCGATGCAGCAGTACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000419243.5 ENST00000427045.5 ENST00000439734.5 ENST00000656508.1 ENST00000657231.1 ENST00000657450.1 ENST00000663879.1 ENST00000664879.1 |
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CDS GCA 72 bp | TCTGACTCTAAATCCAGTACTCTTTTCTCCCTGCACTaGTGCTTCCTGCTTCTTGGGCTGACCCTCTCCAGT | + |
Preference number: 6 (lower is better) Translates to: SDSKSSTLFSLH*CFLLLGLTLSS Trigger: ACTGGAGAGGGTCAGCCCAAGAAGCAGGAAGCAGCAGTGCAGGGAGAAAAGAGTACTGGATTTAGAGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000427045.5 ENST00000656508.1 |
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CDS GCA 72 bp | GGAAAGAAAGAGCCCTTCAGACGGAGGAAAAGCAGGTaGTCCCCATATAGAACAGGTGAGTCTGGATTGGCA | + |
Preference number: 6 (lower is better) Translates to: GKKEPFRRRKSR*SPYRTGESGLA Trigger: TGCCAATCCAGACTCACCTGTTCTATATGGGGAGCACCTGCTTTTCCTCCGTCTGAAGGGCTCTTTCTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS CCA 72 bp | AAAGTGAGACTCTGTCTCAAAACAGGAGGTTGGGGGTaGGTATGCCATTCTTCTGCTCTTCCTTCCTGCTGG | + |
Preference number: 6 (lower is better) Translates to: KVRLCLKTGGWG*VCHSSALPSCW Trigger: CCAGCAGGAAGGAAGAGCAGAAGAATGGCATACCCACCCCCAACCTCCTGTTTTGAGACAGAGTCTCACTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS GCA 72 bp | CAAAACAGGAGGTTGGGGGTGGGTATGCCATTCTTCTaGTCTTCCTTCCTGCTGGCAGGAATAAGACTAAAC | + |
Preference number: 6 (lower is better) Translates to: QNRRLGVGMPFF*SSFLLAGIRLN Trigger: GTTTAGTCTTATTCCTGCCAGCAGGAAGGAAGAGCAGAAGAATGGCATACCCACCCCCAACCTCCTGTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS CCA 72 bp | AAGCTGAGATATGACACTCCAGTCAATTCTGGAGGCTaGGAAGTCCAAGATCAAGGGGCCATATCTGGTGAG | + |
Preference number: 6 (lower is better) Translates to: KLRYDTPVNSGG*EVQDQGAISGE Trigger: CTCACCAGATATGGCCCCTTGATCTTGGACTTCCCAGCCTCCAGAATTGACTGGAGTGTCATATCTCAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657231.1 ENST00000669659.1 |
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CDS CAA 72 bp | GTTGACACAGAGGATGCCAGACCAGGGATCAAAGAGTaGCCTCTGGCTATAAGAAACTTAGAAGCTGCTGGG | + |
Preference number: 6 (lower is better) Translates to: VDTEDARPGIKE*PLAIRNLEAAG Trigger: CCCAGCAGCTTCTAAGTTTCTTATAGCCAGAGGCAACTCTTTGATCCCTGGTCTGGCATCCTCTGTGTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657450.1 ENST00000664879.1 |
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CDS CAA 72 bp | AGTCATTATACCAGCTCCGGACTGCTGAGCTCCAGATaGCCTTGTGCTACCTGTGATTTCTGCAGCACTGAT | + |
Preference number: 6 (lower is better) Translates to: SHYTSSGLLSSR*PCATCDFCSTD Trigger: ATCAGTGCTGCAGAAATCACAGGTAGCACAAGGCAATCTGGAGCTCAGCAGTCCGGAGCTGGTATAATGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS TCA 72 bp | AACAGCATTAATCCATTCATGAGGGCAGGGTCCTCATaGCTTAAACACCTCTCAAAGGTCCCACCTCCCAGT | + |
