Pregenerated sensors for LINC01861 (Homo sapiens)

Ensembl gene IDs: ENSG00000251183

Ensembl transcript IDs: ENST00000509568.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AGGATTCCCGTTAGGTGTTCAGATCACTGCTTTCCTTCTGCCGGCTaGTGTCTCTTATCATCCACCTTCCAGAACATTGCCATGGAATGG	+
Preference number: 5 (lower is better) Translates to: RIPVRCSDHCFPSAG*CLLSSTFQNIAMEW Trigger: CCATTCCATGGCAATGTTCTGGAAGGTGGATGATAAGAGACAGCAGCCGGCAGAAGGAAAGCAGTGATCTGAACACCTAACGGGAATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509568.1
CDS CCA 90 bp	TCAGAGTCTTTCCACTCCAAGTTTCCAATTCCCAGTGTCTTACCCTaGGTTAATCAGCTATGGCAAGGGAAGCAGGATCCGACAGTATGG	+
Preference number: 5 (lower is better) Translates to: SESFHSKFPIPSVLP*VNQLWQGKQDPTVW Trigger: CCATACTGTCGGATCCTGCTTCCCTTGCCATAGCTGATTAACCCAGGGTAAGACACTGGGAATTGGAAACTTGGAGTGGAAAGACTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509568.1
CDS TCA 90 bp	TCCAGAACATTGCCATGGAATGGGATTTGGCTCCAGAGACCACTATaGTCAGAGTCTTTCCACTCCAAGTTTCCAATTCCCAGTGTCTTA	+
Preference number: 5 (lower is better) Translates to: SRTLPWNGIWLQRPL*SESFHSKFPIPSVL Trigger: TAAGACACTGGGAATTGGAAACTTGGAGTGGAAAGACTCTGATCATAGTGGTCTCTGGAGCCAAATCCCATTCCATGGCAATGTTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509568.1
CDS GCA 72 bp	GTTAGGTGTTCAGATCACTGCTTTCCTTCTGCCGGCTaGTGTCTCTTATCATCCACCTTCCAGAACATTGCC	+
Preference number: 6 (lower is better) Translates to: VRCSDHCFPSAG*CLLSSTFQNIA Trigger: GGCAATGTTCTGGAAGGTGGATGATAAGAGACAGCAGCCGGCAGAAGGAAAGCAGTGATCTGAACACCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509568.1
CDS TCA 72 bp	TTGCCATGGAATGGGATTTGGCTCCAGAGACCACTATaGTCAGAGTCTTTCCACTCCAAGTTTCCAATTCCC	+
Preference number: 6 (lower is better) Translates to: LPWNGIWLQRPL*SESFHSKFPIP Trigger: GGGAATTGGAAACTTGGAGTGGAAAGACTCTGATCATAGTGGTCTCTGGAGCCAAATCCCATTCCATGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509568.1
CDS CAA 72 bp	TCATCCACCTTCCAGAACATTGCCATGGAATGGGATTaGGCTCCAGAGACCACTATGATCAGAGTCTTTCCA	+
Preference number: 6 (lower is better) Translates to: SSTFQNIAMEWD*APETTMIRVFP Trigger: TGGAAAGACTCTGATCATAGTGGTCTCTGGAGCCAAATCCCATTCCATGGCAATGTTCTGGAAGGTGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509568.1

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