Pregenerated sensors for LINC01859 (Homo sapiens)
Ensembl gene IDs: ENSG00000261558Ensembl transcript IDs: ENST00000565584.1, ENST00000653078.1, ENST00000654102.1, ENST00000655262.1, ENST00000657971.1, ENST00000658384.1, ENST00000658707.1, ENST00000658973.1, ENST00000658995.1, ENST00000663736.1, ENST00000664080.1, ENST00000664557.1, ENST00000666832.1, ENST00000671247.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAAGAGTCACATAACCTGGTGGCTGAGCCCAGTGATGTTTCACAATaGTCCCTGTGGGAAAAGACCTGTGTGCTGGGCCCAGTGATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: EESHNLVAEPSDVSQ*SLWEKTCVLGPVIS Trigger: ACTTATCACTGGGCCCAGCACACAGGTCTTTTCCCACAGGGAGCATTGTGAAACATCACTGGGCTCAGCCACCAGGTTATGTGACTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658973.1 ENST00000664080.1 ENST00000671247.1 |
||
| CDS CCA 90 bp | CATAACCTGGTGGCTGAGCCCAGTGATGTTTCACAATGCTCCCTGTaGGAAAAGACCTGCCAGAAAAGACACATCACCTGGTTACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HNLVAEPSDVSQCSL*EKTCQKRHITWLLG Trigger: GCCCAGTAACCAGGTGATGTGTCTTTTCTGGCAGGTCTTTTCCCACAGGGAGCATTGTGAAACATCACTGGGCTCAGCCACCAGGTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000565584.1 ENST00000654102.1 ENST00000658707.1 ENST00000663736.1 ENST00000664557.1 |
||
| CDS TCA 90 bp | CCCAGTCAGAAGAGGCAAATCAAACCACCTGGGTTCTGGGCCCAGTaGTATGTCACAATGTCTTCCATAGGCAAAGCCCAGGTAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSQKRQIKPPGFWAQ*YVTMSSIGKAQVTE Trigger: CTCTGTTACCTGGGCTTTGCCTATGGAAGACATTGTGACATATCACTGGGCCCAGAACCCAGGTGGTTTGATTTGCCTCTTCTGACTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666832.1 |
||
| CDS GCA 90 bp | TGCAGGCTGCAGGCAGAAAAAGAGTCACATCACTTAGGCGATAGATaGAGACATATGTCACAAGGCCGCCTATGGGCAGGGCTTATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CRLQAEKESHHLGDR*RHMSQGRLWAGLIQ Trigger: CTGAATAAGCCCTGCCCATAGGCGGCCTTGTGACATATGTCTGCATCTATCGCCTAAGTGATGTGACTCTTTTTCTGCCTGCAGCCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000565584.1 ENST00000654102.1 ENST00000658707.1 ENST00000658995.1 ENST00000663736.1 ENST00000664557.1 |
||
| CDS GCA 90 bp | GAAGAGTCACATAACCTGGTGGCTGAGCCCAGTGATGTTTCACAATaGTCCCTGTGGGAAAAGACCTGCCAGAAAAGACACATCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EESHNLVAEPSDVSQ*SLWEKTCQKRHITW Trigger: CCAGGTGATGTGTCTTTTCTGGCAGGTCTTTTCCCACAGGGAGCATTGTGAAACATCACTGGGCTCAGCCACCAGGTTATGTGACTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000565584.1 ENST00000654102.1 ENST00000658707.1 ENST00000663736.1 ENST00000664557.1 |
||
| CDS CCA 90 bp | TCCGCCTCCATTTGCATGACCTGGAATATGTCTCAATCTCCTCTATaGGCAAGGCCCAGACTGGAGAATTGGATCACTTGCATGCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SASICMTWNMSQSPL*ARPRLENWITCMQG Trigger: ACCCTGCATGCAAGTGATCCAATTCTCCAGTCTGGGCCTTGCCCATAGAGGAGATTGAGACATATTCCAGGTCATGCAAATGGAGGCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664557.1 ENST00000671247.1 |
||
| CDS TCA 90 bp | TGGGTGCAGTTATATGTCAAAATCCCACCTGAGTGCTGTGACGGGTaGTATGTCACAATGCCTTCTATGGGCATGGCTCAGGCAGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: WVQLYVKIPPECCDG*YVTMPSMGMAQAGV Trigger: AACTCCTGCCTGAGCCATGCCCATAGAAGGCATTGTGACATATCACCCGTCACAGCACTCAGGTGGGATTTTGACATATAACTGCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000664080.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS GCA 90 bp | AGCCAAAAGACTCCTTGTGGCCAGGACCCAGGCGGGAGGTTCTCATaGCCTAGGTGTTTGTCTCAGCCATACGTCATATTACCAAATATA | + |
|
Preference number: 5 (lower is better) Translates to: SQKTPCGQDPGGRFS*PRCLSQPYVILPNI Trigger: TATATTTGGTAATATGACGTATGGCTGAGACAAACACCTAGGGCATGAGAACCTCCCGCCTGGGTCCTGGCCACAAGGAGTCTTTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658973.1 ENST00000664557.1 |
