RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01877 (Homo sapiens)

Ensembl gene IDs: ENSG00000238217

Ensembl transcript IDs: ENST00000419243.5, ENST00000427045.5, ENST00000439734.5, ENST00000453035.1, ENST00000655676.1, ENST00000656508.1, ENST00000657231.1, ENST00000657450.1, ENST00000663879.1, ENST00000664879.1, ENST00000669659.1

Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp TTCTGCAAGGCCTCCTGTGCCCTGGGGAGTGTGGACTGCACCTTGTaGGCCAGAGGGTTTGGGAGGCAATGGGGAGCAGGAGAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: FCKASCALGSVDCTL*ARGFGRQWGAGEVS
Trigger: GCTCACCTCTCCTGCTCCCCATTGCCTCCCAAACCCTCTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTTGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS GCA 90 bp GAGTCCAACTTCTGCAAGGCCTCCTGTGCCCTGGGGAGTGTGGACTaGACCTTGTGGGCCAGAGGGTTTGGGAGGCAATGGGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: ESNFCKASCALGSVD*TLWARGFGRQWGAG
Trigger: TCCTGCTCCCCATTGCCTCCCAAACCCTCTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTTGCAGAAGTTGGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS CCA 90 bp CTGGTGACGGAGGCTGAAGCAAAGGTGTATCTTGATCCCATCCCATaGGCTCATGTCACTACTGAGCCCCTCCAGACTCCATGGTATGCC +
Preference number: 5 (lower is better)
Translates to: LVTEAEAKVYLDPIP*AHVTTEPLQTPWYA
Trigger: GGCATACCATGGAGTCTGGAGGGGCTCAGTAGTGACATGAGCCCATGGGATGGGATCAAGATACACCTTTGCTTCAGCCTCCGTCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000657450.1
ENST00000664879.1
CDS GCA 90 bp CAGCTTTCCTTCAGTGGCTGCCCTGTGACCTCCTGCTCTGACACCTaGTCCCTCTTAGGGTTTTCATACCTGATGGTACATCGGGACTTC +
Preference number: 5 (lower is better)
Translates to: QLSFSGCPVTSCSDT*SLLGFSYLMVHRDF
Trigger: GAAGTCCCGATGTACCATCAGGTATGAAAACCCTAAGAGGGAGCAGGTGTCAGAGCAGGAGGTCACAGGGCAGCCACTGAAGGAAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS TCA 90 bp CAATTCTGGAGGCTGGGAAGTCCAAGATCAAGGGGCCATATCTGGTaGGGGTCTTCCTGCAGGATCATAACATGGCAAAGGGCATCCTCC +
Preference number: 5 (lower is better)
Translates to: QFWRLGSPRSRGHIW*GSSCRIITWQRASS
Trigger: GGAGGATGCCCTTTGCCATGTTATGATCCTGCAGGAAGACCCTCACCAGATATGGCCCCTTGATCTTGGACTTCCCAGCCTCCAGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000419243.5
ENST00000427045.5
ENST00000439734.5
ENST00000657231.1
CDS TCA 90 bp CCCACCTCCCAGTACTGCTGCATCGGGGATCAAGTTTCCAACACATaGACTTTGGGGGACGCATTCAAACCACAGCAGAGCCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: PTSQYCCIGDQVSNT*TLGDAFKPQQSLFS
Trigger: AGAGAAGAGGCTCTGCTGTGGTTTGAATGCGTCCCCCAAAGTTCATGTGTTGGAAACTTGATCCCCGATGCAGCAGTACTGGGAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000656508.1
ENST00000657450.1
ENST00000663879.1
ENST00000664879.1
CDS TCA 90 bp CAGAATGCAGCTTTCCTTCAGTGGCTGCCCTGTGACCTCCTGCTCTaGCACCTGCTCCCTCTTAGGGTTTTCATACCTGATGGTACATCG +
Preference number: 5 (lower is better)
Translates to: QNAAFLQWLPCDLLL*HLLPLRVFIPDGTS
Trigger: CGATGTACCATCAGGTATGAAAACCCTAAGAGGGAGCAGGTGTCAGAGCAGGAGGTCACAGGGCAGCCACTGAAGGAAAGCTGCATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS CCA 90 bp CCCTGGGTAATCTGGTTTCTGGACAGCCTCGTGGAGACAGGCATATaGAGATCAAGGGGCGAGAAGCTGAGATATGACACTCCAGTCCTA +
Preference number: 5 (lower is better)
Translates to: PWVIWFLDSLVETGI*RSRGEKLRYDTPVL
Trigger: TAGGACTGGAGTGTCATATCTCAGCTTCTCGCCCCTTGATCTCCATATGCCTGTCTCCACGAGGCTGTCCAGAAACCAGATTACCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453035.1
CDS CCA 90 bp AGGGGCGAGAAGCTGAGATATGACACTCCAGTCAATTCTGGAGGCTaGGAAGTCCAAGATCAAGGGGCCATATCTGGTGAGGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RGEKLRYDTPVNSGG*EVQDQGAISGEGLP
Trigger: AGGAAGACCCTCACCAGATATGGCCCCTTGATCTTGGACTTCCCAGCCTCCAGAATTGACTGGAGTGTCATATCTCAGCTTCTCGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000657231.1
ENST00000669659.1
CDS TCA 90 bp GCATCCTCCCAGTACTGCTGCATCGGGGATCAAGTTTCCAACACATaGACTTTGGGGGACGCATTCAAACCACAGCAGAGCCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: ASSQYCCIGDQVSNT*TLGDAFKPQQSLFS
Trigger: AGAGAAGAGGCTCTGCTGTGGTTTGAATGCGTCCCCCAAAGTTCATGTGTTGGAAACTTGATCCCCGATGCAGCAGTACTGGGAGGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000419243.5
ENST00000427045.5
ENST00000439734.5
ENST00000657231.1
CDS TCA 90 bp CAATTCTGGAGGCTGGGAAGTCCAAGATCAAGGGGCCATATCTGGTaGGGGTCTTCCTGCAGGATCATAACATGGCAAAGGGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: QFWRLGSPRSRGHIW*GSSCRIITWQRASS
Trigger: AGAGGATGCCCTTTGCCATGTTATGATCCTGCAGGAAGACCCTCACCAGATATGGCCCCTTGATCTTGGACTTCCCAGCCTCCAGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS TCA 90 bp CAATTCTGGAGGCTGGGAAGTCCAAGATCAAGGGGCCATATCTGGTaGGGGTCTTCCTGCAGGATCATAACATGGCAAAGGGCATCCTAT +
Preference number: 5 (lower is better)
Translates to: QFWRLGSPRSRGHIW*GSSCRIITWQRASY
