Pregenerated sensors for LINC01854 (Homo sapiens)
Ensembl gene IDs: ENSG00000204460Ensembl transcript IDs: ENST00000375987.3
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTCTGTGAGCAGGGCCCAGGCAGGAGCCTTCCATCACCCAGGTGTTaGGCCCAGCATTATGTCACAATACCCACAGTATGTGGGACCAAG | + |
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Preference number: 5 (lower is better) Translates to: LCEQGPGRSLPSPRC*AQHYVTIPTVCGTK Trigger: CTTGGTCCCACATACTGTGGGTATTGTGACATAATGCTGGGCCCAACACCTGGGTGATGGAAGGCTCCTGCCTGGGCCCTGCTCACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS TCA 90 bp | GCAAGAGACTCACATCACCTAGGTGAGGGGTCCAGAGATATGTCATaGGGCCCCCTTGTGGGCAGGGCTCAGGAAGGAGAGGTAAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: ARDSHHLGEGSRDMS*GPLVGRAQEGEVSH Trigger: GTGACTTACCTCTCCTTCCTGAGCCCTGCCCACAAGGGGGCCTCATGACATATCTCTGGACCCCTCACCTAGGTGATGTGAGTCTCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS TCA 90 bp | GAGGTGCATCCTGCAGGGCAGAGGACACAGCTGGGGCAAAGGCCATaGGGCAAGACTGGGAACAGCACCCAGGGATATGTTACAATCTTC | + |
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Preference number: 5 (lower is better) Translates to: EVHPAGQRTQLGQRP*GKTGNSTQGYVTIF Trigger: GAAGATTGTAACATATCCCTGGGTGCTGTTCCCAGTCTTGCCTCATGGCCTTTGCCCCAGCTGTGTCCTCTGCCCTGCAGGATGCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 90 bp | CCACTGTGGACAGGTTCCAGGAGAAAGAGGAGAGTCCCATCACCTTaGTGCTGGGCCCAGCAATATGTCACAGCACCTTCTCAGGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: PLWTGSRRKRRVPSP*CWAQQYVTAPSQGK Trigger: CTTGCCCTGAGAAGGTGCTGTGACATATTGCTGGGCCCAGCACCAAGGTGATGGGACTCTCCTCTTTCTCCTGGAACCTGTCCACAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 90 bp | CCTAGGTGTTGGGTCCAGCAATATGTCACTATACACCCTGAGGGGTaGGCCCAGGCAAGAGACTCACATCACCTAGGTGAGGGGTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: PRCWVQQYVTIHPEG*AQARDSHHLGEGSR Trigger: TCTGGACCCCTCACCTAGGTGATGTGAGTCTCTTGCCTGGGCCCACCCCTCAGGGTGTATAGTGACATATTGCTGGACCCAACACCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 90 bp | CATCACAGTGGTGCTGGGCCCAGCAATATGTCACAATCCCCACTGTaGACAGGTTCCAGGAGAAAGAGGAGAGTCCCATCACCTTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: HHSGAGPSNMSQSPL*TGSRRKRRVPSPWC Trigger: GCACCAAGGTGATGGGACTCTCCTCTTTCTCCTGGAACCTGTCCACAGTGGGGATTGTGACATATTGCTGGGCCCAGCACCACTGTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 90 bp | CAGAATGCAGTTCCTTGCTGCTGTAGAAGTGAGGTTCCCTTTTGTTaGCTATCTGCTGGGATCCCCATCAACACTTTCTGTTCACTTGAT | + |
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Preference number: 5 (lower is better) Translates to: QNAVPCCCRSEVPFC*LSAGIPINTFCSLD Trigger: ATCAAGTGAACAGAAAGTGTTGATGGGGATCCCAGCAGATAGCCAACAAAAGGGAACCTCACTTCTACAGCAGCAAGGAACTGCATTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS TCA 90 bp | TTGTTGGCTATCTGCTGGGATCCCCATCAACACTTTCTGTTCACTTaGTTCCCTGTTGTATTGTACACTTCATCTTCAAATGGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LLAICWDPHQHFLFT*FPVVLYTSSSNGSS Trigger: GCTGCTGCCATTTGAAGATGAAGTGTACAATACAACAGGGAATCAAGTGAACAGAAAGTGTTGATGGGGATCCCAGCAGATAGCCAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 90 bp | TCTCCTTGTCCTTCCTGTGCAGATACTCTGGCTAGTTTTCTCTTGTaGGTTGCAGTTTCTTCAGTGGTTCTTGGTCTGGATTTATTTTCA | + |