||
| CDS CCA 90 bp | TATTTTCTGGAAGCAGGGCACAGGCAGAAGAGTCACATAACCTGGTaGCTGAGCCCAGTGATGTTTCACAATGCTCCCTGTGGGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: YFLEAGHRQKSHITW*LSPVMFHNAPCGKR Trigger: TCTTTTCCCACAGGGAGCATTGTGAAACATCACTGGGCTCAGCCACCAGGTTATGTGACTCTTCTGCCTGTGCCCTGCTTCCAGAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000565584.1 ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000663736.1 ENST00000664080.1 ENST00000664557.1 ENST00000671247.1 |
||
| CDS CCA 90 bp | CAATATTTTCTGGAAGCAGGGCACAGGCAGAAGAGTCACATAACCTaGTGGCTGAGCCCAGTGATGTTTCACAATGCTCCCTGTGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QYFLEAGHRQKSHIT*WLSPVMFHNAPCGK Trigger: TTTCCCACAGGGAGCATTGTGAAACATCACTGGGCTCAGCCACCAGGTTATGTGACTCTTCTGCCTGTGCCCTGCTTCCAGAAAATATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000565584.1 ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000663736.1 ENST00000664080.1 ENST00000664557.1 ENST00000671247.1 |
||
| CDS CCA 90 bp | TCCCACCTGAGTGCTGTGACGGGTGATATGTCACAATGCCTTCTATaGGCATGGCTCAGGCAGGAGTTTTACATTATTTTTGTGTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHLSAVTGDMSQCLL*AWLRQEFYIIFVLA Trigger: GGCCAACACAAAAATAATGTAAAACTCCTGCCTGAGCCATGCCCATAGAAGGCATTGTGACATATCACCCGTCACAGCACTCAGGTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000664080.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS TCA 90 bp | CATCAAATAATTGATGGACCCAGAGATATTTCACAATGCCCGCTGTaGGCAAGAGCCAGGCAAGAGACTCACATCACTTTTGTGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HQIIDGPRDISQCPL*ARARQETHITFVLG Trigger: GCCCAGCACAAAAGTGATGTGAGTCTCTTGCCTGGCTCTTGCTCACAGCGGGCATTGTGAAATATCTCTGGGTCCATCAATTATTTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666832.1 |
||
| CDS CCA 90 bp | CAATGCTCCCTGTGGGAAAAGACCTGCCAGAAAAGACACATCACCTaGTTACTGGGCAGAGCTATATGTCACAATCTTCTCTATGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QCSLWEKTCQKRHIT*LLGRAICHNLLYVQ Trigger: CTGCACATAGAGAAGATTGTGACATATAGCTCTGCCCAGTAACCAGGTGATGTGTCTTTTCTGGCAGGTCTTTTCCCACAGGGAGCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000565584.1 ENST00000654102.1 ENST00000658707.1 ENST00000663736.1 ENST00000664557.1 |
||
| CDS CCA 90 bp | ATAACTTTTGGCAGGATGAGCATACGAGATACTTCACCTGTGTGCTaGGTGCAGTTATATGTCAAAATCCCACCTGAGTGCTGTGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: ITFGRMSIRDTSPVC*VQLYVKIPPECCDG Trigger: CCCGTCACAGCACTCAGGTGGGATTTTGACATATAACTGCACCCAGCACACAGGTGAAGTATCTCGTATGCTCATCCTGCCAAAAGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000664080.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS GCA 90 bp | TGCCCTAGGTGTTTGTCTCAGCCATACGTCATATTACCAAATATATaGAGGGCCCAGGCAAACAAGGAGAGTCATAACACCTTGGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CPRCLSQPYVILPNI*RAQANKESHNTLVL Trigger: TAGCACCAAGGTGTTATGACTCTCCTTGTTTGCCTGGGCCCTGCATATATTTGGTAATATGACGTATGGCTGAGACAAACACCTAGGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658973.1 ENST00000664557.1 |
||
| CDS CCA 90 bp | ATAACTTTTGGCAGGATGAGCATACGAGATACTTCACCTGTGTGCTaGGTGCAGTTATATGTCAAAATCCCACCTGTGGGAAGATCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ITFGRMSIRDTSPVC*VQLYVKIPPVGRSR Trigger: CCTAGATCTTCCCACAGGTGGGATTTTGACATATAACTGCACCCAGCACACAGGTGAAGTATCTCGTATGCTCATCCTGCCAAAAGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565584.1 |
||
| CDS TCA 90 bp | TTTTGTGTTGGCCCTATGATATGTAACAATCCCCCTCCATTTGCATaGCCTGTGGGAAGATCTAGGGCTAGGATTCACAATTCCACACAT | + |
|