Preference number: 6 (lower is better) Translates to: NSINPFMRAGSS*LKHLSKVPPPS Trigger: ACTGGGAGGTGGGACCTTTGAGAGGTGTTTAAGTCATGAGGACCCTGCCCTCATGAATGGATTAATGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656508.1 ENST00000657450.1 ENST00000663879.1 ENST00000664879.1 |
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CDS TCA 72 bp | GATTTCTGCAGCACTGATCTCAGCCTTCATTCTTCTTaGCCTACATGGCTCATTCATGGGGTTGTCTCCCCT | + |
Preference number: 6 (lower is better) Translates to: DFCSTDLSLHSS*PTWLIHGVVSP Trigger: AGGGGAGACAACCCCATGAATGAGCCATGTAGGTCAAGAAGAATGAAGGCTGAGATCAGTGCTGCAGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS TCA 72 bp | TTCAGACGACTTCTCACTGGGTTCAGTGTACGGCAATaGAATGCAAATCATAAACGATGCGAGCTGGCCTCC | + |
Preference number: 6 (lower is better) Translates to: FRRLLTGFSVRQ*NANHKRCELAS Trigger: GGAGGCCAGCTCGCATCGTTTATGATTTGCATTTCATTGCCGTACACTGAACCCAGTGAGAAGTCGTCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS GCA 72 bp | TCTGACTCTAAATCCAGTACTCTTTTCTCCCTGCACTaGTGCTTCCTGCTTCTTGGGCTGACCCTTCCTTTT | + |
Preference number: 6 (lower is better) Translates to: SDSKSSTLFSLH*CFLLLGLTLPF Trigger: AAAAGGAAGGGTCAGCCCAAGAAGCAGGAAGCAGCAGTGCAGGGAGAAAAGAGTACTGGATTTAGAGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419243.5 ENST00000439734.5 ENST00000657450.1 ENST00000663879.1 |
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CDS GCA 72 bp | CTTCTTTGCCAAGAGAAGATGCTTCATCATCCCAGCTaGTGCTGGAGATGTTCTGCTCTCCAGTTTCATCTC | + |
Preference number: 6 (lower is better) Translates to: LLCQEKMLHHPS*CWRCSALQFHL Trigger: GAGATGAAACTGGAGAGCAGAACATCTCCAGCAGCAGCTGGGATGATGAAGCATCTTCTCTTGGCAAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664879.1 |
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CDS CCA 72 bp | CCTGTTATCTCTCCCTTTCCACCTTCAATGTCCAGGTaGTACCTATTATTGGCTGAGTCCAACCAGAAGCCA | + |
Preference number: 6 (lower is better) Translates to: PVISPFPPSMSR*YLLLAESNQKP Trigger: TGGCTTCTGGTTGGACTCAGCCAATAATAGGTACCACCTGGACATTGAAGGTGGAAAGGGAGAGATAACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453035.1 |
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CDS CAA 90 bp | GACATAATTGTTGACACAGAGGATGCCAGACCAGGGATCAAAGAGTaGCCTCTGGCTATAAGAAACTTAGAAGCTGCTGGGTTGTGCTTC | + |
Preference number: 6 (lower is better) Translates to: DIIVDTEDARPGIKE*PLAIRNLEAAGLCF Trigger: GAAGCACAACCCAGCAGCTTCTAAGTTTCTTATAGCCAGAGGCAACTCTTTGATCCCTGGTCTGGCATCCTCTGTGTCAACAATTATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657450.1 ENST00000664879.1 |
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CDS TCA 72 bp | CATGGCTCATTCATGGGGTTGTCTCCCCTCTCCTTATaGAAAGTCTTCTCACTTGAGCTGTCATGGCATTGT | + |
Preference number: 6 (lower is better) Translates to: HGSFMGLSPLSL*KVFSLELSWHC Trigger: ACAATGCCATGACAGCTCAAGTGAGAAGACTTTTCATAAGGAGAGGGGAGACAACCCCATGAATGAGCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS GCA 72 bp | TCTGACTCTAAATCCAGTACTCTTTTCTCCCTGCACTaGTGCTTCCTGCTTCTTGGGCTGACCCTGAAATAT | + |