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Preference number: 5 (lower is better) Translates to: SPCPSCADTLASFLL*VAVSSVVLGLDLFS Trigger: TGAAAATAAATCCAGACCAAGAACCACTGAAGAAACTGCAACCCACAAGAGAAAACTAGCCAGAGTATCTGCACAGGAAGGACAAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 90 bp | CTACAGACTCCAGAAAATAATCTGCTTCCAAGTTCATTAGGTTTTTaGCAGAATGCAGTTCCTTGCTGCTGTAGAAGTGAGGTTCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: LQTPENNLLPSSLGF*QNAVPCCCRSEVPF Trigger: AAAGGGAACCTCACTTCTACAGCAGCAAGGAACTGCATTCTGCCAAAAACCTAATGAACTTGGAAGCAGATTATTTTCTGGAGTCTGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 90 bp | GTTATTATAAAGAGAAGTCTCCTTGTCCTTCCTGTGCAGATACTCTaGCTAGTTTTCTCTTGTGGGTTGCAGTTTCTTCAGTGGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: VIIKRSLLVLPVQIL*LVFSCGLQFLQWFL Trigger: CAAGAACCACTGAAGAAACTGCAACCCACAAGAGAAAACTAGCCAGAGTATCTGCACAGGAAGGACAAGGAGACTTCTCTTTATAATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 90 bp | TCTGTTCACTTGATTCCCTGTTGTATTGTACACTTCATCTTCAAATaGCAGCAGCCTCTTAGTCTTCCTCACTCTTCAAGTCTCTATTCA | + |
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Preference number: 5 (lower is better) Translates to: SVHLIPCCIVHFIFK*QQPLSLPHSSSLYS Trigger: TGAATAGAGACTTGAAGAGTGAGGAAGACTAAGAGGCTGCTGCCATTTGAAGATGAAGTGTACAATACAACAGGGAATCAAGTGAACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS GCA 72 bp | GAGTGGGAGGGAGCCACACGGAGCAGAGGTGCATCCTaGAGGGCAGAGGACACAGCTGGGGCAAAGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: EWEGATRSRGAS*RAEDTAGAKAM Trigger: CATGGCCTTTGCCCCAGCTGTGTCCTCTGCCCTGCAGGATGCACCTCTGCTCCGTGTGGCTCCCTCCCACTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS GCA 72 bp | AGAGTGAGAGTGGGAGGGAGCCACACGGAGCAGAGGTaGATCCTGCAGGGCAGAGGACACAGCTGGGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: RVRVGGSHTEQR*ILQGRGHSWGK Trigger: TTTGCCCCAGCTGTGTCCTCTGCCCTGCAGGATGCACCTCTGCTCCGTGTGGCTCCCTCCCACTCTCACTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS TCA 72 bp | GGCTCCAGTCCTGCTCTGGATGCCGGCACACAGCAGTaGATGAGGCATCCACATTCATGGCCCCGTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GSSPALDAGTQQ*MRHPHSWPRLL Trigger: CAGCAGACGGGGCCATGAATGTGGATGCCTCATTCACTGCTGTGTGCCGGCATCCAGAGCAGGACTGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS TCA 72 bp | CCAGTCCTGCTCTGGATGCCGGCACACAGCAGTGAATaGGGCATCCACATTCATGGCCCCGTCTGCTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: PVLLWMPAHSSE*GIHIHGPVCCW Trigger: CCAACAGCAGACGGGGCCATGAATGTGGATGCCTCATTCACTGCTGTGTGCCGGCATCCAGAGCAGGACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS TCA 72 bp | TCACATCACCTAGGTGAGGGGTCCAGAGATATGTCATaGGGCCCCCTTGTGGGCAGGGCTCAGGAAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: SHHLGEGSRDMS*GPLVGRAQEGE Trigger: