Pregenerated sensors for LINC01869 (Homo sapiens)
Ensembl gene IDs: ENSG00000180279Ensembl transcript IDs: ENST00000326989.5, ENST00000593632.2, ENST00000634979.1, ENST00000635639.1, ENST00000651210.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAAGGCCCGGGGTGCGCTCGGAGTCAGCGTCTGAGTTCCGCTGTTTaGATGTCCGCCTCGCTGCGCCCTGCTGCACGGCCCACCCGCGGT | + |
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Preference number: 5 (lower is better) Translates to: EGPGCARSQRLSSAV*MSASLRPAARPTRG Trigger: ACCGCGGGTGGGCCGTGCAGCAGGGCGCAGCGAGGCGGACATCCAAACAGCGGAACTCAGACGCTGACTCCGAGCGCACCCCGGGCCTTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000651210.1 |
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| CDS GCA 90 bp | GGGACAAAGCCGCAAAGGGCGGGCCCTAGAGCGAGGGCTGGAGTTTaGCACCGGTCCCCTCGGAGGGCGTGGCCTGATATCAGGGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: GTKPQRAGPRARAGV*HRSPRRAWPDIRGW Trigger: CCACCCCCTGATATCAGGCCACGCCCTCCGAGGGGACCGGTGGCAAACTCCAGCCCTCGCTCTAGGGCCCGCCCTTTGCGGCTTTGTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 |
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| CDS CCA 90 bp | GAAGGCCCGGGGTGCGCTCGGAGTCAGCGTCTGAGTTCCGCTGTTTaGATGTCCGCCTCGCTGCGCCCGGAGTGCAGCATCAAGTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: EGPGCARSQRLSSAV*MSASLRPECSIKSL Trigger: CAGCGACTTGATGCTGCACTCCGGGCGCAGCGAGGCGGACATCCAAACAGCGGAACTCAGACGCTGACTCCGAGCGCACCCCGGGCCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635639.1 |
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| CDS CCA 90 bp | GCAGGGCCACACAAACTAGCCACACTGCCGAGCTCAGCGGGACGCTaGACAAGTGTCTGCAGAACGGGAGGGGATGCTGGGCCTCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: AGPHKLATLPSSAGR*TSVCRTGGDAGPLG Trigger: CCCCAGAGGCCCAGCATCCCCTCCCGTTCTGCAGACACTTGTCCAGCGTCCCGCTGAGCTCGGCAGTGTGGCTAGTTTGTGTGGCCCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 |
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| CDS GCA 90 bp | GGGCCCGTTCTGCAGAAGGGTGGAGTTGCACCAAATGCTGGGCGGTaGTGTGTCCACCTGGGGACAAGGGTGGACATCGGAGCTGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GPVLQKGGVAPNAGR*CVHLGTRVDIGAEA Trigger: GGCCTCAGCTCCGATGTCCACCCTTGTCCCCAGGTGGACACAGCACCGCCCAGCATTTGGTGCAACTCCACCCTTCTGCAGAACGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000634979.1 |
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| CDS CCA 90 bp | GACGCTGGACAAGTGTCTGCAGAACGGGAGGGGATGCTGGGCCTCTaGGGTGGAGGTACTGTGAGGACCCAGTGGGCAGGGACAAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: DAGQVSAEREGMLGL*GGGTVRTQWAGTKP Trigger: CGGCTTTGTCCCTGCCCACTGGGTCCTCACAGTACCTCCACCCCAGAGGCCCAGCATCCCCTCCCGTTCTGCAGACACTTGTCCAGCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 |
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| CDS CCA 90 bp | GAGGCCGGAACTCCGGGAAAGAAGTTCCATGCAGACCACCCTGGCTaGGCACCAGGGGCAGGGCCACACAAACTAGCCACACTGCCGAGC | + |
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Preference number: 5 (lower is better) Translates to: EAGTPGKKFHADHPG*APGAGPHKLATLPS Trigger: GCTCGGCAGTGTGGCTAGTTTGTGTGGCCCTGCCCCTGGTGCCCAGCCAGGGTGGTCTGCATGGAACTTCTTTCCCGGAGTTCCGGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000634979.1 |