Preference number: 5 (lower is better) Translates to: FCVGPMICNNPPPFA*PVGRSRARIHNSTH Trigger: ATGTGTGGAATTGTGAATCCTAGCCCTAGATCTTCCCACAGGTCATGCAAATGGAGGGGGATTGTTACATATCATAGGGCCAACACAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000664080.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS GCA 90 bp | ATGTCAAAATCCCACCTGAGTGCTGTGACGGGTGATATGTCACAATaGCTTCTATGGGCATGGCTCAGGCAGGAGTTTTACATTATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: MSKSHLSAVTGDMSQ*LLWAWLRQEFYIIF Trigger: AAAAATAATGTAAAACTCCTGCCTGAGCCATGCCCATAGAAGGCATTGTGACATATCACCCGTCACAGCACTCAGGTGGGATTTTGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000664080.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS TCA 90 bp | GAGAGTCCCAATTCCACCTGCAGACTGTGTATTATGTTGGCTTTATaGTATGTCAAAATCCGCCTCCATTTGCATGACCTGGAATATGTC | + |
|
Preference number: 5 (lower is better) Translates to: ESPNSTCRLCIMLAL*YVKIRLHLHDLEYV Trigger: GACATATTCCAGGTCATGCAAATGGAGGCGGATTTTGACATATCATAAAGCCAACATAATACACAGTCTGCAGGTGGAATTGGGACTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664557.1 ENST00000671247.1 |
||
| CDS TCA 90 bp | TGTTGGCTTTATGATATGTCAAAATCCGCCTCCATTTGCATGACCTaGATTCTTCACCTGGAATATGTCTCAATCTCCTCTATGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CWLYDMSKSASICMT*ILHLEYVSISSMGK Trigger: CTTGCCCATAGAGGAGATTGAGACATATTCCAGGTGAAGAATTCAGGTCATGCAAATGGAGGCGGATTTTGACATATCATAAAGCCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000565584.1 ENST00000657971.1 ENST00000658707.1 ENST00000664080.1 |
||
| CDS TCA 90 bp | GAGAGTCCCAATTCCACCTGCAGACTGTGTATTATGTTGGCTTTATaGTATGTCAAAATCCGCCTCCATTTGCATGACCTGAATTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ESPNSTCRLCIMLAL*YVKIRLHLHDLNSS Trigger: TGAAGAATTCAGGTCATGCAAATGGAGGCGGATTTTGACATATCATAAAGCCAACATAATACACAGTCTGCAGGTGGAATTGGGACTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000565584.1 ENST00000657971.1 ENST00000658707.1 ENST00000664080.1 |
||
| CDS TCA 90 bp | ATCACTAAGGTTCTGGTTCCAGAGATATGTCACAATCTCTCCTATTaGCAAAGCATGGGTAGGAGAGGAGAGTCAAATGAAGCAGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ITKVLVPEICHNLSY*QSMGRRGESNEAVD Trigger: ATCAACTGCTTCATTTGACTCTCCTCTCCTACCCATGCTTTGTCAATAGGAGAGATTGTGACATATCTCTGGAACCAGAACCTTAGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654102.1 ENST00000658384.1 |
||
| CDS TCA 90 bp | GAGAGTCCCAATTCCACCTGCAGACTGTGTATTATGTTGGCTTTATaGTATGTCAAAATCCGCCTCCATTTGCATGACCTAGAGAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: ESPNSTCRLCIMLAL*YVKIRLHLHDLEKI Trigger: TATTTTCTCTAGGTCATGCAAATGGAGGCGGATTTTGACATATCATAAAGCCAACATAATACACAGTCTGCAGGTGGAATTGGGACTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000658384.1 ENST00000658973.1 ENST00000658995.1 ENST00000663736.1 ENST00000666832.1 |
||
| CDS TCA 90 bp | TATTATGTTGGCTTTATGATATGTCAAAATCCGCCTCCATTTGCATaGCCTGAATTCTTCACCTGGAATATGTCTCAATCTCCTCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: YYVGFMICQNPPPFA*PEFFTWNMSQSPLW Trigger: CCATAGAGGAGATTGAGACATATTCCAGGTGAAGAATTCAGGTCATGCAAATGGAGGCGGATTTTGACATATCATAAAGCCAACATAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000565584.1 ENST00000657971.1 ENST00000658707.1 ENST00000664080.1 |
||
| CDS CCA 72 bp | GGTCTGAGGACCCGAGGTTGTAGGTGGATCTCCTTATaGAGTGAGGGCGAGGACAGGGGACCGGTCTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GLRTRGCRWISL*SEGEDRGPVSQ Trigger: TTGGGAGACCGGTCCCCTGTCCTCGCCCTCACTCCATAAGGAGATCCACCTACAACCTCGGGTCCTCAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664557.1 |
||
