Pregenerated sensors for LINC01857 (Homo sapiens)

Ensembl gene IDs: ENSG00000224137

Ensembl transcript IDs: ENST00000429730.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GGCTGGGAAGTCCAAGATGAAGGCACCAGCAGGTTTGTTGCCTGGTaGGGGCCCAGTGTTTGCTTTCATGAACACTGCATCCTCAGGAGG	+
Preference number: 5 (lower is better) Translates to: GWEVQDEGTSRFVAW*GPSVCFHEHCILRR Trigger: CCTCCTGAGGATGCAGTGTTCATGAAAGCAAACACTGGGCCCTCACCAGGCAACAAACCTGCTGGTGCCTTCATCTTGGACTTCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429730.1
CDS CAA 72 bp	GCTGGGAAGTCCAAGATGAAGGCACCAGCAGGTTTGTaGCCTGGTGAGGGCCCAGTGTTTGCTTTCATGAAC	+
Preference number: 6 (lower is better) Translates to: AGKSKMKAPAGL*PGEGPVFAFMN Trigger: GTTCATGAAAGCAAACACTGGGCCCTCACCAGGCAACAAACCTGCTGGTGCCTTCATCTTGGACTTCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429730.1
CDS GCA 72 bp	CCAGGCAGGTGGTGCAAAATAGCGGAAACTGTTAGATaGAAGAGTAGGGATGCTGGGGTGGTGATGAACTGG	+
Preference number: 6 (lower is better) Translates to: PGRWCKIAETVR*KSRDAGVVMNW Trigger: CCAGTTCATCACCACCCCAGCATCCCTACTCTTGCATCTAACAGTTTCCGCTATTTTGCACCACCTGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429730.1
CDS CAA 90 bp	ATAGTTCCGAAGGCTGGGAAGTCCAAGATGAAGGCACCAGCAGGTTaGTTGCCTGGTGAGGGCCCAGTGTTTGCTTTCATGAACACTGCA	+
Preference number: 6 (lower is better) Translates to: IVPKAGKSKMKAPAG*LPGEGPVFAFMNTA Trigger: TGCAGTGTTCATGAAAGCAAACACTGGGCCCTCACCAGGCAACAAACCTGCTGGTGCCTTCATCTTGGACTTCCCAGCCTTCGGAACTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429730.1

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