Preference number: 6 (lower is better) Translates to: SDSKSSTLFSLH*CFLLLGLTLKY Trigger: ATATTTCAGGGTCAGCCCAAGAAGCAGGAAGCAGCAGTGCAGGGAGAAAAGAGTACTGGATTTAGAGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657231.1 ENST00000664879.1 |
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CDS CAA 90 bp | CTGGGTTGTGCTTCCTTAACCCTCATACTGCTATTCACACCAAACTaGGGCACTTACCAGAATCTCCTCTCTCTATCCCTTTTCTTTGCT | + |
Preference number: 6 (lower is better) Translates to: LGCASLTLILLFTPN*GTYQNLLSLSLFFA Trigger: AGCAAAGAAAAGGGATAGAGAGAGGAGATTCTGGTAAGTGCCCAAGTTTGGTGTGAATAGCAGTATGAGGGTTAAGGAAGCACAACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657450.1 ENST00000664879.1 |
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CDS CAA 90 bp | CTCAGGTGTAAACTAAGTAGGAACCATTTAGAAAGCGACCTGTCTTaGTGGCACCTTGAACACAGGGATAAGGAAAGAGGTGGCTTCATC | + |
Preference number: 6 (lower is better) Translates to: LRCKLSRNHLESDLS*WHLEHRDKERGGFI Trigger: GATGAAGCCACCTCTTTCCTTATCCCTGTGTTCAAGGTGCCACAAAGACAGGTCGCTTTCTAAATGGTTCCTACTTAGTTTACACCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS GCA 72 bp | ATCAGCAAGTGCATTTTTAGCTTCAAGTCTCATTCATaGCATTTCCTCCCAGGCATATGGAGATCAAGGGGC | + |
Preference number: 6 (lower is better) Translates to: ISKCIFSFKSHS*HFLPGIWRSRG Trigger: GCCCCTTGATCTCCATATGCCTGGGAGGAAATGGCATGAATGAGACTTGAAGCTAAAAATGCACTTGCTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000439734.5 ENST00000656508.1 ENST00000664879.1 |
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CDS GCA 72 bp | TCTCTGATTTTGGTGTTCTTCTTTGCCAAGAGAAGATaGTTCATCATCCCAGCTGCTGCTGGAGATGTTCTG | + |
Preference number: 6 (lower is better) Translates to: SLILVFFFAKRR*FIIPAAAGDVL Trigger: CAGAACATCTCCAGCAGCAGCTGGGATGATGAAGCATCTTCTCTTGGCAAAGAAGAACACCAAAATCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657231.1 ENST00000664879.1 |
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CDS CCA 72 bp | AATTCACTGACCAGCAAGGTCTGGCAAACATTAGAATaGGCCATAGAAATGGAGACTTCCGGTTGTCTCTCA | + |
Preference number: 6 (lower is better) Translates to: NSLTSKVWQTLE*AIEMETSGCLS Trigger: TGAGAGACAACCGGAAGTCTCCATTTCTATGGCCCATTCTAATGTTTGCCAGACCTTGCTGGTCAGTGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS CCA 72 bp | AGCTGTGTGGCAGGGGTCTGCCTAGTCCTGATTGCTTaGTTTTATTCTGTAACACAAAGTGAAAGCTGTCAA | + |
Preference number: 6 (lower is better) Translates to: SCVAGVCLVLIA*FYSVTQSESCQ Trigger: TTGACAGCTTTCACTTTGTGTTACAGAATAAAACCAAGCAATCAGGACTAGGCAGACCCCTGCCACACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657231.1 |
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CDS CCA 72 bp | ATTTCCATAGACTTGGGCTGGGCTGAGAAATCTACCTaGATGCATGGGGGTGAATCAAATGACATCTCAGTA | + |
