Pregenerated sensors for LINC01876 (Homo sapiens)
Ensembl gene IDs: ENSG00000226383Ensembl transcript IDs: ENST00000428651.2, ENST00000448255.5, ENST00000635799.1, ENST00000636956.1, ENST00000637324.1, ENST00000637476.1, ENST00000637554.1, ENST00000637665.1, ENST00000638047.1, ENST00000657334.1, ENST00000659502.1, ENST00000661513.1, ENST00000662073.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCAAGAGTGCTGATCAGTTGGGTCGGAGATAAAATCATAGGGAGTTaGAGCTGTCCTCTTGCGCTGAGTCAGTTCCTGGGTTGGGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: SRVLISWVGDKIIGS*SCPLALSQFLGWVP Trigger: TGGCACCCAACCCAGGAACTGACTCAGCGCAAGAGGACAGCTTCAACTCCCTATGATTTTATCTCCGACCCAACTGATCAGCACTCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448255.5 ENST00000635799.1 |
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| CDS TCA 90 bp | CCACAAGATCAGATGAGCCAGTTTATCCATCTGGGTGGTGCCAGCTaGTCCATCAAGTTCAGGGTCTGCACAATATCTCAAGCACTGATC | + |
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Preference number: 5 (lower is better) Translates to: PQDQMSQFIHLGGAS*SIKFRVCTISQALI Trigger: GATCAGTGCTTGAGATATTGTGCAGACCCTGAACTTGATGGATCAGCTGGCACCACCCAGATGGATAAACTGGCTCATCTGATCTTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448255.5 ENST00000635799.1 |
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| CDS CCA 90 bp | TCTTCTTCCATCCCTGCATTATGTAAGAAGACCATTCTTATTCACTaGAAAATCGGGTCACTCCCACCCGAATACTGCGCTTTTCCGACC | + |
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Preference number: 5 (lower is better) Translates to: SSSIPALCKKTILIH*KIGSLPPEYCAFPT Trigger: GGTCGGAAAAGCGCAGTATTCGGGTGGGAGTGACCCGATTTTCCAGTGAATAAGAATGGTCTTCTTACATAATGCAGGGATGGAAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000637665.1 ENST00000661513.1 ENST00000662073.1 |
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| CDS TCA 90 bp | CTGGCACGGATTTCTGTGCAAGAGAGCACATATTCTCCATCCTGGTaGAATGCCTTGTACTGGCTAAAGTGCAAACCAAATTTCCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: LARISVQESTYSPSW*NALYWLKCKPNFLH Trigger: ATGCAGGAAATTTGGTTTGCACTTTAGCCAGTACAAGGCATTTCACCAGGATGGAGAATATGTGCTCTCTTGCACAGAAATCCGTGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000428651.2 ENST00000638047.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 ENST00000662073.1 |
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| CDS GCA 90 bp | TTCACTAAATCCTTCCACATCACTTACTGCTGGCACGGATTTCTGTaGAAGAGAGCACATATTCTCCATCCTGGTGAAATGCCTTGTACT | + |
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Preference number: 5 (lower is better) Translates to: FTKSFHITYCWHGFL*KRAHILHPGEMPCT Trigger: AGTACAAGGCATTTCACCAGGATGGAGAATATGTGCTCTCTTGCACAGAAATCCGTGCCAGCAGTAAGTGATGTGGAAGGATTTAGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000428651.2 ENST00000638047.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 ENST00000662073.1 |
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| CDS CCA 90 bp | GTGCCTCTCCTCATCTTATCACCTATAACCCTACACTCAATTTCCTaGTCCAACCCTCTACTAGATCTGACTCATAAGGGATTAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: VPLLILSPITLHSIS*SNPLLDLTHKGLRR Trigger: TCTCCTTAATCCCTTATGAGTCAGATCTAGTAGAGGGTTGGACCAGGAAATTGAGTGTAGGGTTATAGGTGATAAGATGAGGAGAGGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000428651.2 ENST00000638047.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 ENST00000662073.1 |
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| CDS TCA 90 bp | CCAGGTCACAGCAACTCTGATTTACTGAGGGTACTGATACCAAATTaGGGGCAACCTGAAGCAACACTCATTCCAATTCATTTCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: PGHSNSDLLRVLIPN*GQPEATLIPIHFQF Trigger: AAACTGGAAATGAATTGGAATGAGTGTTGCTTCAGGTTGCCCTCAATTTGGTATCAGTACCCTCAGTAAATCAGAGTTGCTGTGACCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000428651.2 ENST00000638047.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 ENST00000662073.1 |