Trigger: ATAGGATGCCCTTTGCCATGTTATGATCCTGCAGGAAGACCCTCACCAGATATGGCCCCTTGATCTTGGACTTCCCAGCCTCCAGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000656508.1
ENST00000657450.1
ENST00000663879.1
ENST00000664879.1
CDS GCA 90 bp TGGGTGTCTGACTCTAAATCCAGTACTCTTTTCTCCCTGCACTGCTaGTTCCTGCTTCTTGGGCTGACCCTCTCCAGTTTCATCTCTTGG +
Preference number: 5 (lower is better)
Translates to: WVSDSKSSTLFSLHC*FLLLGLTLSSFISW
Trigger: CCAAGAGATGAAACTGGAGAGGGTCAGCCCAAGAAGCAGGAAGCAGCAGTGCAGGGAGAAAAGAGTACTGGATTTAGAGTCAGACACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427045.5
ENST00000656508.1
CDS GCA 90 bp TGGGTGTCTGACTCTAAATCCAGTACTCTTTTCTCCCTGCACTGCTaGTTCCTGCTTCTTGGGCTGACCCTGAAATATTGCAGTAGCCTC +
Preference number: 5 (lower is better)
Translates to: WVSDSKSSTLFSLHC*FLLLGLTLKYCSSL
Trigger: GAGGCTACTGCAATATTTCAGGGTCAGCCCAAGAAGCAGGAAGCAGCAGTGCAGGGAGAAAAGAGTACTGGATTTAGAGTCAGACACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000657231.1
ENST00000664879.1
CDS GCA 90 bp ACCTGGGTGTCTGACTCTAAATCCAGTACTCTTTTCTCCCTGCACTaGTGCTTCCTGCTTCTTGGGCTGACCCTGAAATATTGCAGTAGC +
Preference number: 5 (lower is better)
Translates to: TWVSDSKSSTLFSLH*CFLLLGLTLKYCSS
Trigger: GCTACTGCAATATTTCAGGGTCAGCCCAAGAAGCAGGAAGCAGCAGTGCAGGGAGAAAAGAGTACTGGATTTAGAGTCAGACACCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000657231.1
ENST00000664879.1
CDS TCA 90 bp TCCTTCCTGCTGGCAGGAATAAGACTAAACATCAGACATCTATCTTaGACCGTGAGGAAGAAGCCACTCACTGAGGATGATGGAGCCACA +
Preference number: 5 (lower is better)
Translates to: SFLLAGIRLNIRHLS*TVRKKPLTEDDGAT
Trigger: TGTGGCTCCATCATCCTCAGTGAGTGGCTTCTTCCTCACGGTTCAAGATAGATGTCTGATGTTTAGTCTTATTCCTGCCAGCAGGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS TCA 90 bp CCAGGTGATGAAGATGCCCCTTCCGTTAGGAGACAATATCTAAGATaGGGCTTGATAGAGAAGTGGGAGTTAGCCAGGAAAGAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: PGDEDAPSVRRQYLR*GLIEKWELARKERA
Trigger: GGCTCTTTCTTTCCTGGCTAACTCCCACTTCTCTATCAAGCCTCATCTTAGATATTGTCTCCTAACGGAAGGGGCATCTTCATCACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS GCA 90 bp ACTCTGTCTCAAAACAGGAGGTTGGGGGTGGGTATGCCATTCTTCTaGTCTTCCTTCCTGCTGGCAGGAATAAGACTAAACATCAGACAT +
Preference number: 5 (lower is better)
Translates to: TLSQNRRLGVGMPFF*SSFLLAGIRLNIRH
Trigger: ATGTCTGATGTTTAGTCTTATTCCTGCCAGCAGGAAGGAAGAGCAGAAGAATGGCATACCCACCCCCAACCTCCTGTTTTGAGACAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS TCA 90 bp CGAGATAACAAACCCACTCCTGCAATAACAGCATTAATCCATTCATaGGGGCAGGGTCCTCATGACTTAAACACCTCTCAAAGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: RDNKPTPAITALIHS*GQGPHDLNTSQRSH
Trigger: GTGGGACCTTTGAGAGGTGTTTAAGTCATGAGGACCCTGCCCTCATGAATGGATTAATGCTGTTATTGCAGGAGTGGGTTTGTTATCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000656508.1
ENST00000657450.1
ENST00000663879.1
ENST00000664879.1
CDS TCA 90 bp GCTGCAGTGAGCTATGATCACTATACTCTAGCATGGACAATAAAGTaGGACTCTGTCTCAAAACAGGAGGTTGGGGGTGGGTATGCCATT +
Preference number: 5 (lower is better)
Translates to: AAVSYDHYTLAWTIK*DSVSKQEVGGGYAI
Trigger: AATGGCATACCCACCCCCAACCTCCTGTTTTGAGACAGAGTCTCACTTTATTGTCCATGCTAGAGTATAGTGATCATAGCTCACTGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS GCA 90 bp AAAGAGTTGCCTCTGGCTATAAGAAACTTAGAAGCTGCTGGGTTGTaGTTCCTTAACCCTCATACTGCTATTCACACCAAACTTGGGCAC +
Preference number: 5 (lower is better)
Translates to: KELPLAIRNLEAAGL*FLNPHTAIHTKLGH
Trigger: GTGCCCAAGTTTGGTGTGAATAGCAGTATGAGGGTTAAGGAAGCACAACCCAGCAGCTTCTAAGTTTCTTATAGCCAGAGGCAACTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000657450.1
ENST00000664879.1
CDS CCA 90 bp TCCCCTCTCTGCAGCCAGGTGATGCTGTCTTGCAATAGAGTCCTTTaGCTTTTTCTGGATACCATAAGTTTACCAGTAGATGTGATGATG +
Preference number: 5 (lower is better)
Translates to: SPLCSQVMLSCNRVL*LFLDTISLPVDVMM
Trigger: CATCATCACATCTACTGGTAAACTTATGGTATCCAGAAAAAGCCAAAGGACTCTATTGCAAGACAGCATCACCTGGCTGCAGAGAGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000664879.1
CDS CCA 90 bp AGGTGTAAACTAAGTAGGAACCATTTAGAAAGCGACCTGTCTTTGTaGCACCTTGAACACAGGGATAAGGAAAGAGGTGGCTTCATCTGG +
Preference number: 5 (lower is better)
Translates to: RCKLSRNHLESDLSL*HLEHRDKERGGFIW
Trigger: CCAGATGAAGCCACCTCTTTCCTTATCCCTGTGTTCAAGGTGCCACAAAGACAGGTCGCTTTCTAAATGGTTCCTACTTAGTTTACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS GCA 90 bp GCCAGGTCACAAACAGCCACAGTTAATGTTCTTCAAATCAGCAAGTaGATTTTTAGCTTCAAGTCTCATTCATGCCATTTCCTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: ARSQTATVNVLQISK*IFSFKSHSCHFLPG
Trigger: GCCTGGGAGGAAATGGCATGAATGAGACTTGAAGCTAAAAATGCACTTGCTGATTTGAAGAACATTAACTGTGGCTGTTTGTGACCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439734.5
ENST00000656508.1
ENST00000664879.1
CDS TCA 90 bp AAATCAAGCTGGGAAGACTGCTTCTATGAACTGCAAACTAGAACTTaGACCTGGGTGTCTGACTCTAAATCCAGTACTCTTTTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: KSSWEDCFYELQTRT*TWVSDSKSSTLFSL