Preference number: 6 (lower is better) Translates to: ISIDLGWAEKST*MHGGESNDISV Trigger: TACTGAGATGTCATTTGATTCACCCCCATGCATCCAGGTAGATTTCTCAGCCCAGCCCAAGTCTATGGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655676.1 |
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CDS CAA 72 bp | GCTTCCTTAACCCTCATACTGCTATTCACACCAAACTaGGGCACTTACCAGAATCTCCTCTCTCTATCCCTT | + |
Preference number: 6 (lower is better) Translates to: ASLTLILLFTPN*GTYQNLLSLSL Trigger: AAGGGATAGAGAGAGGAGATTCTGGTAAGTGCCCAAGTTTGGTGTGAATAGCAGTATGAGGGTTAAGGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657450.1 ENST00000664879.1 |
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CDS CAA 72 bp | TTGCCTCTGGCTATAAGAAACTTAGAAGCTGCTGGGTaGTGCTTCCTTAACCCTCATACTGCTATTCACACC | + |
Preference number: 6 (lower is better) Translates to: LPLAIRNLEAAG*CFLNPHTAIHT Trigger: GGTGTGAATAGCAGTATGAGGGTTAAGGAAGCACAACCCAGCAGCTTCTAAGTTTCTTATAGCCAGAGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657450.1 ENST00000664879.1 |
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CDS CAA 72 bp | CAGAATCCAGAGGGACGAAGGGCAGTTCCTGTAGAATaGGTGCAAAGTATAAAACTTCCCTGGAGAGATTCT | + |
Preference number: 6 (lower is better) Translates to: QNPEGRRAVPVE*VQSIKLPWRDS Trigger: AGAATCTCTCCAGGGAAGTTTTATACTTTGCACCAATTCTACAGGAACTGCCCTTCGTCCCTCTGGATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS CAA 90 bp | ATCAAAGAGTTGCCTCTGGCTATAAGAAACTTAGAAGCTGCTGGGTaGTGCTTCCTTAACCCTCATACTGCTATTCACACCAAACTTGGG | + |
Preference number: 6 (lower is better) Translates to: IKELPLAIRNLEAAG*CFLNPHTAIHTKLG Trigger: CCCAAGTTTGGTGTGAATAGCAGTATGAGGGTTAAGGAAGCACAACCCAGCAGCTTCTAAGTTTCTTATAGCCAGAGGCAACTCTTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657450.1 ENST00000664879.1 |
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CDS TCA 72 bp | CAGTTTTCAGGAATGTTGAAGAGGGGACATAATTGTTaGCACAGAGGATGCCAGACCAGGGATCAAAGAGTT | + |
Preference number: 6 (lower is better) Translates to: QFSGMLKRGHNC*HRGCQTRDQRV Trigger: AACTCTTTGATCCCTGGTCTGGCATCCTCTGTGTCAACAATTATGTCCCCTCTTCAACATTCCTGAAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657450.1 ENST00000664879.1 |
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CDS TCA 72 bp | CTGGCAGGAATAAGACTAAACATCAGACATCTATCTTaGACCGTGAGGAAGAAGCCACTCACTGAGGATGAT | + |
Preference number: 6 (lower is better) Translates to: LAGIRLNIRHLS*TVRKKPLTEDD Trigger: ATCATCCTCAGTGAGTGGCTTCTTCCTCACGGTTCAAGATAGATGTCTGATGTTTAGTCTTATTCCTGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS CAA 72 bp | CCCTGGAGAGATTCTAGTAAATTCCCTTCCCTCCACTaGATCCTTTTGACTACCTTCCTTGGTAATGGAAGT | + |
Preference number: 6 (lower is better) Translates to: PWRDSSKFPSLH*ILLTTFLGNGS Trigger: ACTTCCATTACCAAGGAAGGTAGTCAAAAGGATCAAGTGGAGGGAAGGGAATTTACTAGAATCTCTCCAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS TCA 72 bp | TGGGAAGACTGCTTCTATGAACTGCAAACTAGAACTTaGACCTGGGTGTCTGACTCTAAATCCAGTACTCTT | + |
