Pregenerated sensors for LINC01865 (Homo sapiens)
Ensembl gene IDs: ENSG00000233684Ensembl transcript IDs: ENST00000430529.1, ENST00000436808.2
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACAGCTTTCTTCCTCTGGGGCCAGTGGAGTGAACGCTGCCATCCATaGTGCCGAGATTCATCTGTCCCAGGATCATCTGGGATGCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: TAFFLWGQWSERCHP*CRDSSVPGSSGMQP Trigger: AGGCTGCATCCCAGATGATCCTGGGACAGATGAATCTCGGCATCATGGATGGCAGCGTTCACTCCACTGGCCCCAGAGGAAGAAAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS CCA 90 bp | TTGGGGGCTCTAGAGTCCATCTGCTTCCTTCCCTTCTCCAGCATCTaGAGGTCACCTCATTTATTGGCTTGGGTCCCTGAACTGCATCAC | + |
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Preference number: 5 (lower is better) Translates to: LGALESICFLPFSSI*RSPHLLAWVPELHH Trigger: GTGATGCAGTTCAGGGACCCAAGCCAATAAATGAGGTGACCTCCAGATGCTGGAGAAGGGAAGGAAGCAGATGGACTCTAGAGCCCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS GCA 90 bp | GACAGGAGACAGACTCTCAGCTTCCGGTCCTTAGAAGCTCCCTTCTaGTTCCATATCCAGGTCATTGTCACACAGTACAAAGCCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: DRRQTLSFRSLEAPF*FHIQVIVTQYKASA Trigger: GGCAGAGGCTTTGTACTGTGTGACAATGACCTGGATATGGAAGCAGAAGGGAGCTTCTAAGGACCGGAAGCTGAGAGTCTGTCTCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS CCA 90 bp | TCTGCTTCCTTCCCTTCTCCAGCATCTGGAGGTCACCTCATTTATTaGCTTGGGTCCCTGAACTGCATCACCTTTTCTTTCTTGTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: SASFPSPASGGHLIY*LGSLNCITFSFLCP Trigger: TGGACACAAGAAAGAAAAGGTGATGCAGTTCAGGGACCCAAGCCAATAAATGAGGTGACCTCCAGATGCTGGAGAAGGGAAGGAAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS GCA 90 bp | CCACTGCTTCTTTGCGAGCCTCAGTTTTGCAAATTCCTTCATCCATaGAACATTCCCAGGTTCTCAGGATGTCTTTGGAGGCCATTCTTC | + |
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Preference number: 5 (lower is better) Translates to: PLLLCEPQFCKFLHP*NIPRFSGCLWRPFF Trigger: GAAGAATGGCCTCCAAAGACATCCTGAGAACCTGGGAATGTTGCATGGATGAAGGAATTTGCAAAACTGAGGCTCGCAAAGAAGCAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS GCA 90 bp | CTCTTGGATGCAGTGGTTCCACTGCTTCTTTGCGAGCCTCAGTTTTaGAAATTCCTTCATCCATGCAACATTCCCAGGTTCTCAGGATGT | + |
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Preference number: 5 (lower is better) Translates to: LLDAVVPLLLCEPQF*KFLHPCNIPRFSGC Trigger: ACATCCTGAGAACCTGGGAATGTTGCATGGATGAAGGAATTTGCAAAACTGAGGCTCGCAAAGAAGCAGTGGAACCACTGCATCCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS GCA 90 bp | TCCTTCCAGCTTCATCTTCACTCCTCTTGGATGCAGTGGTTCCACTaGTTCTTTGCGAGCCTCAGTTTTGCAAATTCCTTCATCCATGCA | + |
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Preference number: 5 (lower is better) Translates to: SFQLHLHSSWMQWFH*FFASLSFANSFIHA Trigger: TGCATGGATGAAGGAATTTGCAAAACTGAGGCTCGCAAAGAAGCAGTGGAACCACTGCATCCAAGAGGAGTGAAGATGAAGCTGGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS TCA 90 bp | TCAGTCCTTCAGAGGCGGAGCACAGACTTCCCTTCAGTTGCTCATTaGAACCTGAGTTCTAGCAATGTTCTTTCTCTTCAAGCATCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SVLQRRSTDFPSVAH*NLSSSNVLSLQASP Trigger: TGGAGATGCTTGAAGAGAAAGAACATTGCTAGAACTCAGGTTTCAATGAGCAACTGAAGGGAAGTCTGTGCTCCGCCTCTGAAGGACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS CCA 90 bp | TTCCTTCCCTTCTCCAGCATCTGGAGGTCACCTCATTTATTGGCTTaGGTCCCTGAACTGCATCACCTTTTCTTTCTTGTGTCCATTGTT | + |
