Pregenerated sensors for LINC01863 (Homo sapiens)
Ensembl gene IDs: ENSG00000253959Ensembl transcript IDs: ENST00000523242.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATCAAGGCCTACACAGTGCCTTCAGGCTCGCTCCTGGCCCCGAGATaGTTTGCCCACGGATTCTGTAACTGTACGTTCCTCTTGCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: IKAYTVPSGSLLAPR*FAHGFCNCTFLLPH Trigger: GTGAGGCAAGAGGAACGTACAGTTACAGAATCCGTGGGCAAAGCATCTCGGGGCCAGGAGCGAGCCTGAAGGCACTGTGTAGGCCTTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS TCA 90 bp | TCATTAGTCTCAGCTCATGAAACAAGCTGGACCCAGGAGCTCAGGTaGCATCGTGACATCATGAGGAGGCTCTGTCTCCCCGACTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: SLVSAHETSWTQELR*HRDIMRRLCLPDSH Trigger: ATGGGAGTCGGGGAGACAGAGCCTCCTCATGATGTCACGATGTCACCTGAGCTCCTGGGTCCAGCTTGTTTCATGAGCTGAGACTAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS TCA 90 bp | GATGGCCCCTTTGGGGTGCTGTCTTCGCACAGAGCCATAATGAGGTaGCCTTGGATGCCTGAGTCCGGAAAGAACAGAAAGAGGATGTCA | + |
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Preference number: 5 (lower is better) Translates to: DGPFGVLSSHRAIMR*PWMPESGKNRKRMS Trigger: TGACATCCTCTTTCTGTTCTTTCCGGACTCAGGCATCCAAGGTCACCTCATTATGGCTCTGTGCGAAGACAGCACCCCAAAGGGGCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS CCA 90 bp | GCTAGTGGATCTGACTCAGAAAGCCGATCAGATGTTCCAAATCGATaGCCCCTTTGGGGTGCTGTCTTCGCACAGAGCCATAATGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: ASGSDSESRSDVPNR*PLWGAVFAQSHNEV Trigger: CACCTCATTATGGCTCTGTGCGAAGACAGCACCCCAAAGGGGCCATCGATTTGGAACATCTGATCGGCTTTCTGAGTCAGATCCACTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS GCA 90 bp | CCCCGAGATGCTTTGCCCACGGATTCTGTAACTGTACGTTCCTCTTaGCTCACCGTGCCCGAACAGTTACAATCATTAGTCTCAGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: PRDALPTDSVTVRSS*LTVPEQLQSLVSAH Trigger: ATGAGCTGAGACTAATGATTGTAACTGTTCGGGCACGGTGAGGCAAGAGGAACGTACAGTTACAGAATCCGTGGGCAAAGCATCTCGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS CCA 90 bp | TCTGACTCAGAAAGCCGATCAGATGTTCCAAATCGATGGCCCCTTTaGGGTGCTGTCTTCGCACAGAGCCATAATGAGGTGACCTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: SDSESRSDVPNRWPL*GAVFAQSHNEVTLD Trigger: ATCCAAGGTCACCTCATTATGGCTCTGTGCGAAGACAGCACCCCAAAGGGGCCATCGATTTGGAACATCTGATCGGCTTTCTGAGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS TCA 72 bp | GCTGGACCCAGGAGCTCAGGTGACATCGTGACATCATaGGGAGGCTCTGTCTCCCCGACTCCCATCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: AGPRSSGDIVTS*GGSVSPTPISG Trigger: CCCAGAGATGGGAGTCGGGGAGACAGAGCCTCCTCATGATGTCACGATGTCACCTGAGCTCCTGGGTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS CAA 90 bp | AGGCCTACACAGTGCCTTCAGGCTCGCTCCTGGCCCCGAGATGCTTaGCCCACGGATTCTGTAACTGTACGTTCCTCTTGCCTCACCGTG | + |