Trigger: CAGGGAGAAAAGAGTACTGGATTTAGAGTCAGACACCCAGGTTCAAGTTCTAGTTTGCAGTTCATAGAAGCAGTCTTCCCAGCTTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000419243.5
ENST00000427045.5
ENST00000439734.5
ENST00000656508.1
ENST00000657231.1
ENST00000663879.1
CDS CCA 90 bp GTAAGTCTCTGCAGCCAGGTGATGCTGTCTTGCAATAGAGTCCTTTaGCTTTTTCTGGATACCATAAGTTTACCAGTAGATGTGATGATG +
Preference number: 5 (lower is better)
Translates to: VSLCSQVMLSCNRVL*LFLDTISLPVDVMM
Trigger: CATCATCACATCTACTGGTAAACTTATGGTATCCAGAAAAAGCCAAAGGACTCTATTGCAAGACAGCATCACCTGGCTGCAGAGACTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439734.5
ENST00000453035.1
ENST00000656508.1
CDS CCA 90 bp AGCAGATACATTTCCATAGACTTGGGCTGGGCTGAGAAATCTACCTaGATGCATGGGGGTGAATCAAATGACATCTCAGTAATTTATTTC +
Preference number: 5 (lower is better)
Translates to: SRYISIDLGWAEKST*MHGGESNDISVIYF
Trigger: GAAATAAATTACTGAGATGTCATTTGATTCACCCCCATGCATCCAGGTAGATTTCTCAGCCCAGCCCAAGTCTATGGAAATGTATCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655676.1
CDS TCA 90 bp CAAGAGGACACCATCCCTCTCCTAGGCCAGAAGGGTCATTATATGTaGTTTGAAAATCCATTGAGTTTGGATAAATTGTTTGAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: QEDTIPLLGQKGHYM*FENPLSLDKLFEKG
Trigger: ACCCTTCTCAAACAATTTATCCAAACTCAATGGATTTTCAAATCACATATAATGACCCTTCTGGCCTAGGAGAGGGATGGTGTCCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439734.5
ENST00000656508.1
ENST00000657450.1
ENST00000664879.1
CDS TCA 90 bp CTTTACTTTACCAATTCCCTGATGACCATTATTTTGTCTACTCAGTaGCATTCTTCCTTCTTCCAGCCTCAGAATGCAGCTTTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LYFTNSLMTIILSTQ*HSSFFQPQNAAFLQ
Trigger: CTGAAGGAAAGCTGCATTCTGAGGCTGGAAGAAGGAAGAATGTCACTGAGTAGACAAAATAATGGTCATCAGGGAATTGGTAAAGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS CCA 90 bp GAAAATAGAAATTCACTGACCAGCAAGGTCTGGCAAACATTAGAATaGGCCATAGAAATGGAGACTTCCGGTTGTCTCTCAATATCTGTT +
Preference number: 5 (lower is better)
Translates to: ENRNSLTSKVWQTLE*AIEMETSGCLSISV
Trigger: AACAGATATTGAGAGACAACCGGAAGTCTCCATTTCTATGGCCCATTCTAATGTTTGCCAGACCTTGCTGGTCAGTGAATTTCTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS CCA 90 bp AAGTTTCTAAGGGGGCTATCTTACAGTTCTTCTGTGCCATGGTTATaGCATGTGCCCACATCTGCTCATCTATTTACCTTACTAAAAAGA +
Preference number: 5 (lower is better)
Translates to: KFLRGLSYSSSVPWL*HVPTSAHLFTLLKR
Trigger: TCTTTTTAGTAAGGTAAATAGATGAGCAGATGTGGGCACATGCCATAACCATGGCACAGAAGAACTGTAAGATAGCCCCCTTAGAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000657231.1
CDS GCA 90 bp GTTCTCTCTTCCTCCTTAGTAGCAGAACCCATGATTTTTAAACCATaGACATTCCTCAGTTTCTATTACTACTGGGTGCTATATGTGACT +
Preference number: 5 (lower is better)
Translates to: VLSSSLVAEPMIFKP*TFLSFYYYWVLYVT
Trigger: AGTCACATATAGCACCCAGTAGTAATAGAAACTGAGGAATGTGCATGGTTTAAAAATCATGGGTTCTGCTACTAAGGAGGAAGAGAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS GCA 90 bp TCAGTTCACATTTTGTCTTTGCGCACAACTTCCAGAACATCACTTTaGCATCTTGTAAATCGGTTTGCATTATTTGTGATAATACTTACC +
Preference number: 5 (lower is better)
Translates to: SVHILSLRTTSRTSL*HLVNRFALFVIILT
Trigger: GGTAAGTATTATCACAAATAATGCAAACCGATTTACAAGATGGCAAAGTGATGTTCTGGAAGTTGTGCGCAAAGACAAAATGTGAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439734.5
ENST00000656508.1
ENST00000657450.1
ENST00000664879.1
CDS GCA 90 bp ATGGTCAGAATTTCATTTTTAGAGCCCACCATCTCTCTTAGGCAATaGTCTCTCTTCATAAAGCTATATTTTCAACTTCCTCTAAACTAC +
Preference number: 5 (lower is better)
Translates to: MVRISFLEPTISLRQ*SLFIKLYFQLPLNY
Trigger: GTAGTTTAGAGGAAGTTGAAAATATAGCTTTATGAAGAGAGAGCATTGCCTAAGAGAGATGGTGGGCTCTAAAAATGAAATTCTGACCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657231.1
CDS GCA 72 bp GGGCTGTGTGGCTGTATTGTGAGCCCACCTCGGCCGTaGCTGCTGGGTGCCCGTAGGCAGCTCTCTCATCTG +
Preference number: 6 (lower is better)
Translates to: GLCGCIVSPPRP*LLGARRQLSHL
Trigger: CAGATGAGAGAGCTGCCTACGGGCACCCAGCAGGCACGGCCGAGGTGGGCTCACAATACAGCCACACAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS TCA 72 bp CTAGTGAGGGAGCACTTGGGCTGTGTGGCTGTATTGTaGGCCCACCTCGGCCGTGCCTGCTGGGTGCCCGTA +
Preference number: 6 (lower is better)
Translates to: LVREHLGCVAVL*AHLGRACWVPV
Trigger: TACGGGCACCCAGCAGGCACGGCCGAGGTGGGCTCACAATACAGCCACACAGCCCAAGTGCTCCCTCACTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS GCA 72 bp GGGGCTGAGAGAGTCCAACTTCTGCAAGGCCTCCTGTaGCCTGGGGAGTGTGGACTGCACCTTGTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: GAERVQLLQGLL*PGECGLHLVGQ
Trigger: CTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTTGCAGAAGTTGGACTCTCTCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS CCA 72 bp CCAACTTCTGCAAGGCCTCCTGTGCCCTGGGGAGTGTaGACTGCACCTTGTGGGCCAGAGGGTTTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: PTSARPPVPWGV*TAPCGPEGLGG
Trigger: GCCTCCCAAACCCTCTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTTGCAGAAGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS CAA 72 bp AAGGCCTCCTGTGCCCTGGGGAGTGTGGACTGCACCTaGTGGGCCAGAGGGTTTGGGAGGCAATGGGGAGCA +
Preference number: 6 (lower is better)
Translates to: KASCALGSVDCT*WARGFGRQWGA
Trigger: TGCTCCCCATTGCCTCCCAAACCCTCTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS CAA 90 bp AACTTCTGCAAGGCCTCCTGTGCCCTGGGGAGTGTGGACTGCACCTaGTGGGCCAGAGGGTTTGGGAGGCAATGGGGAGCAGGAGAGGTG +
Preference number: 6 (lower is better)
Translates to: NFCKASCALGSVDCT*WARGFGRQWGAGEV
Trigger: CACCTCTCCTGCTCCCCATTGCCTCCCAAACCCTCTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTTGCAGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS GCA 72 bp TTCTGCAAGGCCTCCTGTGCCCTGGGGAGTGTGGACTaGACCTTGTGGGCCAGAGGGTTTGGGAGGCAATGG +
Preference number: 6 (lower is better)
Translates to: FCKASCALGSVD*TLWARGFGRQW
Trigger: CCATTGCCTCCCAAACCCTCTGGCCCACAAGGTGCAGTCCACACTCCCCAGGGCACAGGAGGCCTTGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS CCA 72 bp AAGCCAGAGGGCAAGGGAGCCAGCCCCTGGGTAATCTaGTTTCTGGACAGCCTCGTGGAGACAGGCATATGG +
Preference number: 6 (lower is better)
Translates to: KPEGKGASPWVI*FLDSLVETGIW
Trigger: CCATATGCCTGTCTCCACGAGGCTGTCCAGAAACCAGATTACCCAGGGGCTGGCTCCCTTGCCCTCTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453035.1
CDS GCA 72 bp TCTTCCAGCCTCAGAATGCAGCTTTCCTTCAGTGGCTaGCCTGTGACCTCCTGCTCTGACACCTGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: SSSLRMQLSFSG*PVTSCSDTCSL
Trigger: GAGGGAGCAGGTGTCAGAGCAGGAGGTCACAGGGCAGCCACTGAAGGAAAGCTGCATTCTGAGGCTGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS GCA 72 bp ATGCAGCTTTCCTTCAGTGGCTGCCCTGTGACCTCCTaGTCTGACACCTGCTCCCTCTTAGGGTTTTCATAC +
Preference number: 6 (lower is better)
Translates to: MQLSFSGCPVTS*SDTCSLLGFSY
Trigger: GTATGAAAACCCTAAGAGGGAGCAGGTGTCAGAGCAGGAGGTCACAGGGCAGCCACTGAAGGAAAGCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS CCA 72 bp GGATTAATCTATAGCAGGGTGGTCACAGTTCATGCCTaGAGAACCACTCACAGGCAACCCTTGGCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: GLIYSRVVTVHA*RTTHRQPLAAR
Trigger: CCTGGCTGCCAAGGGTTGCCTGTGAGTGGTTCTCCAGGCATGAACTGTGACCACCCTGCTATAGATTAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439734.5
ENST00000656508.1
ENST00000657450.1
ENST00000664879.1
CDS CCA 72 bp TGGGCTCATGTCACTACTGAGCCCCTCCAGACTCCATaGTATGCCCATCCCCAGGTTTCTGTGTATCCCAAA +
Preference number: 6 (lower is better)
Translates to: WAHVTTEPLQTP*YAHPQVSVYPK
Trigger: TTTGGGATACACAGAAACCTGGGGATGGGCATACCATGGAGTCTGGAGGGGCTCAGTAGTGACATGAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000657450.1
ENST00000664879.1
CDS CCA 72 bp GAGGCTGAAGCAAAGGTGTATCTTGATCCCATCCCATaGGCTCATGTCACTACTGAGCCCCTCCAGACTCCA +
Preference number: 6 (lower is better)
Translates to: EAEAKVYLDPIP*AHVTTEPLQTP
Trigger: TGGAGTCTGGAGGGGCTCAGTAGTGACATGAGCCCATGGGATGGGATCAAGATACACCTTTGCTTCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000657450.1
ENST00000664879.1
CDS CCA 72 bp GGAGCCACACTCAAAAGGACCAAGACAGAAGGACGATaGAGTCATTATACCAGCTCCGGACTGCTGAGCTCC +
Preference number: 6 (lower is better)
Translates to: GATLKRTKTEGR*SHYTSSGLLSS
Trigger: GGAGCTCAGCAGTCCGGAGCTGGTATAATGACTCCATCGTCCTTCTGTCTTGGTCCTTTTGAGTGTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000655676.1
ENST00000657231.1
ENST00000657450.1
ENST00000664879.1
ENST00000669659.1
CDS CCA 72 bp CCATATAGAACAGGTGAGTCTGGATTGGCAGGTGCTTaGGTGGAGGGGCTGAGAGAGTCCAACTTCTGCAAG +
Preference number: 6 (lower is better)
Translates to: PYRTGESGLAGA*VEGLRESNFCK
Trigger: CTTGCAGAAGTTGGACTCTCTCAGCCCCTCCACCCAAGCACCTGCCAATCCAGACTCACCTGTTCTATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS CAA 72 bp AGTCATTATACCAGCTCCGGACTGCTGAGCTCCAGATaGCCAGGCATATGGAGATCAAGGGGCGAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: SHYTSSGLLSSR*PGIWRSRGEKL
Trigger: CAGCTTCTCGCCCCTTGATCTCCATATGCCTGGCAATCTGGAGCTCAGCAGTCCGGAGCTGGTATAATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000657231.1
ENST00000669659.1
CDS TCA 72 bp AGGCTGGGAAGTCCAAGATCAAGGGGCCATATCTGGTaGGGGTCTTCCTGCAGGATCATAACATGGCAAAGG +
Preference number: 6 (lower is better)
Translates to: RLGSPRSRGHIW*GSSCRIITWQR
Trigger: CCTTTGCCATGTTATGATCCTGCAGGAAGACCCTCACCAGATATGGCCCCTTGATCTTGGACTTCCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000419243.5
ENST00000427045.5
ENST00000439734.5
ENST00000656508.1
ENST00000657231.1
ENST00000657450.1
ENST00000663879.1
ENST00000664879.1
ENST00000669659.1
CDS TCA 72 bp GATTGCCAGGCATATGGAGATCAAGGGGCGAGAAGCTaGGATATGACACTCCAGTCAATTCTGGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: DCQAYGDQGARS*DMTLQSILEAG