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| CDS GCA 90 bp | GGTAGCTCAGCCGCCGCGCATTCAAGGGCTGCCCTCTGCTTCACATaGCCACTGGGCTTAGGTAGGACACGGCTCCGGAGTGCAGCATCA | + |
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Preference number: 5 (lower is better) Translates to: GSSAAAHSRAALCFT*PLGLGRTRLRSAAS Trigger: TGATGCTGCACTCCGGAGCCGTGTCCTACCTAAGCCCAGTGGGCATGTGAAGCAGAGGGCAGCCCTTGAATGCGCGGCGGCTGAGCTACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000651210.1 |
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| CDS CCA 90 bp | TTGCAAGCCATGCCTTCCCAGGGAGGGGCCCGTTCTGCAGAAGGGTaGAGTTGCACCAAATGCTGGGCGGTGCTGTGTCCACCTGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: LQAMPSQGGARSAEG*SCTKCWAVLCPPGD Trigger: GTCCCCAGGTGGACACAGCACCGCCCAGCATTTGGTGCAACTCCACCCTTCTGCAGAACGGGCCCCTCCCTGGGAAGGCATGGCTTGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000634979.1 |
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| CDS TCA 90 bp | GAAGGGGTTGGCCGGGCATCTGGCCATGGCTACCGGTCGGTGTCCTaGAGACCTCGGGTGCTATTCCTTGGAGGTGCTTGGGTCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: EGVGRASGHGYRSVS*RPRVLFLGGAWVSS Trigger: GGATGAGACCCAAGCACCTCCAAGGAATAGCACCCGAGGTCTTCAGGACACCGACCGGTAGCCATGGCCAGATGCCCGGCCAACCCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 ENST00000651210.1 |
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| CDS CCA 90 bp | AGAAGGGTGGAGTTGCACCAAATGCTGGGCGGTGCTGTGTCCACCTaGGGACAAGGGTGGACATCGGAGCTGAGGCCGGAACTCCGGGAA | + |
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Preference number: 5 (lower is better) Translates to: RRVELHQMLGGAVST*GQGWTSELRPELRE Trigger: TTCCCGGAGTTCCGGCCTCAGCTCCGATGTCCACCCTTGTCCCCAGGTGGACACAGCACCGCCCAGCATTTGGTGCAACTCCACCCTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000634979.1 |
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| CDS GCA 90 bp | CTTGGGTCTCATCCTCGAGGGTGTATGAAATGGGAAGGCCCGGGGTaGGCTCGGAGTCAGCGTCTGAGTTCCGCTGTTTGGATGTCCGCC | + |
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Preference number: 5 (lower is better) Translates to: LGSHPRGCMKWEGPG*ARSQRLSSAVWMSA Trigger: GGCGGACATCCAAACAGCGGAACTCAGACGCTGACTCCGAGCGCACCCCGGGCCTTCCCATTTCATACACCCTCGAGGATGAGACCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 ENST00000651210.1 |
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| CDS GCA 90 bp | GGGCATCTGGCCATGGCTACCGGTCGGTGTCCTGAAGACCTCGGGTaGTATTCCTTGGAGGTGCTTGGGTCTCATCCTCGAGGGTGTATG | + |
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Preference number: 5 (lower is better) Translates to: GHLAMATGRCPEDLG*YSLEVLGSHPRGCM Trigger: CATACACCCTCGAGGATGAGACCCAAGCACCTCCAAGGAATAGCACCCGAGGTCTTCAGGACACCGACCGGTAGCCATGGCCAGATGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 ENST00000651210.1 |
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| CDS GCA 90 bp | AGGGATGTTATTGCAAGCCATGCCTTCCCAGGGAGGGGCCCGTTCTaGAGAAGGGTGGAGTTGCACCAAATGCTGGGCGGTGCTGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: RDVIASHAFPGRGPF*RRVELHQMLGGAVS Trigger: GGACACAGCACCGCCCAGCATTTGGTGCAACTCCACCCTTCTGCAGAACGGGCCCCTCCCTGGGAAGGCATGGCTTGCAATAACATCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000634979.1 |
