Pregenerated sensors for LINC01849 (Homo sapiens)
Ensembl gene IDs: ENSG00000234988Ensembl transcript IDs: ENST00000414647.1, ENST00000424342.2, ENST00000656412.1, ENST00000656514.1, ENST00000656519.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGCACGGATCCCTGGTAGATCACGCCCTCGCGTGGCCGCTTCCTTaGGTGACAGCTTGGCCTGTGGGTGCCGGGTTAGTGGAGGATGAG | + |
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Preference number: 5 (lower is better) Translates to: RHGSLVDHALAWPLP*VTAWPVGAGLVEDE Trigger: CTCATCCTCCACTAACCCGGCACCCACAGGCCAAGCTGTCACGCAAGGAAGCGGCCACGCGAGGGCGTGATCTACCAGGGATCCGTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CCA 90 bp | ATGCACAGACCCAGGCACGGATCCCTGGTAGATCACGCCCTCGCGTaGCCGCTTCCTTGCGTGACAGCTTGGCCTGTGGGTGCCGGGTTA | + |
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Preference number: 5 (lower is better) Translates to: MHRPRHGSLVDHALA*PLPCVTAWPVGAGL Trigger: TAACCCGGCACCCACAGGCCAAGCTGTCACGCAAGGAAGCGGCCACGCGAGGGCGTGATCTACCAGGGATCCGTGCCTGGGTCTGTGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CCA 90 bp | CTGGTAGATCACGCCCTCGCGTGGCCGCTTCCTTGCGTGACAGCTTaGCCTGTGGGTGCCGGGTTAGTGGAGGATGAGTTCCAGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LVDHALAWPLPCVTA*PVGAGLVEDEFQSW Trigger: CCAGCTCTGGAACTCATCCTCCACTAACCCGGCACCCACAGGCCAAGCTGTCACGCAAGGAAGCGGCCACGCGAGGGCGTGATCTACCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS TCA 90 bp | GGTTGGGGAGACAAGGGTAAAGAGGCTTTAATGCCAAGTGGCAGGTaGAGGCTTGAGCAGTGCGGTCCTTGGTCCTCGTGGGGTCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: GWGDKGKEALMPSGR*RLEQCGPWSSWGQH Trigger: ATGCTGACCCCACGAGGACCAAGGACCGCACTGCTCAAGCCTTCACCTGCCACTTGGCATTAAAGCCTCTTTACCCTTGTCTCCCCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS GCA 90 bp | GCAAGCTTGTCATCCACCCGCTTCTTCAAAGGGGTTTCTTCTGGCTaGAGAAGGGAGGATGCACAGACCCAGGCACGGATCCCTGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: ASLSSTRFFKGVSSG*RREDAQTQARIPGR Trigger: TCTACCAGGGATCCGTGCCTGGGTCTGTGCATCCTCCCTTCTGCAGCCAGAAGAAACCCCTTTGAAGAAGCGGGTGGATGACAAGCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CCA 90 bp | TGTGGGGCAATGAAGGCCTGGAGAGCAAAAGCCGCCTGTTCAGGTTaGGATGTAACTTCAGGTCTGTTGGGCATCAGAGCCTGGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: CGAMKAWRAKAACSG*DVTSGLLGIRAWAL Trigger: CAGTGCCCAGGCTCTGATGCCCAACAGACCTGAAGTTACATCCCAACCTGAACAGGCGGCTTTTGCTCTCCAGGCCTTCATTGCCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CCA 90 bp | TATTGCAAGCTTGTCATCCACCCGCTTCTTCAAAGGGGTTTCTTCTaGCTGCAGAAGGGAGGATGCACAGACCCAGGCACGGATCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: YCKLVIHPLLQRGFF*LQKGGCTDPGTDPW Trigger: CCAGGGATCCGTGCCTGGGTCTGTGCATCCTCCCTTCTGCAGCCAGAAGAAACCCCTTTGAAGAAGCGGGTGGATGACAAGCTTGCAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS GCA 90 bp | AAGCTCAGCCAGGGCAGGATCTCCAGCACCAGAACGTGTGTGTTGTaGCGTAGACACTCAACAGATGCTGAGACTTCTGCTCCTCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: KLSQGRISSTRTCVL*RRHSTDAETSAPLE Trigger: TTCCAGAGGAGCAGAAGTCTCAGCATCTGTTGAGTGTCTACGGCACAACACACACGTTCTGGTGCTGGAGATCCTGCCCTGGCTGAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424342.2 ENST00000656519.1 |