CTCTCCTTCCTGAGCCCTGCCCACAAGGGGGCCTCATGACATATCTCTGGACCCCTCACCTAGGTGATGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 72 bp | CCCAGGCACGAGAGGAGAGTCACATCACAGTGGTGCTaGGCCCAGCAATATGTCACAATCCCCACTGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: PRHERRVTSQWC*AQQYVTIPTVD Trigger: GTCCACAGTGGGGATTGTGACATATTGCTGGGCCCAGCACCACTGTGATGTGACTCTCCTCTCGTGCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CAA 72 bp | GCAGGGCCCAGGCAGGAGCCTTCCATCACCCAGGTGTaGGGCCCAGCATTATGTCACAATACCCACAGTATG | + |
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Preference number: 6 (lower is better) Translates to: AGPRQEPSITQV*GPALCHNTHSM Trigger: CATACTGTGGGTATTGTGACATAATGCTGGGCCCAACACCTGGGTGATGGAAGGCTCCTGCCTGGGCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS TCA 72 bp | TTCATGGCCCCGTCTGCTGTTGGAAGACACACATCATaGAGAAGCAGCGCTGCAGAGCCAGGGTACAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: FMAPSAVGRHTS*RSSAAEPGYSG Trigger: CCCACTGTACCCTGGCTCTGCAGCGCTGCTTCTTCATGATGTGTGTCTTCCAACAGCAGACGGGGCCATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 72 bp | TCCAGGAGAAAGAGGAGAGTCCCATCACCTTGGTGCTaGGCCCAGCAATATGTCACAGCACCTTCTCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SRRKRRVPSPWC*AQQYVTAPSQG Trigger: GCCCTGAGAAGGTGCTGTGACATATTGCTGGGCCCAGCACCAAGGTGATGGGACTCTCCTCTTTCTCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 72 bp | CAGGGCCCAGGCAGGAGCCTTCCATCACCCAGGTGTTaGGCCCAGCATTATGTCACAATACCCACAGTATGT | + |
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Preference number: 6 (lower is better) Translates to: QGPGRSLPSPRC*AQHYVTIPTVC Trigger: ACATACTGTGGGTATTGTGACATAATGCTGGGCCCAACACCTGGGTGATGGAAGGCTCCTGCCTGGGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CAA 90 bp | CAGCACCTTCTCAGGGCAAGGCCAAGGCAAATGTGTAACTTCGACTaGGTGTTGGGGCCAGCAATAGGTCACAATCTCCCCTGTGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: QHLLRARPRQMCNFD*VLGPAIGHNLPCGQ Trigger: CTGCCCACAGGGGAGATTGTGACCTATTGCTGGCCCCAACACCAAGTCGAAGTTACACATTTGCCTTGGCCTTGCCCTGAGAAGGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS GCA 72 bp | GGTTCCAGGAGAAAGAGGAGAGTCCCATCACCTTGGTaGTGGGCCCAGCAATATGTCACAGCACCTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GSRRKRRVPSPW*WAQQYVTAPSQ Trigger: CTGAGAAGGTGCTGTGACATATTGCTGGGCCCAGCACCAAGGTGATGGGACTCTCCTCTTTCTCCTGGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS TCA 72 bp | GAGAGGAGAGTCACATCACCTAGGTGCTCGGCCCAGTaGTACATCACAATTTCTCCTTGGGCAGAGCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: ERRVTSPRCSAQ*YITISPWAEPS Trigger: GCTTGGCTCTGCCCAAGGAGAAATTGTGATGTATCACTGGGCCGAGCACCTAGGTGATGTGACTCTCCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 72 bp | ACAGGTTCCAGGAGAAAGAGGAGAGTCCCATCACCTTaGTGCTGGGCCCAGCAATATGTCACAGCACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TGSRRKRRVPSP*CWAQQYVTAPS Trigger: AGAAGGTGCTGTGACATATTGCTGGGCCCAGCACCAAGGTGATGGGACTCTCCTCTTTCTCCTGGAACCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 72 bp | GGAACAGCACCCAGGGATATGTTACAATCTTCCCCATaGGCAGGGTGCAGGCAGAACAGGAGAGTCACATCA | + |