| CDS CAA 72 bp | CTGGTTGATGGATGCAGAGATAAGCCAAAAGACTCCTaGTGGCCAGGACCCAGGCGGGAGGTTCTCATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LVDGCRDKPKDS*WPGPRREVLMP Trigger: GGGCATGAGAACCTCCCGCCTGGGTCCTGGCCACAAGGAGTCTTTTGGCTTATCTCTGCATCCATCAACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658973.1 ENST00000664557.1 |
||
| CDS TCA 72 bp | AAGGCCGCCTATGGGCAGGGCTTATTCAGTAGCCTCTaGTCCAATCCTGTAGGTGTTGGGTCCAGCGACATG | + |
|
Preference number: 6 (lower is better) Translates to: KAAYGQGLFSSL*SNPVGVGSSDM Trigger: CATGTCGCTGGACCCAACACCTACAGGATTGGATCAGAGGCTACTGAATAAGCCCTGCCCATAGGCGGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000565584.1 ENST00000654102.1 ENST00000658707.1 ENST00000663736.1 ENST00000664557.1 |
||
| CDS GCA 72 bp | CATAACCTGGTGGCTGAGCCCAGTGATGTTTCACAATaGTCCCTGTGGGAAAAGACCTGTGTGCTGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HNLVAEPSDVSQ*SLWEKTCVLGP Trigger: TGGGCCCAGCACACAGGTCTTTTCCCACAGGGAGCATTGTGAAACATCACTGGGCTCAGCCACCAGGTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658973.1 ENST00000664080.1 ENST00000671247.1 |
||
| CDS CCA 72 bp | CTGGAAGCAGGGCACAGGCAGAAGAGTCACATAACCTaGTGGCTGAGCCCAGTGATGTTTCACAATGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LEAGHRQKSHIT*WLSPVMFHNAP Trigger: GGGAGCATTGTGAAACATCACTGGGCTCAGCCACCAGGTTATGTGACTCTTCTGCCTGTGCCCTGCTTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000565584.1 ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000663736.1 ENST00000664080.1 ENST00000664557.1 ENST00000671247.1 |
||
| CDS CAA 72 bp | ACCTGTGTGCTGGGCCCAGTGATAAGTCACTTTCCCTaGTGTGGGCATGGCTTCAGCAGGAGAGAAGCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TCVLGPVISHFP*CGHGFSRREAS Trigger: TGACGCTTCTCTCCTGCTGAAGCCATGCCCACACAAGGGAAAGTGACTTATCACTGGGCCCAGCACACAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658973.1 ENST00000664080.1 ENST00000664557.1 ENST00000671247.1 |
||
| CDS TCA 72 bp | TGTCACAATGTCCCCTTTTGGTGGTGCACAGGCAGGTaGGGAGAGTCACATCACCCAGATAATGGGCCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: CHNVPFWWCTGR*GESHHPDNGPS Trigger: GCTAGGCCCATTATCTGGGTGATGTGACTCTCCTCACCTGCCTGTGCACCACCAAAAGGGGACATTGTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666832.1 |
||
| CDS CCA 72 bp | GGGCCCAGTGATAAGTCACTTTCCCTTGTGTGGGCATaGCTTCAGCAGGAGAGAAGCGTCACATCACTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GPSDKSLSLVWA*LQQERSVTSLR Trigger: CCTTAGTGATGTGACGCTTCTCTCCTGCTGAAGCCATGCCCACACAAGGGAAAGTGACTTATCACTGGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658973.1 ENST00000664080.1 ENST00000664557.1 ENST00000671247.1 |
||
| CDS CCA 72 bp | TGTGCTGGGCCCAGTGATAAGTCACTTTCCCTTGTGTaGGCATGGCTTCAGCAGGAGAGAAGCGTCACATCA | + |
|
Preference number: 6 (lower is better) Translates to: CAGPSDKSLSLV*AWLQQERSVTS Trigger: TGATGTGACGCTTCTCTCCTGCTGAAGCCATGCCCACACAAGGGAAAGTGACTTATCACTGGGCCCAGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658973.1 ENST00000664080.1 ENST00000664557.1 ENST00000671247.1 |
||
| CDS TCA 72 bp | GCTGGCCCAGTAATATGTCACAATTCCCTTGAGAGGTaGGCCCAGGCAGGAGAGTCACATCATTTCGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGPVICHNSLER*AQAGESHHFGE Trigger: CTCACCGAAATGATGTGACTCTCCTGCCTGGGCTCACCTCTCAAGGGAATTGTGACATATTACTGGGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654102.1 ENST00000663736.1 ENST00000664557.1 |
||
| CDS CCA 72 bp | GTGGCTGAGCCCAGTGATGTTTCACAATGCTCCCTGTaGGAAAAGACCTGCCAGAAAAGACACATCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VAEPSDVSQCSL*EKTCQKRHITW Trigger: CCAGGTGATGTGTCTTTTCTGGCAGGTCTTTTCCCACAGGGAGCATTGTGAAACATCACTGGGCTCAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000565584.1 ENST00000654102.1 ENST00000658707.1 ENST00000663736.1 ENST00000664557.1 |
||
