Pregenerated sensors for LINC01864 (Homo sapiens)
Ensembl gene IDs: ENSG00000267522Ensembl transcript IDs: ENST00000587218.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AATGAAGTCGTGGTCCTTCTGAGCAGGGCTGACACGGATTTCCTGTaGGCCAGTCGCGTCCGGCGAGGGGAAGGGGAGGCCGCTGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: NEVVVLLSRADTDFL*ASRVRRGEGEAAGC Trigger: ACACCCAGCGGCCTCCCCTTCCCCTCGCCGGACGCGACTGGCTCACAGGAAATCCGTGTCAGCCCTGCTCAGAAGGACCACGACTTCATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS TCA 90 bp | TCCACCAATGCCAGAACTGGCCTGGATGCTTCTCCACTTCAGCCCTaGGCCTGGGCTGAAGCTGCTGAGGCTCTGCATCCCGCTGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: STNARTGLDASPLQP*AWAEAAEALHPAGL Trigger: GAGGCCAGCGGGATGCAGAGCCTCAGCAGCTTCAGCCCAGGCTCAGGGCTGAAGTGGAGAAGCATCCAGGCCAGTTCTGGCATTGGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS GCA 90 bp | AAGTCCAAGATCAGGGTGCTGGCATGTCTGGTGTCTGGTGAGGGCTaGTTCCCAGCGTGCGGACGGTGGCCTTCTCCCTGTGTCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: KSKIRVLACLVSGEG*FPACGRWPSPCVLL Trigger: CAGGAGGACACAGGGAGAAGGCCACCGTCCGCACGCTGGGAAGCAGCCCTCACCAGACACCAGACATGCCAGCACCCTGATCTTGGACTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS TCA 90 bp | CCAGCGGGTCTCAGGCTGGTGCCCCGGGTAACATCCGGCTGTGTCTaGAGACTTTCTTGGTTGTCACAACTGCGGGAGGGAAGGCACCTG | + |
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Preference number: 5 (lower is better) Translates to: PAGLRLVPRVTSGCV*RLSWLSQLREGRHL Trigger: CAGGTGCCTTCCCTCCCGCAGTTGTGACAACCAAGAAAGTCTTCAGACACAGCCGGATGTTACCCGGGGCACCAGCCTGAGACCCGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS TCA 90 bp | AGGATGGAAGTCCAAGATCAGGGTGCTGGCATGTCTGGTGTCTGGTaGGGGCTGCTTCCCAGCGTGCGGACGGTGGCCTTCTCCCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: RMEVQDQGAGMSGVW*GLLPSVRTVAFSLC Trigger: ACACAGGGAGAAGGCCACCGTCCGCACGCTGGGAAGCAGCCCTCACCAGACACCAGACATGCCAGCACCCTGATCTTGGACTTCCATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS TCA 90 bp | GAGAGCCCTCTGGGAGCTGCAGATGCACTGTCATTCCTGGTGGGATaGAACACTGCCCAGACCACATCTGGTTCTGTGGCTCCATCTACC | + |
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Preference number: 5 (lower is better) Translates to: ESPLGAADALSFLVG*NTAQTTSGSVAPST Trigger: GGTAGATGGAGCCACAGAACCAGATGTGGTCTGGGCAGTGTTTCATCCCACCAGGAATGACAGTGCATCTGCAGCTCCCAGAGGGCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS GCA 90 bp | GTACTGCTCTTGAAGTCTCCAGCCAGAAGCGACACACACTTCTTCTaGTCTGGGTTCATCCCCCACAGCAAGGCACATGGCCATGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: VLLLKSPARSDTHFF*SGFIPHSKAHGHAQ Trigger: CTGGGCATGGCCATGTGCCTTGCTGTGGGGGATGAACCCAGAGCAGAAGAAGTGTGTGTCGCTTCTGGCTGGAGACTTCAAGAGCAGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS CCA 90 bp | GCTGCTTCCCAGCGTGCGGACGGTGGCCTTCTCCCTGTGTCCTCCTaGGAAGGAAAACAGGAAAATTGGGCAGAGAGAGAAGGAACATGT | + |