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| CDS CCA 90 bp | CAGGATTTCCCAACAGGCCGGATTCTGTTCTATGATGCTAGAACCTaGACACTCAACATCTATCCCCGCAGTTCAGCTGGGGCCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: QDFPTGRILFYDART*TLNIYPRSSAGAST Trigger: GGTGCTGGCCCCAGCTGAACTGCGGGGATAGATGTTGAGTGTCCAGGTTCTAGCATCATAGAACAGAATCCGGCCTGTTGGGAAATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000414647.1 ENST00000424342.2 ENST00000656412.1 ENST00000656514.1 ENST00000656519.1 |
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| CDS GCA 90 bp | CAGACTGATCCAGCCACCCATGTGTCCCACAGGCTGACTGACAACTaGCTGTATAGTCGCCAGCTGGTAACTATATTGAGATCGCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: QTDPATHVSHRLTDN*LYSRQLVTILRSPS Trigger: TGAAGGCGATCTCAATATAGTTACCAGCTGGCGACTATACAGGCAGTTGTCAGTCAGCCTGTGGGACACATGGGTGGCTGGATCAGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CCA 90 bp | AGACACTCAACAGATGCTGAGACTTCTGCTCCTCTGGAAGAACCCTaGGGTCCTGCTCATTCAAGCAATGCACATGGGATGTCCAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: RHSTDAETSAPLEEP*GPAHSSNAHGMSKA Trigger: AGCTTTGGACATCCCATGTGCATTGCTTGAATGAGCAGGACCCCAGGGTTCTTCCAGAGGAGCAGAAGTCTCAGCATCTGTTGAGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424342.2 ENST00000656519.1 |
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| CDS GCA 90 bp | ACCTGGGCACGGGGCTTCCAAGCACTTTCCGTTCACTGTCTCTTGTaGTTTTGGGTACCTAGAAGGTGCATATTATTATTGTTCCCACTG | + |
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Preference number: 5 (lower is better) Translates to: TWARGFQALSVHCLL*FWVPRRCILLLFPL Trigger: CAGTGGGAACAATAATAATATGCACCTTCTAGGTACCCAAAAGCACAAGAGACAGTGAACGGAAAGTGCTTGGAAGCCCCGTGCCCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CCA 90 bp | GAAGGTGCATATTATTATTGTTCCCACTGTGGGGCAATGAAGGCCTaGAGAGCAAAAGCCGCCTGTTCAGGTTGGGATGTAACTTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: EGAYYYCSHCGAMKA*RAKAACSGWDVTSG Trigger: ACCTGAAGTTACATCCCAACCTGAACAGGCGGCTTTTGCTCTCCAGGCCTTCATTGCCCCACAGTGGGAACAATAATAATATGCACCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CCA 90 bp | TGCTTTTGGGTACCTAGAAGGTGCATATTATTATTGTTCCCACTGTaGGGCAATGAAGGCCTGGAGAGCAAAAGCCGCCTGTTCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: CFWVPRRCILLLFPL*GNEGLESKSRLFRL Trigger: CAACCTGAACAGGCGGCTTTTGCTCTCCAGGCCTTCATTGCCCCACAGTGGGAACAATAATAATATGCACCTTCTAGGTACCCAAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CCA 90 bp | TGTTCAGGTTGGGATGTAACTTCAGGTCTGTTGGGCATCAGAGCCTaGGCACTGGAGATCATTTCTGAAATGATGCAGGGGCTACATGTA | + |
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Preference number: 5 (lower is better) Translates to: CSGWDVTSGLLGIRA*ALEIISEMMQGLHV Trigger: TACATGTAGCCCCTGCATCATTTCAGAAATGATCTCCAGTGCCCAGGCTCTGATGCCCAACAGACCTGAAGTTACATCCCAACCTGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656519.1 |
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| CDS GCA 90 bp | AATTCCCTGGATCGCTTAACTTCTCTGAAATTTAATTCCCTCCCTTaGAAAATGGGGCATGCTTATGCCACAGGGACATTGCCACGAAGG | + |
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Preference number: 5 (lower is better) Translates to: NSLDRLTSLKFNSLP*KMGHAYATGTLPRR Trigger: CCTTCGTGGCAATGTCCCTGTGGCATAAGCATGCCCCATTTTGCAAGGGAGGGAATTAAATTTCAGAGAAGTTAAGCGATCCAGGGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CCA 90 bp | AAAAGCATACAATTCGGTTTCATTGAACTTATAAGGAAAGGAAGCTaGGTGCAGCGGGATGTGCCTGTAATCCCAGATACTCCACAGGCT | + |