| CDS CAA 72 bp | TCTCTAGGCACAGCTCAGGCAGGAGAGTCACAACATTaGGGTGCTGGGCTCAGAGATATGCCACAATCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLGTAQAGESQH*GAGLRDMPQSL Trigger: AAGGGATTGTGGCATATCTCTGAGCCCAGCACCCAAATGTTGTGACTCTCCTGCCTGAGCTGTGCCTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000565584.1 ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000663736.1 ENST00000664080.1 ENST00000664557.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS TCA 72 bp | CTAGGTGGCTGGCCCAGTAATATGTCACAATTCCCTTaGGAGGTGAGCCCAGGCAGGAGAGTCACATCATTT | + |
|
Preference number: 6 (lower is better) Translates to: LGGWPSNMSQFP*EVSPGRRVTSF Trigger: AAATGATGTGACTCTCCTGCCTGGGCTCACCTCTCAAGGGAATTGTGACATATTACTGGGCCAGCCACCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654102.1 ENST00000663736.1 ENST00000664557.1 |
||
| CDS GCA 72 bp | CATAACCTGGTGGCTGAGCCCAGTGATGTTTCACAATaGTCCCTGTGGGAAAAGACCTGCCAGAAAAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: HNLVAEPSDVSQ*SLWEKTCQKRH Trigger: GTGTCTTTTCTGGCAGGTCTTTTCCCACAGGGAGCATTGTGAAACATCACTGGGCTCAGCCACCAGGTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000565584.1 ENST00000654102.1 ENST00000658707.1 ENST00000663736.1 ENST00000664557.1 |
||
| CDS CAA 72 bp | GGGTGCTGGGCTCAGAGATATGCCACAATCCCTTTTTaGGGCATGTCTCCTGGTTACTGGGCAGAGCTATAT | + |
|
Preference number: 6 (lower is better) Translates to: GCWAQRYATIPF*GMSPGYWAELY Trigger: ATATAGCTCTGCCCAGTAACCAGGAGACATGCCCAAAAAAGGGATTGTGGCATATCTCTGAGCCCAGCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658995.1 |
||
| CDS CAA 72 bp | GGGTGCTGGGCTCAGAGATATGCCACAATCCCTTTTTaGGGCATGTCTCCTGCAACAGAGAAGAGGCACATT | + |
|
Preference number: 6 (lower is better) Translates to: GCWAQRYATIPF*GMSPATEKRHI Trigger: AATGTGCCTCTTCTCTGTTGCAGGAGACATGCCCAAAAAAGGGATTGTGGCATATCTCTGAGCCCAGCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666832.1 |
||
| CDS TCA 72 bp | AAGAGGCAAATCAAACCACCTGGGTTCTGGGCCCAGTaGTATGTCACAATGTCTTCCATAGGCAAAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KRQIKPPGFWAQ*YVTMSSIGKAQ Trigger: CTGGGCTTTGCCTATGGAAGACATTGTGACATATCACTGGGCCCAGAACCCAGGTGGTTTGATTTGCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666832.1 |
||
| CDS CCA 72 bp | CAATCTCCTCTATGGGCAAGGCCCAGACTGGAGAATTaGATCACTTGCATGCAGGGTCCGGTGACATATTAT | + |
|
Preference number: 6 (lower is better) Translates to: QSPLWARPRLEN*ITCMQGPVTYY Trigger: ATAATATGTCACCGGACCCTGCATGCAAGTGATCCAATTCTCCAGTCTGGGCCTTGCCCATAGAGGAGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000565584.1 ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000663736.1 ENST00000664080.1 ENST00000664557.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS CCA 72 bp | GGCAGGATGAGCATACGAGATACTTCACCTGTGTGCTaGGTGCAGTTATATGTCAAAATCCCACCTGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GRMSIRDTSPVC*VQLYVKIPPVG Trigger: TCCCACAGGTGGGATTTTGACATATAACTGCACCCAGCACACAGGTGAAGTATCTCGTATGCTCATCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565584.1 |
||
| CDS CCA 72 bp | TCACCATCCACCTGGAATATGTCTCAATCTCCTCTATaGGCAAGGCCCAGACTGGAGAATTGGATCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPSTWNMSQSPL*ARPRLENWITC Trigger: GCAAGTGATCCAATTCTCCAGTCTGGGCCTTGCCCATAGAGGAGATTGAGACATATTCCAGGTGGATGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653078.1 ENST00000655262.1 ENST00000666832.1 |
||