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Preference number: 5 (lower is better) Translates to: AASQRADGGLLPVSS*EGKQENWAEREGTC Trigger: ACATGTTCCTTCTCTCTCTGCCCAATTTTCCTGTTTTCCTTCCCAGGAGGACACAGGGAGAAGGCCACCGTCCGCACGCTGGGAAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS CCA 90 bp | TGCACTGTCATTCCTGGTGGGATGAAACACTGCCCAGACCACATCTaGTTCTGTGGCTCCATCTACCTGCCTCTCCTTAGCTGCATTCGC | + |
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Preference number: 5 (lower is better) Translates to: CTVIPGGMKHCPDHI*FCGSIYLPLLSCIR Trigger: GCGAATGCAGCTAAGGAGAGGCAGGTAGATGGAGCCACAGAACCAGATGTGGTCTGGGCAGTGTTTCATCCCACCAGGAATGACAGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS GCA 90 bp | CTTCTTCTGCTCTGGGTTCATCCCCCACAGCAAGGCACATGGCCATaGCCAGCTTTCAGGGAGCCGGAAAGTAAGTCCTATTTTGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: LLLLWVHPPQQGTWP*PAFREPESKSYFVS Trigger: AGACACAAAATAGGACTTACTTTCCGGCTCCCTGAAAGCTGGGCATGGCCATGTGCCTTGCTGTGGGGGATGAACCCAGAGCAGAAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS GCA 90 bp | GACCACATCTGGTTCTGTGGCTCCATCTACCTGCCTCTCCTTAGCTaGATTCGCCACTGTGACTGGTGCAATACAGAAATGCTCACTGCA | + |
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Preference number: 5 (lower is better) Translates to: DHIWFCGSIYLPLLS*IRHCDWCNTEMLTA Trigger: TGCAGTGAGCATTTCTGTATTGCACCAGTCACAGTGGCGAATGCAGCTAAGGAGAGGCAGGTAGATGGAGCCACAGAACCAGATGTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS CCA 90 bp | GGCTCCATCTACCTGCCTCTCCTTAGCTGCATTCGCCACTGTGACTaGTGCAATACAGAAATGCTCACTGCAACTGGGCAAGGTCAATAT | + |
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Preference number: 5 (lower is better) Translates to: GSIYLPLLSCIRHCD*CNTEMLTATGQGQY Trigger: ATATTGACCTTGCCCAGTTGCAGTGAGCATTTCTGTATTGCACCAGTCACAGTGGCGAATGCAGCTAAGGAGAGGCAGGTAGATGGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS CCA 90 bp | AGCAGCCTGAAATCATGGATTTTAGTTTCTGTCTCTAGTGATAAGTaGAAAAGAGGGATGAGGAAGGGTCTTTACTGGTCCAACCGCAAA | + |
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Preference number: 5 (lower is better) Translates to: SSLKSWILVSVSSDK*KRGMRKGLYWSNRK Trigger: TTTGCGGTTGGACCAGTAAAGACCCTTCCTCATCCCTCTTTTCCACTTATCACTAGAGACAGAAACTAAAATCCATGATTTCAGGCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS TCA 72 bp | GTGGTCCTTCTGAGCAGGGCTGACACGGATTTCCTGTaGGCCAGTCGCGTCCGGCGAGGGGAAGGGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VVLLSRADTDFL*ASRVRRGEGEA Trigger: GGCCTCCCCTTCCCCTCGCCGGACGCGACTGGCTCACAGGAAATCCGTGTCAGCCCTGCTCAGAAGGACCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS GCA 72 bp | GCATGTCTGGTGTCTGGTGAGGGCTGCTTCCCAGCGTaGGGACGGTGGCCTTCTCCCTGTGTCCTCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: ACLVSGEGCFPA*GRWPSPCVLLG Trigger: TCCCAGGAGGACACAGGGAGAAGGCCACCGTCCGCACGCTGGGAAGCAGCCCTCACCAGACACCAGACATGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS TCA 72 bp | GTCCAAGATCAGGGTGCTGGCATGTCTGGTGTCTGGTaGGGGCTGCTTCCCAGCGTGCGGACGGTGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: VQDQGAGMSGVW*GLLPSVRTVAF Trigger: GAAGGCCACCGTCCGCACGCTGGGAAGCAGCCCTCACCAGACACCAGACATGCCAGCACCCTGATCTTGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS CCA 72 bp | GTGTCTGGTGAGGGCTGCTTCCCAGCGTGCGGACGGTaGCCTTCTCCCTGTGTCCTCCTGGGAAGGAAAACA | + |