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| CDS CCA 90 bp | GTCCCAGCACAGGTAGGAGGTCACCAGGTAGGACACCACCGGACTTaGGTGCACCGCCTTGCCGTTAACAATGCCGAGGCAGAGGAAACT | + |
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Preference number: 5 (lower is better) Translates to: VPAQVGGHQVGHHRT*VHRLAVNNAEAEET Trigger: AGTTTCCTCTGCCTCGGCATTGTTAACGGCAAGGCGGTGCACCCAAGTCCGGTGGTGTCCTACCTGGTGACCTCCTACCTGTGCTGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634979.1 |
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| CDS CCA 90 bp | TATTCCTTGGAGGTGCTTGGGTCTCATCCTCGAGGGTGTATGAAATaGGAAGGCCCGGGGTGCGCTCGGAGTCAGCGTCTGAGTTCCGCT | + |
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Preference number: 5 (lower is better) Translates to: YSLEVLGSHPRGCMK*EGPGCARSQRLSSA Trigger: AGCGGAACTCAGACGCTGACTCCGAGCGCACCCCGGGCCTTCCCATTTCATACACCCTCGAGGATGAGACCCAAGCACCTCCAAGGAATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 ENST00000651210.1 |
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| CDS GCA 90 bp | GAACTCAACCAAAGTCCTCTAGACAACATGCAAAACCTCTCATTGTaGAGCTCCATTGAGATCAATTCTGGCAGGTATGAGGCAGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: ELNQSPLDNMQNLSL*SSIEINSGRYEAVP Trigger: GGGCACTGCCTCATACCTGCCAGAATTGATCTCAATGGAGCTGCACAATGAGAGGTTTTGCATGTTGTCTAGAGGACTTTGGTTGAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635639.1 |
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| CDS CAA 90 bp | GGAAGGCCCGGGGTGCGCTCGGAGTCAGCGTCTGAGTTCCGCTGTTaGGATGTCCGCCTCGCTGCGCCCTGCTGCACGGCCCACCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: GRPGVRSESASEFRC*DVRLAAPCCTAHPR Trigger: CCGCGGGTGGGCCGTGCAGCAGGGCGCAGCGAGGCGGACATCCAAACAGCGGAACTCAGACGCTGACTCCGAGCGCACCCCGGGCCTTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000651210.1 |
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| CDS GCA 72 bp | CCGCAAAGGGCGGGCCCTAGAGCGAGGGCTGGAGTTTaGCACCGGTCCCCTCGGAGGGCGTGGCCTGATATC | + |
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Preference number: 6 (lower is better) Translates to: PQRAGPRARAGV*HRSPRRAWPDI Trigger: GATATCAGGCCACGCCCTCCGAGGGGACCGGTGGCAAACTCCAGCCCTCGCTCTAGGGCCCGCCCTTTGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 |
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| CDS CCA 72 bp | GGGTGCGCTCGGAGTCAGCGTCTGAGTTCCGCTGTTTaGATGTCCGCCTCGCTGCGCCCTGCTGCACGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GCARSQRLSSAV*MSASLRPAARP Trigger: GGGCCGTGCAGCAGGGCGCAGCGAGGCGGACATCCAAACAGCGGAACTCAGACGCTGACTCCGAGCGCACCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000651210.1 |
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| CDS CAA 72 bp | GGGGTGCGCTCGGAGTCAGCGTCTGAGTTCCGCTGTTaGGATGTCCGCCTCGCTGCGCCCTGCTGCACGGCC | + |
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Preference number: 6 (lower is better) Translates to: GVRSESASEFRC*DVRLAAPCCTA Trigger: GGCCGTGCAGCAGGGCGCAGCGAGGCGGACATCCAAACAGCGGAACTCAGACGCTGACTCCGAGCGCACCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000651210.1 |
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| CDS CCA 72 bp | GGGTGCGCTCGGAGTCAGCGTCTGAGTTCCGCTGTTTaGATGTCCGCCTCGCTGCGCCCTGCGGAGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GCARSQRLSSAV*MSASLRPAECS Trigger: GCTGCACTCCGCAGGGCGCAGCGAGGCGGACATCCAAACAGCGGAACTCAGACGCTGACTCCGAGCGCACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000593632.2 ENST00000634979.1 |