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| CDS TCA 90 bp | ACAACAGAACAAGATTCTTTTTACTCTATGCCTTCTAATGCCTTCTaGACTATGTCCTGTGTGGAAGCATTGCCCAGGAATGCAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: TTEQDSFYSMPSNAF*TMSCVEALPRNAKL Trigger: CAGCTTTGCATTCCTGGGCAATGCTTCCACACAGGACATAGTTCAGAAGGCATTAGAAGGCATAGAGTAAAAAGAATCTTGTTCTGTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000638047.1 |
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| CDS TCA 90 bp | AGACCATTCTTATTCACTTTTTACTCTATGCCTTCTAATGCCTTCTaGACTATGTCCTGTGTGGAAGCATTGCCCAGGAATGCAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: RPFLFTFYSMPSNAF*TMSCVEALPRNAKL Trigger: CAGCTTTGCATTCCTGGGCAATGCTTCCACACAGGACATAGTTCAGAAGGCATTAGAAGGCATAGAGTAAAAAGTGAATAAGAATGGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000636956.1 ENST00000659502.1 |
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| CDS GCA 90 bp | GGTATATTTGTCAGTAGACTCAGGCTCAGGAATCTTTTTACTCTATaGCTTCTAATGCCTTCTGAACTATGTCCTGTGTGGAAGCATTGC | + |
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Preference number: 5 (lower is better) Translates to: GIFVSRLRLRNLFTL*LLMPSELCPVWKHC Trigger: GCAATGCTTCCACACAGGACATAGTTCAGAAGGCATTAGAAGGCATAGAGTAAAAAGATTCCTGAGCCTGAGTCTACTGACAAATATACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637554.1 |
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| CDS GCA 90 bp | ACTGCACTCCAGCCTAAACAACAGAACAAGATTCTTTTTACTCTATaGCTTCTAATGCCTTCTGAACTATGTCCTGTGTGGAAGCATTGC | + |
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Preference number: 5 (lower is better) Translates to: TALQPKQQNKILFTL*LLMPSELCPVWKHC Trigger: GCAATGCTTCCACACAGGACATAGTTCAGAAGGCATTAGAAGGCATAGAGTAAAAAGAATCTTGTTCTGTTGTTTAGGCTGGAGTGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000638047.1 |
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| CDS GCA 90 bp | TTTATTGGGGACCTACTCTCGACCATCATTATACTAGTTTTACATTaGACTGTTTCATTTATATCCCATAGTATAGGAACCCAAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: FIGDLLSTIIILVLH*TVSFISHSIGTQEE Trigger: TTCTTCTTGGGTTCCTATACTATGGGATATAAATGAAACAGTGCAATGTAAAACTAGTATAATGATGGTCGAGAGTAGGTCCCCAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000428651.2 ENST00000638047.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 ENST00000662073.1 |
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| CDS TCA 72 bp | CCTGGCTCGGAGGGTCCTACTCACAGGGAGTCTCGCTaGTTGCTAGCACAGCAGTCTGAGATCAAACTGCAA | + |
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Preference number: 6 (lower is better) Translates to: PGSEGPTHRESR*LLAQQSEIKLQ Trigger: TTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGACTCCCTGTGAGTAGGACCCTCCGAGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000428651.2 ENST00000636956.1 ENST00000637554.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 |
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| CDS TCA 72 bp | GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCATCTCTGGAAAATCGGGTCACTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: EVRRSRPSWLTR*NPISGKSGHSH Trigger: GTGGGAGTGACCCGATTTTCCAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637324.1 |
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| CDS TCA 72 bp | GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCATCTCTACTGGAAAATCGGGTCACTCC | + |
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Preference number: 6 (lower is better) Translates to: EVRRSRPSWLTR*NPISTGKSGHS Trigger: GGAGTGACCCGATTTTCCAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637476.1 |
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| CDS CAA 90 bp | CATAGGGAGTTGAAGCTGTCCTCTTGCGCTGAGTCAGTTCCTGGGTaGGGTGCCACAAGATCAGATGAGCCAGTTTATCCATCTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: HRELKLSSCAESVPG*GATRSDEPVYPSGW Trigger: CCACCCAGATGGATAAACTGGCTCATCTGATCTTGTGGCACCCAACCCAGGAACTGACTCAGCGCAAGAGGACAGCTTCAACTCCCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448255.5 ENST00000635799.1 |