| CDS CCA 72 bp | GGCAGGATGAGCATACGAGATACTTCACCTGTGTGCTaGGTGCAGTTATATGTCAAAATCCCACCTGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRMSIRDTSPVC*VQLYVKIPPEC Trigger: GCACTCAGGTGGGATTTTGACATATAACTGCACCCAGCACACAGGTGAAGTATCTCGTATGCTCATCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000664080.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS CAA 72 bp | TTAGGTGTGGAACAGTGGTACATCACAATTTCTCCTTaGTCAGAGCCACATCACCTAGGTGGCTGGCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LGVEQWYITISP*SEPHHLGGWPS Trigger: ACTGGGCCAGCCACCTAGGTGATGTGGCTCTGACAAAGGAGAAATTGTGATGTACCACTGTTCCACACCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654102.1 ENST00000658707.1 ENST00000663736.1 ENST00000664557.1 |
||
| CDS CAA 72 bp | CAGGACCCAGGCGGGAGGTTCTCATGCCCTAGGTGTTaGTCTCAGCCATACGTCATATTACCAAATATATGC | + |
|
Preference number: 6 (lower is better) Translates to: QDPGGRFSCPRC*SQPYVILPNIC Trigger: GCATATATTTGGTAATATGACGTATGGCTGAGACAAACACCTAGGGCATGAGAACCTCCCGCCTGGGTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658973.1 ENST00000664557.1 |
||
| CDS GCA 72 bp | AGTGATGTTTCACAATGCTCCCTGTGGGAAAAGACCTaGCAGAAAAGACACATCACCTGGTTACTGGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SDVSQCSLWEKT*QKRHITWLLGR Trigger: TCTGCCCAGTAACCAGGTGATGTGTCTTTTCTGGCAGGTCTTTTCCCACAGGGAGCATTGTGAAACATCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000565584.1 ENST00000654102.1 ENST00000658707.1 ENST00000663736.1 ENST00000664557.1 |
||
| CDS CAA 72 bp | TGCAGGGCCCAGGCAAACAAGGAGAGTCATAACACCTaGGTGCTAAGTTTAGTGATATGTTACGATCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CRAQANKESHNT*VLSLVICYDPH Trigger: GTGGGGATCGTAACATATCACTAAACTTAGCACCAAGGTGTTATGACTCTCCTTGTTTGCCTGGGCCCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658973.1 ENST00000664557.1 |
||
| CDS CAA 72 bp | TGTGAGCAAGAGCCAGGCAAGAGACTCACATCACTTTaGTGCTGGGCCACTATCTTTTGTGTGAGCAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: CEQEPGKRLTSL*CWATIFCVSRT Trigger: TGTTCTGCTCACACAAAAGATAGTGGCCCAGCACAAAAGTGATGTGAGTCTCTTGCCTGGCTCTTGCTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666832.1 |
||
| CDS CAA 72 bp | GAAAATTGGTACAGGGATTTGTCACAATGTCCCCTTTaGGTGGTGCACAGGCAGGTGAGGAGAGTCACATCA | + |
|
Preference number: 6 (lower is better) Translates to: ENWYRDLSQCPL*VVHRQVRRVTS Trigger: TGATGTGACTCTCCTCACCTGCCTGTGCACCACCAAAAGGGGACATTGTGACAAATCCCTGTACCAATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666832.1 |
||
| CDS CAA 90 bp | ACAACATTTGGGTGCTGGGCTCAGAGATATGCCACAATCCCTTTTTaGGGCATGTCTCCTGGTTACTGGGCAGAGCTATATGTCACAATC | + |
|
Preference number: 6 (lower is better) Translates to: TTFGCWAQRYATIPF*GMSPGYWAELYVTI Trigger: GATTGTGACATATAGCTCTGCCCAGTAACCAGGAGACATGCCCAAAAAAGGGATTGTGGCATATCTCTGAGCCCAGCACCCAAATGTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658995.1 |
||
| CDS TCA 72 bp | GGCCCTATGATATGTAACAATCCCCCTCCATTTGCATaGCCTGTGGGAAGATCTAGGGCTAGGATTCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: GPMICNNPPPFA*PVGRSRARIHN Trigger: ATTGTGAATCCTAGCCCTAGATCTTCCCACAGGTCATGCAAATGGAGGGGGATTGTTACATATCATAGGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000664080.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS TCA 72 bp | TTATATGTCAAAATCCCACCTGAGTGCTGTGACGGGTaGTATGTCACAATGCCTTCTATGGGCATGGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LYVKIPPECCDG*YVTMPSMGMAQ Trigger: CTGAGCCATGCCCATAGAAGGCATTGTGACATATCACCCGTCACAGCACTCAGGTGGGATTTTGACATATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000664080.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS GCA 72 bp | TTTGGCAGGATGAGCATACGAGATACTTCACCTGTGTaGTGGGTGCAGTTATATGTCAAAATCCCACCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FGRMSIRDTSPV*WVQLYVKIPPV Trigger: CACAGGTGGGATTTTGACATATAACTGCACCCAGCACACAGGTGAAGTATCTCGTATGCTCATCCTGCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565584.1 |