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Preference number: 6 (lower is better) Translates to: RPTQCLQARSWPRDA*PTDSVTVRSSCLTV Trigger: CACGGTGAGGCAAGAGGAACGTACAGTTACAGAATCCGTGGGCAAAGCATCTCGGGGCCAGGAGCGAGCCTGAAGGCACTGTGTAGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS CAA 72 bp | CAGTGCCTTCAGGCTCGCTCCTGGCCCCGAGATGCTTaGCCCACGGATTCTGTAACTGTACGTTCCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: QCLQARSWPRDA*PTDSVTVRSSC Trigger: GCAAGAGGAACGTACAGTTACAGAATCCGTGGGCAAAGCATCTCGGGGCCAGGAGCGAGCCTGAAGGCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS TCA 72 bp | TCAGCTCATGAAACAAGCTGGACCCAGGAGCTCAGGTaGCATCGTGACATCATGAGGAGGCTCTGTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SAHETSWTQELR*HRDIMRRLCLP Trigger: GGGGAGACAGAGCCTCCTCATGATGTCACGATGTCACCTGAGCTCCTGGGTCCAGCTTGTTTCATGAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS CCA 72 bp | GAAAGCCGATCAGATGTTCCAAATCGATGGCCCCTTTaGGGTGCTGTCTTCGCACAGAGCCATAATGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: ESRSDVPNRWPL*GAVFAQSHNEV Trigger: CACCTCATTATGGCTCTGTGCGAAGACAGCACCCCAAAGGGGCCATCGATTTGGAACATCTGATCGGCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS CCA 72 bp | TCTGACTCAGAAAGCCGATCAGATGTTCCAAATCGATaGCCCCTTTGGGGTGCTGTCTTCGCACAGAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SDSESRSDVPNR*PLWGAVFAQSH Trigger: ATGGCTCTGTGCGAAGACAGCACCCCAAAGGGGCCATCGATTTGGAACATCTGATCGGCTTTCTGAGTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS CAA 90 bp | GCCCCGAGATGCTTTGCCCACGGATTCTGTAACTGTACGTTCCTCTaGCCTCACCGTGCCCGAACAGTTACAATCATTAGTCTCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: APRCFAHGFCNCTFL*PHRARTVTIISLSS Trigger: TGAGCTGAGACTAATGATTGTAACTGTTCGGGCACGGTGAGGCAAGAGGAACGTACAGTTACAGAATCCGTGGGCAAAGCATCTCGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS TCA 72 bp | TTTGGGGTGCTGTCTTCGCACAGAGCCATAATGAGGTaGCCTTGGATGCCTGAGTCCGGAAAGAACAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: FGVLSSHRAIMR*PWMPESGKNRK Trigger: CTTTCTGTTCTTTCCGGACTCAGGCATCCAAGGTCACCTCATTATGGCTCTGTGCGAAGACAGCACCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS GCA 72 bp | GCTTTGCCCACGGATTCTGTAACTGTACGTTCCTCTTaGCTCACCGTGCCCGAACAGTTACAATCATTAGTC | + |
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Preference number: 6 (lower is better) Translates to: ALPTDSVTVRSS*LTVPEQLQSLV Trigger: GACTAATGATTGTAACTGTTCGGGCACGGTGAGGCAAGAGGAACGTACAGTTACAGAATCCGTGGGCAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS CAA 72 bp | TGCTTTGCCCACGGATTCTGTAACTGTACGTTCCTCTaGCCTCACCGTGCCCGAACAGTTACAATCATTAGT | + |
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Preference number: 6 (lower is better) Translates to: CFAHGFCNCTFL*PHRARTVTIIS Trigger: ACTAATGATTGTAACTGTTCGGGCACGGTGAGGCAAGAGGAACGTACAGTTACAGAATCCGTGGGCAAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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| CDS CAA 90 bp | GAGTCTTTTAATAGACCTCCAGAGGTTAATGGGCCTGACATATCTTaGACATTTATTGGATTTTACGAGCTAGTGGATCTGACTCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: ESFNRPPEVNGPDIS*TFIGFYELVDLTQK Trigger: TTTCTGAGTCAGATCCACTAGCTCGTAAAATCCAATAAATGTCAAAGATATGTCAGGCCCATTAACCTCTGGAGGTCTATTAAAAGACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523242.1 |
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