Trigger: CCCAGCCTCCAGAATTGACTGGAGTGTCATATCTCAGCTTCTCGCCCCTTGATCTCCATATGCCTGGCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000657231.1
ENST00000669659.1
CDS GCA 72 bp TTCAGTGGCTGCCCTGTGACCTCCTGCTCTGACACCTaGTCCCTCTTAGGGTTTTCATACCTGATGGTACAT +
Preference number: 6 (lower is better)
Translates to: FSGCPVTSCSDT*SLLGFSYLMVH
Trigger: ATGTACCATCAGGTATGAAAACCCTAAGAGGGAGCAGGTGTCAGAGCAGGAGGTCACAGGGCAGCCACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS GCA 72 bp AGACTCTGTCTCAAAACAGGAGGTTGGGGGTGGGTATaGCATTCTTCTGCTCTTCCTTCCTGCTGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: RLCLKTGGWGWV*HSSALPSCWQE
Trigger: TTCCTGCCAGCAGGAAGGAAGAGCAGAAGAATGGCATACCCACCCCCAACCTCCTGTTTTGAGACAGAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS CCA 72 bp CTGCTTCTTGGGCTGACCCTCTCCAGTTTCATCTCTTaGGCTCCTCATCTCTGTGTCTCTCTAGATGGCGAA +
Preference number: 6 (lower is better)
Translates to: LLLGLTLSSFIS*APHLCVSLDGE
Trigger: TTCGCCATCTAGAGAGACACAGAGATGAGGAGCCCAAGAGATGAAACTGGAGAGGGTCAGCCCAAGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427045.5
CDS TCA 72 bp CAGTACTGCTGCATCGGGGATCAAGTTTCCAACACATaGACTTTGGGGGACGCATTCAAACCACAGCAGAGC +
Preference number: 6 (lower is better)
Translates to: QYCCIGDQVSNT*TLGDAFKPQQS
Trigger: GCTCTGCTGTGGTTTGAATGCGTCCCCCAAAGTTCATGTGTTGGAAACTTGATCCCCGATGCAGCAGTACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000419243.5
ENST00000427045.5
ENST00000439734.5
ENST00000656508.1
ENST00000657231.1
ENST00000657450.1
ENST00000663879.1
ENST00000664879.1
CDS GCA 72 bp TCTGACTCTAAATCCAGTACTCTTTTCTCCCTGCACTaGTGCTTCCTGCTTCTTGGGCTGACCCTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: SDSKSSTLFSLH*CFLLLGLTLSS
Trigger: ACTGGAGAGGGTCAGCCCAAGAAGCAGGAAGCAGCAGTGCAGGGAGAAAAGAGTACTGGATTTAGAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427045.5
ENST00000656508.1
CDS GCA 72 bp GGAAAGAAAGAGCCCTTCAGACGGAGGAAAAGCAGGTaGTCCCCATATAGAACAGGTGAGTCTGGATTGGCA +
Preference number: 6 (lower is better)
Translates to: GKKEPFRRRKSR*SPYRTGESGLA
Trigger: TGCCAATCCAGACTCACCTGTTCTATATGGGGAGCACCTGCTTTTCCTCCGTCTGAAGGGCTCTTTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS CCA 72 bp AAAGTGAGACTCTGTCTCAAAACAGGAGGTTGGGGGTaGGTATGCCATTCTTCTGCTCTTCCTTCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: KVRLCLKTGGWG*VCHSSALPSCW
Trigger: CCAGCAGGAAGGAAGAGCAGAAGAATGGCATACCCACCCCCAACCTCCTGTTTTGAGACAGAGTCTCACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS GCA 72 bp CAAAACAGGAGGTTGGGGGTGGGTATGCCATTCTTCTaGTCTTCCTTCCTGCTGGCAGGAATAAGACTAAAC +
Preference number: 6 (lower is better)
Translates to: QNRRLGVGMPFF*SSFLLAGIRLN
Trigger: GTTTAGTCTTATTCCTGCCAGCAGGAAGGAAGAGCAGAAGAATGGCATACCCACCCCCAACCTCCTGTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS CCA 72 bp AAGCTGAGATATGACACTCCAGTCAATTCTGGAGGCTaGGAAGTCCAAGATCAAGGGGCCATATCTGGTGAG +
Preference number: 6 (lower is better)
Translates to: KLRYDTPVNSGG*EVQDQGAISGE
Trigger: CTCACCAGATATGGCCCCTTGATCTTGGACTTCCCAGCCTCCAGAATTGACTGGAGTGTCATATCTCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000657231.1
ENST00000669659.1
CDS CAA 72 bp GTTGACACAGAGGATGCCAGACCAGGGATCAAAGAGTaGCCTCTGGCTATAAGAAACTTAGAAGCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: VDTEDARPGIKE*PLAIRNLEAAG
Trigger: CCCAGCAGCTTCTAAGTTTCTTATAGCCAGAGGCAACTCTTTGATCCCTGGTCTGGCATCCTCTGTGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000657450.1
ENST00000664879.1
CDS CAA 72 bp AGTCATTATACCAGCTCCGGACTGCTGAGCTCCAGATaGCCTTGTGCTACCTGTGATTTCTGCAGCACTGAT +
Preference number: 6 (lower is better)
Translates to: SHYTSSGLLSSR*PCATCDFCSTD
Trigger: ATCAGTGCTGCAGAAATCACAGGTAGCACAAGGCAATCTGGAGCTCAGCAGTCCGGAGCTGGTATAATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS TCA 72 bp AACAGCATTAATCCATTCATGAGGGCAGGGTCCTCATaGCTTAAACACCTCTCAAAGGTCCCACCTCCCAGT +
Preference number: 6 (lower is better)
Translates to: NSINPFMRAGSS*LKHLSKVPPPS
Trigger: ACTGGGAGGTGGGACCTTTGAGAGGTGTTTAAGTCATGAGGACCCTGCCCTCATGAATGGATTAATGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000656508.1
ENST00000657450.1
ENST00000663879.1
ENST00000664879.1
CDS TCA 72 bp GATTTCTGCAGCACTGATCTCAGCCTTCATTCTTCTTaGCCTACATGGCTCATTCATGGGGTTGTCTCCCCT +
Preference number: 6 (lower is better)
Translates to: DFCSTDLSLHSS*PTWLIHGVVSP
Trigger: AGGGGAGACAACCCCATGAATGAGCCATGTAGGTCAAGAAGAATGAAGGCTGAGATCAGTGCTGCAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS TCA 72 bp TTCAGACGACTTCTCACTGGGTTCAGTGTACGGCAATaGAATGCAAATCATAAACGATGCGAGCTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: FRRLLTGFSVRQ*NANHKRCELAS
Trigger: GGAGGCCAGCTCGCATCGTTTATGATTTGCATTTCATTGCCGTACACTGAACCCAGTGAGAAGTCGTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS GCA 72 bp TCTGACTCTAAATCCAGTACTCTTTTCTCCCTGCACTaGTGCTTCCTGCTTCTTGGGCTGACCCTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: SDSKSSTLFSLH*CFLLLGLTLPF