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Preference number: 5 (lower is better) Translates to: KSIQFGFIELIRKGS*VQRDVPVIPDTPQA Trigger: AGCCTGTGGAGTATCTGGGATTACAGGCACATCCCGCTGCACCCAGCTTCCTTTCCTTATAAGTTCAATGAAACCGAATTGTATGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS TCA 90 bp | ATGTCACTGTTGGAGAGATTAATTTTAAGGGTGACTAATGAGTTATaGGCAATTTGTGTGGGAGCTGACCCAGGGTATCCAGAGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: MSLLERLILRVTNEL*AICVGADPGYPELL Trigger: GAGCAGCTCTGGATACCCTGGGTCAGCTCCCACACAAATTGCTCATAACTCATTAGTCACCCTTAAAATTAATCTCTCCAACAGTGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CCA 72 bp | CCCAGGCACGGATCCCTGGTAGATCACGCCCTCGCGTaGCCGCTTCCTTGCGTGACAGCTTGGCCTGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: PRHGSLVDHALA*PLPCVTAWPVG Trigger: ACCCACAGGCCAAGCTGTCACGCAAGGAAGCGGCCACGCGAGGGCGTGATCTACCAGGGATCCGTGCCTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS GCA 72 bp | TCCCTGGTAGATCACGCCCTCGCGTGGCCGCTTCCTTaGGTGACAGCTTGGCCTGTGGGTGCCGGGTTAGTG | + |
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Preference number: 6 (lower is better) Translates to: SLVDHALAWPLP*VTAWPVGAGLV Trigger: CACTAACCCGGCACCCACAGGCCAAGCTGTCACGCAAGGAAGCGGCCACGCGAGGGCGTGATCTACCAGGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CCA 72 bp | CACGCCCTCGCGTGGCCGCTTCCTTGCGTGACAGCTTaGCCTGTGGGTGCCGGGTTAGTGGAGGATGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: HALAWPLPCVTA*PVGAGLVEDEF Trigger: GAACTCATCCTCCACTAACCCGGCACCCACAGGCCAAGCTGTCACGCAAGGAAGCGGCCACGCGAGGGCGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CCA 72 bp | GTGGGTGCCGGGTTAGTGGAGGATGAGTTCCAGAGCTaGAGGCGCGTTGCAGGCAAAGGGTGTGATGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: VGAGLVEDEFQS*RRVAGKGCDGG Trigger: GCCCCCATCACACCCTTTGCCTGCAACGCGCCTCCAGCTCTGGAACTCATCCTCCACTAACCCGGCACCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CAA 72 bp | ATCCCTGGTAGATCACGCCCTCGCGTGGCCGCTTCCTaGCGTGACAGCTTGGCCTGTGGGTGCCGGGTTAGT | + |
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Preference number: 6 (lower is better) Translates to: IPGRSRPRVAAS*RDSLACGCRVS Trigger: ACTAACCCGGCACCCACAGGCCAAGCTGTCACGCAAGGAAGCGGCCACGCGAGGGCGTGATCTACCAGGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS TCA 72 bp | GACAGCTTGGCCTGTGGGTGCCGGGTTAGTGGAGGATaGGTTCCAGAGCTGGAGGCGCGTTGCAGGCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: DSLACGCRVSGG*VPELEARCRQR Trigger: CCTTTGCCTGCAACGCGCCTCCAGCTCTGGAACTCATCCTCCACTAACCCGGCACCCACAGGCCAAGCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS TCA 72 bp | CGCGTTGCAGGCAAAGGGTGTGATGGGGGCATGGACTaGGTAGGCAATGTGCTCCCCAAGGCTGTGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: RVAGKGCDGGMD*VGNVLPKAVST Trigger: GGTGGACACAGCCTTGGGGAGCACATTGCCTACTCAGTCCATGCCCCCATCACACCCTTTGCCTGCAACGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CAA 90 bp | CTCCAGGGTAAGCAGGCCCTACTCCTAGGTGCCTTCACCGGGCTTTaGCCGGTCGTCTCAGTACTCATTGTGGATTTCTCCCCACCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LQGKQALLLGAFTGL*PVVSVLIVDFSPPG Trigger: ACCTGGTGGGGAGAAATCCACAATGAGTACTGAGACGACCGGCAAAAGCCCGGTGAAGGCACCTAGGAGTAGGGCCTGCTTACCCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000414647.1 ENST00000424342.2 ENST00000656412.1 ENST00000656514.1 ENST00000656519.1 |