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| CDS CCA 72 bp | CCGCCTCGCTGCGCCCGGAGTGCAGCATCAAGTCGCTaGCGTCCCAGCACAGGTAGGAGGTCACCAGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: PPRCARSAASSR*RPSTGRRSPGR Trigger: CCTACCTGGTGACCTCCTACCTGTGCTGGGACGCCAGCGACTTGATGCTGCACTCCGGGCGCAGCGAGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635639.1 |
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| CDS CAA 72 bp | GGGGTGCGCTCGGAGTCAGCGTCTGAGTTCCGCTGTTaGGATGTCCGCCTCGCTGCGCCCTGCGGAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GVRSESASEFRC*DVRLAAPCGVQ Trigger: CTGCACTCCGCAGGGCGCAGCGAGGCGGACATCCAAACAGCGGAACTCAGACGCTGACTCCGAGCGCACCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000593632.2 ENST00000634979.1 |
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| CDS CAA 90 bp | GGAAGGCCCGGGGTGCGCTCGGAGTCAGCGTCTGAGTTCCGCTGTTaGGATGTCCGCCTCGCTGCGCCCGGAGTGCAGCATCAAGTCGCT | + |
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Preference number: 6 (lower is better) Translates to: GRPGVRSESASEFRC*DVRLAAPGVQHQVA Trigger: AGCGACTTGATGCTGCACTCCGGGCGCAGCGAGGCGGACATCCAAACAGCGGAACTCAGACGCTGACTCCGAGCGCACCCCGGGCCTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635639.1 |
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| CDS TCA 72 bp | AATGGGAAGGCCCGGGGTGCGCTCGGAGTCAGCGTCTaGGTTCCGCTGTTTGGATGTCCGCCTCGCTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: NGKARGALGVSV*VPLFGCPPRCA Trigger: GGCGCAGCGAGGCGGACATCCAAACAGCGGAACTCAGACGCTGACTCCGAGCGCACCCCGGGCCTTCCCATT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 ENST00000651210.1 |
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| CDS TCA 72 bp | CTCAGGGGAGGTCGAATATCCAGGGCGTGGCCACGCTaGAGGGGTTGGCCGGGCATCTGGCCATGGCTACCG | + |
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Preference number: 6 (lower is better) Translates to: LRGGRISRAWPR*RGWPGIWPWLP Trigger: CGGTAGCCATGGCCAGATGCCCGGCCAACCCCTTCAGCGTGGCCACGCCCTGGATATTCGACCTCCCCTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 |
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| CDS CCA 72 bp | GGGTGCGCTCGGAGTCAGCGTCTGAGTTCCGCTGTTTaGATGTCCGCCTCGCTGCGCCCGGAGTGCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: GCARSQRLSSAV*MSASLRPECSI Trigger: GATGCTGCACTCCGGGCGCAGCGAGGCGGACATCCAAACAGCGGAACTCAGACGCTGACTCCGAGCGCACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635639.1 |
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| CDS CAA 72 bp | GGGGTGCGCTCGGAGTCAGCGTCTGAGTTCCGCTGTTaGGATGTCCGCCTCGCTGCGCCCGGAGTGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: GVRSESASEFRC*DVRLAAPGVQH Trigger: ATGCTGCACTCCGGGCGCAGCGAGGCGGACATCCAAACAGCGGAACTCAGACGCTGACTCCGAGCGCACCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635639.1 |
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| CDS CAA 90 bp | CCTCAGGGGAGGTCGAATATCCAGGGCGTGGCCACGCTGAAGGGGTaGGCCGGGCATCTGGCCATGGCTACCGGTCGGTGTCCTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: PQGRSNIQGVATLKG*AGHLAMATGRCPED Trigger: GTCTTCAGGACACCGACCGGTAGCCATGGCCAGATGCCCGGCCAACCCCTTCAGCGTGGCCACGCCCTGGATATTCGACCTCCCCTGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 |