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| CDS CCA 72 bp | GCCACAAGATCAGATGAGCCAGTTTATCCATCTGGGTaGTGCCAGCTGATCCATCAAGTTCAGGGTCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: ATRSDEPVYPSG*CQLIHQVQGLH Trigger: GTGCAGACCCTGAACTTGATGGATCAGCTGGCACCACCCAGATGGATAAACTGGCTCATCTGATCTTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448255.5 ENST00000635799.1 |
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| CDS CAA 72 bp | TTGAAGCTGTCCTCTTGCGCTGAGTCAGTTCCTGGGTaGGGTGCCACAAGATCAGATGAGCCAGTTTATCCA | + |
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Preference number: 6 (lower is better) Translates to: LKLSSCAESVPG*GATRSDEPVYP Trigger: TGGATAAACTGGCTCATCTGATCTTGTGGCACCCAACCCAGGAACTGACTCAGCGCAAGAGGACAGCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448255.5 ENST00000635799.1 |
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| CDS TCA 72 bp | CTGATCAGTTGGGTCGGAGATAAAATCATAGGGAGTTaGAGCTGTCCTCTTGCGCTGAGTCAGTTCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LISWVGDKIIGS*SCPLALSQFLG Trigger: ACCCAGGAACTGACTCAGCGCAAGAGGACAGCTTCAACTCCCTATGATTTTATCTCCGACCCAACTGATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448255.5 ENST00000635799.1 |
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| CDS TCA 72 bp | CAGATGAGCCAGTTTATCCATCTGGGTGGTGCCAGCTaGTCCATCAAGTTCAGGGTCTGCACAATATCTCAA | + |
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Preference number: 6 (lower is better) Translates to: QMSQFIHLGGAS*SIKFRVCTISQ Trigger: TTGAGATATTGTGCAGACCCTGAACTTGATGGATCAGCTGGCACCACCCAGATGGATAAACTGGCTCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448255.5 ENST00000635799.1 |
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| CDS GCA 72 bp | ACAAGATCAGATGAGCCAGTTTATCCATCTGGGTGGTaGCAGCTGATCCATCAAGTTCAGGGTCTGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: TRSDEPVYPSGW*QLIHQVQGLHN Trigger: ATTGTGCAGACCCTGAACTTGATGGATCAGCTGGCACCACCCAGATGGATAAACTGGCTCATCTGATCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448255.5 ENST00000635799.1 |
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| CDS CAA 72 bp | GCACTGATCTTGATTGCCAGGATCACCGGTCATGTCTaGCCCTTCCCCACTAGTATTTATCCATCCTACACA | + |
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Preference number: 6 (lower is better) Translates to: ALILIARITGHV*PFPTSIYPSYT Trigger: TGTGTAGGATGGATAAATACTAGTGGGGAAGGGCAAGACATGACCGGTGATCCTGGCAATCAAGATCAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448255.5 |
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| CDS CAA 72 bp | AAGTTCAGGGTCTGCACAATATCTCAAGCACTGATCTaGATTGCCAGGATCACCGGTCATGTCTTGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: KFRVCTISQALI*IARITGHVLPF Trigger: GAAGGGCAAGACATGACCGGTGATCCTGGCAATCAAGATCAGTGCTTGAGATATTGTGCAGACCCTGAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448255.5 |
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| CDS CAA 90 bp | ATATCTCAAGCACTGATCTTGATTGCCAGGATCACCGGTCATGTCTaGCCCTTCCCCACTAGTATTTATCCATCCTACACACTGTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: ISQALILIARITGHV*PFPTSIYPSYTLWS Trigger: TGACCACAGTGTGTAGGATGGATAAATACTAGTGGGGAAGGGCAAGACATGACCGGTGATCCTGGCAATCAAGATCAGTGCTTGAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448255.5 |
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| CDS TCA 72 bp | GCTACCCTTACATCAAAGCCCAGGTCACAGCAACTCTaGTTTACTGAGGGTACTGATACCAAATTGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: ATLTSKPRSQQL*FTEGTDTKLRA Trigger: TGCCCTCAATTTGGTATCAGTACCCTCAGTAAATCAGAGTTGCTGTGACCTGGGCTTTGATGTAAGGGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000428651.2 ENST00000638047.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 ENST00000662073.1 |
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| CDS GCA 72 bp | TCCTTCCACATCACTTACTGCTGGCACGGATTTCTGTaGAAGAGAGCACATATTCTCCATCCTGGTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: SFHITYCWHGFL*KRAHILHPGEM Trigger: CATTTCACCAGGATGGAGAATATGTGCTCTCTTGCACAGAAATCCGTGCCAGCAGTAAGTGATGTGGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000428651.2 ENST00000638047.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 ENST00000662073.1 |