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| CDS CAA 90 bp | CTGTGGGGCAATGAAGGCCTGGAGAGCAAAAGCCGCCTGTTCAGGTaGGGATGTAACTTCAGGTCTGTTGGGCATCAGAGCCTGGGCACT | + |
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Preference number: 6 (lower is better) Translates to: LWGNEGLESKSRLFR*GCNFRSVGHQSLGT Trigger: AGTGCCCAGGCTCTGATGCCCAACAGACCTGAAGTTACATCCCAACCTGAACAGGCGGCTTTTGCTCTCCAGGCCTTCATTGCCCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CAA 90 bp | CAGAAGCTCAGCCAGGGCAGGATCTCCAGCACCAGAACGTGTGTGTaGTGCCGTAGACACTCAACAGATGCTGAGACTTCTGCTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QKLSQGRISSTRTCV*CRRHSTDAETSAPL Trigger: CAGAGGAGCAGAAGTCTCAGCATCTGTTGAGTGTCTACGGCACAACACACACGTTCTGGTGCTGGAGATCCTGCCCTGGCTGAGCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424342.2 ENST00000656519.1 |
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| CDS CCA 72 bp | AGAACCCTGGGGTCCTGCTCATTCAAGCAATGCACATaGGATGTCCAAAGCTATTGGGGCAGTTGGGACCCC | + |
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Preference number: 6 (lower is better) Translates to: RTLGSCSFKQCT*DVQSYWGSWDP Trigger: GGGGTCCCAACTGCCCCAATAGCTTTGGACATCCCATGTGCATTGCTTGAATGAGCAGGACCCCAGGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000424342.2 ENST00000656519.1 |
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| CDS CAA 72 bp | AAGCAGGCCCTACTCCTAGGTGCCTTCACCGGGCTTTaGCCGGTCGTCTCAGTACTCATTGTGGATTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KQALLLGAFTGL*PVVSVLIVDFS Trigger: GGAGAAATCCACAATGAGTACTGAGACGACCGGCAAAAGCCCGGTGAAGGCACCTAGGAGTAGGGCCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000414647.1 ENST00000424342.2 ENST00000656412.1 ENST00000656514.1 ENST00000656519.1 |
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| CDS GCA 72 bp | CAGGGCAGGATCTCCAGCACCAGAACGTGTGTGTTGTaGCGTAGACACTCAACAGATGCTGAGACTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: QGRISSTRTCVL*RRHSTDAETSA Trigger: AGCAGAAGTCTCAGCATCTGTTGAGTGTCTACGGCACAACACACACGTTCTGGTGCTGGAGATCCTGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424342.2 ENST00000656519.1 |
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| CDS CCA 72 bp | ATGAAGGCCTGGAGAGCAAAAGCCGCCTGTTCAGGTTaGGATGTAACTTCAGGTCTGTTGGGCATCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: MKAWRAKAACSG*DVTSGLLGIRA Trigger: GGCTCTGATGCCCAACAGACCTGAAGTTACATCCCAACCTGAACAGGCGGCTTTTGCTCTCCAGGCCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CCA 72 bp | GCAGGGGCCCTCCCACCTAGGAATGTATTGTCCGGTTaGGGAGACAAGGGTAAAGAGGCTTTAATGCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: AGALPPRNVLSG*GDKGKEALMPS Trigger: ACTTGGCATTAAAGCCTCTTTACCCTTGTCTCCCCAACCGGACAATACATTCCTAGGTGGGAGGGCCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CAA 72 bp | GCCGCCTGTTCAGGTTGGGATGTAACTTCAGGTCTGTaGGGCATCAGAGCCTGGGCACTGGAGATCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: AACSGWDVTSGL*GIRAWALEIIS Trigger: AGAAATGATCTCCAGTGCCCAGGCTCTGATGCCCAACAGACCTGAAGTTACATCCCAACCTGAACAGGCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CCA 72 bp | CCAACAGGCCGGATTCTGTTCTATGATGCTAGAACCTaGACACTCAACATCTATCCCCGCAGTTCAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PTGRILFYDART*TLNIYPRSSAG Trigger: CCCAGCTGAACTGCGGGGATAGATGTTGAGTGTCCAGGTTCTAGCATCATAGAACAGAATCCGGCCTGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000414647.1 ENST00000424342.2 ENST00000656412.1 ENST00000656514.1 ENST00000656519.1 |