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| CDS GCA 72 bp | GCCGCCGCGCATTCAAGGGCTGCCCTCTGCTTCACATaGCCACTGGGCTTAGGTAGGACACGGCTCCGGAGT | + |
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Preference number: 6 (lower is better) Translates to: AAAHSRAALCFT*PLGLGRTRLRS Trigger: ACTCCGGAGCCGTGTCCTACCTAAGCCCAGTGGGCATGTGAAGCAGAGGGCAGCCCTTGAATGCGCGGCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000651210.1 |
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| CDS GCA 72 bp | TCCCAGGGAGGGGCCCGTTCTGCAGAAGGGTGGAGTTaGACCAAATGCTGGGCGGTGCTGTGTCCACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SQGGARSAEGWS*TKCWAVLCPPG Trigger: CCCAGGTGGACACAGCACCGCCCAGCATTTGGTGCAACTCCACCCTTCTGCAGAACGGGCCCCTCCCTGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000634979.1 |
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| CDS CAA 72 bp | AGGTCGAATATCCAGGGCGTGGCCACGCTGAAGGGGTaGGCCGGGCATCTGGCCATGGCTACCGGTCGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RSNIQGVATLKG*AGHLAMATGRC Trigger: ACACCGACCGGTAGCCATGGCCAGATGCCCGGCCAACCCCTTCAGCGTGGCCACGCCCTGGATATTCGACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 ENST00000651210.1 |
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| CDS TCA 72 bp | GGCCGGGCATCTGGCCATGGCTACCGGTCGGTGTCCTaGAGACCTCGGGTGCTATTCCTTGGAGGTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GRASGHGYRSVS*RPRVLFLGGAW Trigger: CCAAGCACCTCCAAGGAATAGCACCCGAGGTCTTCAGGACACCGACCGGTAGCCATGGCCAGATGCCCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 ENST00000651210.1 |
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| CDS CCA 72 bp | GGTAGGACACGGCTCCGGAGTGCAGCATCAAGTCGCTaGCGTCCCAGCACAGGTAGGAGGTCACCAGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: GRTRLRSAASSR*RPSTGRRSPGR Trigger: CCTACCTGGTGACCTCCTACCTGTGCTGGGACGCCAGCGACTTGATGCTGCACTCCGGAGCCGTGTCCTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000651210.1 |
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| CDS CAA 72 bp | TTCCCAGGGAGGGGCCCGTTCTGCAGAAGGGTGGAGTaGCACCAAATGCTGGGCGGTGCTGTGTCCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: FPGRGPFCRRVE*HQMLGGAVSTW Trigger: CCAGGTGGACACAGCACCGCCCAGCATTTGGTGCAACTCCACCCTTCTGCAGAACGGGCCCCTCCCTGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000634979.1 |
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| CDS TCA 72 bp | CCTTGGAGGTGCTTGGGTCTCATCCTCGAGGGTGTATaGAATGGGAAGGCCCGGGGTGCGCTCGGAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PWRCLGLILEGV*NGKARGALGVS Trigger: GCTGACTCCGAGCGCACCCCGGGCCTTCCCATTTCATACACCCTCGAGGATGAGACCCAAGCACCTCCAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 ENST00000651210.1 |
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| CDS CCA 72 bp | GAGGTGCTTGGGTCTCATCCTCGAGGGTGTATGAAATaGGAAGGCCCGGGGTGCGCTCGGAGTCAGCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: EVLGSHPRGCMK*EGPGCARSQRL Trigger: CAGACGCTGACTCCGAGCGCACCCCGGGCCTTCCCATTTCATACACCCTCGAGGATGAGACCCAAGCACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 ENST00000651210.1 |