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Preference number: 5 (lower is better) Translates to: FLPFSSIWRSPHLLA*VPELHHLFFLVSIV Trigger: AACAATGGACACAAGAAAGAAAAGGTGATGCAGTTCAGGGACCCAAGCCAATAAATGAGGTGACCTCCAGATGCTGGAGAAGGGAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS TCA 90 bp | CTTCTCCAGCATCTGGAGGTCACCTCATTTATTGGCTTGGGTCCCTaGACTGCATCACCTTTTCTTTCTTGTGTCCATTGTTTTCTCATC | + |
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Preference number: 5 (lower is better) Translates to: LLQHLEVTSFIGLGP*TASPFLSCVHCFLI Trigger: GATGAGAAAACAATGGACACAAGAAAGAAAAGGTGATGCAGTTCAGGGACCCAAGCCAATAAATGAGGTGACCTCCAGATGCTGGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS CCA 90 bp | GTGTTAGTTTCCCATGGCAGCTTTAACAAATTACTGCAAATTTCATaGCTTAAACGAACACACATTTATGCTTACACAGTTCTGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: VLVSHGSFNKLLQIS*LKRTHIYAYTVLAA Trigger: AGCTGCCAGAACTGTGTAAGCATAAATGTGTGTTCGTTTAAGCCATGAAATTTGCAGTAATTTGTTAAAGCTGCCATGGGAAACTAACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS TCA 90 bp | AAGACACATGTGATTACATTTAGAGCTCACTGGGGTAACCCAGCATaGTCCACAAATTTCAAGCTCCTTAACTTAATCACTTTTGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: KTHVITFRAHWGNPA*STNFKLLNLITFAN Trigger: ATTTGCAAAAGTGATTAAGTTAAGGAGCTTGAAATTTGTGGATCATGCTGGGTTACCCCAGTGAGCTCTAAATGTAATCACATGTGTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS TCA 72 bp | TTCCTCTGGGGCCAGTGGAGTGAACGCTGCCATCCATaGTGCCGAGATTCATCTGTCCCAGGATCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: FLWGQWSERCHP*CRDSSVPGSSG Trigger: CCCAGATGATCCTGGGACAGATGAATCTCGGCATCATGGATGGCAGCGTTCACTCCACTGGCCCCAGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS GCA 72 bp | AGAGCCCTGCTTCTTTTGGGGGCTCTAGAGTCCATCTaGTTCCTTCCCTTCTCCAGCATCTGGAGGTCACCT | + |
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Preference number: 6 (lower is better) Translates to: RALLLLGALESI*FLPFSSIWRSP Trigger: AGGTGACCTCCAGATGCTGGAGAAGGGAAGGAAGCAGATGGACTCTAGAGCCCCCAAAAGAAGCAGGGCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS GCA 72 bp | TCTCTGTTGTCCCAGGACATCCCATTCTGCTCCAACTaGATCAGGAAACAGCCAGCAACTCCTGCAGACACT | + |
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Preference number: 6 (lower is better) Translates to: SLLSQDIPFCSN*IRKQPATPADT Trigger: AGTGTCTGCAGGAGTTGCTGGCTGTTTCCTGATGCAGTTGGAGCAGAATGGGATGTCCTGGGACAACAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000430529.1 ENST00000436808.2 |