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| CDS CCA 72 bp | ACAGATGCTGAGACTTCTGCTCCTCTGGAAGAACCCTaGGGTCCTGCTCATTCAAGCAATGCACATGGGATG | + |
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Preference number: 6 (lower is better) Translates to: TDAETSAPLEEP*GPAHSSNAHGM Trigger: CATCCCATGTGCATTGCTTGAATGAGCAGGACCCCAGGGTTCTTCCAGAGGAGCAGAAGTCTCAGCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424342.2 ENST00000656519.1 |
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| CDS CAA 72 bp | AATGAAGGCCTGGAGAGCAAAAGCCGCCTGTTCAGGTaGGGATGTAACTTCAGGTCTGTTGGGCATCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: NEGLESKSRLFR*GCNFRSVGHQS Trigger: GCTCTGATGCCCAACAGACCTGAAGTTACATCCCAACCTGAACAGGCGGCTTTTGCTCTCCAGGCCTTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CCA 72 bp | GTAGACACTCAACAGATGCTGAGACTTCTGCTCCTCTaGAAGAACCCTGGGGTCCTGCTCATTCAAGCAATG | + |
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Preference number: 6 (lower is better) Translates to: VDTQQMLRLLLL*KNPGVLLIQAM Trigger: CATTGCTTGAATGAGCAGGACCCCAGGGTTCTTCCAGAGGAGCAGAAGTCTCAGCATCTGTTGAGTGTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424342.2 ENST00000656519.1 |
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| CDS CAA 90 bp | AGAGCAAAAGCCGCCTGTTCAGGTTGGGATGTAACTTCAGGTCTGTaGGGCATCAGAGCCTGGGCACTGGAGATCATTTCTGAAATGATG | + |
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Preference number: 6 (lower is better) Translates to: RAKAACSGWDVTSGL*GIRAWALEIISEMM Trigger: CATCATTTCAGAAATGATCTCCAGTGCCCAGGCTCTGATGCCCAACAGACCTGAAGTTACATCCCAACCTGAACAGGCGGCTTTTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656519.1 |
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| CDS CCA 72 bp | GTACCTAGAAGGTGCATATTATTATTGTTCCCACTGTaGGGCAATGAAGGCCTGGAGAGCAAAAGCCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VPRRCILLLFPL*GNEGLESKSRL Trigger: CAGGCGGCTTTTGCTCTCCAGGCCTTCATTGCCCCACAGTGGGAACAATAATAATATGCACCTTCTAGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CAA 90 bp | ACCACCTGGGCACGGGGCTTCCAAGCACTTTCCGTTCACTGTCTCTaGTGCTTTTGGGTACCTAGAAGGTGCATATTATTATTGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TTWARGFQALSVHCL*CFWVPRRCILLLFP Trigger: TGGGAACAATAATAATATGCACCTTCTAGGTACCCAAAAGCACAAGAGACAGTGAACGGAAAGTGCTTGGAAGCCCCGTGCCCAGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CCA 72 bp | TATTATTATTGTTCCCACTGTGGGGCAATGAAGGCCTaGAGAGCAAAAGCCGCCTGTTCAGGTTGGGATGTA | + |
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Preference number: 6 (lower is better) Translates to: YYYCSHCGAMKA*RAKAACSGWDV Trigger: TACATCCCAACCTGAACAGGCGGCTTTTGCTCTCCAGGCCTTCATTGCCCCACAGTGGGAACAATAATAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CAA 72 bp | TTGTGCTTTTGGGTACCTAGAAGGTGCATATTATTATaGTTCCCACTGTGGGGCAATGAAGGCCTGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LCFWVPRRCILL*FPLWGNEGLES Trigger: GCTCTCCAGGCCTTCATTGCCCCACAGTGGGAACAATAATAATATGCACCTTCTAGGTACCCAAAAGCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CAA 72 bp | GCACGGGGCTTCCAAGCACTTTCCGTTCACTGTCTCTaGTGCTTTTGGGTACCTAGAAGGTGCATATTATTA | + |