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Preference number: 6 (lower is better) Translates to: VSGEGCFPACGR*PSPCVLLGRKT Trigger: TGTTTTCCTTCCCAGGAGGACACAGGGAGAAGGCCACCGTCCGCACGCTGGGAAGCAGCCCTCACCAGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS CAA 72 bp | GCCCCGGGTAACATCCGGCTGTGTCTGAAGACTTTCTaGGTTGTCACAACTGCGGGAGGGAAGGCACCTGGC | + |
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Preference number: 6 (lower is better) Translates to: APGNIRLCLKTF*VVTTAGGKAPG Trigger: GCCAGGTGCCTTCCCTCCCGCAGTTGTGACAACCAAGAAAGTCTTCAGACACAGCCGGATGTTACCCGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS TCA 72 bp | CTCAGGCTGGTGCCCCGGGTAACATCCGGCTGTGTCTaGAGACTTTCTTGGTTGTCACAACTGCGGGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LRLVPRVTSGCV*RLSWLSQLREG Trigger: TCCCTCCCGCAGTTGTGACAACCAAGAAAGTCTTCAGACACAGCCGGATGTTACCCGGGGCACCAGCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS CCA 72 bp | GTCTCCAGCCAGAAGCGACACACACTTCTTCTGCTCTaGGTTCATCCCCCACAGCAAGGCACATGGCCATGC | + |
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Preference number: 6 (lower is better) Translates to: VSSQKRHTLLLL*VHPPQQGTWPC Trigger: GCATGGCCATGTGCCTTGCTGTGGGGGATGAACCCAGAGCAGAAGAAGTGTGTGTCGCTTCTGGCTGGAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS GCA 72 bp | CCGGCTGTGTCTGAAGACTTTCTTGGTTGTCACAACTaGGGGAGGGAAGGCACCTGGCAGGTAAAAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PAVSEDFLGCHN*GREGTWQVKAG Trigger: CCCTGCTTTTACCTGCCAGGTGCCTTCCCTCCCGCAGTTGTGACAACCAAGAAAGTCTTCAGACACAGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS GCA 72 bp | TCTTATTCCGGACCTTCCTTAGGGCCGGTAGGGAAGTaGTGGTTTCTCTCAGCTCTCTGCTGCCACCACCTG | + |
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Preference number: 6 (lower is better) Translates to: SYSGPSLGPVGK*WFLSALCCHHL Trigger: CAGGTGGTGGCAGCAGAGAGCTGAGAGAAACCAGCACTTCCCTACCGGCCCTAAGGAAGGTCCGGAATAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS GCA 72 bp | GCCCAGACCACATCTGGTTCTGTGGCTCCATCTACCTaGCTCTCCTTAGCTGCATTCGCCACTGTGACTGGT | + |
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Preference number: 6 (lower is better) Translates to: AQTTSGSVAPST*LSLAAFATVTG Trigger: ACCAGTCACAGTGGCGAATGCAGCTAAGGAGAGGCAGGTAGATGGAGCCACAGAACCAGATGTGGTCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS GCA 72 bp | TTGAAGTCTCCAGCCAGAAGCGACACACACTTCTTCTaGTCTGGGTTCATCCCCCACAGCAAGGCACATGGC | + |
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Preference number: 6 (lower is better) Translates to: LKSPARSDTHFF*SGFIPHSKAHG Trigger: GCCATGTGCCTTGCTGTGGGGGATGAACCCAGAGCAGAAGAAGTGTGTGTCGCTTCTGGCTGGAGACTTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS CCA 72 bp | TTTCTTGGTTGTCACAACTGCGGGAGGGAAGGCACCTaGCAGGTAAAAGCAGGGACGTCACTGAACACCCTA | + |