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| CDS CCA 72 bp | TGTCCTGTGTGGAAGCATTGCCCAGGAATGCAAAGCTaGTTCACTACTCAAAAATCAACCTGGAAAATCGGG | + |
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Preference number: 6 (lower is better) Translates to: CPVWKHCPGMQS*FTTQKSTWKIG Trigger: CCCGATTTTCCAGGTTGATTTTTGAGTAGTGAACCAGCTTTGCATTCCTGGGCAATGCTTCCACACAGGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000636956.1 ENST00000637554.1 ENST00000638047.1 ENST00000659502.1 |
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| CDS CCA 72 bp | CTATGCCTTCTAATGCCTTCTGAACTATGTCCTGTGTaGAAGCATTGCCCAGGAATGCAAAGCTGGTTCACT | + |
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Preference number: 6 (lower is better) Translates to: LCLLMPSELCPV*KHCPGMQSWFT Trigger: AGTGAACCAGCTTTGCATTCCTGGGCAATGCTTCCACACAGGACATAGTTCAGAAGGCATTAGAAGGCATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000636956.1 ENST00000637554.1 ENST00000638047.1 ENST00000659502.1 |
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| CDS TCA 72 bp | CCATCAAGTTCAGGGTCTGCACAATATCTCAAGCACTaGTCTGAAACAAGCCAAAGGCTATCACCAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PSSSGSAQYLKH*SETSQRLSPAS Trigger: TGAAGCTGGTGATAGCCTTTGGCTTGTTTCAGATCAGTGCTTGAGATATTGTGCAGACCCTGAACTTGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635799.1 |
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| CDS CCA 72 bp | CTATGCCTTCTAATGCCTTCTGAACTATGTCCTGTGTaGAAGCATTGCCTCTGTAATCTCAGCACTTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LCLLMPSELCPV*KHCLCNLSTLG Trigger: TCCCAAAGTGCTGAGATTACAGAGGCAATGCTTCCACACAGGACATAGTTCAGAAGGCATTAGAAGGCATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637476.1 |
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| CDS GCA 72 bp | CTAATGCCTTCTGAACTATGTCCTGTGTGGAAGCATTaGCCAGGAATGCAAAGCTGGTTCACTACTCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: LMPSELCPVWKH*PGMQSWFTTQK Trigger: TTTTTGAGTAGTGAACCAGCTTTGCATTCCTGGGCAATGCTTCCACACAGGACATAGTTCAGAAGGCATTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000636956.1 ENST00000637554.1 ENST00000638047.1 ENST00000659502.1 |
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| CDS GCA 72 bp | ATAAGGAACATGCTTGTGGGGACAATCTCCGCTAGATaGCAGCAAGACAATTTTAAGAGACTCCAACTTACT | + |
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Preference number: 6 (lower is better) Translates to: IRNMLVGTISAR*QQDNFKRLQLT Trigger: AGTAAGTTGGAGTCTCTTAAAATTGTCTTGCTGGCATCTAGCGGAGATTGTCCCCACAAGCATGTTCCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000428651.2 ENST00000448255.5 ENST00000635799.1 ENST00000636956.1 ENST00000637476.1 ENST00000637554.1 ENST00000637665.1 ENST00000638047.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 ENST00000662073.1 |
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| CDS GCA 72 bp | GTAGACTCAGGCTCAGGAATACACATCTTATACTCATaGCTTTGCTTGGACCTTATGATGAAAATCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VDSGSGIHILYS*LCLDLMMKIFP Trigger: GGGGAAGATTTTCATCATAAGGTCCAAGCAAAGGCATGAGTATAAGATGTGTATTCCTGAGCCTGAGTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000448255.5 ENST00000636956.1 ENST00000637665.1 |
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| CDS GCA 72 bp | GTCAGTAGACTCAGGCTCAGGAATATCTTATACTCATaGCTTTGCTTGGACCTTATGATGAAAATCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VSRLRLRNILYS*LCLDLMMKIFP Trigger: GGGGAAGATTTTCATCATAAGGTCCAAGCAAAGGCATGAGTATAAGATATTCCTGAGCCTGAGTCTACTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000635799.1 ENST00000637324.1 ENST00000637476.1 ENST00000657334.1 |
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| CDS CCA 72 bp | CTCATCTTATCACCTATAACCCTACACTCAATTTCCTaGTCCAACCCTCTACTAGATCTGACTCATAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LILSPITLHSIS*SNPLLDLTHKG Trigger: TCCCTTATGAGTCAGATCTAGTAGAGGGTTGGACCAGGAAATTGAGTGTAGGGTTATAGGTGATAAGATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000428651.2 ENST00000638047.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 ENST00000662073.1 |
