Pregenerated sensors for LINC01853 (Homo sapiens)

Ensembl gene IDs: ENSG00000224028

Ensembl transcript IDs: ENST00000417715.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CATCAGGTGCTTCAGCAGACTGTTCAGGTTCCAAGTTCTGGAGACTaGAAGTCAAATATCAAGGTACTGGTGTCTTGCAAGGGCCTTCTG	+
Preference number: 5 (lower is better) Translates to: HQVLQQTVQVPSSGD*KSNIKVLVSCKGLL Trigger: CAGAAGGCCCTTGCAAGACACCAGTACCTTGATATTTGACTTCCAGTCTCCAGAACTTGGAACCTGAACAGTCTGCTGAAGCACCTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417715.1
CDS TCA 90 bp	GGTACTGGTGTCTTGCAAGGGCCTTCTGAACAGAGATCACTAGACTaGAAAATCAATCCATTTGTATCAAAGTCCTCCACAGAGTGTCCT	+
Preference number: 5 (lower is better) Translates to: GTGVLQGPSEQRSLD*KINPFVSKSSTECP Trigger: AGGACACTCTGTGGAGGACTTTGATACAAATGGATTGATTTTTCAGTCTAGTGATCTCTGTTCAGAAGGCCCTTGCAAGACACCAGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417715.1
CDS TCA 90 bp	ACTGGAAGTCAAATATCAAGGTACTGGTGTCTTGCAAGGGCCTTCTaGACAGAGATCACTAGACTGAAAAATCAATCCATTTGTATCAAA	+
Preference number: 5 (lower is better) Translates to: TGSQISRYWCLARAF*TEITRLKNQSICIK Trigger: TTTGATACAAATGGATTGATTTTTCAGTCTAGTGATCTCTGTTCAGAAGGCCCTTGCAAGACACCAGTACCTTGATATTTGACTTCCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417715.1
CDS CCA 72 bp	CTTCAGCAGACTGTTCAGGTTCCAAGTTCTGGAGACTaGAAGTCAAATATCAAGGTACTGGTGTCTTGCAAG	+
Preference number: 6 (lower is better) Translates to: LQQTVQVPSSGD*KSNIKVLVSCK Trigger: CTTGCAAGACACCAGTACCTTGATATTTGACTTCCAGTCTCCAGAACTTGGAACCTGAACAGTCTGCTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417715.1
CDS TCA 72 bp	GTCTTGCAAGGGCCTTCTGAACAGAGATCACTAGACTaGAAAATCAATCCATTTGTATCAAAGTCCTCCACA	+
Preference number: 6 (lower is better) Translates to: VLQGPSEQRSLD*KINPFVSKSST Trigger: TGTGGAGGACTTTGATACAAATGGATTGATTTTTCAGTCTAGTGATCTCTGTTCAGAAGGCCCTTGCAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417715.1
CDS TCA 72 bp	CAAATATCAAGGTACTGGTGTCTTGCAAGGGCCTTCTaGACAGAGATCACTAGACTGAAAAATCAATCCATT	+
Preference number: 6 (lower is better) Translates to: QISRYWCLARAF*TEITRLKNQSI Trigger: AATGGATTGATTTTTCAGTCTAGTGATCTCTGTTCAGAAGGCCCTTGCAAGACACCAGTACCTTGATATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417715.1

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