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| CDS CCA 72 bp | CACAAACTAGCCACACTGCCGAGCTCAGCGGGACGCTaGACAAGTGTCTGCAGAACGGGAGGGGATGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: HKLATLPSSAGR*TSVCRTGGDAG Trigger: CCCAGCATCCCCTCCCGTTCTGCAGACACTTGTCCAGCGTCCCGCTGAGCTCGGCAGTGTGGCTAGTTTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 |
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| CDS CCA 72 bp | GAGTTGCACCAAATGCTGGGCGGTGCTGTGTCCACCTaGGGACAAGGGTGGACATCGGAGCTGAGGCCGGAA | + |
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Preference number: 6 (lower is better) Translates to: ELHQMLGGAVST*GQGWTSELRPE Trigger: TTCCGGCCTCAGCTCCGATGTCCACCCTTGTCCCCAGGTGGACACAGCACCGCCCAGCATTTGGTGCAACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000634979.1 |
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| CDS CCA 72 bp | ATGCCTTCCCAGGGAGGGGCCCGTTCTGCAGAAGGGTaGAGTTGCACCAAATGCTGGGCGGTGCTGTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: MPSQGGARSAEG*SCTKCWAVLCP Trigger: TGGACACAGCACCGCCCAGCATTTGGTGCAACTCCACCCTTCTGCAGAACGGGCCCCTCCCTGGGAAGGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000634979.1 |
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| CDS GCA 72 bp | CATCCTCGAGGGTGTATGAAATGGGAAGGCCCGGGGTaGGCTCGGAGTCAGCGTCTGAGTTCCGCTGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: HPRGCMKWEGPG*ARSQRLSSAVW Trigger: CCAAACAGCGGAACTCAGACGCTGACTCCGAGCGCACCCCGGGCCTTCCCATTTCATACACCCTCGAGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 ENST00000651210.1 |
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| CDS GCA 72 bp | CTGCAGAAGGGTGGAGTTGCACCAAATGCTGGGCGGTaGTGTGTCCACCTGGGGACAAGGGTGGACATCGGA | + |
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Preference number: 6 (lower is better) Translates to: LQKGGVAPNAGR*CVHLGTRVDIG Trigger: TCCGATGTCCACCCTTGTCCCCAGGTGGACACAGCACCGCCCAGCATTTGGTGCAACTCCACCCTTCTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000634979.1 |
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| CDS GCA 72 bp | ATTGCAAGCCATGCCTTCCCAGGGAGGGGCCCGTTCTaGAGAAGGGTGGAGTTGCACCAAATGCTGGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: IASHAFPGRGPF*RRVELHQMLGG Trigger: ACCGCCCAGCATTTGGTGCAACTCCACCCTTCTGCAGAACGGGCCCCTCCCTGGGAAGGCATGGCTTGCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000634979.1 |
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| CDS CCA 72 bp | CAGGTAGGAGGTCACCAGGTAGGACACCACCGGACTTaGGTGCACCGCCTTGCCGTTAACAATGCCGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: QVGGHQVGHHRT*VHRLAVNNAEA Trigger: TGCCTCGGCATTGTTAACGGCAAGGCGGTGCACCCAAGTCCGGTGGTGTCCTACCTGGTGACCTCCTACCTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634979.1 |
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| CDS TCA 72 bp | CTGTGTCCACCTGGGGACAAGGGTGGACATCGGAGCTaGGGCCGGAACTCCGGGAAAGAAGTTCCATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LCPPGDKGGHRS*GRNSGKEVPCR Trigger: TCTGCATGGAACTTCTTTCCCGGAGTTCCGGCCTCAGCTCCGATGTCCACCCTTGTCCCCAGGTGGACACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326989.5 ENST00000634979.1 |
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| CDS GCA 72 bp | GCCATGGCTACCGGTCGGTGTCCTGAAGACCTCGGGTaGTATTCCTTGGAGGTGCTTGGGTCTCATCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: AMATGRCPEDLG*YSLEVLGSHPR Trigger: TCGAGGATGAGACCCAAGCACCTCCAAGGAATAGCACCCGAGGTCTTCAGGACACCGACCGGTAGCCATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 ENST00000651210.1 |