Trigger: AAAAGGAAGGGTCAGCCCAAGAAGCAGGAAGCAGCAGTGCAGGGAGAAAAGAGTACTGGATTTAGAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419243.5
ENST00000439734.5
ENST00000657450.1
ENST00000663879.1
CDS GCA 72 bp CTTCTTTGCCAAGAGAAGATGCTTCATCATCCCAGCTaGTGCTGGAGATGTTCTGCTCTCCAGTTTCATCTC +
Preference number: 6 (lower is better)
Translates to: LLCQEKMLHHPS*CWRCSALQFHL
Trigger: GAGATGAAACTGGAGAGCAGAACATCTCCAGCAGCAGCTGGGATGATGAAGCATCTTCTCTTGGCAAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664879.1
CDS CCA 72 bp CCTGTTATCTCTCCCTTTCCACCTTCAATGTCCAGGTaGTACCTATTATTGGCTGAGTCCAACCAGAAGCCA +
Preference number: 6 (lower is better)
Translates to: PVISPFPPSMSR*YLLLAESNQKP
Trigger: TGGCTTCTGGTTGGACTCAGCCAATAATAGGTACCACCTGGACATTGAAGGTGGAAAGGGAGAGATAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453035.1
CDS CAA 90 bp GACATAATTGTTGACACAGAGGATGCCAGACCAGGGATCAAAGAGTaGCCTCTGGCTATAAGAAACTTAGAAGCTGCTGGGTTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: DIIVDTEDARPGIKE*PLAIRNLEAAGLCF
Trigger: GAAGCACAACCCAGCAGCTTCTAAGTTTCTTATAGCCAGAGGCAACTCTTTGATCCCTGGTCTGGCATCCTCTGTGTCAACAATTATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000657450.1
ENST00000664879.1
CDS TCA 72 bp CATGGCTCATTCATGGGGTTGTCTCCCCTCTCCTTATaGAAAGTCTTCTCACTTGAGCTGTCATGGCATTGT +
Preference number: 6 (lower is better)
Translates to: HGSFMGLSPLSL*KVFSLELSWHC
Trigger: ACAATGCCATGACAGCTCAAGTGAGAAGACTTTTCATAAGGAGAGGGGAGACAACCCCATGAATGAGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS GCA 72 bp TCTGACTCTAAATCCAGTACTCTTTTCTCCCTGCACTaGTGCTTCCTGCTTCTTGGGCTGACCCTGAAATAT +
Preference number: 6 (lower is better)
Translates to: SDSKSSTLFSLH*CFLLLGLTLKY
Trigger: ATATTTCAGGGTCAGCCCAAGAAGCAGGAAGCAGCAGTGCAGGGAGAAAAGAGTACTGGATTTAGAGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000657231.1
ENST00000664879.1
CDS CAA 90 bp CTGGGTTGTGCTTCCTTAACCCTCATACTGCTATTCACACCAAACTaGGGCACTTACCAGAATCTCCTCTCTCTATCCCTTTTCTTTGCT +
Preference number: 6 (lower is better)
Translates to: LGCASLTLILLFTPN*GTYQNLLSLSLFFA
Trigger: AGCAAAGAAAAGGGATAGAGAGAGGAGATTCTGGTAAGTGCCCAAGTTTGGTGTGAATAGCAGTATGAGGGTTAAGGAAGCACAACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000657450.1
ENST00000664879.1
CDS CAA 90 bp CTCAGGTGTAAACTAAGTAGGAACCATTTAGAAAGCGACCTGTCTTaGTGGCACCTTGAACACAGGGATAAGGAAAGAGGTGGCTTCATC +
Preference number: 6 (lower is better)
Translates to: LRCKLSRNHLESDLS*WHLEHRDKERGGFI
Trigger: GATGAAGCCACCTCTTTCCTTATCCCTGTGTTCAAGGTGCCACAAAGACAGGTCGCTTTCTAAATGGTTCCTACTTAGTTTACACCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS GCA 72 bp ATCAGCAAGTGCATTTTTAGCTTCAAGTCTCATTCATaGCATTTCCTCCCAGGCATATGGAGATCAAGGGGC +
Preference number: 6 (lower is better)
Translates to: ISKCIFSFKSHS*HFLPGIWRSRG
Trigger: GCCCCTTGATCTCCATATGCCTGGGAGGAAATGGCATGAATGAGACTTGAAGCTAAAAATGCACTTGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439734.5
ENST00000656508.1
ENST00000664879.1
CDS GCA 72 bp TCTCTGATTTTGGTGTTCTTCTTTGCCAAGAGAAGATaGTTCATCATCCCAGCTGCTGCTGGAGATGTTCTG +
Preference number: 6 (lower is better)
Translates to: SLILVFFFAKRR*FIIPAAAGDVL
Trigger: CAGAACATCTCCAGCAGCAGCTGGGATGATGAAGCATCTTCTCTTGGCAAAGAAGAACACCAAAATCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000657231.1
ENST00000664879.1
CDS CCA 72 bp AATTCACTGACCAGCAAGGTCTGGCAAACATTAGAATaGGCCATAGAAATGGAGACTTCCGGTTGTCTCTCA +
Preference number: 6 (lower is better)
Translates to: NSLTSKVWQTLE*AIEMETSGCLS
Trigger: TGAGAGACAACCGGAAGTCTCCATTTCTATGGCCCATTCTAATGTTTGCCAGACCTTGCTGGTCAGTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS CCA 72 bp AGCTGTGTGGCAGGGGTCTGCCTAGTCCTGATTGCTTaGTTTTATTCTGTAACACAAAGTGAAAGCTGTCAA +
Preference number: 6 (lower is better)
Translates to: SCVAGVCLVLIA*FYSVTQSESCQ
Trigger: TTGACAGCTTTCACTTTGTGTTACAGAATAAAACCAAGCAATCAGGACTAGGCAGACCCCTGCCACACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657231.1
CDS CCA 72 bp ATTTCCATAGACTTGGGCTGGGCTGAGAAATCTACCTaGATGCATGGGGGTGAATCAAATGACATCTCAGTA +
Preference number: 6 (lower is better)
Translates to: ISIDLGWAEKST*MHGGESNDISV
Trigger: TACTGAGATGTCATTTGATTCACCCCCATGCATCCAGGTAGATTTCTCAGCCCAGCCCAAGTCTATGGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655676.1
CDS CAA 72 bp GCTTCCTTAACCCTCATACTGCTATTCACACCAAACTaGGGCACTTACCAGAATCTCCTCTCTCTATCCCTT +
Preference number: 6 (lower is better)
Translates to: ASLTLILLFTPN*GTYQNLLSLSL
Trigger: AAGGGATAGAGAGAGGAGATTCTGGTAAGTGCCCAAGTTTGGTGTGAATAGCAGTATGAGGGTTAAGGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000657450.1
ENST00000664879.1
CDS CAA 72 bp TTGCCTCTGGCTATAAGAAACTTAGAAGCTGCTGGGTaGTGCTTCCTTAACCCTCATACTGCTATTCACACC +