||
| CDS GCA 72 bp | GACAGAAAAGAAGAGTCACATCTCCTGGTTGATGGATaGAGAGATAAGCCAAAAGACTCCTTGTGGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: DRKEESHLLVDG*RDKPKDSLWPG Trigger: TCCTGGCCACAAGGAGTCTTTTGGCTTATCTCTGCATCCATCAACCAGGAGATGTGACTCTTCTTTTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658973.1 ENST00000664557.1 |
||
| CDS GCA 72 bp | CATCACCCAGATAATGGGCCTAGCAATATATCACAATaGCCCCTGATGGAAGGGCAAAGACAAGAAAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: HHPDNGPSNISQ*PLMEGQRQESH Trigger: GTGACTTTCTTGTCTTTGCCCTTCCATCAGGGGGCATTGTGATATATTGCTAGGCCCATTATCTGGGTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666832.1 |
||
| CDS CCA 72 bp | GAATTCTTCACCTGGAATATGTCTCAATCTCCTCTATaGGCAAGGCCCAGACTGGAGAATTGGATCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: EFFTWNMSQSPL*ARPRLENWITC Trigger: GCAAGTGATCCAATTCTCCAGTCTGGGCCTTGCCCATAGAGGAGATTGAGACATATTCCAGGTGAAGAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000565584.1 ENST00000654102.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000663736.1 ENST00000664080.1 |
||
| CDS CCA 72 bp | ATTTGCATGACCTGGAATATGTCTCAATCTCCTCTATaGGCAAGGCCCAGACTGGAGAATTGGATCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ICMTWNMSQSPL*ARPRLENWITC Trigger: GCAAGTGATCCAATTCTCCAGTCTGGGCCTTGCCCATAGAGGAGATTGAGACATATTCCAGGTCATGCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664557.1 ENST00000671247.1 |
||
| CDS CAA 90 bp | CCAAATATATGCAGGGCCCAGGCAAACAAGGAGAGTCATAACACCTaGGTGCTAAGTTTAGTGATATGTTACGATCCCCACTTTTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PNICRAQANKESHNT*VLSLVICYDPHFWQ Trigger: CTGCCAAAAGTGGGGATCGTAACATATCACTAAACTTAGCACCAAGGTGTTATGACTCTCCTTGTTTGCCTGGGCCCTGCATATATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658973.1 ENST00000664557.1 |
||
| CDS TCA 72 bp | ATAGGTCAACATCACACCTGTGGCTGGATCTACATATaGCATTCCAACTGCGGACTGTGTCCATGTACAAGA | + |
|
Preference number: 6 (lower is better) Translates to: IGQHHTCGWIYI*HSNCGLCPCTR Trigger: TCTTGTACATGGACACAGTCCGCAGTTGGAATGTCATATGTAGATCCAGCCACAGGTGTGATGTTGACCTAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000565584.1 ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000664080.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS GCA 72 bp | CTATGGGCAAGGCCCAGACTGGAGAATTGGATCACTTaGATGCAGGGTCCGGTGACATATTATAATATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LWARPRLENWIT*MQGPVTYYNIF Trigger: GAAAATATTATAATATGTCACCGGACCCTGCATGCAAGTGATCCAATTCTCCAGTCTGGGCCTTGCCCATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000565584.1 ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000663736.1 ENST00000664080.1 ENST00000664557.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS TCA 72 bp | GACTGGAGAATTGGATCACTTGCATGCAGGGTCCGGTaGCATATTATAATATTTTCTCTAGGCACAGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DWRIGSLACRVR*HIIIFSLGTAQ Trigger: CTGAGCTGTGCCTAGAGAAAATATTATAATATGTCACCGGACCCTGCATGCAAGTGATCCAATTCTCCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000565584.1 ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000663736.1 ENST00000664080.1 ENST00000664557.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS GCA 72 bp | TGTTTGTCTCAGCCATACGTCATATTACCAAATATATaGAGGGCCCAGGCAAACAAGGAGAGTCATAACACC | + |
|
Preference number: 6 (lower is better) Translates to: CLSQPYVILPNI*RAQANKESHNT Trigger: GGTGTTATGACTCTCCTTGTTTGCCTGGGCCCTGCATATATTTGGTAATATGACGTATGGCTGAGACAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658973.1 ENST00000664557.1 |
||