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Preference number: 6 (lower is better) Translates to: GTAPRDMLQSSP*AGCRQNRRVTS Trigger: TGATGTGACTCTCCTGTTCTGCCTGCACCCTGCCCATGGGGAAGATTGTAACATATCCCTGGGTGCTGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CAA 72 bp | CTCAGGGCAAGGCCAAGGCAAATGTGTAACTTCGACTaGGTGTTGGGGCCAGCAATAGGTCACAATCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LRARPRQMCNFD*VLGPAIGHNLP Trigger: GGGGAGATTGTGACCTATTGCTGGCCCCAACACCAAGTCGAAGTTACACATTTGCCTTGGCCTTGCCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CAA 90 bp | CTTCTCAGGGCAAGGCCAAGGCAAATGTGTAACTTCGACTTGGTGTaGGGGCCAGCAATAGGTCACAATCTCCCCTGTGGGCAGAACCTT | + |
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Preference number: 6 (lower is better) Translates to: LLRARPRQMCNFDLV*GPAIGHNLPCGQNL Trigger: AAGGTTCTGCCCACAGGGGAGATTGTGACCTATTGCTGGCCCCAACACCAAGTCGAAGTTACACATTTGCCTTGGCCTTGCCCTGAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS TCA 72 bp | GGTAGGGATGTCAGCACAGGGACTGAAGGTCAGTGCTaGCTTACAGAAGGAAGAGAAAGGAACCAGCATGTG | + |
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Preference number: 6 (lower is better) Translates to: GRDVSTGTEGQC*LTEGRERNQHV Trigger: CACATGCTGGTTCCTTTCTCTTCCTTCTGTAAGTCAGCACTGACCTTCAGTCCCTGTGCTGACATCCCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 72 bp | TTGGGCCCAGCATTATGTCACAATACCCACAGTATGTaGGACCAAGACAAAAGAGGAGTCCCATCACCTAGG | + |
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Preference number: 6 (lower is better) Translates to: LGPALCHNTHSM*DQDKRGVPSPR Trigger: CCTAGGTGATGGGACTCCTCTTTTGTCTTGGTCCCACATACTGTGGGTATTGTGACATAATGCTGGGCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CAA 72 bp | ATTCCCACATGTGCAGAGAACAGGACCAGGAGTGAGTaGCCTAAAGAGAGGCTAAGATCCCCAGCTAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: IPTCAENRTRSE*PKERLRSPASN Trigger: ATTGCTAGCTGGGGATCTTAGCCTCTCTTTAGGCAACTCACTCCTGGTCCTGTTCTCTGCACATGTGGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 72 bp | GTTCCTTGCTGCTGTAGAAGTGAGGTTCCCTTTTGTTaGCTATCTGCTGGGATCCCCATCAACACTTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VPCCCRSEVPFC*LSAGIPINTFC Trigger: ACAGAAAGTGTTGATGGGGATCCCAGCAGATAGCCAACAAAAGGGAACCTCACTTCTACAGCAGCAAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 72 bp | CCTTCCTGTGCAGATACTCTGGCTAGTTTTCTCTTGTaGGTTGCAGTTTCTTCAGTGGTTCTTGGTCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: PSCADTLASFLL*VAVSSVVLGLD Trigger: ATCCAGACCAAGAACCACTGAAGAAACTGCAACCCACAAGAGAAAACTAGCCAGAGTATCTGCACAGGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CAA 72 bp | TGTCCTTCCTGTGCAGATACTCTGGCTAGTTTTCTCTaGTGGGTTGCAGTTTCTTCAGTGGTTCTTGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: CPSCADTLASFL*WVAVSSVVLGL Trigger: CAGACCAAGAACCACTGAAGAAACTGCAACCCACAAGAGAAAACTAGCCAGAGTATCTGCACAGGAAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 72 bp | AAGAGAAGTCTCCTTGTCCTTCCTGTGCAGATACTCTaGCTAGTTTTCTCTTGTGGGTTGCAGTTTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: KRSLLVLPVQIL*LVFSCGLQFLQ Trigger: CTGAAGAAACTGCAACCCACAAGAGAAAACTAGCCAGAGTATCTGCACAGGAAGGACAAGGAGACTTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS GCA 72 bp | CCAAGTTCATTAGGTTTTTGGCAGAATGCAGTTCCTTaGTGCTGTAGAAGTGAGGTTCCCTTTTGTTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: PSSLGFWQNAVP*CCRSEVPFCWL Trigger: TAGCCAACAAAAGGGAACCTCACTTCTACAGCAGCAAGGAACTGCATTCTGCCAAAAACCTAATGAACTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CAA 72 bp | CCTGTGCAGATACTCTGGCTAGTTTTCTCTTGTGGGTaGCAGTTTCTTCAGTGGTTCTTGGTCTGGATTTAT | + |
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Preference number: 6 (lower is better) Translates to: PVQILWLVFSCG*QFLQWFLVWIY Trigger: ATAAATCCAGACCAAGAACCACTGAAGAAACTGCAACCCACAAGAGAAAACTAGCCAGAGTATCTGCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CAA 90 bp | TTTGTTGGCTATCTGCTGGGATCCCCATCAACACTTTCTGTTCACTaGATTCCCTGTTGTATTGTACACTTCATCTTCAAATGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FVGYLLGSPSTLSVH*IPCCIVHFIFKWQQ Trigger: CTGCTGCCATTTGAAGATGAAGTGTACAATACAACAGGGAATCAAGTGAACAGAAAGTGTTGATGGGGATCCCAGCAGATAGCCAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CAA 72 bp | ATCCCCATCAACACTTTCTGTTCACTTGATTCCCTGTaGTATTGTACACTTCATCTTCAAATGGCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: IPINTFCSLDSL*YCTLHLQMAAA Trigger: GGCTGCTGCCATTTGAAGATGAAGTGTACAATACAACAGGGAATCAAGTGAACAGAAAGTGTTGATGGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CAA 90 bp | CTTGTCCTTCCTGTGCAGATACTCTGGCTAGTTTTCTCTTGTGGGTaGCAGTTTCTTCAGTGGTTCTTGGTCTGGATTTATTTTCATTCA | + |
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Preference number: 6 (lower is better) Translates to: LVLPVQILWLVFSCG*QFLQWFLVWIYFHS Trigger: TGAATGAAAATAAATCCAGACCAAGAACCACTGAAGAAACTGCAACCCACAAGAGAAAACTAGCCAGAGTATCTGCACAGGAAGGACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CCA 72 bp | CCAGAAAATAATCTGCTTCCAAGTTCATTAGGTTTTTaGCAGAATGCAGTTCCTTGCTGCTGTAGAAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: PENNLLPSSLGF*QNAVPCCCRSE Trigger: CTCACTTCTACAGCAGCAAGGAACTGCATTCTGCCAAAAACCTAATGAACTTGGAAGCAGATTATTTTCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS TCA 72 bp | ATCTGCTGGGATCCCCATCAACACTTTCTGTTCACTTaGTTCCCTGTTGTATTGTACACTTCATCTTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: ICWDPHQHFLFT*FPVVLYTSSSN Trigger: ATTTGAAGATGAAGTGTACAATACAACAGGGAATCAAGTGAACAGAAAGTGTTGATGGGGATCCCAGCAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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| CDS CAA 72 bp | GTTTTCTCTTGTGGGTTGCAGTTTCTTCAGTGGTTCTaGGTCTGGATTTATTTTCATTCATTCTGCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: VFSCGLQFLQWF*VWIYFHSFCLV Trigger: CACCAAGCAGAATGAATGAAAATAAATCCAGACCAAGAACCACTGAAGAAACTGCAACCCACAAGAGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375987.3 |
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