Preference number: 6 (lower is better)
Translates to: LPLAIRNLEAAG*CFLNPHTAIHT
Trigger: GGTGTGAATAGCAGTATGAGGGTTAAGGAAGCACAACCCAGCAGCTTCTAAGTTTCTTATAGCCAGAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000657450.1
ENST00000664879.1
CDS CAA 72 bp CAGAATCCAGAGGGACGAAGGGCAGTTCCTGTAGAATaGGTGCAAAGTATAAAACTTCCCTGGAGAGATTCT +
Preference number: 6 (lower is better)
Translates to: QNPEGRRAVPVE*VQSIKLPWRDS
Trigger: AGAATCTCTCCAGGGAAGTTTTATACTTTGCACCAATTCTACAGGAACTGCCCTTCGTCCCTCTGGATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS CAA 90 bp ATCAAAGAGTTGCCTCTGGCTATAAGAAACTTAGAAGCTGCTGGGTaGTGCTTCCTTAACCCTCATACTGCTATTCACACCAAACTTGGG +
Preference number: 6 (lower is better)
Translates to: IKELPLAIRNLEAAG*CFLNPHTAIHTKLG
Trigger: CCCAAGTTTGGTGTGAATAGCAGTATGAGGGTTAAGGAAGCACAACCCAGCAGCTTCTAAGTTTCTTATAGCCAGAGGCAACTCTTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000657450.1
ENST00000664879.1
CDS TCA 72 bp CAGTTTTCAGGAATGTTGAAGAGGGGACATAATTGTTaGCACAGAGGATGCCAGACCAGGGATCAAAGAGTT +
Preference number: 6 (lower is better)
Translates to: QFSGMLKRGHNC*HRGCQTRDQRV
Trigger: AACTCTTTGATCCCTGGTCTGGCATCCTCTGTGTCAACAATTATGTCCCCTCTTCAACATTCCTGAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000657450.1
ENST00000664879.1
CDS TCA 72 bp CTGGCAGGAATAAGACTAAACATCAGACATCTATCTTaGACCGTGAGGAAGAAGCCACTCACTGAGGATGAT +
Preference number: 6 (lower is better)
Translates to: LAGIRLNIRHLS*TVRKKPLTEDD
Trigger: ATCATCCTCAGTGAGTGGCTTCTTCCTCACGGTTCAAGATAGATGTCTGATGTTTAGTCTTATTCCTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS CAA 72 bp CCCTGGAGAGATTCTAGTAAATTCCCTTCCCTCCACTaGATCCTTTTGACTACCTTCCTTGGTAATGGAAGT +
Preference number: 6 (lower is better)
Translates to: PWRDSSKFPSLH*ILLTTFLGNGS
Trigger: ACTTCCATTACCAAGGAAGGTAGTCAAAAGGATCAAGTGGAGGGAAGGGAATTTACTAGAATCTCTCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS TCA 72 bp TGGGAAGACTGCTTCTATGAACTGCAAACTAGAACTTaGACCTGGGTGTCTGACTCTAAATCCAGTACTCTT +
Preference number: 6 (lower is better)
Translates to: WEDCFYELQTRT*TWVSDSKSSTL
Trigger: AAGAGTACTGGATTTAGAGTCAGACACCCAGGTTCAAGTTCTAGTTTGCAGTTCATAGAAGCAGTCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419243.5
ENST00000427045.5
ENST00000439734.5
ENST00000656508.1
ENST00000657231.1
ENST00000663879.1
CDS TCA 72 bp TTTGATAAAGTCATAAGGGACTTACCTTCTTCACCATaGGTAAAGGAGCCTGTCTCAGTCTGCTTTGTGCAG +
Preference number: 6 (lower is better)
Translates to: FDKVIRDLPSSP*VKEPVSVCFVQ
Trigger: CTGCACAAAGCAGACTGAGACAGGCTCCTTTACTCATGGTGAAGAAGGTAAGTCCCTTATGACTTTATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419243.5
ENST00000427045.5
ENST00000439734.5
ENST00000656508.1
ENST00000657450.1
ENST00000664879.1
CDS TCA 72 bp GTTGTCTCCCCTCTCCTTATGAAAAGTCTTCTCACTTaGGCTGTCATGGCATTGTACTGTCTTGATTCTTCT +
Preference number: 6 (lower is better)
Translates to: VVSPLLMKSLLT*AVMALYCLDSS
Trigger: AGAAGAATCAAGACAGTACAATGCCATGACAGCTCAAGTGAGAAGACTTTTCATAAGGAGAGGGGAGACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS GCA 72 bp ATCAGCAAGTGCATTTTTAGCTTCAAGTCTCATTCATaGCATTTCCTCCCTGTTATCTCTCCCTTTCCACCT +
Preference number: 6 (lower is better)
Translates to: ISKCIFSFKSHS*HFLPVISPFPP
Trigger: AGGTGGAAAGGGAGAGATAACAGGGAGGAAATGGCATGAATGAGACTTGAAGCTAAAAATGCACTTGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453035.1
CDS CCA 72 bp TGCAGCCAGGTGATGCTGTCTTGCAATAGAGTCCTTTaGCTTTTTCTGGATACCATAAGTTTACCAGTAGAT +
Preference number: 6 (lower is better)
Translates to: CSQVMLSCNRVL*LFLDTISLPVD
Trigger: ATCTACTGGTAAACTTATGGTATCCAGAAAAAGCCAAAGGACTCTATTGCAAGACAGCATCACCTGGCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439734.5
ENST00000453035.1
ENST00000656508.1
ENST00000664879.1
CDS CAA 72 bp GATTCTAGTAAATTCCCTTCCCTCCACTTGATCCTTTaGACTACCTTCCTTGGTAATGGAAGTCATGGAAGG +
Preference number: 6 (lower is better)
Translates to: DSSKFPSLHLIL*TTFLGNGSHGR
Trigger: CCTTCCATGACTTCCATTACCAAGGAAGGTAGTCAAAAGGATCAAGTGGAGGGAAGGGAATTTACTAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS CAA 90 bp GCTTTTTCTGGATACCATAAGTTTACCAGTAGATGTGATGATGGGTaGTCCTTTCCAGCCAGGTCACAAACAGCCACAGTTAATGTTCTT +
Preference number: 6 (lower is better)
Translates to: AFSGYHKFTSRCDDG*SFPARSQTATVNVL
Trigger: AAGAACATTAACTGTGGCTGTTTGTGACCTGGCTGGAAAGGACAACCCATCATCACATCTACTGGTAAACTTATGGTATCCAGAAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439734.5
ENST00000453035.1
ENST00000656508.1
ENST00000664879.1
CDS CAA 90 bp ATAAAACTTCCCTGGAGAGATTCTAGTAAATTCCCTTCCCTCCACTaGATCCTTTTGACTACCTTCCTTGGTAATGGAAGTCATGGAAGG +
Preference number: 6 (lower is better)
Translates to: IKLPWRDSSKFPSLH*ILLTTFLGNGSHGR