Preference number: 6 (lower is better) Translates to: WEDCFYELQTRT*TWVSDSKSSTL Trigger: AAGAGTACTGGATTTAGAGTCAGACACCCAGGTTCAAGTTCTAGTTTGCAGTTCATAGAAGCAGTCTTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000419243.5 ENST00000427045.5 ENST00000439734.5 ENST00000656508.1 ENST00000657231.1 ENST00000663879.1 |
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CDS TCA 72 bp | TTTGATAAAGTCATAAGGGACTTACCTTCTTCACCATaGGTAAAGGAGCCTGTCTCAGTCTGCTTTGTGCAG | + |
Preference number: 6 (lower is better) Translates to: FDKVIRDLPSSP*VKEPVSVCFVQ Trigger: CTGCACAAAGCAGACTGAGACAGGCTCCTTTACTCATGGTGAAGAAGGTAAGTCCCTTATGACTTTATCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000419243.5 ENST00000427045.5 ENST00000439734.5 ENST00000656508.1 ENST00000657450.1 ENST00000664879.1 |
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CDS TCA 72 bp | GTTGTCTCCCCTCTCCTTATGAAAAGTCTTCTCACTTaGGCTGTCATGGCATTGTACTGTCTTGATTCTTCT | + |
Preference number: 6 (lower is better) Translates to: VVSPLLMKSLLT*AVMALYCLDSS Trigger: AGAAGAATCAAGACAGTACAATGCCATGACAGCTCAAGTGAGAAGACTTTTCATAAGGAGAGGGGAGACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS GCA 72 bp | ATCAGCAAGTGCATTTTTAGCTTCAAGTCTCATTCATaGCATTTCCTCCCTGTTATCTCTCCCTTTCCACCT | + |
Preference number: 6 (lower is better) Translates to: ISKCIFSFKSHS*HFLPVISPFPP Trigger: AGGTGGAAAGGGAGAGATAACAGGGAGGAAATGGCATGAATGAGACTTGAAGCTAAAAATGCACTTGCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000453035.1 |
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CDS CCA 72 bp | TGCAGCCAGGTGATGCTGTCTTGCAATAGAGTCCTTTaGCTTTTTCTGGATACCATAAGTTTACCAGTAGAT | + |
Preference number: 6 (lower is better) Translates to: CSQVMLSCNRVL*LFLDTISLPVD Trigger: ATCTACTGGTAAACTTATGGTATCCAGAAAAAGCCAAAGGACTCTATTGCAAGACAGCATCACCTGGCTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000439734.5 ENST00000453035.1 ENST00000656508.1 ENST00000664879.1 |
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CDS CAA 72 bp | GATTCTAGTAAATTCCCTTCCCTCCACTTGATCCTTTaGACTACCTTCCTTGGTAATGGAAGTCATGGAAGG | + |
Preference number: 6 (lower is better) Translates to: DSSKFPSLHLIL*TTFLGNGSHGR Trigger: CCTTCCATGACTTCCATTACCAAGGAAGGTAGTCAAAAGGATCAAGTGGAGGGAAGGGAATTTACTAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS CAA 90 bp | GCTTTTTCTGGATACCATAAGTTTACCAGTAGATGTGATGATGGGTaGTCCTTTCCAGCCAGGTCACAAACAGCCACAGTTAATGTTCTT | + |
Preference number: 6 (lower is better) Translates to: AFSGYHKFTSRCDDG*SFPARSQTATVNVL Trigger: AAGAACATTAACTGTGGCTGTTTGTGACCTGGCTGGAAAGGACAACCCATCATCACATCTACTGGTAAACTTATGGTATCCAGAAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000439734.5 ENST00000453035.1 ENST00000656508.1 ENST00000664879.1 |