| CDS CCA 72 bp | GTGACGGGTGATATGTCACAATGCCTTCTATGGGCATaGCTCAGGCAGGAGTTTTACATTATTTTTGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VTGDMSQCLLWA*LRQEFYIIFVL Trigger: CAACACAAAAATAATGTAAAACTCCTGCCTGAGCCATGCCCATAGAAGGCATTGTGACATATCACCCGTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000664080.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS CCA 72 bp | AGTGCTGTGACGGGTGATATGTCACAATGCCTTCTATaGGCATGGCTCAGGCAGGAGTTTTACATTATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SAVTGDMSQCLL*AWLRQEFYIIF Trigger: AAAAATAATGTAAAACTCCTGCCTGAGCCATGCCCATAGAAGGCATTGTGACATATCACCCGTCACAGCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000653078.1 ENST00000654102.1 ENST00000655262.1 ENST00000657971.1 ENST00000658384.1 ENST00000658707.1 ENST00000658973.1 ENST00000658995.1 ENST00000664080.1 ENST00000666832.1 ENST00000671247.1 |
||
| CDS CCA 72 bp | TGTAGAACCCAGACAGAAAAGAAGAGTCACATCTCCTaGTTGATGGATGCAGAGATAAGCCAAAAGACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CRTQTEKKSHIS*LMDAEISQKTP Trigger: AGGAGTCTTTTGGCTTATCTCTGCATCCATCAACCAGGAGATGTGACTCTTCTTTTCTGTCTGGGTTCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658973.1 ENST00000664557.1 |
||
| CDS CAA 72 bp | AGATATTTCCCAGTGCTTCTTGTAGGTAGAGCCAATTaGAAATTGGTGAGATGTTGCTTGGGCTGGTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RYFPVLLVGRAN*KLVRCCLGWLV Trigger: GACCAACCAGCCCAAGCAACATCTCACCAATTTCAAATTGGCTCTACCTACAAGAAGCACTGGGAAATATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664557.1 |
||
| CDS TCA 72 bp | GTTCTGGTTCCAGAGATATGTCACAATCTCTCCTATTaGCAAAGCATGGGTAGGAGAGGAGAGTCAAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: VLVPEICHNLSY*QSMGRRGESNE Trigger: TTCATTTGACTCTCCTCTCCTACCCATGCTTTGTCAATAGGAGAGATTGTGACATATCTCTGGAACCAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654102.1 ENST00000658384.1 |
||
| CDS CAA 72 bp | GCAGAGACCATTCAGGAGAGTCACATTACCTTAATGTaGGACCCAGCCATATATCACAATACACAGCATATC | + |
|
Preference number: 6 (lower is better) Translates to: AETIQESHITLM*DPAIYHNTQHI Trigger: GATATGCTGTGTATTGTGATATATGGCTGGGTCCAACATTAAGGTAATGTGACTCTCCTGAATGGTCTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664557.1 |
||
| CDS CAA 72 bp | GTGCTAGGTTCAGCGATATATCACAATCCCTTAATGTaGGACCCAGCCATATATCACAATACACAGCATATC | + |
|
Preference number: 6 (lower is better) Translates to: VLGSAIYHNPLM*DPAIYHNTQHI Trigger: GATATGCTGTGTATTGTGATATATGGCTGGGTCCAACATTAAGGGATTGTGATATATCGCTGAACCTAGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657971.1 ENST00000658973.1 |
||
| CDS TCA 72 bp | TCACAATACACAATAAATGCAGGGCTCATGAAAAGATaGGAGTCAAATCTCTTAGGTGTGGAACAGTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SQYTINAGLMKR*ESNLLGVEQWY Trigger: GTACCACTGTTCCACACCTAAGAGATTTGACTCTCATCTTTTCATGAGCCCTGCATTTATTGTGTATTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654102.1 ENST00000658707.1 ENST00000663736.1 ENST00000664557.1 |
||
| CDS CCA 72 bp | CTCAAGCCTAGCTATAATAGTCAACATATCTTTTATTaGCTGGATCCAGGTATGAGAGTTATCAATGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LKPSYNSQHIFY*LDPGMRVINVP Trigger: AGGCACATTGATAACTCTCATACCTGGATCCAGCCAATAAAAGATATGTTGACTATTATAGCTAGGCTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653078.1 ENST00000654102.1 |
||
| CDS GCA 72 bp | TGTTGGATCAAGCCATATGTCACAATACACAATAAATaGAGGGCTCATGAAAAGATGAGAGTCAAATCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CWIKPYVTIHNK*RAHEKMRVKSL Trigger: AAGAGATTTGACTCTCATCTTTTCATGAGCCCTGCATTTATTGTGTATTGTGACATATGGCTTGATCCAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654102.1 ENST00000658707.1 ENST00000663736.1 ENST00000664557.1 |
||