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| CDS CAA 72 bp | GGACAAAATCAAGGTGATGGCAGAGCCCTGCTTCTTTaGGGGGCTCTAGAGTCCATCTGCTTCCTTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GQNQGDGRALLL*GALESICFLPF Trigger: GAAGGGAAGGAAGCAGATGGACTCTAGAGCCCCCAAAAGAAGCAGGGCTCTGCCATCACCTTGATTTTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS CAA 90 bp | GTTTCATTGGGACAAAATCAAGGTGATGGCAGAGCCCTGCTTCTTTaGGGGGCTCTAGAGTCCATCTGCTTCCTTCCCTTCTCCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: VSLGQNQGDGRALLL*GALESICFLPFSSI Trigger: GATGCTGGAGAAGGGAAGGAAGCAGATGGACTCTAGAGCCCCCAAAAGAAGCAGGGCTCTGCCATCACCTTGATTTTGTCCCAATGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS CCA 72 bp | CTAGAGTCCATCTGCTTCCTTCCCTTCTCCAGCATCTaGAGGTCACCTCATTTATTGGCTTGGGTCCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LESICFLPFSSI*RSPHLLAWVPE Trigger: TTCAGGGACCCAAGCCAATAAATGAGGTGACCTCCAGATGCTGGAGAAGGGAAGGAAGCAGATGGACTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS CCA 72 bp | TCCTTCCAGCTTCATCTTCACTCCTCTTGGATGCAGTaGTTCCACTGCTTCTTTGCGAGCCTCAGTTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: SFQLHLHSSWMQ*FHCFFASLSFA Trigger: TGCAAAACTGAGGCTCGCAAAGAAGCAGTGGAACCACTGCATCCAAGAGGAGTGAAGATGAAGCTGGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS CAA 90 bp | ATCTGCTTCCTTCCCTTCTCCAGCATCTGGAGGTCACCTCATTTATaGGCTTGGGTCCCTGAACTGCATCACCTTTTCTTTCTTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: ICFLPFSSIWRSPHL*AWVPELHHLFFLVS Trigger: GGACACAAGAAAGAAAAGGTGATGCAGTTCAGGGACCCAAGCCAATAAATGAGGTGACCTCCAGATGCTGGAGAAGGGAAGGAAGCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS CAA 90 bp | CCTCTTGGATGCAGTGGTTCCACTGCTTCTTTGCGAGCCTCAGTTTaGCAAATTCCTTCATCCATGCAACATTCCCAGGTTCTCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: PLGCSGSTASLRASV*QIPSSMQHSQVLRM Trigger: CATCCTGAGAACCTGGGAATGTTGCATGGATGAAGGAATTTGCAAAACTGAGGCTCGCAAAGAAGCAGTGGAACCACTGCATCCAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS GCA 72 bp | CAGACTCTCAGCTTCCGGTCCTTAGAAGCTCCCTTCTaGTTCCATATCCAGGTCATTGTCACACAGTACAAA | + |
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Preference number: 6 (lower is better) Translates to: QTLSFRSLEAPF*FHIQVIVTQYK Trigger: TTTGTACTGTGTGACAATGACCTGGATATGGAAGCAGAAGGGAGCTTCTAAGGACCGGAAGCTGAGAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS GCA 72 bp | GCAGTGGTTCCACTGCTTCTTTGCGAGCCTCAGTTTTaGAAATTCCTTCATCCATGCAACATTCCCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: AVVPLLLCEPQF*KFLHPCNIPRF Trigger: GAACCTGGGAATGTTGCATGGATGAAGGAATTTGCAAAACTGAGGCTCGCAAAGAAGCAGTGGAACCACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS CAA 72 bp | CTTCCCTTCTCCAGCATCTGGAGGTCACCTCATTTATaGGCTTGGGTCCCTGAACTGCATCACCTTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LPFSSIWRSPHL*AWVPELHHLFF Trigger: AAAGAAAAGGTGATGCAGTTCAGGGACCCAAGCCAATAAATGAGGTGACCTCCAGATGCTGGAGAAGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS GCA 72 bp | CTTTGCGAGCCTCAGTTTTGCAAATTCCTTCATCCATaGAACATTCCCAGGTTCTCAGGATGTCTTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LCEPQFCKFLHP*NIPRFSGCLWR Trigger: CCTCCAAAGACATCCTGAGAACCTGGGAATGTTGCATGGATGAAGGAATTTGCAAAACTGAGGCTCGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS GCA 72 bp | CTTCATCTTCACTCCTCTTGGATGCAGTGGTTCCACTaGTTCTTTGCGAGCCTCAGTTTTGCAAATTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LHLHSSWMQWFH*FFASLSFANSF