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CDS CAA 90 bp | ATAAAACTTCCCTGGAGAGATTCTAGTAAATTCCCTTCCCTCCACTaGATCCTTTTGACTACCTTCCTTGGTAATGGAAGTCATGGAAGG | + |
Preference number: 6 (lower is better) Translates to: IKLPWRDSSKFPSLH*ILLTTFLGNGSHGR Trigger: CCTTCCATGACTTCCATTACCAAGGAAGGTAGTCAAAAGGATCAAGTGGAGGGAAGGGAATTTACTAGAATCTCTCCAGGGAAGTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS CAA 90 bp | ACATCATGTCAGAATCCAGAGGGACGAAGGGCAGTTCCTGTAGAATaGGTGCAAAGTATAAAACTTCCCTGGAGAGATTCTAGTAAATTC | + |
Preference number: 6 (lower is better) Translates to: TSCQNPEGRRAVPVE*VQSIKLPWRDSSKF Trigger: GAATTTACTAGAATCTCTCCAGGGAAGTTTTATACTTTGCACCAATTCTACAGGAACTGCCCTTCGTCCCTCTGGATTCTGACATGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS TCA 72 bp | GATGATCAAAACAGTGAGTTCAGTTGTGTCATACTCTaGTTATTGGCTGGTGGGTTAGTGGTCCAATTGAGT | + |
Preference number: 6 (lower is better) Translates to: DDQNSEFSCVIL*LLAGGLVVQLS Trigger: ACTCAATTGGACCACTAACCCACCAGCCAATAATCAGAGTATGACACAACTGAACTCACTGTTTTGATCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS CAA 72 bp | AACATTAGAATGGGCCATAGAAATGGAGACTTCCGGTaGTCTCTCAATATCTGTTCTCTCTTCCTCCTTAGT | + |
Preference number: 6 (lower is better) Translates to: NIRMGHRNGDFR*SLNICSLFLLS Trigger: ACTAAGGAGGAAGAGAGAACAGATATTGAGAGACAACCGGAAGTCTCCATTTCTATGGCCCATTCTAATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655676.1 ENST00000657450.1 ENST00000664879.1 |
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CDS CAA 72 bp | CGACTCTGTTTTGTTTGTCTTTCGACATATTTCTGTTaGTCCTCGATTCAATGGTTACCTCACAATCATGCC | + |
Preference number: 6 (lower is better) Translates to: RLCFVCLSTYFC*SSIQWLPHNHA Trigger: GGCATGATTGTGAGGTAACCATTGAATCGAGGACAAACAGAAATATGTCGAAAGACAAACAAAACAGAGTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657231.1 |
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CDS CAA 72 bp | CCAACCTTTTGTAAACCCAAAGCGACTCTGTTTTGTTaGTCTTTCGACATATTTCTGTTTGTCCTCGATTCA | + |
Preference number: 6 (lower is better) Translates to: PTFCKPKATLFC*SFDIFLFVLDS Trigger: TGAATCGAGGACAAACAGAAATATGTCGAAAGACAAACAAAACAGAGTCGCTTTGGGTTTACAAAAGGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657231.1 |
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CDS TCA 72 bp | AAACATGCACCTTCTAGAGTTTTTGTGAGGACTCAATaGATCAGTCCATGCAAAATGAATAAGATAGTGCCT | + |
Preference number: 6 (lower is better) Translates to: KHAPSRVFVRTQ*ISPCKMNKIVP Trigger: AGGCACTATCTTATTCATTTTGCATGGACTGATTCATTGAGTCCTCACAAAAACTCTAGAAGGTGCATGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS GCA 72 bp | TTCTTCTGTGCCATGGTTATGGCATGTGCCCACATCTaGTCATCTATTTACCTTACTAAAAAGATAATCTAT | + |
Preference number: 6 (lower is better) Translates to: FFCAMVMACAHI*SSIYLTKKIIY Trigger: ATAGATTATCTTTTTAGTAAGGTAAATAGATGAGCAGATGTGGGCACATGCCATAACCATGGCACAGAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657231.1 |