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Preference number: 6 (lower is better) Translates to: ARGFQALSVHCL*CFWVPRRCILL Trigger: TAATAATATGCACCTTCTAGGTACCCAAAAGCACAAGAGACAGTGAACGGAAAGTGCTTGGAAGCCCCGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CCA 72 bp | ACGTGGTCTCAGAGCAGTCAGGATTTAGTGGGCACATaGATGGTGAATATTCCAAGCAAGGAGATAAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: TWSQSSQDLVGT*MVNIPSKEIKQ Trigger: TTGCTTTATCTCCTTGCTTGGAATATTCACCATCCATGTGCCCACTAAATCCTGACTGCTCTGAGACCACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CAA 72 bp | GGGGTTAAGACACCGCCTGAGTACAGGATGTCACTGTaGGAGAGATTAATTTTAAGGGTGACTAATGAGTTA | + |
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Preference number: 6 (lower is better) Translates to: GVKTPPEYRMSL*ERLILRVTNEL Trigger: TAACTCATTAGTCACCCTTAAAATTAATCTCTCCAACAGTGACATCCTGTACTCAGGCGGTGTCTTAACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS TCA 72 bp | TTGGAGAGATTAATTTTAAGGGTGACTAATGAGTTATaGGCAATTTGTGTGGGAGCTGACCCAGGGTATCCA | + |
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Preference number: 6 (lower is better) Translates to: LERLILRVTNEL*AICVGADPGYP Trigger: TGGATACCCTGGGTCAGCTCCCACACAAATTGCTCATAACTCATTAGTCACCCTTAAAATTAATCTCTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CCA 72 bp | TTCCAAGCACTTTCCGTTCACTGTCTCTTGTGCTTTTaGGTACCTAGAAGGTGCATATTATTATTGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: FQALSVHCLLCF*VPRRCILLLFP Trigger: TGGGAACAATAATAATATGCACCTTCTAGGTACCCAAAAGCACAAGAGACAGTGAACGGAAAGTGCTTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000424342.2 ENST00000656514.1 ENST00000656519.1 |
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| CDS CCA 72 bp | TTCCCCATGACAAACGTTTTGCCATTTGAGTCAAGTTaGGTAATCTCCGTTCTAGACTTATTTCTGCTACTG | + |
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Preference number: 6 (lower is better) Translates to: FPMTNVLPFESS*VISVLDLFLLL Trigger: CAGTAGCAGAAATAAGTCTAGAACGGAGATTACCCAACTTGACTCAAATGGCAAAACGTTTGTCATGGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656514.1 |
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| CDS CAA 90 bp | CGTGTGTGTTGTGCCGTAGACACTCAACAGATGCTTTGTAAAACATaGCATGTGTGCATGCACGAAGATGAATACAGTAAACGCATAATT | + |
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Preference number: 6 (lower is better) Translates to: RVCCAVDTQQMLCKT*HVCMHEDEYSKRII Trigger: AATTATGCGTTTACTGTATTCATCTTCGTGCATGCACACATGCAATGTTTTACAAAGCATCTGTTGAGTGTCTACGGCACAACACACACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414647.1 |
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| CDS GCA 72 bp | AAATGGTCTTACAACTACTTTCAACAAATCAGGACATaGCCTTGGGCTTGGGTTGAGAAGCTTTTCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: KWSYNYFQQIRT*PWAWVEKLFFF Trigger: AAAGAAGAAAAGCTTCTCAACCCAAGCCCAAGGGCATGTCCTGATTTGTTGAAAGTAGTTGTAAGACCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656412.1 ENST00000656514.1 ENST00000656519.1 |
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| CDS CAA 72 bp | TGTGCCGTAGACACTCAACAGATGCTTTGTAAAACATaGCATGTGTGCATGCACGAAGATGAATACAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: CAVDTQQMLCKT*HVCMHEDEYSK Trigger: TTTACTGTATTCATCTTCGTGCATGCACACATGCAATGTTTTACAAAGCATCTGTTGAGTGTCTACGGCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414647.1 |
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