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Preference number: 6 (lower is better) Translates to: FLGCHNCGREGT*QVKAGTSLNTL Trigger: TAGGGTGTTCAGTGACGTCCCTGCTTTTACCTGCCAGGTGCCTTCCCTCCCGCAGTTGTGACAACCAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS GCA 72 bp | CTGCCTCTCCTTAGCTGCATTCGCCACTGTGACTGGTaGAATACAGAAATGCTCACTGCAACTGGGCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: LPLLSCIRHCDW*NTEMLTATGQG Trigger: ACCTTGCCCAGTTGCAGTGAGCATTTCTGTATTGCACCAGTCACAGTGGCGAATGCAGCTAAGGAGAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS TCA 72 bp | TCTATATTCTCAGTGTTCTCTGTCCTGTGGTCTCAGTaGTGGGTCCTGTTCCTTTTACCTGGGGCAACCCCC | + |
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Preference number: 6 (lower is better) Translates to: SIFSVFSVLWSQ*WVLFLLPGATP Trigger: GGGGGTTGCCCCAGGTAAAAGGAACAGGACCCATCACTGAGACCACAGGACAGAGAACACTGAGAATATAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS GCA 72 bp | TGGTTCTGTGGCTCCATCTACCTGCCTCTCCTTAGCTaGATTCGCCACTGTGACTGGTGCAATACAGAAATG | + |
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Preference number: 6 (lower is better) Translates to: WFCGSIYLPLLS*IRHCDWCNTEM Trigger: CATTTCTGTATTGCACCAGTCACAGTGGCGAATGCAGCTAAGGAGAGGCAGGTAGATGGAGCCACAGAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS CCA 72 bp | TACCTGCCTCTCCTTAGCTGCATTCGCCACTGTGACTaGTGCAATACAGAAATGCTCACTGCAACTGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: YLPLLSCIRHCD*CNTEMLTATGQ Trigger: TTGCCCAGTTGCAGTGAGCATTTCTGTATTGCACCAGTCACAGTGGCGAATGCAGCTAAGGAGAGGCAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS CAA 90 bp | CATGGCCATGCCCAGCTTTCAGGGAGCCGGAAAGTAAGTCCTATTTaGTGTCTGAGTCTATATTCTCAGTGTTCTCTGTCCTGTGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: HGHAQLSGSRKVSPI*CLSLYSQCSLSCGL Trigger: GAGACCACAGGACAGAGAACACTGAGAATATAGACTCAGACACAAAATAGGACTTACTTTCCGGCTCCCTGAAAGCTGGGCATGGCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS CCA 72 bp | AAACAACAGACACTAATTTCTCACAGTTCTGGAGGATaGAAGTCCAAGATCAGGGTGCTGGCATGTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: KQQTLISHSSGG*KSKIRVLACLV Trigger: CACCAGACATGCCAGCACCCTGATCTTGGACTTCCATCCTCCAGAACTGTGAGAAATTAGTGTCTGTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS CAA 72 bp | GCCCAGCTTTCAGGGAGCCGGAAAGTAAGTCCTATTTaGTGTCTGAGTCTATATTCTCAGTGTTCTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: AQLSGSRKVSPI*CLSLYSQCSLS Trigger: GGACAGAGAACACTGAGAATATAGACTCAGACACAAAATAGGACTTACTTTCCGGCTCCCTGAAAGCTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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| CDS CCA 72 bp | GATAAGTGGAAAAGAGGGATGAGGAAGGGTCTTTACTaGTCCAACCGCAAACAGAAACTGAGAACCTATGAC | + |
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Preference number: 6 (lower is better) Translates to: DKWKRGMRKGLY*SNRKQKLRTYD Trigger: GTCATAGGTTCTCAGTTTCTGTTTGCGGTTGGACCAGTAAAGACCCTTCCTCATCCCTCTTTTCCACTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587218.1 |
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