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CDS GCA 72 bp | CAAACTCTTTCCGTAGTATGTATAAGGATGATCATGTaGAGGACAGGACGAATGAGTTTCCTTTTCTTATAT | + |
Preference number: 6 (lower is better) Translates to: QTLSVVCIRMIM*RTGRMSFLFLY Trigger: ATATAAGAAAAGGAAACTCATTCGTCCTGTCCTGCACATGATCATCCTTATACATACTACGGAAAGAGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669659.1 |
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CDS CAA 72 bp | CATTTTGTCTTTGCGCACAACTTCCAGAACATCACTTaGCCATCTTGTAAATCGGTTTGCATTATTTGTGAT | + |
Preference number: 6 (lower is better) Translates to: HFVFAHNFQNIT*PSCKSVCIICD Trigger: ATCACAAATAATGCAAACCGATTTACAAGATGGCAAAGTGATGTTCTGGAAGTTGTGCGCAAAGACAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439734.5 ENST00000656508.1 ENST00000657450.1 ENST00000664879.1 |
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CDS CAA 90 bp | TTCAGTTCACATTTTGTCTTTGCGCACAACTTCCAGAACATCACTTaGCCATCTTGTAAATCGGTTTGCATTATTTGTGATAATACTTAC | + |
Preference number: 6 (lower is better) Translates to: FSSHFVFAHNFQNIT*PSCKSVCIICDNTY Trigger: GTAAGTATTATCACAAATAATGCAAACCGATTTACAAGATGGCAAAGTGATGTTCTGGAAGTTGTGCGCAAAGACAAAATGTGAACTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439734.5 ENST00000656508.1 ENST00000657450.1 ENST00000664879.1 |
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CDS GCA 72 bp | ATTTTGTCTTTGCGCACAACTTCCAGAACATCACTTTaGCATCTTGTAAATCGGTTTGCATTATTTGTGATA | + |
Preference number: 6 (lower is better) Translates to: ILSLRTTSRTSL*HLVNRFALFVI Trigger: TATCACAAATAATGCAAACCGATTTACAAGATGGCAAAGTGATGTTCTGGAAGTTGTGCGCAAAGACAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439734.5 ENST00000656508.1 ENST00000657450.1 ENST00000664879.1 |
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CDS CAA 72 bp | CTAAACTACTTTTCAAATCTTCTTAGTCTTAAGGCCTaGGATATATGCTGGACTCTGACCAAAACTCAACAT | + |
Preference number: 6 (lower is better) Translates to: LNYFSNLLSLKA*DICWTLTKTQH Trigger: ATGTTGAGTTTTGGTCAGAGTCCAGCATATATCCAAGGCCTTAAGACTAAGAAGATTTGAAAAGTAGTTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657231.1 |
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CDS TCA 72 bp | TTCTTAGTCTTAAGGCCTTGGATATATGCTGGACTCTaGCCAAAACTCAACATCTTATATATTAGTTATTCC | + |
Preference number: 6 (lower is better) Translates to: FLVLRPWIYAGL*PKLNILYISYS Trigger: GGAATAACTAATATATAAGATGTTGAGTTTTGGTCAGAGTCCAGCATATATCCAAGGCCTTAAGACTAAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657231.1 |
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CDS TCA 72 bp | TCACATGGAATTATAAATTCAACTGTGAATTTCCTGTaGACGCATGGACTGTATGAGTTTGTTTCTGTATTC | + |
Preference number: 6 (lower is better) Translates to: SHGIINSTVNFL*THGLYEFVSVF Trigger: GAATACAGAAACAAACTCATACAGTCCATGCGTTCACAGGAAATTCACAGTTGAATTTATAATTCCATGTGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655676.1 |