Trigger: CCTTCCATGACTTCCATTACCAAGGAAGGTAGTCAAAAGGATCAAGTGGAGGGAAGGGAATTTACTAGAATCTCTCCAGGGAAGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS CAA 90 bp ACATCATGTCAGAATCCAGAGGGACGAAGGGCAGTTCCTGTAGAATaGGTGCAAAGTATAAAACTTCCCTGGAGAGATTCTAGTAAATTC +
Preference number: 6 (lower is better)
Translates to: TSCQNPEGRRAVPVE*VQSIKLPWRDSSKF
Trigger: GAATTTACTAGAATCTCTCCAGGGAAGTTTTATACTTTGCACCAATTCTACAGGAACTGCCCTTCGTCCCTCTGGATTCTGACATGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS TCA 72 bp GATGATCAAAACAGTGAGTTCAGTTGTGTCATACTCTaGTTATTGGCTGGTGGGTTAGTGGTCCAATTGAGT +
Preference number: 6 (lower is better)
Translates to: DDQNSEFSCVIL*LLAGGLVVQLS
Trigger: ACTCAATTGGACCACTAACCCACCAGCCAATAATCAGAGTATGACACAACTGAACTCACTGTTTTGATCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS CAA 72 bp AACATTAGAATGGGCCATAGAAATGGAGACTTCCGGTaGTCTCTCAATATCTGTTCTCTCTTCCTCCTTAGT +
Preference number: 6 (lower is better)
Translates to: NIRMGHRNGDFR*SLNICSLFLLS
Trigger: ACTAAGGAGGAAGAGAGAACAGATATTGAGAGACAACCGGAAGTCTCCATTTCTATGGCCCATTCTAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000655676.1
ENST00000657450.1
ENST00000664879.1
CDS CAA 72 bp CGACTCTGTTTTGTTTGTCTTTCGACATATTTCTGTTaGTCCTCGATTCAATGGTTACCTCACAATCATGCC +
Preference number: 6 (lower is better)
Translates to: RLCFVCLSTYFC*SSIQWLPHNHA
Trigger: GGCATGATTGTGAGGTAACCATTGAATCGAGGACAAACAGAAATATGTCGAAAGACAAACAAAACAGAGTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657231.1
CDS CAA 72 bp CCAACCTTTTGTAAACCCAAAGCGACTCTGTTTTGTTaGTCTTTCGACATATTTCTGTTTGTCCTCGATTCA +
Preference number: 6 (lower is better)
Translates to: PTFCKPKATLFC*SFDIFLFVLDS
Trigger: TGAATCGAGGACAAACAGAAATATGTCGAAAGACAAACAAAACAGAGTCGCTTTGGGTTTACAAAAGGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657231.1
CDS TCA 72 bp AAACATGCACCTTCTAGAGTTTTTGTGAGGACTCAATaGATCAGTCCATGCAAAATGAATAAGATAGTGCCT +
Preference number: 6 (lower is better)
Translates to: KHAPSRVFVRTQ*ISPCKMNKIVP
Trigger: AGGCACTATCTTATTCATTTTGCATGGACTGATTCATTGAGTCCTCACAAAAACTCTAGAAGGTGCATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS GCA 72 bp TTCTTCTGTGCCATGGTTATGGCATGTGCCCACATCTaGTCATCTATTTACCTTACTAAAAAGATAATCTAT +
Preference number: 6 (lower is better)
Translates to: FFCAMVMACAHI*SSIYLTKKIIY
Trigger: ATAGATTATCTTTTTAGTAAGGTAAATAGATGAGCAGATGTGGGCACATGCCATAACCATGGCACAGAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657231.1
CDS GCA 72 bp CAAACTCTTTCCGTAGTATGTATAAGGATGATCATGTaGAGGACAGGACGAATGAGTTTCCTTTTCTTATAT +
Preference number: 6 (lower is better)
Translates to: QTLSVVCIRMIM*RTGRMSFLFLY
Trigger: ATATAAGAAAAGGAAACTCATTCGTCCTGTCCTGCACATGATCATCCTTATACATACTACGGAAAGAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669659.1
CDS CAA 72 bp CATTTTGTCTTTGCGCACAACTTCCAGAACATCACTTaGCCATCTTGTAAATCGGTTTGCATTATTTGTGAT +
Preference number: 6 (lower is better)
Translates to: HFVFAHNFQNIT*PSCKSVCIICD
Trigger: ATCACAAATAATGCAAACCGATTTACAAGATGGCAAAGTGATGTTCTGGAAGTTGTGCGCAAAGACAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439734.5
ENST00000656508.1
ENST00000657450.1
ENST00000664879.1
CDS CAA 90 bp TTCAGTTCACATTTTGTCTTTGCGCACAACTTCCAGAACATCACTTaGCCATCTTGTAAATCGGTTTGCATTATTTGTGATAATACTTAC +
Preference number: 6 (lower is better)
Translates to: FSSHFVFAHNFQNIT*PSCKSVCIICDNTY
Trigger: GTAAGTATTATCACAAATAATGCAAACCGATTTACAAGATGGCAAAGTGATGTTCTGGAAGTTGTGCGCAAAGACAAAATGTGAACTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439734.5
ENST00000656508.1
ENST00000657450.1
ENST00000664879.1
CDS GCA 72 bp ATTTTGTCTTTGCGCACAACTTCCAGAACATCACTTTaGCATCTTGTAAATCGGTTTGCATTATTTGTGATA +
Preference number: 6 (lower is better)
Translates to: ILSLRTTSRTSL*HLVNRFALFVI
Trigger: TATCACAAATAATGCAAACCGATTTACAAGATGGCAAAGTGATGTTCTGGAAGTTGTGCGCAAAGACAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439734.5
ENST00000656508.1
ENST00000657450.1
ENST00000664879.1
CDS CAA 72 bp CTAAACTACTTTTCAAATCTTCTTAGTCTTAAGGCCTaGGATATATGCTGGACTCTGACCAAAACTCAACAT +
Preference number: 6 (lower is better)
Translates to: LNYFSNLLSLKA*DICWTLTKTQH
Trigger: ATGTTGAGTTTTGGTCAGAGTCCAGCATATATCCAAGGCCTTAAGACTAAGAAGATTTGAAAAGTAGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657231.1
CDS TCA 72 bp TTCTTAGTCTTAAGGCCTTGGATATATGCTGGACTCTaGCCAAAACTCAACATCTTATATATTAGTTATTCC +
Preference number: 6 (lower is better)
Translates to: FLVLRPWIYAGL*PKLNILYISYS
Trigger: GGAATAACTAATATATAAGATGTTGAGTTTTGGTCAGAGTCCAGCATATATCCAAGGCCTTAAGACTAAGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657231.1
CDS TCA 72 bp TCACATGGAATTATAAATTCAACTGTGAATTTCCTGTaGACGCATGGACTGTATGAGTTTGTTTCTGTATTC +
Preference number: 6 (lower is better)
Translates to: SHGIINSTVNFL*THGLYEFVSVF
Trigger: GAATACAGAAACAAACTCATACAGTCCATGCGTTCACAGGAAATTCACAGTTGAATTTATAATTCCATGTGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655676.1