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| CDS CCA 72 bp | TCCAAGTATCTTCTTCCATCCCCAGGAATGCAAAGCTaGTTCACTACTCAAAAATCAACCTGTAAGACAGAG | + |
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Preference number: 6 (lower is better) Translates to: SKYLLPSPGMQS*FTTQKSTCKTE Trigger: CTCTGTCTTACAGGTTGATTTTTGAGTAGTGAACCAGCTTTGCATTCCTGGGGATGGAAGAAGATACTTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637324.1 |
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| CDS TCA 72 bp | AGCAACTCTGATTTACTGAGGGTACTGATACCAAATTaGGGGCAACCTGAAGCAACACTCATTCCAATTCAT | + |
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Preference number: 6 (lower is better) Translates to: SNSDLLRVLIPN*GQPEATLIPIH Trigger: ATGAATTGGAATGAGTGTTGCTTCAGGTTGCCCTCAATTTGGTATCAGTACCCTCAGTAAATCAGAGTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000428651.2 ENST00000638047.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 ENST00000662073.1 |
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| CDS CAA 72 bp | CTCAGGCTCAGGAATACACATCTTATACTCATGCCTTaGCTTGGACCTTATGATGAAAATCTTCCCCGATTT | + |
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Preference number: 6 (lower is better) Translates to: LRLRNTHLILMP*LGPYDENLPRF Trigger: AAATCGGGGAAGATTTTCATCATAAGGTCCAAGCAAAGGCATGAGTATAAGATGTGTATTCCTGAGCCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000448255.5 ENST00000636956.1 ENST00000637665.1 |
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| CDS TCA 72 bp | TTTACTGAGGGTACTGATACCAAATTGAGGGCAACCTaGAGCAACACTCATTCCAATTCATTTCCAGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: FTEGTDTKLRAT*SNTHSNSFPVC Trigger: ACAAACTGGAAATGAATTGGAATGAGTGTTGCTTCAGGTTGCCCTCAATTTGGTATCAGTACCCTCAGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000428651.2 ENST00000638047.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 ENST00000662073.1 |
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| CDS GCA 72 bp | TCAGGCTCAGGAATACACATCTTATACTCATGCCTTTaGTTGGACCTTATGATGAAAATCTTCCCCGATTTT | + |
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Preference number: 6 (lower is better) Translates to: SGSGIHILYSCL*LDLMMKIFPDF Trigger: AAAATCGGGGAAGATTTTCATCATAAGGTCCAAGCAAAGGCATGAGTATAAGATGTGTATTCCTGAGCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000448255.5 ENST00000636956.1 ENST00000637665.1 |
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| CDS GCA 72 bp | AGACTCAGGCTCAGGAATATCTTATACTCATGCCTTTaGTTGGACCTTATGATGAAAATCTTCCCCGATTTT | + |
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Preference number: 6 (lower is better) Translates to: RLRLRNILYSCL*LDLMMKIFPDF Trigger: AAAATCGGGGAAGATTTTCATCATAAGGTCCAAGCAAAGGCATGAGTATAAGATATTCCTGAGCCTGAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000635799.1 ENST00000637324.1 ENST00000637476.1 ENST00000657334.1 |
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| CDS CAA 72 bp | CTATCTAATAGGAAAGTCGGAAATCATTCCCTCTATTaGCACTCAGAACAGAATTTCTTAAGCCTAACAGAA | + |
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Preference number: 6 (lower is better) Translates to: LSNRKVGNHSLY*HSEQNFLSLTE Trigger: TTCTGTTAGGCTTAAGAAATTCTGTTCTGAGTGCAAATAGAGGGAATGATTTCCGACTTTCCTATTAGATAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000428651.2 ENST00000638047.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 ENST00000662073.1 |
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| CDS CCA 72 bp | TCATTCTCTCCAATAACAGTAATAACCAAGATTTATTaGGGACCTACTCTCGACCATCATTATACTAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SFSPITVITKIY*GPTLDHHYTSF Trigger: AAAACTAGTATAATGATGGTCGAGAGTAGGTCCCCAATAAATCTTGGTTATTACTGTTATTGGAGAGAATGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000428651.2 ENST00000638047.1 ENST00000657334.1 ENST00000659502.1 ENST00000661513.1 ENST00000662073.1 |
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