Trigger: GAAGGAATTTGCAAAACTGAGGCTCGCAAAGAAGCAGTGGAACCACTGCATCCAAGAGGAGTGAAGATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS CAA 72 bp | TCATCCATGCAACATTCCCAGGTTCTCAGGATGTCTTaGGAGGCCATTCTTCAGATGACCACACTAGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SSMQHSQVLRMS*EAILQMTTLVK Trigger: CTTGACTAGTGTGGTCATCTGAAGAATGGCCTCCAAAGACATCCTGAGAACCTGGGAATGTTGCATGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000430529.1 ENST00000436808.2 |
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| CDS CAA 72 bp | TGCAGTGGTTCCACTGCTTCTTTGCGAGCCTCAGTTTaGCAAATTCCTTCATCCATGCAACATTCCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: CSGSTASLRASV*QIPSSMQHSQV Trigger: AACCTGGGAATGTTGCATGGATGAAGGAATTTGCAAAACTGAGGCTCGCAAAGAAGCAGTGGAACCACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS TCA 72 bp | CAGAGGCGGAGCACAGACTTCCCTTCAGTTGCTCATTaGAACCTGAGTTCTAGCAATGTTCTTTCTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: QRRSTDFPSVAH*NLSSSNVLSLQ Trigger: TTGAAGAGAAAGAACATTGCTAGAACTCAGGTTTCAATGAGCAACTGAAGGGAAGTCTGTGCTCCGCCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS GCA 72 bp | GGAGGTCACCTCATTTATTGGCTTGGGTCCCTGAACTaGATCACCTTTTCTTTCTTGTGTCCATTGTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: GGHLIYWLGSLN*ITFSFLCPLFS Trigger: AGAAAACAATGGACACAAGAAAGAAAAGGTGATGCAGTTCAGGGACCCAAGCCAATAAATGAGGTGACCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS CAA 72 bp | AATGTTCTTTCTCTTCAAGCATCTCCAGGACTAGATTaGGAAAACGCAGCCTCTCTGCTTCCTTCTTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: NVLSLQASPGLD*ENAASLLPSLR Trigger: CCTTAAAGAAGGAAGCAGAGAGGCTGCGTTTTCCAAATCTAGTCCTGGAGATGCTTGAAGAGAAAGAACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436808.2 |
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| CDS CCA 72 bp | TTTATGCTTACACAGTTCTGGCAGCTAAATGACCAATaGGTTTCATTGGGACAAAATCAAGGTGATGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: FMLTQFWQLNDQ*VSLGQNQGDGR Trigger: TCTGCCATCACCTTGATTTTGTCCCAATGAAACCCATTGGTCATTTAGCTGCCAGAACTGTGTAAGCATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS TCA 72 bp | GTGATTACATTTAGAGCTCACTGGGGTAACCCAGCATaGTCCACAAATTTCAAGCTCCTTAACTTAATCACT | + |
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Preference number: 6 (lower is better) Translates to: VITFRAHWGNPA*STNFKLLNLIT Trigger: AGTGATTAAGTTAAGGAGCTTGAAATTTGTGGATCATGCTGGGTTACCCCAGTGAGCTCTAAATGTAATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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| CDS CCA 72 bp | TCCCATGGCAGCTTTAACAAATTACTGCAAATTTCATaGCTTAAACGAACACACATTTATGCTTACACAGTT | + |
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Preference number: 6 (lower is better) Translates to: SHGSFNKLLQIS*LKRTHIYAYTV Trigger: AACTGTGTAAGCATAAATGTGTGTTCGTTTAAGCCATGAAATTTGCAGTAATTTGTTAAAGCTGCCATGGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430529.1 |
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