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| CDS CAA 72 bp | ACCGGTCGGTGTCCTGAAGACCTCGGGTGCTATTCCTaGGAGGTGCTTGGGTCTCATCCTCGAGGGTGTATG | + |
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Preference number: 6 (lower is better) Translates to: TGRCPEDLGCYS*EVLGSHPRGCM Trigger: CATACACCCTCGAGGATGAGACCCAAGCACCTCCAAGGAATAGCACCCGAGGTCTTCAGGACACCGACCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 ENST00000651210.1 |
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| CDS CAA 90 bp | GCCATGGCTACCGGTCGGTGTCCTGAAGACCTCGGGTGCTATTCCTaGGAGGTGCTTGGGTCTCATCCTCGAGGGTGTATGAAATGGGAA | + |
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Preference number: 6 (lower is better) Translates to: AMATGRCPEDLGCYS*EVLGSHPRGCMKWE Trigger: TTCCCATTTCATACACCCTCGAGGATGAGACCCAAGCACCTCCAAGGAATAGCACCCGAGGTCTTCAGGACACCGACCGGTAGCCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000326989.5 ENST00000593632.2 ENST00000634979.1 ENST00000635639.1 ENST00000651210.1 |
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| CDS CAA 72 bp | ACTCAGCACAGGGCCACGGCCAGTAACATGAAGCCCTaGCTCATATGGATGAGAACTGGGAGTCCCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: TQHRATASNMKP*LIWMRTGSPRR Trigger: TCTCCTGGGACTCCCAGTTCTCATCCATATGAGCAAGGGCTTCATGTTACTGGCCGTGGCCCTGTGCTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635639.1 |
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| CDS TCA 72 bp | CTCATATGGATGAGAACTGGGAGTCCCAGGAGAGTCTaGAGGCAAGTGTGCTCAGCTCTGAACTCAACCAAA | + |
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Preference number: 6 (lower is better) Translates to: LIWMRTGSPRRV*RQVCSALNSTK Trigger: TTTGGTTGAGTTCAGAGCTGAGCACACTTGCCTTCAGACTCTCCTGGGACTCCCAGTTCTCATCCATATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635639.1 |
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| CDS CAA 90 bp | TCTGAACTCAACCAAAGTCCTCTAGACAACATGCAAAACCTCTCATaGTGCAGCTCCATTGAGATCAATTCTGGCAGGTATGAGGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SELNQSPLDNMQNLS*CSSIEINSGRYEAV Trigger: CACTGCCTCATACCTGCCAGAATTGATCTCAATGGAGCTGCACAATGAGAGGTTTTGCATGTTGTCTAGAGGACTTTGGTTGAGTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635639.1 |
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| CDS GCA 72 bp | CAAAGTCCTCTAGACAACATGCAAAACCTCTCATTGTaGAGCTCCATTGAGATCAATTCTGGCAGGTATGAG | + |
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Preference number: 6 (lower is better) Translates to: QSPLDNMQNLSL*SSIEINSGRYE Trigger: CTCATACCTGCCAGAATTGATCTCAATGGAGCTGCACAATGAGAGGTTTTGCATGTTGTCTAGAGGACTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635639.1 |
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| CDS CAA 72 bp | AACCAAAGTCCTCTAGACAACATGCAAAACCTCTCATaGTGCAGCTCCATTGAGATCAATTCTGGCAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: NQSPLDNMQNLS*CSSIEINSGRY Trigger: ATACCTGCCAGAATTGATCTCAATGGAGCTGCACAATGAGAGGTTTTGCATGTTGTCTAGAGGACTTTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635639.1 |
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